evm.model.Chr10.856

Transcript Overview
Nameevm.model.Chr10.856
Unique Nameevm.model.Chr10.856_hau_v1
TypemRNA
OrganismVigna unguiculata subsp. sesquipedalis ()
Sequence length483
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr10chromosomeChr10:30707238..30710808 +Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
anvuaL0004Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuaL0126Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuaL0196Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuaL0239Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuaL0983Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuaL269Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuaL270Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuaL272Vigna angularis Jingnong 6 genome v1.1Vigna angularis
caivuaL636Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuaL162Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuaL438Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuaL0757Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuaL1145Cajanus cajan Asha genome v1.0Cajanus cajan
psvuaL172Pisum sativum Cameor genome v1aPisum sativum
crvuaL583Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvuaL625Pisum sativum Cameor genome v1aPisum sativum
pvvuaL081Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvuaL009Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvuaL010Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvuaL123Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuaL124Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvuaL188Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvuaL358Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuaL359Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuaL577Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvuaL497Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuaL185Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvuaL497Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vuavuaR054Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuazwsR063Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuazwsR085Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vssvuaL148Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaL040Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvuaL074Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vssvuaL257Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuaL268Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaL219Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvuaL256Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vssvuaL559Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuaL561Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuaL562Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuaL569Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvuaL139Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuaL397Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Vigun10g091400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
evm.TU.Chr10.856evm.TU.Chr10.856_hau_v1Vigna unguiculata subsp. sesquipedalisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
evm.model.Chr10.856.exon1evm.model.Chr10.856.exon1_hau_v1Vigna unguiculata subsp. sesquipedalisexon
evm.model.Chr10.856.exon2evm.model.Chr10.856.exon2_hau_v1Vigna unguiculata subsp. sesquipedalisexon
evm.model.Chr10.856.exon3evm.model.Chr10.856.exon3_hau_v1Vigna unguiculata subsp. sesquipedalisexon
evm.model.Chr10.856.exon4evm.model.Chr10.856.exon4_hau_v1Vigna unguiculata subsp. sesquipedalisexon
evm.model.Chr10.856.exon5evm.model.Chr10.856.exon5_hau_v1Vigna unguiculata subsp. sesquipedalisexon
evm.model.Chr10.856.exon6evm.model.Chr10.856.exon6_hau_v1Vigna unguiculata subsp. sesquipedalisexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.evm.model.Chr10.856cds.evm.model.Chr10.856_hau_v1Vigna unguiculata subsp. sesquipedalisCDS
cds.evm.model.Chr10.856cds.evm.model.Chr10.856_hau_v1_2Vigna unguiculata subsp. sesquipedalisCDS
cds.evm.model.Chr10.856cds.evm.model.Chr10.856_hau_v1_3Vigna unguiculata subsp. sesquipedalisCDS
cds.evm.model.Chr10.856cds.evm.model.Chr10.856_hau_v1_4Vigna unguiculata subsp. sesquipedalisCDS
cds.evm.model.Chr10.856cds.evm.model.Chr10.856_hau_v1_5Vigna unguiculata subsp. sesquipedalisCDS
cds.evm.model.Chr10.856cds.evm.model.Chr10.856_hau_v1_6Vigna unguiculata subsp. sesquipedalisCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
evm.model.Chr10.856_hau_v1evm.model.Chr10.856_hau_v1Vigna unguiculata subsp. sesquipedalispolypeptide
evm.model.Chr10.856_hau_v1evm.model.Chr10.856_hau_v1-proteinVigna unguiculata subsp. sesquipedalispolypeptide


Homology
[Close]
BLAST of evm.model.Chr10.856 vs. UniProtKB/Swiss-Prot
Match: sp|Q2HIM5|MMGT_ARATH (Membrane magnesium transporter OS=Arabidopsis thaliana OX=3702 GN=At5g03345 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.948e-19
Identity = 40/61 (65.57%), Postives = 44/61 (72.13%), Query Frame = 0 
Query:   59 RGLLKITEEEFSGPPYNVVIELFVGLLLCFRAALTVPGKFKSIHPHSEENRFVAYSIGVDF 119
            RGLLKI EEEFS PP NV++EL +GL LC  AALT PGKF SIHP S+ENR V      DF
Sbjct:   26 RGLLKIMEEEFSRPPINVILELIIGLALCMWAALTFPGKFLSIHPDSDENRAVFLPDNSDF 86
[Close]
BLAST of evm.model.Chr10.856 vs. UniProtKB/Swiss-Prot
Match: sp|P27057|GAST1_SOLLC (Protein GAST1 OS=Solanum lycopersicum OX=4081 GN=GAST1 PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 2.586e-11
Identity = 26/50 (52.00%), Postives = 35/50 (70.00%), Query Frame = 0 
Query:    8 VYGGGEGSLTVQECPRACDYRCSKANARQACLFYCNLCCDKCLCVPSGTF 57
            +YG  EG L  Q+C   C YRCSK + ++ C+F+C  CC KCLCVP+GT+
Sbjct:   41 LYGVSEGRLHPQDCQPKCTYRCSKTSYKKPCMFFCQKCCAKCLCVPAGTY 90
[Close]
BLAST of evm.model.Chr10.856 vs. Araport11
Match: AT5G03345.2 (| membrane magnesium transporter-like protein | Chr5:814196-814715 FORWARD LENGTH=105 | 201606)

HSP 1 Score: 81.6481 bits (200), Expect = 1.580e-20
Identity = 38/52 (73.08%), Postives = 42/52 (80.77%), Query Frame = 0 
Query:   60 GLLKITEEEFSGPPYNVVIELFVGLLLCFRAALTVPGKFKSIHPHSEENRFV 111
            GLLKI EEEFS PP NV++EL +GL LC  AALT PGKF SIHP S+ENRFV
Sbjct:   27 GLLKIMEEEFSRPPINVILELIIGLALCMWAALTFPGKFLSIHPDSDENRFV 78
