XM_058930720.1

Transcript Overview
NameXM_058930720.1
Unique NamedrVicVill.AUMerit.1.0.rna-XM_058930720.1
TypemRNA
OrganismVicia villosa (vetch)
Sequence length570
References
External references for this mRNA
DatabaseAccession
GeneID131661256
GenBankXM_058930720.1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
LG3chromosomeLG3:45886613..45892509 -Vicia villosa cv. AU Merit genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
anvvaL0166Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjvvaL177Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvvaL166Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
anvvaL0389Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carvvaL382Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
psvvaL473Pisum sativum Cameor genome v1aPisum sativum
avjvvaL566Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvvaL0763Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carvvaL607Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
anvvaL1245Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
pvvvaL110Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vasvvaL279Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvvaL870Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvvaL906Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vasvvaL820Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vrvvvaL070Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvvaL255Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvvaL518Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvvaL583Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vvavvaR206Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vssvvaL210Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvvaL080Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vstvvaL284Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vumvvaL222Vigna umbellata FF25 genome v1.0Vigna umbellata
vssvvaL319Vicia sativa cv. Studenica genome v1.0Vicia sativa
vumvvaL421Vigna umbellata FF25 genome v1.0Vigna umbellata
vstvvaL827Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vssvvaL748Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvvaL771Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vigst.02G121500.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Phvul.009G050300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vfaba.Hedin2.R1.4g052080.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Va11G007570.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
jg15831.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
evm.Ca_v2.0_22317Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
rna-TanjilR_11174Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vum_09G01140.1Vigna umbellata FF25 genome v1.0Vigna umbellata
jg54281.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigst.09G101600.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
evm.Ca_v2.0_14370Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Va04G048080.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-TanjilR_20929Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun09g143100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vum_02G01320.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigan.02G165000.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vfaba.Hedin2.R1.2g134360.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigun10g150500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigan.09G178500.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
XM_058887854.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
LOC131661256drVicVill.AUMerit.1.0.gene-LOC131661256Vicia villosagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_058930720.1-2drVicVill.AUMerit.1.0.exon-XM_058930720.1-2Vicia villosaexon
exon-XM_058930720.1-1drVicVill.AUMerit.1.0.exon-XM_058930720.1-1Vicia villosaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
XP_058786703.1drVicVill.AUMerit.1.0.cds-XP_058786703.1_2Vicia villosaCDS
XP_058786703.1drVicVill.AUMerit.1.0.cds-XP_058786703.1Vicia villosaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drVicVill.AUMerit.1.0.rna-XM_058930720.1drVicVill.AUMerit.1.0.rna-XM_058930720.1Vicia villosapolypeptide
drVicVill.AUMerit.1.0.rna-XM_058930720.1drVicVill.AUMerit.1.0.rna-XM_058930720.1-proteinVicia villosapolypeptide


Homology
[Close]
BLAST of XM_058930720.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D4WRP7|A0A9D4WRP7_PEA (SS18 N-terminal domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_052286 PE=3 SV=1)

HSP 1 Score: 320.857 bits (821), Expect = 1.152e-109
Identity = 166/190 (87.37%), Postives = 172/190 (90.53%), Query Frame = 0 
Query:    1 MMNGDPSLSMLSTEQIQKYLEENKELILAIMEGKSQGKYAEIAPYQTKLQDNLTFLARLADFDSQPEPQAQMHSQGQGMQRLPQVAMSQQRPDFSIGNTAFDMNE-QQQQQQHLAMPSQQPDLSTSKLAFQMNEQQHYKQPTFIQQRQLFPEGMNSFSGTNNSSMQTRTFNLPDTPSFNQMGSDAGPGWS 189
            MMNGD  L+MLSTEQIQK LEENKELILAIME KSQGKYAEIAPYQTKLQDNLTFLARLADFDSQPEPQAQMHSQ QGMQR  QVAM QQRPDFS  N+ FDMNE QQQ+QQHLA+ SQQPDLS SKLAFQ+NEQQHYKQPTF+QQRQLFPEGMN FSGTNNS MQTR  NLPDTPSFNQMGSDAGPGWS
Sbjct:    1 MMNGDLPLTMLSTEQIQKCLEENKELILAIMEAKSQGKYAEIAPYQTKLQDNLTFLARLADFDSQPEPQAQMHSQAQGMQRQSQVAMPQQRPDFSTVNSGFDMNEQQQQKQQHLAVSSQQPDLSASKLAFQLNEQQHYKQPTFLQQRQLFPEGMNGFSGTNNSGMQTRNCNLPDTPSFNQMGSDAGPGWS 190
[Close]
BLAST of XM_058930720.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2YDD0|A0A1S2YDD0_CICAR (GRF1-interacting factor 3-like OS=Cicer arietinum OX=3827 GN=LOC101505138 PE=3 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 1.829e-82
Identity = 141/200 (70.50%), Postives = 155/200 (77.50%), Query Frame = 0 
Query:    1 MMNGDPSLSMLSTEQIQKYLEENKELILAIMEGKSQGKYAEIAPYQTKLQDNLTFLARLADFDSQPEPQAQMHSQGQGMQ--------RLPQVAMS-QQRPDFSIGNTAFDMNEQQQQQQHLAMP-SQQPDLSTSKLAFQMNEQQHYKQPTFIQQRQLFPEGMNSFSG-TNNSSMQTRTFNLPDTPSFNQMGSDAGPGWS 189
            MMN DPSL +L+TEQIQK LEENKELI+AI+EG+++GKYAEI PYQ KLQ NLTFLA+LAD   Q  PQAQ HS GQGMQ        + P VAMS QQRPD S  N+AF+ NE QQQQQHLAM   QQPD STSK+AFQMNE QH+K P F QQRQLFPEGM SF+G TNNS MQTR  NL DTPSFNQMGSD  PGWS
Sbjct:    1 MMNVDPSLPVLTTEQIQKCLEENKELIMAILEGQNKGKYAEIIPYQAKLQHNLTFLAKLADVGPQAGPQAQTHSPGQGMQQQPPLIMSQQPHVAMSQQQRPDLSTLNSAFNTNE-QQQQQHLAMSLQQQPDFSTSKMAFQMNE-QHHKLPAFFQQRQLFPEGMGSFTGTTNNSGMQTRLCNLQDTPSFNQMGSDISPGWS 198
[Close]
BLAST of XM_058930720.1 vs. ExPASy TrEMBL (2024)
Match: tr|G7J885|G7J885_MEDTR (Putative transcription factor SSXT family OS=Medicago truncatula OX=3880 GN=11425200 PE=3 SV=2)

