rna-XM_004496092.3

Transcript Overview
Namerna-XM_004496092.3
Unique Namerna-XM_004496092.3_CaCDCfrontier-NCBI_v1
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length435
Productcyclin-dependent protein kinase inhibitor SMR2
References
External references for this mRNA
DatabaseAccession
GeneID101503936
GenBankXM_004496092.3
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr4chromosomechr4:8892550..8893396 -Cicer arietinum CDC Frontier NCBI RefSeq v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ancanL0147Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0162Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cacanL131Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancanL0629Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0779Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caicanL0377Cicer arietinum ICC 4958 genome v2Cicer arietinum
canccR0384Cajanus cajan Asha genome v1.0Cajanus cajan
cancrR341Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
canvrvR311Vigna radiata cv. VC1973A genome v6.0Vigna radiata
canpvR332Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cantifR260Vicia faba cv. Tiffany genome v1.0Vicia faba
canvfhR269Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canvrvR349Vigna radiata cv. VC1973A genome v6.0Vigna radiata
canpvR371Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvssR262Vicia sativa cv. Studenica genome v1.0Vicia sativa
canzwsR238Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuR266Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvuaR259Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuaR266Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuR295Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canpsR284Pisum sativum Cameor genome v1aPisum sativum
canpsR294Pisum sativum Cameor genome v1aPisum sativum
avjcanL310Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL344Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cancarR212Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Psat6g173960.1Pisum sativum Cameor genome v1aPisum sativum
Cr_08352.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-TanjilR_01676Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_014657100.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vfaba.Hedin2.R1.3g107040.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
jg41807.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-KK1_023070Cajanus cajan Asha genome v1.0Cajanus cajan
Psat06G0471700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-TanjilR_19429Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_05172Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Va02G058780.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vfaba.Tiffany.R1.3g086040.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-TanjilR_17652Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun07g190400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