[Close]
BLAST of evm.model.Chr10.856 vs. Araport11
Match: AT5G03345.1 (| membrane magnesium transporter-like protein | Chr5:814196-815478 FORWARD LENGTH=104 | 201606)

HSP 1 Score: 81.2629 bits (199), Expect = 1.993e-20
Identity = 40/61 (65.57%), Postives = 44/61 (72.13%), Query Frame = 0 
Query:   59 RGLLKITEEEFSGPPYNVVIELFVGLLLCFRAALTVPGKFKSIHPHSEENRFVAYSIGVDF 119
            RGLLKI EEEFS PP NV++EL +GL LC  AALT PGKF SIHP S+ENR V      DF
Sbjct:   26 RGLLKIMEEEFSRPPINVILELIIGLALCMWAALTFPGKFLSIHPDSDENRAVFLPDNSDF 86
[Close]
BLAST of evm.model.Chr10.856 vs. Araport11
Match: AT5G15230.1 (| GAST1 protein homolog 4 | Chr5:4945017-4946025 FORWARD LENGTH=106 | 201606)

HSP 1 Score: 55.8398 bits (133), Expect = 1.208e-10
Identity = 24/46 (52.17%), Postives = 29/46 (63.04%), Query Frame = 0 
Query:   12 GEGSLTVQECPRACDYRCSKANARQACLFYCNLCCDKCLCVPSGTF 57
            G GSL   +CP  CD RC K    +AC+ +CN CC KCLCVP G +
Sbjct:   39 GPGSLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYY 84
[Close]
BLAST of evm.model.Chr10.856 vs. Araport11
Match: AT5G15230.2 (| GAST1 protein homolog 4 | Chr5:4945286-4946025 FORWARD LENGTH=83 | 201606)

HSP 1 Score: 54.299 bits (129), Expect = 2.657e-10
Identity = 24/46 (52.17%), Postives = 29/46 (63.04%), Query Frame = 0 
Query:   12 GEGSLTVQECPRACDYRCSKANARQACLFYCNLCCDKCLCVPSGTF 57
            G GSL   +CP  CD RC K    +AC+ +CN CC KCLCVP G +
Sbjct:   16 GPGSLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYY 61
[Close]
BLAST of evm.model.Chr10.856 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MRM8|A0A4D6MRM8_VIGUN (Magnesium transporter OS=Vigna unguiculata OX=3917 GN=DEO72_LG8g1458 PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 1.196e-66
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 
Query:   59 RGLLKITEEEFSGPPYNVVIELFVGLLLCFRAALTVPGKFKSIHPHSEENRFVAYSIGVDFGAIGSAYIAFFVNIYASSPFLGRNLSPGKPNGLYGVTGPHL 160
            RGLLKITEEEFSGPPYNVVIELFVGLLLCFRAALTVPGKFKSIHPHSEENRFVAYSIGVDFGAIGSAYIAFFVNIYASSPFLGRNLSPGKPNGLYGVTGPHL
Sbjct:   23 RGLLKITEEEFSGPPYNVVIELFVGLLLCFRAALTVPGKFKSIHPHSEENRFVAYSIGVDFGAIGSAYIAFFVNIYASSPFLGRNLSPGKPNGLYGVTGPHL 124
[Close]
BLAST of evm.model.Chr10.856 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MQD4|A0A4D6MQD4_VIGUN (Gibberellin regulated protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG8g981 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.426e-30
Identity = 54/57 (94.74%), Postives = 55/57 (96.49%), Query Frame = 0 
Query:    1 MAFVTQLVYGGGEGSLTVQECPRACDYRCSKANARQACLFYCNLCCDKCLCVPSGTF 57
            MA VTQL+YGGGEGSLTVQ CPRACDYRCSKANARQACLFYCNLCCDKCLCVPSGTF
Sbjct:    1 MASVTQLIYGGGEGSLTVQGCPRACDYRCSKANARQACLFYCNLCCDKCLCVPSGTF 57
[Close]
BLAST of evm.model.Chr10.856 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6M974|A0A4D6M974_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g2643 PE=4 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.215e-27
Identity = 50/52 (96.15%), Postives = 51/52 (98.08%), Query Frame = 0 
Query:   58 DRGLLKITEEEFSGPPYNVVIELFVGLLLCFRAALTVPGKFKSIHPHSEENR 109
