XM_058928884.1
|
Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of XM_058928884.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D4X1Z5|A0A9D4X1Z5_PEA (SRR1-like domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_056113 PE=3 SV=1) HSP 1 Score: 544.273 bits (1401), Expect = 0.000e+0 Identity = 259/278 (93.17%), Postives = 268/278 (96.40%), Query Frame = 0 Query: 1 MAASAKSLT-----TDGDWTVILPRRGRQRRKDTEVEKISEEKQEPWAPTDSQKDPIRETALMQKMERYITKIENSQFYQTFRDQIETSVLDYFHIVLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLIGNIEVFDPILSVTESRVLEALGCSVMSINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYVSLCKNSPVLNSVKHILAARSFTNEIKIEKIPEDYYNAFHDSSWHFFSPVHESELQFINS 273
MAASAKSLT TDGDWTVILPRRGRQRRKDTEVE+ISEEKQEPWAPTDSQKDPIRETALMQKMERYI+KIENSQFY TF+DQIETS+LDYFHIVLGSET MQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLIGNIEVFDPILSVTESRVLEALGC+VMSINEHGKREAVKPTMFFMPHCEAELY+NLLQANWKPSFLNNMVLFGNSFEEYE +VSLCKNSPVLNSVKHILAAR FTNEIKIEKIP+DYYNAFHDSSWH FSPVHE+ELQFINS
Sbjct: 1 MAASAKSLTNSNCTTDGDWTVILPRRGRQRRKDTEVERISEEKQEPWAPTDSQKDPIRETALMQKMERYISKIENSQFYHTFKDQIETSILDYFHIVLGSETNMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLIGNIEVFDPILSVTESRVLEALGCTVMSINEHGKREAVKPTMFFMPHCEAELYSNLLQANWKPSFLNNMVLFGNSFEEYEQHVSLCKNSPVLNSVKHILAARRFTNEIKIEKIPDDYYNAFHDSSWHIFSPVHETELQFINS 278
BLAST of XM_058928884.1 vs. ExPASy TrEMBL (2024)
Match: tr|G7IYV5|G7IYV5_MEDTR (Putative sensitivity To Red Light Reduced-like, SRR1 OS=Medicago truncatula OX=3880 GN=11419761 PE=3 SV=1) HSP 1 Score: 476.478 bits (1225), Expect = 1.924e-168 Identity = 230/278 (82.73%), Postives = 248/278 (89.21%), Query Frame = 0 Query: 1 MAASAKSLT-----TDGDWTVILPRRGRQRRKDTEVEKISEEKQEPWAPTDSQKDPIRETALMQKMERYITKIENSQFYQTFRDQIETSVLDYFHIVLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLIGNIEVFDPILSVTESRVLEALGCSVMSINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYVSLCKNSPVLNSVKHILAARSFTNEIKIEKIPEDYYNAFHDSSWHFFSPVHESELQFINS 273
MA+SAK+LT TD DWTV+LPRRGRQ+RK EV KI EEKQEPWAPTDSQ DP RETALMQKMER+I+KIENSQFYQTFRDQ+ETSVLDY VLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRD N IG+IEVFDPI+SVTES VLEALGCSVMSINEHGKREA+KPTMFFMPHCEAELY NLL+ANWKP+ L NMVLFGNSFE YE +VSLCK SPV+ V HILAARSFTNE+KIE + +DYYNAFHDSSWHFFSPVHE+ELQ INS
Sbjct: 1 MASSAKTLTNSNCTTDEDWTVVLPRRGRQKRKAPEV-KILEEKQEPWAPTDSQTDPGRETALMQKMERHISKIENSQFYQTFRDQVETSVLDYIPKVLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDFNWIGSIEVFDPIISVTESHVLEALGCSVMSINEHGKREALKPTMFFMPHCEAELYCNLLRANWKPNLLKNMVLFGNSFEAYEQHVSLCKTSPVMYLVGHILAARSFTNEVKIETVSDDYYNAFHDSSWHFFSPVHETELQLINS 277