evm.model.Chr07.933Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Ca_08386Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Ca_10022.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC101503936gene-LOC101503936_CaCDCfrontier-NCBI_v1Cicer arietinumgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_004496092.3-1exon-XM_004496092.3-1_CaCDCfrontier-NCBI_v1Cicer arietinumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_004496149.1cds-XP_004496149.1_CaCDCfrontier-NCBI_v1Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_004496092.3_CaCDCfrontier-NCBI_v1rna-XM_004496092.3_CaCDCfrontier-NCBI_v1Cicer arietinumpolypeptide
rna-XM_004496092.3_CaCDCfrontier-NCBI_v1rna-XM_004496092.3_CaCDCfrontier-NCBI_v1-proteinCicer arietinumpolypeptide


Homology
BLAST of rna-XM_004496092.3 vs. Araport11
Match: | (Symbols: SMR6 | | chr5:16202465-16202803 FORWARD LENGTH=112)

HSP 1 Score: 47.7506 bits (112), Expect = 1.273e-7
Identity = 19/36 (52.78%), Postives = 29/36 (80.56%), Query Frame = 0
Query:   82 TPTSKESKIPEIMTCPPAPKKPKPFVSCKRKLMDEF 117
            TPT+KE+KIPE++ CPPAP+K +P + C+  ++ EF
Sbjct:   62 TPTAKETKIPELLECPPAPRKRRPALKCRSNVVREF 97          
BLAST of rna-XM_004496092.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XXP8|A0A1S2XXP8_CICAR (Cyclin-dependent protein kinase inhibitor SMR2 OS=Cicer arietinum OX=3827 GN=LOC101503936 PE=4 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 2.779e-100
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
Query:    1 MSTDLHIHHQLPKLRISSADQIPDHVHAMSSTVIAPPEIKIKSEIQIQIEIEKEDENESQSESEAVVGAVVADGENEESYRTPTSKESKIPEIMTCPPAPKKPKPFVSCKRKLMDEFQFFEVSNNEDMDAFFRSTFPKRTCPCT 144
            MSTDLHIHHQLPKLRISSADQIPDHVHAMSSTVIAPPEIKIKSEIQIQIEIEKEDENESQSESEAVVGAVVADGENEESYRTPTSKESKIPEIMTCPPAPKKPKPFVSCKRKLMDEFQFFEVSNNEDMDAFFRSTFPKRTCPCT
Sbjct:    1 MSTDLHIHHQLPKLRISSADQIPDHVHAMSSTVIAPPEIKIKSEIQIQIEIEKEDENESQSESEAVVGAVVADGENEESYRTPTSKESKIPEIMTCPPAPKKPKPFVSCKRKLMDEFQFFEVSNNEDMDAFFRSTFPKRTCPCT 144          
BLAST of rna-XM_004496092.3 vs. UniProtKB/TrEMBL
Match: tr|A0A392NKZ1|A0A392NKZ1_9FABA (Cyclin-dependent protein kinase inhibitor SIM-like (Fragment) OS=Trifolium medium OX=97028 PE=4 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 6.961e-54
Identity = 94/149 (63.09%), Postives = 110/149 (73.83%), Query Frame = 0
Query:    1 MSTDLHIHH-QLPKLRISSA--DQIPDHVHAMSSTVIAPPEIKIKSEIQIQIEIEKEDENESQSESEAVVGAVVADG--ENEESYRTPTSKESKIPEIMTCPPAPKKPKPFVSCKRKLMDEFQFFEVSNNEDMDAFFRSTFPKRTCPCT 144
            MSTDLH+HH QLPKLRI++   D   + V   SS  I P ++ +   +     I + DE   Q+E++A     V DG  EN++SYRTPTSKESKIPEI  CPPAP+KPKPFVSCKRKLMDEFQFFEVSNNED+DAFFRSTFPKRTCPCT
Sbjct:    6 MSTDLHLHHHQLPKLRITAVKLDDDVEEVTTPSSDQIIPDDVVVADTMSSSTAITQPDE-IIQNENDATDDGTVVDGVNENDQSYRTPTSKESKIPEIQDCPPAPRKPKPFVSCKRKLMDEFQFFEVSNNEDIDAFFRSTFPKRTCPCT 153          