HSP 1 Score: 227.254 bits (578), Expect = 1.253e-72
Identity = 134/191 (70.16%), Postives = 150/191 (78.53%), Query Frame = 0 
Query:    1 MMNGDPSLSMLSTEQIQKYLEENKELILAIMEGKSQGKYAEIAPYQTKLQDNLTFLARLADFDSQPEPQAQMHSQGQGMQRLPQVAMSQQRPDFSIGNTAFDMNEQQQQQQ-HLAMPSQQPDLSTSKLAFQMNEQQHYKQPTFIQQRQLFPEGMNSFSGTNNSSMQTRTFNLPDTPSFN-QMGSDAGPGWS 189
            MMN DPSL +L+TEQIQK LEEN+ELI+ I+EG+ QGK++E+ PYQ KLQ NLTFLA+LADF  Q  PQAQ HSQGQGMQ+  QV M  QRPDF++ N+AFDMNEQQQ QQ HL M  QQPDLS SK AFQMNEQQH KQPTF  Q QLFPEGMNSF+GTNN  MQT   NLPD  SF  Q+GSD  PGWS
Sbjct:    1 MMNADPSLPVLTTEQIQKCLEENEELIMKILEGQKQGKHSELGPYQAKLQHNLTFLAKLADFGPQARPQAQTHSQGQGMQQQHQVPMPLQRPDFAV-NSAFDMNEQQQLQQQHLTMSLQQPDLSASKFAFQMNEQQHNKQPTFF-QHQLFPEGMNSFTGTNNRGMQTGNNNLPDMQSFEYQIGSDVSPGWS 189
[Close]
BLAST of XM_058930720.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2Z6NYK1|A0A2Z6NYK1_TRISU (SS18 N-terminal domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_319970 PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.367e-59
Identity = 118/161 (73.29%), Postives = 126/161 (78.26%), Query Frame = 0 
Query:    1 MMNGDPSLSMLSTEQIQKYLEENKELILAIMEGKSQGKYAEIAPYQTKLQDNLTFLARLADFDSQPEPQAQMHSQGQGM-----------QRLPQVAMSQQRPDFSIGNTAFDMNEQQQQQQHLAMPSQQPDLSTSKLAFQMNEQQHYKQPTFIQQRQLFP 150
            MMN DPSL ML+TEQIQK LEENKELILAI+EG++QGKY EIAPYQ KLQ NLTFLA+LAD   Q  PQAQ HSQGQGM           Q+ PQVAMSQQR DFS  + +FDMNEQQQQQQH AM  QQPDLSTSKL FQMNE QH KQPTF QQRQLFP
Sbjct:    1 MMNADPSLPMLTTEQIQKCLEENKELILAILEGQNQGKYGEIAPYQAKLQQNLTFLAKLADVGPQTGPQAQTHSQGQGMQQQQQPQVAMSQQQPQVAMSQQRSDFSSVHPSFDMNEQQQQQQHFAMSLQQPDLSTSKLGFQMNE-QHSKQPTFFQQRQLFP 160
[Close]
BLAST of XM_058930720.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2K3MX10|A0A2K3MX10_TRIPR (Grf1-interacting factor 3-like protein OS=Trifolium pratense OX=57577 GN=L195_g012991 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 9.637e-58
Identity = 114/154 (74.03%), Postives = 120/154 (77.92%), Query Frame = 0 
Query:    1 MMNGDPSLSMLSTEQIQKYLEENKELILAIMEGKSQGKYAEIAPYQTKLQDNLTFLARLADFDSQPEPQAQMHS----QGQGMQRLPQVAMSQQRPDFSIGNTAFDMNEQQQQQQHLAMPSQQPDLSTSKLAFQMNEQQHYKQPTFIQQRQLFP 150
            MMN DPSL ML+TEQIQK LEENKELILAI+EG++QGKY EIAPYQ KLQ NLTFLA+LAD   Q  PQAQ HS      Q  Q+ PQVAMSQQRPDFS  N  FDMNEQQQQQQ  AM  QQPDLSTSKL FQMNE QH KQP F QQRQLFP
Sbjct:    1 MMNADPSLPMLTTEQIQKCLEENKELILAILEGQNQGKYGEIAPYQAKLQQNLTFLAKLADVGPQAGPQAQTHSQGQGMQQQQQQQPQVAMSQQRPDFSSVNPGFDMNEQQQQQQQFAMSLQQPDLSTSKLGFQMNE-QHSKQPNFFQQRQLFP 153
[Close]
BLAST of XM_058930720.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151RS37|A0A151RS37_CAJCA (SS18-like protein 2 OS=Cajanus cajan OX=3821 GN=KK1_033068 PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 3.546e-54
Identity = 114/201 (56.72%), Postives = 135/201 (67.16%), Query Frame = 0 
Query:    1 MMNGDPSL---SMLSTEQIQKYLEENKELILAIMEGKSQGKYAEIAPYQTKLQDNLTFLARLADFDSQPEPQAQMHS-----QGQGMQRLPQVAMSQQRPDFSIGNTAFDMNEQQQQQQHLAMPSQQPDLSTSKLAFQMNEQQHYKQPTFI-QQRQLFPEGMNSFSGTNNS---SMQTRTFNLPDTPSFNQMGSDAGPGWS 189
            M N D SL   S ++TEQIQKYLEENKELILAI+E ++ GK  EIA  Q KLQ NLTFLA+LAD  +Q +  +Q+ S     QGQ MQ+   VA+SQ +PD S  N  F+MN+   QQQHLAM   QPD+S SKL  QMNE QHYK P F+ QQ+QL P  M SF GT +    + QTR  NL DTPS NQ GSD+G GWS
Sbjct:    1 MFNADTSLPNASTITTEQIQKYLEENKELILAILEYQNLGKINEIAQCQAKLQHNLTFLAKLADVATQAQTPSQVSSQPTMQQGQSMQQ-HHVAISQPQPDVSTLNPPFEMND---QQQHLAMSLHQPDISASKLPLQMNE-QHYKLPHFLYQQQQLIPGPMGSFPGTTSGLYQASQTRLGNLSDTPSSNQTGSDSGHGWS 196
[Close]
BLAST of XM_058930720.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7AW89|V7AW89_PHAVU (SS18 N-terminal domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_009G050300g PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.290e-52
Identity = 118/202 (58.42%), Postives = 138/202 (68.32%), Query Frame = 0 
Query:    1 MMNGDPSLS---MLSTEQIQKYLEENKELILAIMEGKSQGKYAEIAPYQTKLQDNLTFLARLADFDSQ-PEP-QAQMHS---QGQGMQRLPQVAMSQQRPDFSIGNTAFDM--NEQQQQQQHLAMPSQQPDLSTSKLAFQMNEQQHYKQPTFIQQRQLFPEGMNSFSGTNNS---SMQTRTFNLPDTPSFNQMGSDAGPGWS 189
            M N DPSLS    L+TEQIQKYLEENKELILAI+E ++ GK+AEI   Q KLQ NLT+LA+LAD  SQ P P Q   H+   QGQGM R PQVAMSQ +PD S  N   +M  ++QQ QQ HLAM   QPD+S SKL  QMNE Q+YK P F+ Q+Q  P  M +F G N+    + QTR  NLPDTPS NQ GSD+ PGWS
Sbjct:    1 MFNADPSLSNVSTLTTEQIQKYLEENKELILAILEYQNLGKFAEIVQCQAKLQHNLTYLAKLADAGSQAPTPSQVSSHAIVQQGQGM-RQPQVAMSQSQPDLSTFNVPIEMLSDQQQLQQHHLAMSIHQPDISASKLPLQMNE-QNYKLPFFLYQQQPIPGPMVNFPGANSGLYQASQTRLGNLPDTPSSNQTGSDSFPGWS 200
[Close]
BLAST of XM_058930720.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8K0F1|A0A8B8K0F1_ABRPR (GRF1-interacting factor 3-like OS=Abrus precatorius OX=3816 GN=LOC113850770 PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 2.844e-50
Identity = 109/198 (55.05%), Postives = 124/198 (62.63%), Query Frame = 0 
Query:    1 MMNGDPS---LSMLSTEQIQKYLEENKELILAIMEGKSQGKYAEIAPYQTKLQDNLTFLARLADFDSQPEPQAQMHSQGQGMQRLPQVAMSQQRPDFSIGNTAFDMNEQQQQQQHLAMPSQQPDLSTSKLAFQMNEQQHYKQPTFIQQRQLFPEGMNSFSGTNNSSM------QTRTFNLPDTPSFNQMGSDAGPGWS 189
            M NGDPS   +  L+TEQIQKYLEENKELILAIME +  GK+AEIA YQ KLQ NLTFLA+LAD             Q     + P + +SQ +PD SI N   D+N+   QQQHL     QPD+STSKL FQMNEQ H K P+F QQ QL P  M SF   NNS +      QTR  N  DTPS NQ+GSD GP WS