BLAST of XM_058928884.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2Z3M5|A0A1S2Z3M5_CICAR (Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cicer arietinum OX=3827 GN=LOC101514238 PE=3 SV=1) HSP 1 Score: 471.855 bits (1213), Expect = 1.467e-166 Identity = 224/278 (80.58%), Postives = 243/278 (87.41%), Query Frame = 0 Query: 1 MAASAKSLT-----TDGDWTVILPRRGRQRRKDTEVEKISEEKQEPWAPTDSQKDPIRETALMQKMERYITKIENSQFYQTFRDQIETSVLDYFHIVLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLIGNIEVFDPILSVTESRVLEALGCSVMSINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYVSLCKNSPVLNSVKHILAARSFTNEIKIEKIPEDYYNAFHDSSWHFFSPVHESELQFINS 273
MAASAK+LT T GDWTV+LPRRG+QRRK EV KI EEKQEPWAPTDSQ DP +ETALMQKMERYI +I NSQFY TFRDQI+TSV DYF VLGS+T MQMVIYGIGSI+LYEPP LQLSIAMLMKRD N IG+IEVFDPILSVTESRVLE LGCSVMSINEHGKREA+KPTMFFMPHCEAELYNNLL+ANWKP+ L NMVLFGNSFE YE +VSLCKNSP+ NS+ +ILA RSF NE +IE I +DYYNAFHDSSWHFFS VHE+ELQFINS
Sbjct: 1 MAASAKTLTNTNCTTSGDWTVVLPRRGKQRRKVAEVGKILEEKQEPWAPTDSQTDPGKETALMQKMERYINRIGNSQFYHTFRDQIQTSVFDYFRTVLGSDTKMQMVIYGIGSIDLYEPPRLQLSIAMLMKRDFNWIGSIEVFDPILSVTESRVLETLGCSVMSINEHGKREALKPTMFFMPHCEAELYNNLLRANWKPNLLKNMVLFGNSFETYEQHVSLCKNSPIQNSLGYILAVRSFANEFRIETISDDYYNAFHDSSWHFFSAVHETELQFINS 278
BLAST of XM_058928884.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2K3PNL0|A0A2K3PNL0_TRIPR (Protein sensitivity to red light reduced 1-like OS=Trifolium pratense OX=57577 GN=L195_g013589 PE=3 SV=1) HSP 1 Score: 458.759 bits (1179), Expect = 1.882e-161 Identity = 220/278 (79.14%), Postives = 239/278 (85.97%), Query Frame = 0 Query: 1 MAASAKSLT-----TDGDWTVILPRRGRQRRKDTEVEKISEEKQEPWAPTDSQKDPIRETALMQKMERYITKIENSQFYQTFRDQIETSVLDYFHIVLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLIGNIEVFDPILSVTESRVLEALGCSVMSINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYVSLCKNSPVLNSVKHILAARSFTNEIKIEKIPEDYYNAFHDSSWHFFSPVHESELQFINS 273
MAASAK+LT TD DWTV+LPRRGRQ+RK TEV +I EEKQEPW PTDSQ DP RE LMQKME YI+KI NSQFY TF DQI+TS LD FH VLGSET MQMVIYGIGSIELYEPPCLQLSIAMLMKRD N IGNIEVFDPILS TESRVLEALGC+VMSINEHGKREA+KPTMFFMPHCEAELY NLL+ANWK + L NMVLFGNSFE YE +++LCK + + NS+ HILAARSFT+E KIE I +DYY AFHDSSWHFFSPVHE+ELQFINS
Sbjct: 1 MAASAKTLTNSNCTTDEDWTVVLPRRGRQKRKITEVGRILEEKQEPWTPTDSQTDPSREAPLMQKMEDYISKIGNSQFYHTFSDQIQTSALDSFHKVLGSETKMQMVIYGIGSIELYEPPCLQLSIAMLMKRDFNWIGNIEVFDPILSATESRVLEALGCTVMSINEHGKREALKPTMFFMPHCEAELYINLLRANWKLNLLKNMVLFGNSFEAYEEHLALCKYTSIPNSIGHILAARSFTSEFKIETISDDYYKAFHDSSWHFFSPVHETELQFINS 278