BLAST of rna-XM_004496092.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6LM98|A0A2Z6LM98_TRISU (Cyclin-dependent protein kinase inhibitor SMR3 OS=Trifolium subterraneum OX=3900 GN=TSUD_37600 PE=4 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 8.796e-54
Identity = 94/151 (62.25%), Postives = 110/151 (72.85%), Query Frame = 0
Query:    1 MSTDLHIH-HQLPKLRISSADQIPDHVHAM----SSTVIAPPEIKIKSEIQIQIEIEKEDENESQSESEAVVGAVVADGEN--EESYRTPTSKESKIPEIMTCPPAPKKPKPFVSCKRKLMDEFQFFEVSNNEDMDAFFRSTFPKRTCPCT 144
            MSTDLH+H HQLPKLRI++ + + D         S  +I P ++ +   +     I + DE   Q+E++A     V DGEN  +ESYRTPTSKESKIPEI  CPPAP+KPKPFVSCKRKLMDEFQFFEVSNNEDMDAFFRSTFPKRTCPCT
Sbjct:    1 MSTDLHLHNHQLPKLRITAVN-LDDKEQVTTPNSSDQIIIPHDVVVPDTMSSSATITQPDET-IQNENDATDDGTVVDGENQTDESYRTPTSKESKIPEIQDCPPAPRKPKPFVSCKRKLMDEFQFFEVSNNEDMDAFFRSTFPKRTCPCT 149          
BLAST of rna-XM_004496092.3 vs. UniProtKB/TrEMBL
Match: tr|B7FH61|B7FH61_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=25484850 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 6.812e-52
Identity = 97/159 (61.01%), Postives = 104/159 (65.41%), Query Frame = 0
Query:    1 MSTDLHIHHQLPKLRISSA---------------DQIPDHVHAMSSTVIAPPEIKIKSEIQIQIEIEKEDENESQSESEAVVGAVVADGENEESYRTPTSKESKIPEIMTCPPAPKKPKPFVSCKRKLMDEFQFFEVSNNEDMDAFFRSTFPKRTCPCT 144
            MSTDLH+  QLP LRIS+A               DQ+PD    MSS+ I  PEI                      E E V GAVV DGE +ESYRTPTSKESKIPEI  CPPAP+KPKPFVSCKRKLMD+FQFFEV NNEDMDAFFRSTFPKRTCPCT
Sbjct:    1 MSTDLHLQ-QLPTLRISAAVDNLDDDDDVVTPSSDQVPDVADTMSSSAIIEPEI----------------------EKENVDGAVV-DGEIDESYRTPTSKESKIPEIHDCPPAPRKPKPFVSCKRKLMDDFQFFEVKNNEDMDAFFRSTFPKRTCPCT 135          
BLAST of rna-XM_004496092.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3MA63|A0A2K3MA63_TRIPR (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g043778 PE=4 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.450e-50
Identity = 95/188 (50.53%), Postives = 117/188 (62.23%), Query Frame = 0
Query:    1 MSTDLHIHH-QLPKLRISSADQIPDHVHAM----SSTVIAP--PEIKIKSEIQIQIEIEKE--------------------------------DE---NESQSESEAVVGAVVADG--ENEESYRTPTSKESKIPEIMTCPPAPKKPKPFVSCKRKLMDEFQFFEVSNNEDMDAFFRSTFPKRTCPCT 144
            MSTDLH+HH QLPKLRI++  ++ D V  +    S  +I P  P+++I + +++   +E++                                DE   NE+ +   A     V DG  EN++SYRTPTSKESKIPEI  CPPAP+KPKPFVSCKRKLMDE QFFEVSNNEDMDAFFRSTFPKRTCPCT
Sbjct:    1 MSTDLHLHHHQLPKLRINAVVKLDDDVEEVTTPSSDQIIIPDXPKLRINAVVKLDDNVEEDVVTTPSSDQIIIPDDVVAIADTMSSSTAITQPDEIIQNENDATVTATDDGTVVDGVNENDQSYRTPTSKESKIPEIQDCPPAPRKPKPFVSCKRKLMDELQFFEVSNNEDMDAFFRSTFPKRTCPCT 188          
BLAST of rna-XM_004496092.3 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8MI08|A0A8B8MI08_ABRPR (Cyclin-dependent protein kinase inhibitor SMR1 OS=Abrus precatorius OX=3816 GN=LOC113873392 PE=4 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 5.532e-49
Identity = 85/146 (58.22%), Postives = 102/146 (69.86%), Query Frame = 0
Query:    1 MSTDLHIHHQLPKLRISSA--DQIPDHVHAMSSTVIAPPEIKIKSEIQIQIEIEKEDENESQSESEAVVGAVVADGENEESYRTPTSKESKIPEIMTCPPAPKKPKPFVSCKRKLMDEFQFFEVSNNEDMDAFFRSTFPKRTCPCT 144
