XM_058884464.1
Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of XM_058884464.1 vs. ExPASy TrEMBL (2024)
Match: tr|G7KSS6|G7KSS6_MEDTR (DUF4228 domain protein OS=Medicago truncatula OX=3880 GN=11435286 PE=4 SV=2) HSP 1 Score: 254.988 bits (650), Expect = 1.295e-84 Identity = 126/158 (79.75%), Postives = 142/158 (89.87%), Query Frame = 0 Query: 1 MGNTCSCSCIPTNSATFEIFNNKLIIKAKKKTATLLDTCGTVREIKLPTKSAELMIELLGHVITPAEVLLRTRRITALHADEELVAGKIYLLVPVSRVNCKASEFEIEIAERGSGRRKGSKTAKVSPVSKLTEND-GGVYCVRQRRWNPVLDPIFESS 157 MGNT SCSCIPT+S++FEIFN K +IK+KKKT TLLDT G +REIKLP KSAELMIEL+GHVITPA+ LLRTRRI AL A+E+LVAGK+YL+VPVSRVNCKASEFEI IAE+ SG+RKG++TAKVSPV KLTEND GGV VRQRRWNPVLDPIFESS Sbjct: 1 MGNTSSCSCIPTDSSSFEIFNEK-VIKSKKKTTTLLDTDGNIREIKLPMKSAELMIELIGHVITPADELLRTRRIIALRANEDLVAGKVYLVVPVSRVNCKASEFEISIAEKRSGKRKGNETAKVSPVKKLTENDNGGVISVRQRRWNPVLDPIFESS 157
BLAST of XM_058884464.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2K3MGC4|A0A2K3MGC4_TRIPR (DUF4228 domain-containing protein OS=Trifolium pratense OX=57577 GN=L195_g045964 PE=4 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 1.616e-84 Identity = 126/159 (79.25%), Postives = 140/159 (88.05%), Query Frame = 0 Query: 1 MGNTCSCSCIPTNSATFEIFNNKLIIKAKKKTATLLDTCGTVREIKLPTKSAELMIELLGHVITPAEVLLRTRRITALHADEELVAGKIYLLVPVSRVNCKASEFEIEIAERG--SGRRKGSKTAKVSPVSKLTENDGGVYCVRQRRWNPVLDPIFESS 157 MGNT S SCIPTN+ T F N+ +IK+KKKTATLLDTCG +REIKLP KSAELMIEL+GHVITPAE LLRTRRI ALHADEELVAGK+YL+VPVSRVN KASEFEI +A++ SG+RKG+K AKVSPVSKLTENDGGVY VRQRRWNPVLDPIFES+ Sbjct: 1 MGNTTSFSCIPTNNCTSFEFVNEKVIKSKKKTATLLDTCGNIREIKLPMKSAELMIELIGHVITPAEDLLRTRRIKALHADEELVAGKVYLVVPVSRVNSKASEFEIAVADQKKVSGKRKGNKMAKVSPVSKLTENDGGVYSVRQRRWNPVLDPIFESA 159
BLAST of XM_058884464.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2XV42|A0A1S2XV42_CICAR (Uncharacterized protein LOC101499148 OS=Cicer arietinum OX=3827 GN=LOC101499148 PE=4 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 4.778e-60 Identity = 104/163 (63.80%), Postives = 119/163 (73.01%), Query Frame = 0 Query: 1 MGNTCSCSCIPTNSATFEIFNNKLIIKAKKKTATLLDTCGTVREIKLPTKSAELMIELLGHVITPAEVLLRTRRITALHADEELVAGKIYLLVPVSRVNCKASEFEIEIAERGSGRRKGSKTAKVSPVSKLTENDGGVYCV-------RQRRWNPVLDPIFES 156 MGNT S SCIP N A+ +I N + KK TATL DT G +REI LP KSAELMIEL+GHVITPA+ + RTRRIT L AD+EL+AGK+YLL PVSRVN KASEFEI IAE+GSG+ + KTAKVSP KLT + V V QRRWNPVL+PIFES Sbjct: 1 MGNTSSFSCIP-NCASVDICNTNGVKGIKKNTATLFDTNGNIREINLPVKSAELMIELIGHVITPADEIRRTRRITPLGADKELLAGKVYLLAPVSRVNSKASEFEILIAEKGSGKGRRDKTAKVSPSPKLTATEDSVNVVCQIPRVRNQRRWNPVLEPIFES 162