BLAST of XM_058928884.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2Z6NRC7|A0A2Z6NRC7_TRISU (SRR1-like domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_118950 PE=3 SV=1) HSP 1 Score: 458.759 bits (1179), Expect = 2.268e-161 Identity = 216/278 (77.70%), Postives = 239/278 (85.97%), Query Frame = 0 Query: 1 MAASAKSLT-----TDGDWTVILPRRGRQRRKDTEVEKISEEKQEPWAPTDSQKDPIRETALMQKMERYITKIENSQFYQTFRDQIETSVLDYFHIVLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLIGNIEVFDPILSVTESRVLEALGCSVMSINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYVSLCKNSPVLNSVKHILAARSFTNEIKIEKIPEDYYNAFHDSSWHFFSPVHESELQFINS 273
MAASAK+ T TD DWTV+LPRRGRQ+RK TE+ + EEKQEPW PTDSQ DP RE LMQKME YI+KI NS FY TF DQI+TSVLDYFH VLGSET MQMVIYGIGSI+LYEPPCLQLSIAMLMKRD N IGNIEVFDP+LS TESRVLEALGC+VMSINEHGKREA+KPTMFFMPHCEAELY NLL+ANWKP+ L NMVLFGNSFE YE +++LCK + + NS+ HILAARSFT+E KIE I +DYY AFHDSSWHFF+PVHE+ELQFINS
Sbjct: 1 MAASAKTFTNSNCTTDEDWTVVLPRRGRQKRKITEIGSVLEEKQEPWTPTDSQTDPSREKTLMQKMEDYISKIGNSLFYHTFSDQIQTSVLDYFHKVLGSETKMQMVIYGIGSIQLYEPPCLQLSIAMLMKRDFNWIGNIEVFDPVLSATESRVLEALGCTVMSINEHGKREALKPTMFFMPHCEAELYINLLRANWKPNLLKNMVLFGNSFEAYEEHLALCKYTSIPNSIGHILAARSFTSEFKIETISDDYYKAFHDSSWHFFAPVHETELQFINS 278
BLAST of XM_058928884.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A392N6X9|A0A392N6X9_9FABA (Protein SENSITIVITY TO RED LIGHT REDUCED 1-like OS=Trifolium medium OX=97028 GN=A2U01_0015875 PE=3 SV=1) HSP 1 Score: 457.603 bits (1176), Expect = 5.757e-161 Identity = 220/278 (79.14%), Postives = 240/278 (86.33%), Query Frame = 0 Query: 1 MAASAKSLT-----TDGDWTVILPRRGRQRRKDTEVEKISEEKQEPWAPTDSQKDPIRETALMQKMERYITKIENSQFYQTFRDQIETSVLDYFHIVLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLIGNIEVFDPILSVTESRVLEALGCSVMSINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYVSLCKNSPVLNSVKHILAARSFTNEIKIEKIPEDYYNAFHDSSWHFFSPVHESELQFINS 273
MAASAK+LT TD DWTV+LPR GRQ+RK TEV +I EEKQEPW PTDSQ DP RETALMQKME YI+KI NSQFY TF DQI+TS LD FH VLGSET MQMVIYGIGSIELYEPP LQLSIAMLMKRD N IGNIEVFDPILS TESRVLEALGC+VMSINEHGKREA+KPTMFFMPHCEAELY NLL+ANWKP+ L NMVLFGNSFE YE +++LCK + + NS+ HILAARSFT+E KIE I +DYY AFHDSSWHFF+PVHE+ELQFINS
Sbjct: 1 MAASAKTLTNSNCTTDEDWTVVLPRCGRQKRKITEVGRILEEKQEPWTPTDSQTDPSRETALMQKMEDYISKIGNSQFYHTFSDQIQTSALDSFHKVLGSETKMQMVIYGIGSIELYEPPRLQLSIAMLMKRDFNWIGNIEVFDPILSATESRVLEALGCTVMSINEHGKREALKPTMFFMPHCEAELYINLLRANWKPNLLKNMVLFGNSFEAYEEHLALCKYTSIPNSIGHILAARSFTSEFKIETISDDYYKAFHDSSWHFFTPVHETELQFINS 278