            MSTDLH+HH+LPKLRI++   D +P   H +SS V                    E+EN+         GAV    ++EESYRTPTSKESKIP ++TCPPAP+KPKPFVSCKRKL+DEFQFFEV++ EDMDAFFRSTFPKR+CPCT
Sbjct:    1 MSTDLHLHHELPKLRIAAVKIDDVPSPDHDISSVVT-----------------RAENEND---------GAVTV-ADDEESYRTPTSKESKIPAVLTCPPAPRKPKPFVSCKRKLLDEFQFFEVTSKEDMDAFFRSTFPKRSCPCT 119          
BLAST of rna-XM_004496092.3 vs. UniProtKB/TrEMBL
Match: tr|A0A151T0T2|A0A151T0T2_CAJCA (Cyclin-dependent protein kinase inhibitor SMR1 OS=Cajanus cajan OX=3821 GN=KK1_023070 PE=4 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 2.896e-45
Identity = 86/147 (58.50%), Postives = 100/147 (68.03%), Query Frame = 0
Query:    1 MSTDLHIHHQLPKLRISSA---DQIPDHVHAMSSTVIAPPEIKIKSEIQIQIEIEKEDENESQSESEAVVGAVVADGENEESYRTPTSKESKIPEIMTCPPAPKKPKPFVSCKRKLMDEFQFFEVSNNEDMDAFFRSTFPKRTCPCT 144
            MSTDLH+HH+LPKLRI++    D        +SS V  PPE                D+N   + + A   +  A  E +ESYRTPTSKES+IP IMTCPPAPKK KPF+SCKRKL+DEFQFFEVS NEDMDAFFRSTFPKR+CPCT
Sbjct:    1 MSTDLHLHHELPKLRIAAVKLEDAPSSPRREVSSVVDTPPE----------------DQNHVAAGATAGAASATAGTEEDESYRTPTSKESRIPAIMTCPPAPKKAKPFISCKRKLLDEFQFFEVS-NEDMDAFFRSTFPKRSCPCT 130          
BLAST of rna-XM_004496092.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SP19|A0A0S3SP19_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G121200 PE=4 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.284e-43
Identity = 79/148 (53.38%), Postives = 99/148 (66.89%), Query Frame = 0
Query:    1 MSTDLHIHHQLPKLRISSA--DQIPD--HVHAMSSTVIAPPEIKIKSEIQIQIEIEKEDENESQSESEAVVGAVVADGENEESYRTPTSKESKIPEIMTCPPAPKKPKPFVSCKRKLMDEFQFFEVSNNEDMDAFFRSTFPKRTCPCT 144
            MSTD H+HH LPKLRI++   D +P   H+ A+ S+ +       +++ Q Q E            ++A   A     E +ESYRTPTSKESKIP IM+CPPAP+KPK F SCKRKL D+FQFF+V+N EDMDAFFRSTFPKR+C CT
Sbjct:    1 MSTDFHLHHDLPKLRIAAVKIDDVPSDHHLDALVSSSVV-----TRADNQTQQEETVAVAVTVTVPADAPTVA-----EEDESYRTPTSKESKIPAIMSCPPAPRKPKAFASCKRKLFDDFQFFDVTNKEDMDAFFRSTFPKRSCTCT 138          
BLAST of rna-XM_004496092.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TDW6|A0A0L9TDW6_PHAAN (Cyclin-dependent protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0190630 PE=4 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.284e-43
Identity = 79/148 (53.38%), Postives = 99/148 (66.89%), Query Frame = 0
Query:    1 MSTDLHIHHQLPKLRISSA--DQIPD--HVHAMSSTVIAPPEIKIKSEIQIQIEIEKEDENESQSESEAVVGAVVADGENEESYRTPTSKESKIPEIMTCPPAPKKPKPFVSCKRKLMDEFQFFEVSNNEDMDAFFRSTFPKRTCPCT 144
            MSTD H+HH LPKLRI++   D +P   H+ A+ S+ +       +++ Q Q E            ++A   A     E +ESYRTPTSKESKIP IM+CPPAP+KPK F SCKRKL D+FQFF+V+N EDMDAFFRSTFPKR+C CT
Sbjct:    1 MSTDFHLHHDLPKLRIAAVKIDDVPSDHHLDALVSSSVV-----TRADNQTQQEETVAVAVTVTVPADAPTVA-----EEDESYRTPTSKESKIPAIMSCPPAPRKPKAFASCKRKLFDDFQFFDVTNKEDMDAFFRSTFPKRSCTCT 138          