Sbjct:    1 MFNGDPSFPPVPTLTTEQIQKYLEENKELILAIMECQRLGKFAEIAQYQAKLQHNLTFLAKLAD-------AGPQAMQQGQGMQQPHIPVSQPQPDHSIMNLTLDIND---QQQHLGTSLHQPDISTSKLPFQMNEQNH-KVPSFFQQHQLIPGQMGSFPA-NNSGIYQIQGSQTRLGNSSDTPSNNQIGSDFGP-WS 185
[Close]
BLAST of XM_058930720.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6NNR6|A0A4D6NNR6_VIGUN (SS18 family OS=Vigna unguiculata OX=3917 GN=DEO72_LG11g2521 PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.079e-48
Identity = 114/199 (57.29%), Postives = 135/199 (67.84%), Query Frame = 0 
Query:    1 MMNGDPSL---SMLSTEQIQKYLEENKELILAIMEGKSQGKYAEIAPYQTKLQDNLTFLARLADFDSQ-PEPQAQMHSQGQGMQRLPQVAMSQQRPDFSIGNTAFDMNE--QQQQQQHLAMPSQQPDLSTSKLAFQMNEQQHYKQPTFIQQRQLFPEG-MNSFSGTNNS---SMQTRTFNLPDTPSFNQMGSDAGPGWS 189
            M N DPSL   S L+TEQIQKYLEENKELILAI+E ++ GK+AEIA  Q KLQ NLT+LA+LAD  SQ P P     SQGQGM++L Q AMSQ +PD S       MN+  QQ QQQH+ M   QPD+ +SKL  QMNE Q+YK P F+ Q+Q  P   M +F GTN +   + Q R  NLPDTPS NQ GSD+ PGWS
Sbjct:    1 MFNADPSLPNVSTLTTEQIQKYLEENKELILAILEYQNLGKFAEIAQCQAKLQHNLTYLAKLADAGSQSPTP-----SQGQGMRQL-QGAMSQPQPDLSTNFPFEIMNDQQQQLQQQHVTMSLHQPDIPSSKLPLQMNE-QNYKMPLFLYQQQPIPGAPMVNFPGTNAAIYQASQIRFGNLPDTPSSNQTGSDSVPGWS 192
[Close]
BLAST of XM_058930720.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A3Q0FJF4|A0A3Q0FJF4_VIGRR (GRF1-interacting factor 2-like isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106775640 PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.375e-47
Identity = 111/210 (52.86%), Postives = 136/210 (64.76%), Query Frame = 0 
Query:    1 MMNGDPSL---SMLSTEQIQKYLEENKELILAIMEGKSQGKYAEIAPYQTKLQDNLTFLARLADFDSQ-PEPQAQMHSQGQGMQRLPQVAMSQQRPDFSIGNTAFDM--------------NEQQQQQQHLAMPSQQPDLSTSKLAFQMNEQQHYKQPTFIQQRQLFPEGMNSFSGTNNS---SMQTRTFNLPDTPSFNQMGSDAGPGWS 189
            M N DPSL   S L+TEQIQKYLEENKELILAI+E ++ GK+AE+A  Q KLQ NLT+LA+LAD  SQ P P     SQGQGM++L QVAMSQ +PD S  N  F++               +QQ QQ H+ M  Q+PD+  SKL   MNE Q+YK P F+ Q+Q  P  M +F G+N+    + Q R  NLPDTPS NQ GSD+ PGWS
Sbjct:    1 MFNADPSLPNVSTLTTEQIQKYLEENKELILAILEYQNLGKFAELAQCQAKLQHNLTYLAKLADAGSQSPTP-----SQGQGMRQL-QVAMSQPQPDLS-KNLPFEIMSDQQQLQQQLQQQWQQQLQQPHVTMSLQEPDILASKLPLLMNE-QNYKIPHFLYQQQPIPGAMVNFPGSNSGIYQASQIRLGNLPDTPSSNQTGSDSVPGWS 202
[Close]
BLAST of XM_058930720.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q93VH6|GIF3_ARATH (GRF1-interacting factor 3 OS=Arabidopsis thaliana OX=3702 GN=GIF3 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.883e-14
Identity = 37/71 (52.11%), Postives = 51/71 (71.83%), Query Frame = 0 
Query:    6 PSLSMLSTEQIQKYLEENKELILAIMEGKSQGKYAEIAPYQTKLQDNLTFLARLADFDSQPEPQAQMHSQG 76
            P  + ++TEQIQKYL+ENK+LI+AI+E ++ GK AE A YQ  LQ NL +LA +A  D+QP+P A   + G
Sbjct:   16 PPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQKNLMYLAAIA--DAQPQPPAATLTSG 84
[Close]
BLAST of XM_058930720.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9MAL9|GIF2_ARATH (GRF1-interacting factor 2 OS=Arabidopsis thaliana OX=3702 GN=GIF2 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.718e-13
Identity = 33/56 (58.93%), Postives = 43/56 (76.79%), Query Frame = 0 
Query:    6 PSLSMLSTEQIQKYLEENKELILAIMEGKSQGKYAEIAPYQTKLQDNLTFLARLAD 61
            P  + ++TEQIQKYL+ENK+LI+AIME ++ GK AE A YQ  LQ NL +LA +AD
Sbjct:   17 PPANNITTEQIQKYLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIAD 72
[Close]
BLAST of XM_058930720.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q6AVI1|GIF1_ORYSJ (GRF-interacting factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GIF1 PE=1 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 8.592e-12
Identity = 36/72 (50.00%), Postives = 49/72 (68.06%), Query Frame = 0 
Query:    1 MMNGDPSLSMLSTEQIQKYLEENKELILAIMEGKSQGKYAEIAPYQTKLQDNLTFLARLADFDSQPEPQAQM 72
            MM G  S + ++T+ IQ+YL+ENK+LILAI++ ++ GK  E A  Q KLQ NL +LA +A  DSQP   A M
Sbjct:   13 MMGGYASPTTVTTDLIQQYLDENKQLILAILDNQNNGKVEECARNQAKLQHNLMYLAAIA--DSQPPQTAAM 82
[Close]
BLAST of XM_058930720.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|A5HEH4|GIF1_MAIZE (GRF-interacting factor 1 OS=Zea mays OX=4577 GN=GIF1 PE=1 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 4.606e-11
Identity = 33/66 (50.00%), Postives = 47/66 (71.21%), Query Frame = 0 
Query:    1 MMNGDPSLSMLSTEQIQKYLEENKELILAIMEGKSQGKYAEIAPYQTKLQDNLTFLARLADFDSQP 66
            MM G  S + ++T+ IQ+YL+ENK+LILAI++ ++ GK  E   +Q KLQ NL +LA +A  DSQP
Sbjct:   13 MMGGYTSPAAVTTDLIQQYLDENKQLILAILDNQNNGKAEECERHQAKLQHNLMYLAAIA--DSQP 76
[Close]
BLAST of XM_058930720.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8L8A5|GIF1_ARATH (GRF1-interacting factor 1 OS=Arabidopsis thaliana OX=3702 GN=GIF1 PE=1 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 2.058e-10
Identity = 33/67 (49.25%), Postives = 49/67 (73.13%), Query Frame = 0 
Query:    9 SMLSTEQIQKYLEENKELILAIMEGKSQGKYAEIAPYQTKLQDNLTFLARLADFDSQPEPQAQMHSQ 75
            S ++++ IQ+YL+ENK LIL I+E ++ GK +E A  Q +LQ NL +LA +A  DSQP+P + +HSQ
Sbjct:   18 SNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIA--DSQPQPPS-VHSQ 81
[Close]
BLAST of XM_058930720.1 vs. Araport11
Match: | (Symbols: GIF3 | GRF1-interacting factor 3 | chr4:357675-358928 FORWARD LENGTH=223)