BLAST of XM_058884464.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A392SHA7|A0A392SHA7_9FABA (DUF4228 domain protein (Fragment) OS=Trifolium medium OX=97028 PE=4 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 2.480e-49 Identity = 80/94 (85.11%), Postives = 85/94 (90.43%), Query Frame = 0 Query: 50 KSAELMIELLGHVITPAEVLLRTRRITALHADEELVAGKIYLLVPVSRVNCKASEFEIEIAERGSGRRKGSKTAKVSPVSKLTENDGGVYCVRQ 143 KSAELMIEL+GHVI PAE LLRTRRIT L ADEELVAGK+YL VPVSRVN KASEFEI +AE GSG+RKG+K AKVSPVSKLTENDGGVYCVRQ Sbjct: 2 KSAELMIELIGHVIIPAEDLLRTRRITVLSADEELVAGKVYLAVPVSRVNSKASEFEIAMAEEGSGKRKGNKVAKVSPVSKLTENDGGVYCVRQ 95
BLAST of XM_058884464.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371GD41|A0A371GD41_MUCPR (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_29922 PE=4 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.429e-45 Identity = 92/169 (54.44%), Postives = 107/169 (63.31%), Query Frame = 0 Query: 1 MGNTCSCSCIPTNSATFEIFNNKLIIKAKKKTATLLDTCGTVREIKLPTKSAELMIELLGHVITPAEVLLRTRRITALHADEELVAGKIYLLVPVSRVNCKASEFEIEIAERGSGRRKGSKTAKVSP--VSKLTEN-----------DGGVYCVRQRRWNPVLDPIFES 156 MGNT SCSCI + I N + K KTA LLDT G REIKLP KS E+MIE GHVITP + + RT RI+AL ADEELVAGK+YLL+PVSRV+ KAS+FE IAE + R +G TAKVSP +S+ + G Q RWNPVLDPIFES Sbjct: 1 MGNTASCSCICNGVSIGNIMNKRG--KGTTKTAMLLDTGGNTREIKLPAKSGEVMIEEFGHVITPVDEVRRTGRISALLADEELVAGKVYLLLPVSRVHSKASDFERAIAE--TQRTRGHNTAKVSPSLISRPRQRVVQNVVTVTVFPGHQRLGNQPRWNPVLDPIFES 165
BLAST of XM_058884464.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2QC86|A0A0B2QC86_GLYSO (DUF4228 domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_007873 PE=4 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 5.975e-44 Identity = 91/171 (53.22%), Postives = 112/171 (65.50%), Query Frame = 0 Query: 1 MGNTCSCSCIPTNSATFEIFNNKLIIKAKKKTATLLDTCGTVREIKLPTKSAELMIELLGHVITPAEVLLRTRRITALHADEELVAGKIYLLVPVSRVNCKASEFEIEIAERGSGR---RKGSKTAKVSP--VSKLTENDG------GVYCV-----RQRRWNPVLDPIFE 155 MGNT SCSCI ++ I N + KKTA LLD+ G REIKLP KS ELMIE GHV+TP + + RT R++AL ADEELVAGK+YLL+PV+R+N KASEFE+ IAE+ SG ++G+ AKVSP +S+ E D V+ V Q RWNPVLDPI E Sbjct: 1 MGNTTSCSCICISNGVISIGNILKKRRKAKKTAMLLDSDGNTREIKLPIKSGELMIEEFGHVVTPVDEIRRTGRVSALLADEELVAGKVYLLLPVNRINSKASEFEMAIAEKQSGHTKSKRGNNMAKVSPSLISRSNERDEENQVTVSVFPVCPRFGNQVRWNPVLDPIVE 171
BLAST of XM_058884464.1 vs. ExPASy TrEMBL (2024)
Match: tr|C6TGE7|C6TGE7_SOYBN (DUF4228 domain-containing protein OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 1.577e-43 Identity = 91/171 (53.22%), Postives = 112/171 (65.50%), Query Frame = 0 Query: 1 MGNTCSCSCIPTNSATFEIFNNKLIIKAKKKTATLLDTCGTVREIKLPTKSAELMIELLGHVITPAEVLLRTRRITALHADEELVAGKIYLLVPVSRVNCKASEFEIEIAERGSGR---RKGSKTAKVSP--VSKLTENDG------GVYCV-----RQRRWNPVLDPIFE 155 MGNT SCSCI ++ I N + KKTA LLD+ G REIKLP KS ELMIE GHV+TP + + RT R++AL ADEELVAGK+YLL+PV+R+N KASEFE+ IAE+ SG ++G+ AKVSP +S+ E D V+ V Q RWNPVLDPI E Sbjct: 1 MGNTTSCSCICISNGVISIGNILKKRRKAKKTAMLLDSDGNTREIKLPIKSGELMIEEFGHVVTPVDEIRRTGRVSALLADEELVAGKVYLLLPVNRINSKASEFEMAIAEKQSGHTKSKRGNIMAKVSPSLISRSNERDEENQVTVSVFPVCPRFGNQVRWNPVLDPIVE 171