BLAST of XM_058928884.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8LJ14|A0A8B8LJ14_ABRPR (Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Abrus precatorius OX=3816 GN=LOC113865570 PE=3 SV=1) HSP 1 Score: 452.595 bits (1163), Expect = 5.483e-159 Identity = 212/278 (76.26%), Postives = 239/278 (85.97%), Query Frame = 0 Query: 1 MAASAKSLTTD-----GDWTVILPRRGRQRRKDTEVEKISEEKQEPWAPTDSQKDPIRETALMQKMERYITKIENSQFYQTFRDQIETSVLDYFHIVLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLIGNIEVFDPILSVTESRVLEALGCSVMSINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYVSLCKNSPVLNSVKHILAARSFTNEIKIEKIPEDYYNAFHDSSWHFFSPVHESELQFINS 273
MAAS KSLT D GDWTV+LPRRGRQRRK T+V I EEKQE W PTDSQ DPIRET LMQKME+ I KI +S+FY TFRDQIETSVLDYFH VLGSE M M+IYGIGSIELYEPPCLQLS+A+LMKRD + IGNIEVFDPILSV+ESRVLEALGC V+SINEHG+REA+KPTMFFMPHCEAELYNNLL ANWKP L+N V+FGNSFE YE ++S+CKNSP++NS +HILA R FT+E +I+ + +DYYNAFHDSSWHFF PVHE+ELQFINS
Sbjct: 1 MAASTKSLTVDSCTSNGDWTVVLPRRGRQRRKATKV-GILEEKQEAWTPTDSQTDPIRETKLMQKMEKCIAKIGSSKFYHTFRDQIETSVLDYFHRVLGSEIKMPMIIYGIGSIELYEPPCLQLSLAILMKRDFSWIGNIEVFDPILSVSESRVLEALGCCVISINEHGRREAIKPTMFFMPHCEAELYNNLLHANWKPELLSNTVIFGNSFETYEQHLSICKNSPIINSTEHILAVRRFTSEFRIKTVSDDYYNAFHDSSWHFFGPVHEAELQFINS 277
BLAST of XM_058928884.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6A4QTK8|A0A6A4QTK8_LUPAL (Putative sensitivity To Red Light Reduced-like, SRR1 OS=Lupinus albus OX=3870 GN=Lalb_Chr03g0032801 PE=3 SV=1) HSP 1 Score: 435.261 bits (1118), Expect = 4.464e-152 Identity = 213/278 (76.62%), Postives = 236/278 (84.89%), Query Frame = 0 Query: 1 MAASAKSLTTDG-----DWTVILPRRGRQRRKDTEVEKISEEKQEPWAPTDSQKDPIRETALMQKMERYITKIENSQFYQTFRDQIETSVLDYFHIVLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLIGNIEVFDPILSVTESRVLEALGCSVMSINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYVSLCKNSPVLNSVKHILAARSFTNEIKIEKIPEDYYNAFHDSSWHFFSPVHESELQFINS 273
MAASAK+LT + +WTV+LPRRGR+ RK T+VE I EEKQEPWAPTDSQ DP RET + KMER I KI SQFY TFRDQIETSV D+ H VLGSET MQMV+YGIGSIELYEPPCLQLS+A+LMKRD + I NIEVFDPILSVTE+RVLEA GCSV+SINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKP L+NMVL GNSFEEYE + SLCKNSPVLNS++HILA R FT+EIKI+KI +DYYNAFHDSSWHFFSP H+ +L I S
Sbjct: 1 MAASAKTLTINNCTSKEEWTVVLPRRGRKGRKATKVE-ILEEKQEPWAPTDSQIDPSRETKVKGKMERCIDKIRASQFYHTFRDQIETSVFDHIHRVLGSETKMQMVMYGIGSIELYEPPCLQLSLAILMKRDFSWIENIEVFDPILSVTETRVLEAFGCSVISINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKPKPLSNMVLLGNSFEEYEEHASLCKNSPVLNSMEHILAIRRFTHEIKIQKISDDYYNAFHDSSWHFFSPDHDIDLPCIKS 277
