rna-XM_004496932.3
Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_004496932.3 vs. Araport11
Match: | (Symbols: FLA20 | putative fasciclin-like arabinogalactan protein 20 | chr5:16406656-16407930 REVERSE LENGTH=424) HSP 1 Score: 203.371 bits (516), Expect = 1.336e-61 Identity = 130/348 (37.36%), Postives = 188/348 (54.02%), Query Frame = 0 Query: 1 MASFLILVSSLFIFFFFSFSF-ALPREAIFDAADVLSDSGFVSMSLTLEIVAETL-LEQSPSATVFAPSDSAFKKSGQPSLDLLRFHFVMLPLPPQSFRRLPSGAKLPTMLTGQSLTVTTSPS-DQSTSLNNIKIIGSPIYDDGFLLVYGIDRFFD---------------------------PSFQYNGPNPKPNSNSNLNSSCTATNRTMNSSDSFDQVIGTLKSSGYSAMASFLGMQLSGDIDQN--GITVFAPADEMVINRIGDFEDYPSFFRRHVVPCKFLWNDLVDFV-DGSELPTFLEGFTINITRSGGVLVLNGVPVFFPDIFFNDRVVVHGVSDVLAVQ 315 MAS L L + IFF A ++ A +VLSDSG++SM LTL++ + L LE T+FAPSD +F K GQPSL +++ LP ++ R LP+GAK+PT+ + SLTVT S TS+NN+ + SP++DDG++++YG D FF PS P P PN S+ + ++ +N + F+ L S G+ +A+FL +QL + N ITVFAP DE + N F DY + FR HVV LW DL F +GS L T L+G+ I I+ SG +L+LNGVP+ +PD++ ND + VHG + ++ + Sbjct: 42 MASKL-LTTFFLIFFVLDIDLVATSMTSVSSAVEVLSDSGYLSMGLTLKLANQDLNLEDWQELTLFAPSDQSFSKFGQPSLLDMKYQLSPTRLPGETLRNLPNGAKIPTLRSNYSLTVTNSSRFGGKTSINNVVVQDSPVFDDGYVVIYGSDEFFTSPTKISDDSSSSSSIPSTTSSTGSIPIPSSATQTP-PSPNIASDSTRNLPNRSKPVNRFNIFESASRLLMSRGFVIIATFLALQLEDNTSGNDTKITVFAPIDEAIPNPTTKFSDYVTIFRGHVVSQLLLWKDLQKFAKEGSILQTVLKGYEIEISLSGDILLLNGVPLIYPDLYVNDWIAVHGFNQMIVTK 387
BLAST of rna-XM_004496932.3 vs. Araport11
Match: | (Symbols: FLA21 | FASCICLIN-like arabinogalactan protein 21 precursor | chr5:2142858-2143919 FORWARD LENGTH=353) HSP 1 Score: 82.4185 bits (202), Expect = 2.499e-17 Identity = 77/310 (24.84%), Postives = 148/310 (47.74%), Query Frame = 0 Query: 30 DAADVLSDSGFVSMSLTLEIVAETLLEQSPSATVFAPSDSAF--KKSGQPSL--DLLRFHFVMLPLPPQSFRRLPSGAKLPTMLTGQSLTVTTSPSDQSTS-LNNIKIIGSPIYDDGFLLVYGIDRFFDPSFQYNGPNPKPNSNSNLNSS-CTA--TNRTMNSSD-----SFDQVIGTLKSSGYSAMASFLGMQLSGDI-DQN------GITVFAPADEMVINRIGDFEDYPSFFRRHVVPCKFLWNDLVDFVDGSELPTF--LEGFTI---NITRSGGVLVLNGVPVFFPDIFFNDRVVVHGVSDVLAV 314 +A++ L S F +++ L I E L SP+ T+FA D++F S P LL +H + L L + P G LPT+L +S+ ++T + T+ +N+++I ++ L+++G+ F P +P+S+ +++ C + TN+T N+ + + +++ L S+G+ A L L+ + D N G+T+ A + + ++ F R H++ + + D D + + T + TI N+ SGG +++GV + PD+F + V+HG+S L + Sbjct: 51 NASNTLRQSNFKAIATLLHISPEIFLSSSPNTTLFAIEDASFFNTSSLHPLFLKQLLHYHTLPLMLSMDDLLKKPQGTCLPTLLHHKSVQISTVNQESRTAEVNHVRITHPDMFLGDSLVIHGVIGPFSPL--------QPHSDHLIHTPLCQSDTTNKTSNNEEVPVSIDWTRIVQLLSSNGFVPFAIGLHSVLNRIVNDHNHHKNLTGVTILATPNLVSLSSASPF--LYEVVRHHILVQRLTYKDFASMSDKATVKTLDPYQDLTITRRNVNSSGGDFMISGVEIVDPDMFSSSNFVIHGISHTLEI 350
BLAST of rna-XM_004496932.3 vs. Araport11