BLAST of rna-XM_004496092.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3V2L0|A0A1S3V2L0_VIGRR (Uncharacterized protein LOC106771176 OS=Vigna radiata var. radiata OX=3916 GN=LOC106771176 PE=4 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.952e-42
Identity = 78/148 (52.70%), Postives = 98/148 (66.22%), Query Frame = 0
Query:    1 MSTDLHIHHQLPKLRISSA--DQIPD--HVHAMSSTVIAPPEIKIKSEIQIQIEIEKEDENESQSESEAVVGAVVADGENEESYRTPTSKESKIPEIMTCPPAPKKPKPFVSCKRKLMDEFQFFEVSNNEDMDAFFRSTFPKRTCPCT 144
            MSTD H+HH LPKLRI++   D +P   H+ A+ S+      +  +++ Q   E            ++A   A     E +ESYRTPTSKESKIP IM+CPPAP+KPK F SCKRKL D+FQFF+V+N EDMDAFFRSTFPKR+C CT
Sbjct:    1 MSTDFHLHHDLPKLRIAAVKIDDVPSDHHLDALVSS-----SVLTRADNQTLEEETVTVAVTVTVPADAPTVA-----EEDESYRTPTSKESKIPAIMSCPPAPRKPKAFASCKRKLFDDFQFFDVTNKEDMDAFFRSTFPKRSCTCT 138          
The following BLAST results are available for this feature:
BLAST of rna-XM_004496092.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11)
Total hits: 1
Match NameE-valueIdentityDescription
|1.273e-752.78Symbols: SMR6 | | chr5:16202465-16202803 FORWARD ... [more]
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BLAST of rna-XM_004496092.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of rna-XM_004496092.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2XXP8|A0A1S2XXP8_CICAR2.779e-100100.00Cyclin-dependent protein kinase inhibitor SMR2 OS=... [more]
tr|A0A392NKZ1|A0A392NKZ1_9FABA6.961e-5463.09Cyclin-dependent protein kinase inhibitor SIM-like... [more]
tr|A0A2Z6LM98|A0A2Z6LM98_TRISU8.796e-5462.25Cyclin-dependent protein kinase inhibitor SMR3 OS=... [more]
tr|B7FH61|B7FH61_MEDTR6.812e-5261.01Uncharacterized protein OS=Medicago truncatula OX=... [more]
tr|A0A2K3MA63|A0A2K3MA63_TRIPR3.450e-5050.53Uncharacterized protein OS=Trifolium pratense OX=5... [more]
tr|A0A8B8MI08|A0A8B8MI08_ABRPR5.532e-4958.22Cyclin-dependent protein kinase inhibitor SMR1 OS=... [more]
tr|A0A151T0T2|A0A151T0T2_CAJCA2.896e-4558.50Cyclin-dependent protein kinase inhibitor SMR1 OS=... [more]
tr|A0A0S3SP19|A0A0S3SP19_PHAAN1.284e-4353.38Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A0L9TDW6|A0A0L9TDW6_PHAAN1.284e-4353.38Cyclin-dependent protein OS=Phaseolus angularis OX... [more]
tr|A0A1S3V2L0|A0A1S3V2L0_VIGRR1.952e-4252.70Uncharacterized protein LOC106771176 OS=Vigna radi... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040389Cyclin-dependent protein kinase inhibitor SMRPANTHERPTHR33142CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13coord: 40..137

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_004496092.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496092.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496092.3; organism=Cicer arietinum; type=mRNA; length=435bp
ATGTCCACCGATCTCCACATCCACCACCAACTACCTAAGCTCCGAATCTC
ATCCGCCGATCAAATTCCCGACCACGTCCACGCCATGTCGTCAACCGTAA
TCGCACCACCTGAAATCAAAATCAAAAGCGAAATTCAAATTCAAATTGAA
ATTGAAAAAGAAGACGAAAACGAAAGCCAAAGCGAAAGCGAAGCTGTTGT
CGGTGCTGTCGTCGCCGATGGAGAAAACGAAGAGAGTTACCGGACTCCGA