BLAST of XM_058928884.1 vs. ExPASy TrEMBL (2024)
Match: tr|K7KTW1|K7KTW1_SOYBN (SRR1-like domain-containing protein OS=Glycine max OX=3847 GN=100812408 PE=3 SV=1) HSP 1 Score: 432.18 bits (1110), Expect = 6.666e-151 Identity = 206/277 (74.37%), Postives = 236/277 (85.20%), Query Frame = 0 Query: 1 MAASAKSLT----TDGDWTVILPRRGRQRRKDTEVEKISEEKQEPWAPTDSQKDPIRETALMQKMERYITKIENSQFYQTFRDQIETSVLDYFHIVLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLIGNIEVFDPILSVTESRVLEALGCSVMSINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYVSLCKNSPVLNSVKHILAARSFTNEIKIEKIPEDYYNAFHDSSWHFFSPVHESELQFINS 273
MAAS K+LT T+ WTV+LPRR RQRRK T+ + EEKQEPW PTDSQ DP +E L+QKMER I +IE S+FY TFRDQI+TSV+DYF+ VLGSE MQMVIYGIGSI+LYEPP LQLS+A+LM+RDL+ IGNIEVFDPILS TESRVLEALGCSVMSINEHG+REA+KPTMFFMPHCEAELYNNLLQANWK + L NMVLFGNSFE YE +VSLCKNSP+LNS+ HILAA+ FTNE +I+ + +DYYNAFHDSSWHFFSP+ E+EL INS
Sbjct: 1 MAASEKTLTNKCTTNEGWTVVLPRRSRQRRKATK-SGVLEEKQEPWTPTDSQTDPSKEATLVQKMERCINRIEGSEFYHTFRDQIQTSVVDYFNRVLGSEIKMQMVIYGIGSIKLYEPPRLQLSLAILMRRDLSWIGNIEVFDPILSATESRVLEALGCSVMSINEHGRREALKPTMFFMPHCEAELYNNLLQANWKLNLLKNMVLFGNSFETYEQHVSLCKNSPILNSMGHILAAQGFTNEFRIQTVSDDYYNAFHDSSWHFFSPLLETELPIINS 276
BLAST of XM_058928884.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2QAA2|A0A0B2QAA2_GLYSO (Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Glycine soja OX=3848 GN=D0Y65_014101 PE=3 SV=1) HSP 1 Score: 432.18 bits (1110), Expect = 6.666e-151 Identity = 206/277 (74.37%), Postives = 236/277 (85.20%), Query Frame = 0 Query: 1 MAASAKSLT----TDGDWTVILPRRGRQRRKDTEVEKISEEKQEPWAPTDSQKDPIRETALMQKMERYITKIENSQFYQTFRDQIETSVLDYFHIVLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLIGNIEVFDPILSVTESRVLEALGCSVMSINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYVSLCKNSPVLNSVKHILAARSFTNEIKIEKIPEDYYNAFHDSSWHFFSPVHESELQFINS 273
MAAS K+LT T+ WTV+LPRR RQRRK T+ + EEKQEPW PTDSQ DP +E L+QKMER I +IE S+FY TFRDQI+TSV+DYF+ VLGSE MQMVIYGIGSI+LYEPP LQLS+A+LM+RDL+ IGNIEVFDPILS TESRVLEALGCSVMSINEHG+REA+KPTMFFMPHCEAELYNNLLQANWK + L NMVLFGNSFE YE +VSLCKNSP+LNS+ HILAA+ FTNE +I+ + +DYYNAFHDSSWHFFSP+ E+EL INS
Sbjct: 1 MAASEKTLTNKCTTNEGWTVVLPRRSRQRRKATK-SGVLEEKQEPWTPTDSQTDPSKEATLVQKMERCINRIEGSEFYHTFRDQIQTSVVDYFNRVLGSEIKMQMVIYGIGSIKLYEPPRLQLSLAILMRRDLSWIGNIEVFDPILSATESRVLEALGCSVMSINEHGRREALKPTMFFMPHCEAELYNNLLQANWKLNLLKNMVLFGNSFETYEQHVSLCKNSPILNSMGHILAAQGFTNEFRIQTVSDDYYNAFHDSSWHFFSPLLETELPIINS 276