HSP 1 Score: 71.633 bits (174), Expect = 2.958e-15
Identity = 37/71 (52.11%), Postives = 51/71 (71.83%), Query Frame = 0 
Query:    6 PSLSMLSTEQIQKYLEENKELILAIMEGKSQGKYAEIAPYQTKLQDNLTFLARLADFDSQPEPQAQMHSQG 76
            P  + ++TEQIQKYL+ENK+LI+AI+E ++ GK AE A YQ  LQ NL +LA +A  D+QP+P A   + G
Sbjct:   16 PPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQKNLMYLAAIA--DAQPQPPAATLTSG 84
[Close]
BLAST of XM_058930720.1 vs. Araport11
Match: | (Symbols: GIF3 | GRF1-interacting factor 3 | chr4:357675-358851 FORWARD LENGTH=222)

HSP 1 Score: 70.8626 bits (172), Expect = 4.726e-15
Identity = 37/71 (52.11%), Postives = 51/71 (71.83%), Query Frame = 0 
Query:    6 PSLSMLSTEQIQKYLEENKELILAIMEGKSQGKYAEIAPYQTKLQDNLTFLARLADFDSQPEPQAQMHSQG 76
            P  + ++TEQIQKYL+ENK+LI+AI+E ++ GK AE A YQ  LQ NL +LA +A  D+QP+P A   + G
Sbjct:   16 PPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQKNLMYLAAIA--DAQPQPPAATLTSG 84
[Close]
BLAST of XM_058930720.1 vs. Araport11
Match: | (Symbols: GIF2 | GRF1-interacting factor 2 | chr1:72583-73883 FORWARD LENGTH=195)