Match: | (Symbols: FLA19 | Fasciclin-like arabinogalactan protein 19 | chr1:5227275-5228021 FORWARD LENGTH=248) HSP 1 Score: 53.1434 bits (126), Expect = 7.332e-8 Identity = 40/172 (23.26%), Postives = 78/172 (45.35%), Query Frame = 0 Query: 175 CTATNRTMNSSDSFDQVIGTLKSSGYSAMASFLGMQLSGDI-----DQNGITVFAPADEMV--INRIGDFEDYPSFFRRHVVPCKFLWNDLVDFVDGSELPTFLEGFTINITR---SGGVLVLNGVPVFFPDIFFNDRVVVHGVSDVLAV-------QVQDDTSAVVDTDFF 329 C T + ++ I L+ G + A+ + ++ D+ +T+FAP D M+ ++ Y S R H VP + + L + S LPT L + +T+ S + L+GV + P +F + VHG++D+L + ++ +D++A+ + +F Sbjct: 22 CLPHPSTGVPLEELERAIAILRVRGRALFANAI---ITSDLLFDLLSDESLTLFAPTDSMLFDLDMTHSLPFYVSTLRLHSVPLRLSLSGLRSLPNSSSLPTLLPSHRLLLTKHSSSNDSIFLDGVQLLIPGLFDGQHIAVHGLADLLPLTAPSSPNRLVEDSTALAKSPWF 190
BLAST of rna-XM_004496932.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FGW0|FLA20_ARATH (Putative fasciclin-like arabinogalactan protein 20 OS=Arabidopsis thaliana OX=3702 GN=FLA20 PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.286e-60 Identity = 130/348 (37.36%), Postives = 188/348 (54.02%), Query Frame = 0 Query: 1 MASFLILVSSLFIFFFFSFSF-ALPREAIFDAADVLSDSGFVSMSLTLEIVAETL-LEQSPSATVFAPSDSAFKKSGQPSLDLLRFHFVMLPLPPQSFRRLPSGAKLPTMLTGQSLTVTTSPS-DQSTSLNNIKIIGSPIYDDGFLLVYGIDRFFD---------------------------PSFQYNGPNPKPNSNSNLNSSCTATNRTMNSSDSFDQVIGTLKSSGYSAMASFLGMQLSGDIDQN--GITVFAPADEMVINRIGDFEDYPSFFRRHVVPCKFLWNDLVDFV-DGSELPTFLEGFTINITRSGGVLVLNGVPVFFPDIFFNDRVVVHGVSDVLAVQ 315 MAS L L + IFF A ++ A +VLSDSG++SM LTL++ + L LE T+FAPSD +F K GQPSL +++ LP ++ R LP+GAK+PT+ + SLTVT S TS+NN+ + SP++DDG++++YG D FF PS P P PN S+ + ++ +N + F+ L S G+ +A+FL +QL + N ITVFAP DE + N F DY + FR HVV LW DL F +GS L T L+G+ I I+ SG +L+LNGVP+ +PD++ ND + VHG + ++ + Sbjct: 42 MASKL-LTTFFLIFFVLDIDLVATSMTSVSSAVEVLSDSGYLSMGLTLKLANQDLNLEDWQELTLFAPSDQSFSKFGQPSLLDMKYQLSPTRLPGETLRNLPNGAKIPTLRSNYSLTVTNSSRFGGKTSINNVVVQDSPVFDDGYVVIYGSDEFFTSPTKISDDSSSSSSIPSTTSSTGSIPIPSSATQTP-PSPNIASDSTRNLPNRSKPVNRFNIFESASRLLMSRGFVIIATFLALQLEDNTSGNDTKITVFAPIDEAIPNPTTKFSDYVTIFRGHVVSQLLLWKDLQKFAKEGSILQTVLKGYEIEISLSGDILLLNGVPLIYPDLYVNDWIAVHGFNQMIVTK 387
BLAST of rna-XM_004496932.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FL53|FLA21_ARATH (Fasciclin-like arabinogalactan protein 21 OS=Arabidopsis thaliana OX=3702 GN=FLA21 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.444e-16 Identity = 77/310 (24.84%), Postives = 148/310 (47.74%), Query Frame = 0 Query: 30 DAADVLSDSGFVSMSLTLEIVAETLLEQSPSATVFAPSDSAF--KKSGQPSL--DLLRFHFVMLPLPPQSFRRLPSGAKLPTMLTGQSLTVTTSPSDQSTS-LNNIKIIGSPIYDDGFLLVYGIDRFFDPSFQYNGPNPKPNSNSNLNSS-CTA--TNRTMNSSD-----SFDQVIGTLKSSGYSAMASFLGMQLSGDI-DQN------GITVFAPADEMVINRIGDFEDYPSFFRRHVVPCKFLWNDLVDFVDGSELPTF--LEGFTI---NITRSGGVLVLNGVPVFFPDIFFNDRVVVHGVSDVLAV 