            DRGLLKITEEEFSGPPYNVVIELFVGL+LCF AALTVPGKFKSIHPHSEENR
Sbjct:   24 DRGLLKITEEEFSGPPYNVVIELFVGLMLCFWAALTVPGKFKSIHPHSEENR 75
[Close]
BLAST of evm.model.Chr10.856 vs. UniProtKB/TrEMBL
Match: tr|V7CX58|V7CX58_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G178800g PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.709e-26
Identity = 49/61 (80.33%), Postives = 55/61 (90.16%), Query Frame = 0 
Query:   59 RGLLKITEEEFSGPPYNVVIELFVGLLLCFRAALTVPGKFKSIHPHSEENRFVAYSIGVDF 119
            +GLLKITE+EFSGPP+NVVIELFVGLLLCF AALTVPGKF+SIHPHSEENR V+    +DF
Sbjct:   26 KGLLKITEDEFSGPPFNVVIELFVGLLLCFWAALTVPGKFQSIHPHSEENRIVSLPANLDF 86
[Close]
BLAST of evm.model.Chr10.856 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3TNQ6|A0A1S3TNQ6_VIGRR (membrane magnesium transporter OS=Vigna radiata var. radiata OX=3916 GN=LOC106757235 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.699e-26
Identity = 51/61 (83.61%), Postives = 54/61 (88.52%), Query Frame = 0 
Query:   59 RGLLKITEEEFSGPPYNVVIELFVGLLLCFRAALTVPGKFKSIHPHSEENRFVAYSIGVDF 119
            RGLLKITEEEFSGPP+NVVIELFVGLLLCF AALTVPGKFKSI PHSEENR V+    +DF
Sbjct:   26 RGLLKITEEEFSGPPFNVVIELFVGLLLCFWAALTVPGKFKSILPHSEENRIVSLPANLDF 86
[Close]
BLAST of evm.model.Chr10.856 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3RYQ6|A0A0S3RYQ6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G330900 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.975e-25
Identity = 50/61 (81.97%), Postives = 53/61 (86.89%), Query Frame = 0 
Query:   59 RGLLKITEEEFSGPPYNVVIELFVGLLLCFRAALTVPGKFKSIHPHSEENRFVAYSIGVDF 119
            RGLLKITEEEFSGPP+NVVIELFVGLLLCF AALTVPG FKSI PHSEENR V+    +DF
Sbjct:   26 RGLLKITEEEFSGPPFNVVIELFVGLLLCFWAALTVPGNFKSILPHSEENRIVSLPANLDF 86
[Close]
BLAST of evm.model.Chr10.856 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TGQ1|A0A0L9TGQ1_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan641s009200 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.975e-25
Identity = 50/61 (81.97%), Postives = 53/61 (86.89%), Query Frame = 0 
Query:   59 RGLLKITEEEFSGPPYNVVIELFVGLLLCFRAALTVPGKFKSIHPHSEENRFVAYSIGVDF 119
            RGLLKITEEEFSGPP+NVVIELFVGLLLCF AALTVPG FKSI PHSEENR V+    +DF
Sbjct:   26 RGLLKITEEEFSGPPFNVVIELFVGLLLCFWAALTVPGNFKSILPHSEENRIVSLPANLDF 86
[Close]
BLAST of evm.model.Chr10.856 vs. UniProtKB/TrEMBL
Match: tr|A0A445FM08|A0A445FM08_GLYSO (Protein GAST1 OS=Glycine soja OX=3848 GN=D0Y65_047080 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.931e-25
Identity = 47/57 (82.46%), Postives = 52/57 (91.23%), Query Frame = 0 
Query:    1 MAFVTQLVYGGGEGSLTVQECPRACDYRCSKANARQACLFYCNLCCDKCLCVPSGTF 57
            MAFVTQ+ YGGGEGSLT QECP ACDYRCSKA AR+ACL++CNLCC KCLCVPSGT+
Sbjct:   14 MAFVTQVAYGGGEGSLTPQECPGACDYRCSKARARKACLYFCNLCCAKCLCVPSGTY 70
[Close]
BLAST of evm.model.Chr10.856 vs. UniProtKB/TrEMBL
Match: tr|K7MP57|K7MP57_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_18G001200 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.931e-25
Identity = 47/57 (82.46%), Postives = 52/57 (91.23%), Query Frame = 0 