HSP 1 Score: 68.9366 bits (167), Expect = 1.767e-14
Identity = 33/56 (58.93%), Postives = 43/56 (76.79%), Query Frame = 0 
Query:    6 PSLSMLSTEQIQKYLEENKELILAIMEGKSQGKYAEIAPYQTKLQDNLTFLARLAD 61
            P  + ++TEQIQKYL+ENK+LI+AIME ++ GK AE A YQ  LQ NL +LA +AD
Sbjct:   17 PPANNITTEQIQKYLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIAD 72
[Close]
BLAST of XM_058930720.1 vs. Araport11
Match: | (Symbols: GIF, GIF1, ATGIF1, AN3 | GRF1-INTERACTING FACTOR, ANGUSTIFOLIA 3, GRF1-INTERACTING FACTOR 1, ARABIDOPSIS GRF1-INTERACTING FACTOR 1 | chr5:10647831-10649620 REVERSE LENGTH=210)

HSP 1 Score: 60.8474 bits (146), Expect = 2.107e-11
Identity = 33/67 (49.25%), Postives = 49/67 (73.13%), Query Frame = 0 
Query:    9 SMLSTEQIQKYLEENKELILAIMEGKSQGKYAEIAPYQTKLQDNLTFLARLADFDSQPEPQAQMHSQ 75
            S ++++ IQ+YL+ENK LIL I+E ++ GK +E A  Q +LQ NL +LA +A  DSQP+P + +HSQ
Sbjct:   18 SNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIA--DSQPQPPS-VHSQ 81
[Close]
BLAST of XM_058930720.1 vs. Araport11
Match: | (Symbols: GIF2 | GRF1-interacting factor 2 | chr1:72583-73883 FORWARD LENGTH=229)

HSP 1 Score: 55.8398 bits (133), Expect = 1.389e-9
Identity = 30/58 (51.72%), Postives = 38/58 (65.52%), Query Frame = 0 
Query:    5 DPSLSML-STEQIQKYLEENKELILAIMEGKSQGKYAEIAPYQTKLQDNLTFLARLAD 61
            D  L +L  T     YL+ENK+LI+AIME ++ GK AE A YQ  LQ NL +LA +AD
Sbjct:   49 DACLMLLFCTFSWLDYLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIAD 106
The following BLAST results are available for this feature:
BLAST of XM_058930720.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-12 (Blastp of Vicia villosa cv. AU Merit v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A9D4WRP7|A0A9D4WRP7_PEA1.152e-10987.37SS18 N-terminal domain-containing protein OS=Pisum... [more]
tr|A0A1S2YDD0|A0A1S2YDD0_CICAR1.829e-8270.50GRF1-interacting factor 3-like OS=Cicer arietinum ... [more]
tr|G7J885|G7J885_MEDTR1.253e-7270.16Putative transcription factor SSXT family OS=Medic... [more]
tr|A0A2Z6NYK1|A0A2Z6NYK1_TRISU1.367e-5973.29SS18 N-terminal domain-containing protein OS=Trifo... [more]
tr|A0A2K3MX10|A0A2K3MX10_TRIPR9.637e-5874.03Grf1-interacting factor 3-like protein OS=Trifoliu... [more]
tr|A0A151RS37|A0A151RS37_CAJCA3.546e-5456.72SS18-like protein 2 OS=Cajanus cajan OX=3821 GN=KK... [more]
tr|V7AW89|V7AW89_PHAVU2.290e-5258.42SS18 N-terminal domain-containing protein OS=Phase... [more]
tr|A0A8B8K0F1|A0A8B8K0F1_ABRPR2.844e-5055.05GRF1-interacting factor 3-like OS=Abrus precatoriu... [more]
tr|A0A4D6NNR6|A0A4D6NNR6_VIGUN1.079e-4857.29SS18 family OS=Vigna unguiculata OX=3917 GN=DEO72_... [more]
tr|A0A3Q0FJF4|A0A3Q0FJF4_VIGRR1.375e-4752.86GRF1-interacting factor 2-like isoform X2 OS=Vigna... [more]
back to top
BLAST of XM_058930720.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-12 (Blastp of Vicia villosa cv. AU Merit v1.0 proteins vs UniProt Swissprot)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q93VH6|GIF3_ARATH2.883e-1452.11GRF1-interacting factor 3 OS=Arabidopsis thaliana ... [more]
sp|Q9MAL9|GIF2_ARATH1.718e-1358.93GRF1-interacting factor 2 OS=Arabidopsis thaliana ... [more]
sp|Q6AVI1|GIF1_ORYSJ8.592e-1250.00GRF-interacting factor 1 OS=Oryza sativa subsp. ja... [more]
sp|A5HEH4|GIF1_MAIZE4.606e-1150.00GRF-interacting factor 1 OS=Zea mays OX=4577 GN=GI... [more]
sp|Q8L8A5|GIF1_ARATH2.058e-1049.25GRF1-interacting factor 1 OS=Arabidopsis thaliana ... [more]
back to top
BLAST of XM_058930720.1 vs. Araport11
Analysis Date: 2024-08-12 (Blastp of Vicia villosa cv. AU Merit v1.0 proteins vs arabidopsis Araport11)
Total hits: 5
Match NameE-valueIdentityDescription
|2.958e-1552.11Symbols: GIF3 | GRF1-interacting factor 3 | chr4:3... [more]
|4.726e-1552.11Symbols: GIF3 | GRF1-interacting factor 3 | chr4:3... [more]
|1.767e-1458.93Symbols: GIF2 | GRF1-interacting factor 2 | chr1:7... [more]
|2.107e-1149.25Symbols: GIF, GIF1, ATGIF1, AN3 | GRF1-INTERACTING... [more]
|1.389e-951.72Symbols: GIF2 | GRF1-interacting factor 2 | chr1:7... [more]
back to top
InterPro
Analysis Name: InterProScan Analysis for Vicia villosa cv. AU Merit genome v1.0
Date Performed: 2024-08-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007726SS18, N-terminalPFAMPF05030SSXTcoord: 11..65
e-value: 2.4E-12
score: 57.6