BLAST of XM_058928884.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8GWZ6|SRR1_ARATH (Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Arabidopsis thaliana OX=3702 GN=SRR1 PE=2 SV=2) HSP 1 Score: 294.664 bits (753), Expect = 3.087e-99 Identity = 145/271 (53.51%), Postives = 197/271 (72.69%), Query Frame = 0 Query: 1 MAASAKSLTTDGDWTVILPRRGRQ-RRKDTEVEKISEEKQEPWAPTDSQKDPIRETALMQKMERYITKIENSQFYQTFRDQIET-SVLDYFHIVLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLIG-NIEVFDPILSVTESRVLEALGCSVMSINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYVSLCKNSPVLNSVKHILAARSFTNEIKIEKIPEDYYNAFHDSSWHFFSPVHESEL 268
M + K+ ++DG+W V+LP +GRQ RR+ + + +EE+++PW D + DP R+ L QKME + KIE+S FY F +Q+++ V + +VLGSET +QMV+YGIGSIE YE P QLSIA+LMKR+ + +G NIEVFDP+LS TES LE+LGCSV+S+NE +REA+KPT+FFMPHCEA LY+NLLQANW+ L+ + LFGNSF+ YE VS ++ V+ + K I+AA+ T+E IE +DY+ AFHDSSWHFFS +SEL
Sbjct: 1 METTVKNSSSDGEWKVVLPSKGRQGRRRKPKPKGQAEEEEQPWKSDDLEIDPQRQARLKQKMEISLKKIESSSFYTAFLEQLKSPEVSNQIRLVLGSETQLQMVMYGIGSIESYESPRFQLSIAILMKREFDWVGDNIEVFDPVLSATESSYLESLGCSVLSVNEQARREALKPTLFFMPHCEANLYSNLLQANWRMDRLSKIALFGNSFQMYEEQVSF--DAEVICATKRIIAAQRVTSEFAIETESDDYFAAFHDSSWHFFSSGIDSEL 269
BLAST of XM_058928884.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8K2M3|SRR1L_MOUSE (SRR1-like protein OS=Mus musculus OX=10090 GN=Srrd PE=2 SV=4) HSP 1 Score: 87.4261 bits (215), Expect = 3.027e-19 Identity = 52/146 (35.62%), Postives = 79/146 (54.11%), Query Frame = 0 Query: 95 SETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLI-GNIEVFDPILSVTESRVLEALGCSVMSINEHGKREA-VKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYVS---LCKNSPVLNSVKHILAARSF 235
S + ++ V YG+G+ +QL+ +L + + V+DP+ S TE VL +LG +V+S NE GKR +PT+F+MPHC LYNNLL +NW L+ +++ GNSF E + L +N P + V +A F
Sbjct: 104 SASHVKCVCYGLGTFASCPTARIQLAFMLLFLEKCQVPRSHCWVYDPLFSQTEVSVLTSLGVTVLSENEEGKRSVQGQPTVFYMPHCGTALYNNLLWSNWSADALSRVLIIGNSFRGLEERLLARILQENYPYIAKVSDRIAGPGF 249
BLAST of XM_058928884.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9UH36|SRR1L_HUMAN (SRR1-like protein OS=Homo sapiens OX=9606 GN=SRRD PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 7.662e-18 Identity = 62/182 (34.07%), Postives = 91/182 (50.00%), Query Frame = 0 Query: 91 IVLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLI-GNIEVFDPILSVTESRVLEALGCSVMSINEHGKREA-VKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYV---SLCKNSPVLNSVKHILAARSFTNEIKIEKIPEDYYNAFHDSSWHFFSPVHESE 267
I++ ++ V YGIG+ QL+ +L+ + + V+DP+ S E VL LG +V+S NE GKR +PT+F+M HC LYNNLL +NW L+ MV+ GNSF+ E + L KN P + + L F Y + F+D+S H+F PV + E