BLAST of XM_058884464.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1NBB7|I1NBB7_SOYBN (DUF4228 domain-containing protein OS=Glycine max OX=3847 GN=100810032 PE=4 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 7.850e-43 Identity = 87/162 (53.70%), Postives = 104/162 (64.20%), Query Frame = 0 Query: 2 GNTCSCSCIPTNSATFEIFNNKLIIKAKK--KTATLLDTCGTVREIKLPTKSAELMIELLGHVITPAEVLLRTRRITALHADEELVAGKIYLLVPVSRVNCKASEFEIEIAERGSG---RRKGSKTAKVSPVSKLTENDGGVYCVR---QRRWNPVLDPIFE 155 N+CSC CIP N ++ K +K KTA LLD+ REIKLP S ELMI+ GHVITP + L RT R++AL ADEELVAGK+YLL+PV+RVN KASEFE+ +AE+ SG R +G+ AKVSP C R Q RWNPVLDPIFE Sbjct: 4 ANSCSCICIP---------NGAILKKIRKGTKTAMLLDSDENPREIKLPATSGELMIQEFGHVITPVDELRRTGRVSALLADEELVAGKVYLLLPVNRVNSKASEFEMALAEKQSGHTKRTRGNNMAKVSP----------SVCPRFGNQVRWNPVLDPIFE 146
BLAST of XM_058884464.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3S087|A0A0S3S087_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G389500 PE=4 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.385e-41 Identity = 92/171 (53.80%), Postives = 109/171 (63.74%), Query Frame = 0 Query: 1 MGNTCSCSCIPTNSATFEIFNNKLIIKAKK--KTATLLDTCGTVREIKLPTKSAELMIELLGHVITPAEVLLRTRRITALHADEELVAGKIYLLVPVSRVNCKASEFEIEIAERGSGRRK---GSKTAKVSP--VSKLTENDG------GVYCVR---QRRWNPVLDPIFE 155 MGN S SCI S I N I+K KK KTA LL++ G REIKLP KS ELMIE GHV+TP + L RT R++AL +EELVAGK+YLL+PVSRV+ KAS+FE+ IAE S +K G+ AKVSP +S+ TE D C R Q RWNPVLD IFE Sbjct: 1 MGNATSSSCI---SNGVSIGN---ILKRKKPTKTAVLLESGGNTREIKLPVKSGELMIEEFGHVVTPLDELRRTGRVSALLPEEELVAGKVYLLLPVSRVHSKASKFEMAIAEAQSSHKKRTRGTNMAKVSPSLISRSTERDAENEVTVSPACPRLGNQVRWNPVLDTIFE 165
BLAST of XM_058884464.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9U9Z7|A0A0L9U9Z7_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0057890 PE=4 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.385e-41 Identity = 92/171 (53.80%), Postives = 109/171 (63.74%), Query Frame = 0 Query: 1 MGNTCSCSCIPTNSATFEIFNNKLIIKAKK--KTATLLDTCGTVREIKLPTKSAELMIELLGHVITPAEVLLRTRRITALHADEELVAGKIYLLVPVSRVNCKASEFEIEIAERGSGRRK---GSKTAKVSP--VSKLTENDG------GVYCVR---QRRWNPVLDPIFE 155 MGN S SCI S I N I+K KK KTA LL++ G REIKLP KS ELMIE GHV+TP + L RT R++AL +EELVAGK+YLL+PVSRV+ KAS+FE+ IAE S +K G+ AKVSP +S+ TE D C R Q RWNPVLD IFE Sbjct: 1 MGNATSSSCI---SNGVSIGN---ILKRKKPTKTAVLLESGGNTREIKLPVKSGELMIEEFGHVVTPLDELRRTGRVSALLPEEELVAGKVYLLLPVSRVHSKASKFEMAIAEAQSSHKKRTRGTNMAKVSPSLISRSTERDAENEVTVSPACPRLGNQVRWNPVLDTIFE 165