Sequences
The following sequences are available for this feature:

mRNA sequence

>drVicVill.AUMerit.1.0.rna-XM_058930720.1 ID=drVicVill.AUMerit.1.0.rna-XM_058930720.1; Name=XM_058930720.1; organism=Vicia villosa; type=mRNA; length=570bp
ATGATGAACGGTGATCCTTCTCTCTCCATGTTATCGACCGAACAGATTCA
AAAGTACTTGGAGGAGAATAAGGAGTTGATACTGGCAATAATGGAAGGAA
AAAGCCAAGGGAAGTACGCCGAGATCGCGCCATATCAAACCAAGCTTCAA
GATAACTTGACTTTTCTTGCCAGACTTGCTGATTTTGATTCCCAGCCTGA
GCCTCAGGCACAGATGCATTCTCAGGGACAAGGCATGCAGCGGCTGCCTC
AAGTAGCAATGTCCCAGCAACGACCGGACTTCTCTATCGGAAACACGGCT
TTCGATATGAATGAGCAGCAGCAGCAGCAACAACACTTGGCAATGCCCTC
CCAACAGCCTGATCTTTCAACTTCAAAGTTGGCTTTCCAGATGAATGAGC
AGCAGCACTATAAGCAACCAACTTTCATCCAACAGCGTCAACTTTTCCCT
GAAGGCATGAATAGTTTTTCTGGTACTAACAACAGTAGCATGCAAACAAG
AACCTTTAATCTGCCAGATACCCCATCATTCAACCAAATGGGCTCAGATG
CAGGTCCTGGTTGGTCTTAG
back to top

protein sequence of drVicVill.AUMerit.1.0.rna-XM_058930720.1

>drVicVill.AUMerit.1.0.rna-XM_058930720.1 ID=drVicVill.AUMerit.1.0.rna-XM_058930720.1; Name=drVicVill.AUMerit.1.0.rna-XM_058930720.1; organism=Vicia villosa; type=polypeptide; length=189bp
MMNGDPSLSMLSTEQIQKYLEENKELILAIMEGKSQGKYAEIAPYQTKLQ
DNLTFLARLADFDSQPEPQAQMHSQGQGMQRLPQVAMSQQRPDFSIGNTA
FDMNEQQQQQQHLAMPSQQPDLSTSKLAFQMNEQQHYKQPTFIQQRQLFP
EGMNSFSGTNNSSMQTRTFNLPDTPSFNQMGSDAGPGWS
back to top