CTTCAAAGGAAAGCAAGATACCGGAGATCATGACGTGTCCACCGGCGCCG
AAAAAACCGAAGCCGTTCGTTTCGTGCAAAAGGAAGCTTATGGATGAATT
TCAATTCTTCGAGGTATCAAATAATGAAGACATGGATGCGTTTTTCAGAT
CCACTTTTCCAAAGAGGACTTGTCCTTGTACATGA
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protein sequence of rna-XM_004496092.3_CaCDCfrontier-NCBI_v1

>rna-XM_004496092.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496092.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496092.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=144bp
MSTDLHIHHQLPKLRISSADQIPDHVHAMSSTVIAPPEIKIKSEIQIQIE
IEKEDENESQSESEAVVGAVVADGENEESYRTPTSKESKIPEIMTCPPAP
KKPKPFVSCKRKLMDEFQFFEVSNNEDMDAFFRSTFPKRTCPCT
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mRNA from alignment at chr4:8892550..8893396-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_004496092.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496092.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496092.3; organism=Cicer arietinum; type=mRNA; length=847bp; location=Sequence derived from: chr4:8892550..8893396- (Cicer arietinum
CAACCCAACCATCAAGTAGTATATATACACAATAATAAAACGCAGTTTCA CGCACTTCATCATCACGTTAAGTAATTTTCATTTCTCACCATCCAAACAC CCCCTTCCTTCACGGGCCATGTCCACCGATCTCCACATCCACCACCAACT ACCTAAGCTCCGAATCTCATCCGCCGATCAAATTCCCGACCACGTCCACG CCATGTCGTCAACCGTAATCGCACCACCTGAAATCAAAATCAAAAGCGAA ATTCAAATTCAAATTGAAATTGAAAAAGAAGACGAAAACGAAAGCCAAAG CGAAAGCGAAGCTGTTGTCGGTGCTGTCGTCGCCGATGGAGAAAACGAAG AGAGTTACCGGACTCCGACTTCAAAGGAAAGCAAGATACCGGAGATCATG ACGTGTCCACCGGCGCCGAAAAAACCGAAGCCGTTCGTTTCGTGCAAAAG GAAGCTTATGGATGAATTTCAATTCTTCGAGGTATCAAATAATGAAGACA TGGATGCGTTTTTCAGATCCACTTTTCCAAAGAGGACTTGTCCTTGTACA TGAAAATTTCAACCTCTCTCAAATTTCTTCGATTCACTACCTTAGTGCTC GTTGATTAAAATTAAACTACGTAAATTAATTAATTACACGATTTTTGTTT TACTTTTATCCAATTCCCTCTTCTTTCATCTCAATTTCTTTCTTCTTTTT TTGTTTTTTCATATGTTAATTATTATAAGATATGTGAAATATTGGATCTG AATCGTATATGTGAATTAATGGAATCGATATCAACATAGTGTCGAATTCT CTCCATATACTCAATTTTCGTTTATTTATTTAATTATTAATTATTAA
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Coding sequence (CDS) from alignment at chr4:8892550..8893396-

>rna-XM_004496092.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496092.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496092.3; organism=Cicer arietinum; type=CDS; length=435bp; location=Sequence derived from: chr4:8892550..8893396- (Cicer arietinum
ATGTCCACCGATCTCCACATCCACCACCAACTACCTAAGCTCCGAATCTC
ATCCGCCGATCAAATTCCCGACCACGTCCACGCCATGTCGTCAACCGTAA
TCGCACCACCTGAAATCAAAATCAAAAGCGAAATTCAAATTCAAATTGAA
ATTGAAAAAGAAGACGAAAACGAAAGCCAAAGCGAAAGCGAAGCTGTTGT
CGGTGCTGTCGTCGCCGATGGAGAAAACGAAGAGAGTTACCGGACTCCGA
CTTCAAAGGAAAGCAAGATACCGGAGATCATGACGTGTCCACCGGCGCCG
AAAAAACCGAAGCCGTTCGTTTCGTGCAAAAGGAAGCTTATGGATGAATT
TCAATTCTTCGAGGTATCAAATAATGAAGACATGGATGCGTTTTTCAGAT
CCACTTTTCCAAAGAGGACTTGTCCTTGTACATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR040389SMR
Vocabulary: Biological Process
TermDefinition
GO:0032875regulation of DNA endoreduplication