BLAST of XM_058884464.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:765559-766059 FORWARD LENGTH=166) HSP 1 Score: 48.521 bits (114), Expect = 2.111e-7 Identity = 36/130 (27.69%), Postives = 62/130 (47.69%), Query Frame = 0 Query: 1 MGNTCSCSCIPTNSATFEIFNNKLIIKAKKKTATLLDTCGTVREIKLPTKSAELMIELLGHVITPAEVLLRTRRITALHADEELVAG--KIYLLVPVSRVNCKASEFEI-EIAERGSGRRKGSKTAKVSP 127 MGN SC+ T+S+ A ++ G VR+I +PTK+AELM+E+ + + + + R+ L AD++L G +Y+ P++R A+ ++ + G R K +VSP Sbjct: 1 MGNYVSCALNKTSSSPL---------------AKVILPDGGVRDIHVPTKAAELMMEMPSYFLVDTKSVKVGRKFIPLAADDDLDLGGCHVYVAFPMTRATSAANASDMARLYLTGKKRTKNCGHRRVSP 115 The following BLAST results are available for this feature:
BLAST of XM_058884464.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-12 (Blastp of Vicia villosa cv. AU Merit v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of XM_058884464.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-12 (Blastp of Vicia villosa cv. AU Merit v1.0 proteins vs UniProt Swissprot) Total hits: 0
BLAST of XM_058884464.1 vs. Araport11
Analysis Date: 2024-08-12 (Blastp of Vicia villosa cv. AU Merit v1.0 proteins vs arabidopsis Araport11) Total hits: 1
InterPro
Analysis Name: InterProScan Analysis for Vicia villosa cv. AU Merit genome v1.0
Date Performed: 2024-08-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >drVicVill.AUMerit.1.0.rna-XM_058884464.1 ID=drVicVill.AUMerit.1.0.rna-XM_058884464.1; Name=XM_058884464.1; organism=Vicia villosa; type=mRNA; length=474bpback to top protein sequence of drVicVill.AUMerit.1.0.rna-XM_058884464.1 >drVicVill.AUMerit.1.0.rna-XM_058884464.1 ID=drVicVill.AUMerit.1.0.rna-XM_058884464.1; Name=drVicVill.AUMerit.1.0.rna-XM_058884464.1; organism=Vicia villosa; type=polypeptide; length=157bpback to top mRNA from alignment at LG6:148151388..148152337- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>drVicVill.AUMerit.1.0.rna-XM_058884464.1 ID=drVicVill.AUMerit.1.0.rna-XM_058884464.1; Name=XM_058884464.1; organism=Vicia villosa; type=mRNA; length=950bp; location=Sequence derived from: LG6:148151388..148152337- (Vicia villosaback to top Coding sequence (CDS) from alignment at LG6:148151388..148152337- >drVicVill.AUMerit.1.0.rna-XM_058884464.1 ID=drVicVill.AUMerit.1.0.rna-XM_058884464.1; Name=XM_058884464.1; organism=Vicia villosa; type=CDS; length=594bp; location=Sequence derived from: LG6:148151388..148152337- (Vicia villosaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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