Query:    1 MAFVTQLVYGGGEGSLTVQECPRACDYRCSKANARQACLFYCNLCCDKCLCVPSGTF 57
            MAFVTQ+ YGGGEGSLT QECP ACDYRCSKA AR+ACL++CNLCC KCLCVPSGT+
Sbjct:   14 MAFVTQVAYGGGEGSLTPQECPGACDYRCSKARARKACLYFCNLCCAKCLCVPSGTY 70
[Close]
BLAST of evm.model.Chr10.856 vs. UniProtKB/TrEMBL
Match: tr|A0A445FIC3|A0A445FIC3_GLYSO (Membrane magnesium transporter OS=Glycine soja OX=3848 GN=D0Y65_051864 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.174e-24
Identity = 47/61 (77.05%), Postives = 53/61 (86.89%), Query Frame = 0 
Query:   59 RGLLKITEEEFSGPPYNVVIELFVGLLLCFRAALTVPGKFKSIHPHSEENRFVAYSIGVDF 119
            RGLLKITEEEFSGPP++VVIELF+GLLLCF AALT PGKF SIHPHSE+NR V+    +DF
Sbjct:   26 RGLLKITEEEFSGPPFDVVIELFLGLLLCFWAALTAPGKFLSIHPHSEDNRIVSLPANLDF 86
The following BLAST results are available for this feature:
BLAST of evm.model.Chr10.856 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs UniProt Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
sp|Q2HIM5|MMGT_ARATH1.948e-1965.57Membrane magnesium transporter OS=Arabidopsis thal... [more]
sp|P27057|GAST1_SOLLC2.586e-1152.00Protein GAST1 OS=Solanum lycopersicum OX=4081 GN=G... [more]
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BLAST of evm.model.Chr10.856 vs. Araport11
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs arabidopsis Araport11)
Total hits: 4
Match NameE-valueIdentityDescription
AT5G03345.21.580e-2073.08| membrane magnesium transporter-like protein | Ch... [more]
AT5G03345.11.993e-2065.57| membrane magnesium transporter-like protein | Ch... [more]
AT5G15230.11.208e-1052.17| GAST1 protein homolog 4 | Chr5:4945017-4946025 F... [more]
AT5G15230.22.657e-1052.17| GAST1 protein homolog 4 | Chr5:4945286-4946025 F... [more]
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BLAST of evm.model.Chr10.856 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A4D6MRM8|A0A4D6MRM8_VIGUN1.196e-66100.00Magnesium transporter OS=Vigna unguiculata OX=3917... [more]
tr|A0A4D6MQD4|A0A4D6MQD4_VIGUN2.426e-3094.74Gibberellin regulated protein OS=Vigna unguiculata... [more]
tr|A0A4D6M974|A0A4D6M974_VIGUN2.215e-2796.15Uncharacterized protein OS=Vigna unguiculata OX=39... [more]
tr|V7CX58|V7CX58_PHAVU1.709e-2680.33Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|A0A1S3TNQ6|A0A1S3TNQ6_VIGRR2.699e-2683.61membrane magnesium transporter OS=Vigna radiata va... [more]
tr|A0A0S3RYQ6|A0A0S3RYQ6_PHAAN1.975e-2581.97Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A0L9TGQ1|A0A0L9TGQ1_PHAAN1.975e-2581.97Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|A0A445FM08|A0A445FM08_GLYSO3.931e-2582.46Protein GAST1 OS=Glycine soja OX=3848 GN=D0Y65_047... [more]
tr|K7MP57|K7MP57_SOYBN3.931e-2582.46Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A445FIC3|A0A445FIC3_GLYSO1.174e-2477.05Membrane magnesium transporter OS=Glycine soja OX=... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0
Date Performed: 2023-06-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003854Gibberellin regulated proteinPFAMPF02704GASAcoord: 20..57
e-value: 1.7E-11
score: 44.1

Sequences