Sbjct: 131 ILVTGTCHLKCVCYGIGNFATCIVARNQLTFLLLLLEKCQIPRSHCWVYDPLFSQLEIEVLNTLGVTVLSENEEGKRSIRGEPTIFYMLHCGTALYNNLLWSNWSVDALSKMVIIGNSFKGLEERLLARILQKNYPYIAKILKGLEELEFPQ-------TSQYMDIFNDTSVHWF-PVQKLE 304
BLAST of XM_058928884.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9VEB5|SRR1L_DROME (SRR1-like protein OS=Drosophila melanogaster OX=7227 GN=CG7988 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 1.344e-11 Identity = 41/123 (33.33%), Postives = 61/123 (49.59%), Query Frame = 0 Query: 138 FDPILSVTESRVLEALGCSVMSINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYVSLCKNSPVLNSVKHILAARSFTNEIKIEKIPEDYYNAFHDSSWHFF 260
FDP+ +E ++ +MS + GK EA PT++++PHC L +N+L +NWK L N+ L NSFE + +P N HI E +E E ++N F+D S H F
Sbjct: 120 FDPVFRDSEKELIRLFDGCIMSKDCAGKHEATVPTLYYLPHCPYALMHNILWSNWKRETLPNVFLISNSFE-------MLTMTP-RNQDDHITRIVEHCTETPLEDDYE-HHNVFNDLSLHTF 233
BLAST of XM_058928884.1 vs. Araport11
Match: | (Symbols: SRR1 | SENSITIVITY TO RED LIGHT REDUCED 1 | chr5:24000747-24001574 REVERSE LENGTH=275) HSP 1 Score: 294.664 bits (753), Expect = 3.226e-100 Identity = 145/271 (53.51%), Postives = 197/271 (72.69%), Query Frame = 0 Query: 1 MAASAKSLTTDGDWTVILPRRGRQ-RRKDTEVEKISEEKQEPWAPTDSQKDPIRETALMQKMERYITKIENSQFYQTFRDQIET-SVLDYFHIVLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLIG-NIEVFDPILSVTESRVLEALGCSVMSINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYVSLCKNSPVLNSVKHILAARSFTNEIKIEKIPEDYYNAFHDSSWHFFSPVHESEL 268
M + K+ ++DG+W V+LP +GRQ RR+ + + +EE+++PW D + DP R+ L QKME + KIE+S FY F +Q+++ V + +VLGSET +QMV+YGIGSIE YE P QLSIA+LMKR+ + +G NIEVFDP+LS TES LE+LGCSV+S+NE +REA+KPT+FFMPHCEA LY+NLLQANW+ L+ + LFGNSF+ YE VS ++ V+ + K I+AA+ T+E IE +DY+ AFHDSSWHFFS +SEL
Sbjct: 1 METTVKNSSSDGEWKVVLPSKGRQGRRRKPKPKGQAEEEEQPWKSDDLEIDPQRQARLKQKMEISLKKIESSSFYTAFLEQLKSPEVSNQIRLVLGSETQLQMVMYGIGSIESYESPRFQLSIAILMKREFDWVGDNIEVFDPVLSATESSYLESLGCSVLSVNEQARREALKPTLFFMPHCEANLYSNLLQANWRMDRLSKIALFGNSFQMYEEQVSF--DAEVICATKRIIAAQRVTSEFAIETESDDYFAAFHDSSWHFFSSGIDSEL 269
BLAST of XM_058928884.1 vs. Araport11
Match: | (Symbols: SRR1 | SENSITIVITY TO RED LIGHT REDUCED 1 | chr5:24000747-24001574 REVERSE LENGTH=275) HSP 1 Score: 294.664 bits (753), Expect = 3.226e-100 Identity = 145/271 (53.51%), Postives = 197/271 (72.69%), Query Frame = 0 Query: 1 MAASAKSLTTDGDWTVILPRRGRQ-RRKDTEVEKISEEKQEPWAPTDSQKDPIRETALMQKMERYITKIENSQFYQTFRDQIET-SVLDYFHIVLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLIG-NIEVFDPILSVTESRVLEALGCSVMSINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYVSLCKNSPVLNSVKHILAARSFTNEIKIEKIPEDYYNAFHDSSWHFFSPVHESEL 268