mRNA from alignment at LG3:45886613..45892509-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>drVicVill.AUMerit.1.0.rna-XM_058930720.1 ID=drVicVill.AUMerit.1.0.rna-XM_058930720.1; Name=XM_058930720.1; organism=Vicia villosa; type=mRNA; length=5897bp; location=Sequence derived from: LG3:45886613..45892509- (Vicia villosa
CACACGGGCGAATGTAGGCACGCGCGACAGGCATTGTACTTTTGAGACAG
CATCGTTTCGCAGCACCGTAAGAAGAAAGGGTTATTCGTTAAGCCATTTT
CCTGCAATCGAGATAGAAAATGGGGTACGTGCTGAGGGTGAGATTAGCGT
CGTTCTTTACCGGCGCTGCAACGGCGTCGTTTGCAGGTCTCTACATCCTC
CATAGGGATTACAAACTTGCGCATCAATCCCTTACTCAACAGGTTTACAC
AAAATCTCTCATCTATTTTCCTTCGTTTTTTTCTAACATTCTGCCACAAT
ATTTATCTTAATCACGTTGATTAGGATATCTAATGGTGATTAGATTAAGA
TTTAGCTTCATGATTTTTTGGTTAGAGAGAGGAATATAACTGATCCGGCG
ATGATAATCATTTCTGAGTTGAATAATTGGTGTGGCTGTGCCTTCTGTTT
GGCCTCATAAATTTGCTGTTAAGACTTCTTATGTTATGACAATAGTTATA
ACATTTATTAATCATTTCAAATTTAATTGAAGGGGACAATTTACTTGGTT
TATCTAGGGTTAGGAGCTATAGTGTTATCAAATAGCAGCGCTATAGCATA
ATGGGTTTTGATGTATCCGCTATGAAACCGAGACACAGTCCTAATTTTGA
TCTATGTTGTTATTGTTAATACTTAATAGTGCATTATAGTGGAACAATGC
AGCAGCAGTAGGATTTAACATGGCGTTTTTTGCTCGCAAGCCTCTATCAG
CAATAGTGGGTGTAGCAGCCGCAGTTGCAGCCCCAAATCGCAATCGCTTT
TAGGTTTTGGGGGGGAGTCGAAATCATAATTTTTTCAAAAAGTTGTGTTT
TAAAAATGATTTTCATGAAAAGCTATTTGAAATAGCTTCAAAATTAAGTG
ATTTTTTTGAAATTTTGATATCCAAAAGAAGTTTCACTATAATAACATTT
TAAGAATAACTATTCTAACCAAATTTTCATTTGAAGCTTTTATGAAAAGT
TTCTTTCTAATTTTTTTTTTTACACAATTATGTTACACTATAAAAATCAT
TTTTATTAAAAGCCAAAACAAACGGGCCCATAATAACACGGAAGAGTCTA
CATGTGTGCCAAACATGACCTTATTTATAGAGTAGAATAAACTGAAGAAT
TAGTGAGCATTACTCTTATGTTCACCATAATGCATAAACCTTTCAATATA
TAAGCTAAGCTATTTTATGCCTCAATTCCTTTTTAAATTTATATGCAGCA
TGCTTTTTTTGTATGTATAGTTGACCCGTTTCAACCACTATGCGGCTTTT
GCTATTTCCCCCAGTCCGTTAGTAGTAACACTCACAGACCCTCCTACCAA
GAAGCCCTTGTTTTTTAGGATGAGTATATTGTTAATGAGCAGATTGAGTT
TGGATAATTGAGGGGCAATTGTGATATGATATTGGCATTTACTCATATTA
TGTTGAATAAGCTGTGAAACACTGACATCGACCCTAACATGTCGACACCT
ATAGTAACTTAAAAAATGAATAAATTGAATGTAATCACATGTGTCGGTGT
CGGACACCGGACACTCCTATATTTAGAGGTGTCTGGTCGGTGCTATAGAG
AGAATAAGTGTCACATTCAAATTATTTGAAGGTCATTCCCTGGTGCAGTA
ACCTAGGTTTACTTGCTAGGTCACTCATCTCTTTCATACTTGATACAATC
AACACATACTTGTTTCATATATCTTTATTTACTTTTAAGCTTGCCTTTAA
TTTGAGCAAAATCTTTAAGATTGTTCTTTATGCTACCTTCTTTACTGTAT
ATATCTTGCTCCTGAAATTGTCTTGTTTCTCCCTTTCCAATTTCAACTAG
TGCATGGTCTCATAAATTTCCATTTCCTTCTCTTTAAGACTTGTTTTGCA
AATTGGAATATCACCTTCTGTTATCTATCGTATTTATTTTATTCCTTTAA
TTTTACCCTGCAATTTTCTGTTTTATCTTCTTGAATATATCATATATGAC
AAGTGGTCTTATTTTGTTGATTTTGGATTGTTTGGTATATGAACATAACA
GACAGTTTTCATGTGAGGTGTTTATTTGGGACTTAAAGCCGGGGATGAAT
GAATCTAGTTAAACAATCTGTGTATCCTATTGTTATAATAGACTTAGGGA
TTGAGTGTTTCAGTTGTTGCTAGCAATATACATTTGAAGGCATGTGTTGA
AAAATAGCTTGAAGCCTTGAACGAGGGATAAATTGGGAGCTTATAATATA
ACAAGCCTTGAACCATGGTTTAAACTGTGAATGTGTTTTCCATCAAGTAA
AGAAAACAATATTGTTGTTTTTTTTCCTAATTGTACATCATACTACATAT
GATTTTATTTGCATACAGTTTGTTAGGATTACTCTATTAAATTATTAATC
CAAATTACTTAGAAGTTTACACATTGAATTGAACCATATTGTTCACTTCA
TTCTTTTTTGGCAATGGTACATTATTAACTCTTTTGTAATAATCTTTCTT
CTTTCCTCTCTCTAATGTGGTATTCATGGTTCACAACTAGATGCTGGTTT
TTAAATTCATTTTAGTCACATAACTATGGTGAAGGGTGGAAACAATTCCT
TTCAAAAAAAGTGCATAATTCTCATCACACTCCGTGTCGTTGAGGCAGAT
GTGCCAAGCATTTGATTTGTAAACATGGAACAGAGGCCAGTGATATGAAA
TGTTGAAATTGTTTTATGGGGGACACAGTAGAAAGAAGATGTGCAGATTT
GTTGTTTTACAAAAACAGACCGGTGGCTACGGGCTAGATTGTAAAAGGGG
AAACCTTTGGAGGAGAATTCTTTTACCGATTCTCAATCATTCAATAAATT
CATAAGTTACATTTGCTTCTATCACTAGTCTATTTCTCTTCCCTCAGTTC
CTGACAAATTGGTCTGTTCTAGTGGATCTCTCGTGGGGAAGAAATGTAGA
ATTTGAGGTTATTCTGCAAAGAGGTGACCAATAAAGCAGGGATGACAACC
TTGTTTATGTCTTTGTGGAAGTCTAGCATTTTCAAGTTTAAGAAGATGCT
ATATCGGTTGATAAAGGTGCGAGGACTTGATTAATGCAAAAAGGGCAGCG