The following sequences are available for this feature:

mRNA sequence

>evm.model.Chr10.856_hau_v1 ID=evm.model.Chr10.856_hau_v1; Name=evm.model.Chr10.856; organism=Vigna unguiculata subsp. sesquipedalis; type=mRNA; length=483bp
ATGGCTTTTGTAACTCAACTTGTTTATGGTGGTGGTGAAGGATCTCTTAC
AGTTCAAGAGTGTCCTAGAGCATGTGACTATCGTTGTTCAAAGGCTAATG
CTAGGCAAGCATGTTTGTTCTATTGTAACTTGTGTTGTGACAAGTGTTTG
TGTGTTCCATCAGGAACATTTGACAGGGGTCTGTTGAAGATTACAGAGGA
GGAGTTTTCAGGGCCTCCATATAATGTGGTGATTGAGCTGTTTGTTGGAC
TGCTGCTTTGTTTCAGGGCTGCGCTCACTGTGCCCGGGAAGTTTAAATCC
ATTCACCCTCACTCCGAGGAGAACAGATTTGTTGCTTATTCCATAGGTGT
TGATTTTGGTGCCATTGGATCTGCCTATATTGCTTTCTTTGTCAACATAT
ACGCTTCTAGTCCTTTTCTGGGTAGAAATTTATCACCAGGCAAGCCAAAT
GGTTTGTATGGGGTTACTGGTCCTCACCTTTGA
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protein sequence of evm.model.Chr10.856_hau_v1

>evm.model.Chr10.856_hau_v1 ID=evm.model.Chr10.856_hau_v1; Name=evm.model.Chr10.856_hau_v1; organism=Vigna unguiculata subsp. sesquipedalis; type=polypeptide; length=160bp
MAFVTQLVYGGGEGSLTVQECPRACDYRCSKANARQACLFYCNLCCDKCL
CVPSGTFDRGLLKITEEEFSGPPYNVVIELFVGLLLCFRAALTVPGKFKS
IHPHSEENRFVAYSIGVDFGAIGSAYIAFFVNIYASSPFLGRNLSPGKPN
GLYGVTGPHL
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mRNA from alignment at Chr10:30707238..30710808+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>evm.model.Chr10.856_hau_v1 ID=evm.model.Chr10.856_hau_v1; Name=evm.model.Chr10.856; organism=Vigna unguiculata subsp. sesquipedalis; type=mRNA; length=3571bp; location=Sequence derived from: Chr10:30707238..30710808+ (Vigna unguiculata subsp. sesquipedalis
ATGGCTTTTGTAACTCAACTTGTTTATGTGAGTCTCTTCTCTCCTACATA
TTTTCCTTACATCTTTACTATTTACATTTCTTCTTATTTATTTAGATTCA
TTTGAAAAAGCTTAAGATGGTAAGTATATCGTAGTTTCAATTGCATTCTT
CAATTCTAATTCTTTTTTTCTTTTGCATGTTTAGGGTGGTGGTGAAGGAT
CTCTTACAGTTCAAGGTATTAATTTTAGTTCAATCTTTGAAAAATATCTA
GCTAAATTAAATTTTTAGTTTTTCTATAAAATTTGAATAATTTTAATGGT
GTTTGTTAAACATTTGTATTCTGTATTGTTTTTTTTTTAATTTAAATTCA
TGTATACTGTCGTAATTGGTTACATGTTTTATTTCAGAGTGTCCTAGAGC
ATGTGACTATCGTTGTTCAAAGGCTAATGCTAGGCAAGCATGTTTGTTCT
ATTGTAACTTGTGTTGTGACAAGTGTTTGTGTGTTCCATCAGGAACATTT
GGTAATAAGGAAGAATGTCCATGTTATAACAACTGGAAAAATAAGGAAGG
AAAACCTAAGTGTCCTTGATTTATCTTCAATTTTTTTCTTATCAACTTCA
ATTCTATACTTTAATTTTCTTGATATATATGGTATTGTACCTCAATAATT
AAATAAATGTTTGTGCTTCTTTTACTTTTCATACATCTTTTCTTCATAAT
GTTCTATAATCTTTTATATTTATATTAGTTTATACATGTCAATATTACTT
TACATAAATTATGTAAATGGTGCTAAATTTAATTATGTATTTTAAATTAT
TTTTAAAATGTATTTTCATATGACATATTTTCAATGAAACTAAAATTAAT
TAATTAATATGTTATGTAATTCTTGTAAAATTTAAATGCCAATGTTAAGA
TAATAATTGATTGATAATGTAAAGCACTAAATGATTATTAATGGAAAATT
ATTTAATACTTTCTTCCCTTTTTAATAGTCCGATTTTCGAGTTTAATAAA
ATATCGATTTTTTTTCAATTATAGTTACTCTTCATTTCACTTTTAATTAT
ATTTCATATTATACTTACTATTATATGAAAATAAAAAAGAGTGAAAGTAA
AGAATTATAGGTATTTTCATAAAATGAAGCAACTTCTTAGATTTCATAAA
ATATTTTAATAGTTATTAGGGTTTCAATACGGTGATGGTAAATAAATTTG
TTCATGCTGTTCAAATTTATTATGATTTTGACGGAAAGTTCGTTAACTAG
GTGAGAATAAGATGAATATTTTCTATAATAATAAAGGAAATTCTTTTTTT
TTATCCACAATTCATAATACTTTGTTATTTTAAAAATTTATTATTTTATA
AATAATTTATTTTTAATCATTTTTTTTATATATCTTTTTTTTTTTAATCA
TTTCTCTCTTTTATATTAAATCATTATTAAAATTTTTTTTTTACATATTT
TTCTTCTAAAATTTTATTTTTAACAATTATTTTAAAAATTATATATTTAT