M + K+ ++DG+W V+LP +GRQ RR+ + + +EE+++PW D + DP R+ L QKME + KIE+S FY F +Q+++ V + +VLGSET +QMV+YGIGSIE YE P QLSIA+LMKR+ + +G NIEVFDP+LS TES LE+LGCSV+S+NE +REA+KPT+FFMPHCEA LY+NLLQANW+ L+ + LFGNSF+ YE VS ++ V+ + K I+AA+ T+E IE +DY+ AFHDSSWHFFS +SEL
Sbjct: 1 METTVKNSSSDGEWKVVLPSKGRQGRRRKPKPKGQAEEEEQPWKSDDLEIDPQRQARLKQKMEISLKKIESSSFYTAFLEQLKSPEVSNQIRLVLGSETQLQMVMYGIGSIESYESPRFQLSIAILMKREFDWVGDNIEVFDPVLSATESSYLESLGCSVLSVNEQARREALKPTLFFMPHCEANLYSNLLQANWRMDRLSKIALFGNSFQMYEEQVSF--DAEVICATKRIIAAQRVTSEFAIETESDDYFAAFHDSSWHFFSSGIDSEL 269 The following BLAST results are available for this feature:
BLAST of XM_058928884.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-12 (Blastp of Vicia villosa cv. AU Merit v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of XM_058928884.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-12 (Blastp of Vicia villosa cv. AU Merit v1.0 proteins vs UniProt Swissprot) Total hits: 4 Position : 0 Zoom : x 1
BLAST of XM_058928884.1 vs. Araport11
Analysis Date: 2024-08-12 (Blastp of Vicia villosa cv. AU Merit v1.0 proteins vs arabidopsis Araport11) Total hits: 2 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Vicia villosa cv. AU Merit genome v1.0
Date Performed: 2024-08-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >drVicVill.AUMerit.1.0.rna-XM_058928884.1 ID=drVicVill.AUMerit.1.0.rna-XM_058928884.1; Name=XM_058928884.1; organism=Vicia villosa; type=mRNA; length=822bpback to top protein sequence of drVicVill.AUMerit.1.0.rna-XM_058928884.1 >drVicVill.AUMerit.1.0.rna-XM_058928884.1 ID=drVicVill.AUMerit.1.0.rna-XM_058928884.1; Name=drVicVill.AUMerit.1.0.rna-XM_058928884.1; organism=Vicia villosa; type=polypeptide; length=273bpback to top mRNA from alignment at LG3:201908935..201909619- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>drVicVill.AUMerit.1.0.rna-XM_058928884.1 ID=drVicVill.AUMerit.1.0.rna-XM_058928884.1; Name=XM_058928884.1; organism=Vicia villosa; type=mRNA; length=685bp; location=Sequence derived from: LG3:201908935..201909619- (Vicia villosaback to top Coding sequence (CDS) from alignment at LG3:201908935..201909619- >drVicVill.AUMerit.1.0.rna-XM_058928884.1 ID=drVicVill.AUMerit.1.0.rna-XM_058928884.1; Name=XM_058928884.1; organism=Vicia villosa; type=CDS; length=594bp; location=Sequence derived from: LG3:201908935..201909619- (Vicia villosaback to top |