GGCGCCACCCCCTAAAATTGAAATATTATTGAGGGAATATGAGAAATCAA
GCATACGTCGGATCAGTGGATGAAAAGTTACATGCATGATTGCGAAGCAA
AAAGGTGGAGACACTGCAATCACCTGAGATGGCCTTGTTGCAGCAATATG
AGGAAAATTCTGAAAGCTTCAATAGGAAGTGTAACAATTCTGTTCTCAGG
CAAAGAGGATTGAATTTCCCAGTCCCGATGGCAGTACTCTGTTGGGATGA
GTTGCTGGGACAAAAGAAAAACTCTTTCAGGAGTATTAGGCAAAGCCTTT
GGAGAAAATGCTGAACAAAATTGGTACTGTGGCGGAATCAAAGCATAACT
TACCCCACTTTGGATTATCTTCTGGCCGATTACAGTTTCTTGATAAAAAT
AAGTTTATGATTCTTCATTTACGGAAAAGTTCTTATAAGCTTTTGTTCAC
GCAATGGCAGCCATAGAGATCCAAGTTATATGGGGTGTAGCTACACCGCC
ACCGCCGCATCCACCTCCACCACCATAGCCACGTGCCTTTAGCCATTAGC
CGGCGTATAGTGGCCAGCAGGTTGTCATTAGTAAAGCTGCCACGGGTACG
TAAGACAGACACATCTTACTCGAATTTATGATTTATAGTTGGCTATCAGC
ATAGGAGGTAGGGGTTGTCAACTCAGTATTAGGGGTTGTCAACACAGCAG
GTAGAGGTTGTGCTTGAGTATTAGGGGAGATGGCCGCCTTCAATAATGAG
CGACCAGAATTCGCATCCTGCTAAGTGGATCTGATTCCCCACAGGCTTGC
CCTAAATTGATATCACTATTTAGGTTCATGAGCAAGGAACTGGACATTAG
AATCTGCCTACCATGGTTAATATTTTAACTGGCCAAGCTCAAGTCTATAG
GCAAATGAACTCCAATTATGAAACAAGAGATGGTTTCTATATCTTCCTCA
AGCAGATTATTGCATCGGCTGTCCACATGTCCAGCTTCAGCTCCCAATCA
CAGATTCCACTATCAAAGATCTCTTATTGAGAGGGCCCCCAAAGTTTTCC
TAGGACTTATGTCAAGTTCCATTTTCAAGCTCATGTATTGTATTTCTGAC
TACTCAGGTGTGAAGGTTTTTTGCTGAGCAGAGAGCTGTTGGAACAACTT
ATCTAGTTTCTCCTAGTCCAATTCAAGGTCGGACCTCTTTGGGGCCAACC
AAGAGCACATTTGGCCCTACCCAGAATTTAGACAGGAAAGAGATGGTAGG
GAGTCAAACTAGTTTTCGAACGGATGAAGAAGTATACTATACTGACTGGT
TTTGGAAAATTGGTGATATGAAACCTATCGCCTGACCACTTTCAAGTTTC
AACCTTGAAGGCAATGTGTTAGAACTGGTAATTTTCTAAAATAAATTACT
TGTATTATGCACAAAGAAGGTTGAGCTCCAGCCAACGGGGCAAGAACTAA
ACCAGTGTACAAAATATGAACAAACTATCTAAGGCATTTTAGAGGCCTTT
TCTCCCCCACACAGTGACTTGCCCCCTAATACTTTTTTTAATAATCCCTA
ATACTAACCGACTTCTATTTATCATTTCCTTCTGTAACTAGCTTCCTCTC
TTCTAACAGCTGTTGCTTCCTTACTAACAACTGTTACAATTATTAATTCC
CCTGAAGTAACTTAGACTCCTTTCTAGCCAAAGACTTGCAACTGTAAGGG
TGTAACTTTAAATACACCATATCTCTCGTTAAAATCCAACTCTTGTCAGC
TTGCAGCTCTGTTCTCTCTGGCCTTCACTAATTTTTTTTTTTTTTTAACT
CATCCGAAAGTTGATCCAGCTCTTCAAGCAGTAGGTTATTCTTCAGATTG
AAGGGTATAATAAACGGAGTTCATATAAGTAGGAAAATTAGTCAGTGGGG
GGATACTTGATTGAATAAATAGGGAGGAATAATAGAGAGGAAACATGGGT
ATTTGTCACTTTGGAAAAATATAGTGGTGATTCAGTTGTAAAAAGGGGGA
ACCTCGAAGGAGAGTTGTATTTCCTATTTTCGACCACCAAATAAATTGTA
TTTCCTATTTTCGGCCATCAAATGAAATTGTTCCTTTGCGTTTGTTTGTT
TCTATCAATTCATACTAATATATACATTCCACTGCATGGCACAATGTTAA
AACTTGCTCTGAGTAGCTGTGACTTATGCTGCCAGTTATTGAGTAGCTTT
TCCGCATTTCACAGGAATTAGGCATACATCAACCTATCTAAACCATGAAC
TATTTCTTTATCCTTAAGTATTCTTGGCTATGCACTTCTCACATTTTAAG
TATGAGAAGAAATGGTGGGGATTGTTTGACAACATGAATATTAAGTTTTA
CCAATCATATATTGGTTCAATAAGTTACTGAACTTTCTTTGCTTTTGCAG
ACGAATGGTCTCTACGAATCACTTAACAGTCGAATTTCTTCATTGGAAAA
ACTCAAACAAACTGAAACTTCGCAACAGGCGGAAGCTACAGAATAAGTAT
GCGGATTGAGGCATCTGTTGTAGTTAATTGTCGTGGTAGAAGTTTTATCG
AATCTACTCCCTGCGACAAGTGACTTGTAAGGAGTAAAGTTTAATTTCTC
GCATTTTAACTTTCTTACCATAAGTGTCCGGACCAGTTCTGTATTCTGAT
GTATGATTACCCTTTCACCAACAATAATGCTATATTTGAGAATTGAGAGA
TAGATTAAGTTATGACAGAGACTTATATTACTGTTTGCAATAAGCAAAAT
AAGTACGATTTTTATTGGGTGTGAATTTCTTGTCATTATTTGAGGCA
back to top

Coding sequence (CDS) from alignment at LG3:45886613..45892509-

>drVicVill.AUMerit.1.0.rna-XM_058930720.1 ID=drVicVill.AUMerit.1.0.rna-XM_058930720.1; Name=XM_058930720.1; organism=Vicia villosa; type=CDS; length=219bp; location=Sequence derived from: LG3:45886613..45892509- (Vicia villosa
ATGGGGTACGTGCTGAGGGTGAGATTAGCGTCGTTCTTTACCGGCGCTGC
AACGGCGTCGTTTGCAGGTCTCTACATCCTCCATAGGGATTACAAACTTG
CGCATCAATCCCTTACTCAACAGACGAATGGTCTCTACGAATCACTTAAC
AGTCGAATTTCTTCATTGGAAAAACTCAAACAAACTGAAACTTCGCAACA
GGCGGAAGCTACAGAATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR007726SS18_N