TATTAATTTTAAATTTTTTTAAAATTAAAAAATGCGAACACACAGACGTA
ACATGTTGTGCTGTGTGTTTGCTAGTATATATATATATATATATATATAT
ATATATATATATATATATATATATATATTAGTTATAGTTATATAAATGTT
ATATAGATAGTTACACAGGCGTAACTAATTACATTTATTAAAAATGTTAT
AGTTATATTTTTTAAAATTGTTATCGTAAAAAATATTAATATTAATATTA
ATATTGTAACACTTTTTTAAAATGTCATTATAGATAATTACGCTTTTTTC
TGTTTTTACTAGCATTTGTGTAATCACATCTACTAAAAATGTTAAAAATG
TTACTATATGTCCTAATATTGCAACATATTTTAAAAATGTTACTGTAAAT
AAATAAATATACGGTATAATATCAGTATTATCAGAAATTAATTAAATATA
AAATAATAATAATGCATGCATTGTTAAGAAGTAAATTAAAAATTATTTTT
TAGTCATTTTTATTTATTTTATAAACTAAATTTTAATCGATAAAAATAAT
TAAAATAGAAACTAACTTTTAATTTTTAATTATTGTAATATAAAAAAATT
GATTTTTTGTATCTTTATTCTCAAAATTTAGATGTTGATTTTCTAGTAAC
TAAAATTCGTAAAACCATTTTTTTTCCTTAGGGTTGTTGATTCACCATCT
TCCGAACACTTTTCCGTCCTCTCCGCCACTTTGGAATCTTCAGAACACCA
TCTCTGCACGTCTCGTTTGTGGCTGCCGCAACGCATCACCAAAACCGACG
TTCGCGTCGATAGTCGCTAACACCTCCAGTCATCACCGTTAGTGTTGCTG
TTAGAGATCGTGTGTGAGGCTTTTGTTCTTTCTCAATTTCAAACTTGCAT
TTCAAGTGACTTTCTTTTAGGTTTGTTTGTATAAATTGATTTTATTGCTT
TTTGTTTTGTGTCCAATATTTTGGAGTTTAGTCAATAGGTGTTGATTGAG
TATAAAATTAGCGTTTGTGGCCGATGATAGAAAATCCTGTGAAGGTGTTC
TATGTTCTGGTTCACGCCGCTTATTCAACTATCCACTGTATTCTACAACC
GATTCTTACGATTGTTTTACTTTTTATTATGTGTTTGAGCGTTATGGCTC
GTGGATCTGAAATTGGATCTGATTTTTGTTCCAGACAGGGGTCTGTTGAA
GATTACAGAGGAGGAGTTTTCAGGGCCTCCATATAATGTAATTTGATTAA
CGCTACAACTAGGGTTTAATTTCATGTAATGTATCTAATTTTTATTTTAG
TTTGGAATAATGCAGGTGGTGATTGAGCTGTTTGTTGGACTGCTGCTTTG
TTTCAGGGCTGCGCTCACTGTGCCCGGGAAGTTTAAATCCATTCACCCTC
ACTCCGAGGAGAACAGGTAACTAAAATTAATGCTAGGATGGATGTAGCTG
TAACCAGATGAATGTGAACTTATGAAACTGATTGTGAAATAACATCTCTT
ATTTCTATGTTTTTGTTTGGATTAGATGTGGTGAATGGTCTTCTAGGAGA
ATTAAATTTTTAATTATTAGTTTTGGAATATTGAATTTTATGTTAGGACT
ATCGTTGTATCTTCAATTTTGCCTCAGAACTTGTATTTCATTGATACAGA
TCAAGAAATAGAGATTTTTGTGTCAATGTACATTGTTTTATTTCCATACT
CTAATCCAGTTCTATTACCGGAGTCCATTATTAGGGGTCACTTAAGTTAC
TCTTGTCAAGTTCTGAATTCATACTCTGTTGGTAGATTATGGGTGGCTGG
GTTTGATTTGACTAATATACTCACTATCCACATCATTAATAAAAAATGAG
AAAGAAAAAGGGATCTGCCTGTATTGGATCTGTTTTTAAATAATATACTG
GTATGTTGATGCAGATTTGTTGCTTATTCCATAGGTGTTGATTTTGGTGC
CATTGGATCTGCCTATATTGCTTTCTTTGTCAACATATACGCTTCTAGTC
CTTTTCTGGGTAGAAATTTATCACCAGGCAAGCCAAATGGTTTGTATGGG
GTTACTGGTCCTCACCTTTGA
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Coding sequence (CDS) from alignment at Chr10:30707238..30710808+

>evm.model.Chr10.856_hau_v1 ID=evm.model.Chr10.856_hau_v1; Name=evm.model.Chr10.856; organism=Vigna unguiculata subsp. sesquipedalis; type=CDS; length=483bp; location=Sequence derived from: Chr10:30707238..30710808+ (Vigna unguiculata subsp. sesquipedalis
ATGGCTTTTGTAACTCAACTTGTTTATGGTGGTGGTGAAGGATCTCTTAC
AGTTCAAGAGTGTCCTAGAGCATGTGACTATCGTTGTTCAAAGGCTAATG
CTAGGCAAGCATGTTTGTTCTATTGTAACTTGTGTTGTGACAAGTGTTTG
TGTGTTCCATCAGGAACATTTGACAGGGGTCTGTTGAAGATTACAGAGGA
GGAGTTTTCAGGGCCTCCATATAATGTGGTGATTGAGCTGTTTGTTGGAC
TGCTGCTTTGTTTCAGGGCTGCGCTCACTGTGCCCGGGAAGTTTAAATCC
ATTCACCCTCACTCCGAGGAGAACAGATTTGTTGCTTATTCCATAGGTGT
TGATTTTGGTGCCATTGGATCTGCCTATATTGCTTTCTTTGTCAACATAT
ACGCTTCTAGTCCTTTTCTGGGTAGAAATTTATCACCAGGCAAGCCAAAT
GGTTTGTATGGGGTTACTGGTCCTCACCTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR003854GASA