314 +A++ L S F +++ L I E L SP+ T+FA D++F S P LL +H + L L + P G LPT+L +S+ ++T + T+ +N+++I ++ L+++G+ F P +P+S+ +++ C + TN+T N+ + + +++ L S+G+ A L L+ + D N G+T+ A + + ++ F R H++ + + D D + + T + TI N+ SGG +++GV + PD+F + V+HG+S L + Sbjct: 51 NASNTLRQSNFKAIATLLHISPEIFLSSSPNTTLFAIEDASFFNTSSLHPLFLKQLLHYHTLPLMLSMDDLLKKPQGTCLPTLLHHKSVQISTVNQESRTAEVNHVRITHPDMFLGDSLVIHGVIGPFSPL--------QPHSDHLIHTPLCQSDTTNKTSNNEEVPVSIDWTRIVQLLSSNGFVPFAIGLHSVLNRIVNDHNHHKNLTGVTILATPNLVSLSSASPF--LYEVVRHHILVQRLTYKDFASMSDKATVKTLDPYQDLTITRRNVNSSGGDFMISGVEIVDPDMFSSSNFVIHGISHTLEI 350
BLAST of rna-XM_004496932.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q5Q0H2|FLA19_ARATH (Fasciclin-like arabinogalactan protein 19 OS=Arabidopsis thaliana OX=3702 GN=FLA19 PE=2 SV=2) HSP 1 Score: 53.1434 bits (126), Expect = 7.172e-7 Identity = 40/172 (23.26%), Postives = 78/172 (45.35%), Query Frame = 0 Query: 175 CTATNRTMNSSDSFDQVIGTLKSSGYSAMASFLGMQLSGDI-----DQNGITVFAPADEMV--INRIGDFEDYPSFFRRHVVPCKFLWNDLVDFVDGSELPTFLEGFTINITR---SGGVLVLNGVPVFFPDIFFNDRVVVHGVSDVLAV-------QVQDDTSAVVDTDFF 329 C T + ++ I L+ G + A+ + ++ D+ +T+FAP D M+ ++ Y S R H VP + + L + S LPT L + +T+ S + L+GV + P +F + VHG++D+L + ++ +D++A+ + +F Sbjct: 22 CLPHPSTGVPLEELERAIAILRVRGRALFANAI---ITSDLLFDLLSDESLTLFAPTDSMLFDLDMTHSLPFYVSTLRLHSVPLRLSLSGLRSLPNSSSLPTLLPSHRLLLTKHSSSNDSIFLDGVQLLIPGLFDGQHIAVHGLADLLPLTAPSSPNRLVEDSTALAKSPWF 190
BLAST of rna-XM_004496932.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XZN0|A0A1S2XZN0_CICAR (Fasciclin-like arabinogalactan protein 20 OS=Cicer arietinum OX=3827 GN=LOC101495976 PE=3 SV=1) HSP 1 Score: 678.707 bits (1750), Expect = 0.000e+0 Identity = 342/342 (100.00%), Postives = 342/342 (100.00%), Query Frame = 0 Query: 1 MASFLILVSSLFIFFFFSFSFALPREAIFDAADVLSDSGFVSMSLTLEIVAETLLEQSPSATVFAPSDSAFKKSGQPSLDLLRFHFVMLPLPPQSFRRLPSGAKLPTMLTGQSLTVTTSPSDQSTSLNNIKIIGSPIYDDGFLLVYGIDRFFDPSFQYNGPNPKPNSNSNLNSSCTATNRTMNSSDSFDQVIGTLKSSGYSAMASFLGMQLSGDIDQNGITVFAPADEMVINRIGDFEDYPSFFRRHVVPCKFLWNDLVDFVDGSELPTFLEGFTINITRSGGVLVLNGVPVFFPDIFFNDRVVVHGVSDVLAVQVQDDTSAVVDTDFFSDDDQNVFDPGEF 342 MASFLILVSSLFIFFFFSFSFALPREAIFDAADVLSDSGFVSMSLTLEIVAETLLEQSPSATVFAPSDSAFKKSGQPSLDLLRFHFVMLPLPPQSFRRLPSGAKLPTMLTGQSLTVTTSPSDQSTSLNNIKIIGSPIYDDGFLLVYGIDRFFDPSFQYNGPNPKPNSNSNLNSSCTATNRTMNSSDSFDQVIGTLKSSGYSAMASFLGMQLSGDIDQNGITVFAPADEMVINRIGDFEDYPSFFRRHVVPCKFLWNDLVDFVDGSELPTFLEGFTINITRSGGVLVLNGVPVFFPDIFFNDRVVVHGVSDVLAVQVQDDTSAVVDTDFFSDDDQNVFDPGEF Sbjct: 1 MASFLILVSSLFIFFFFSFSFALPREAIFDAADVLSDSGFVSMSLTLEIVAETLLEQSPSATVFAPSDSAFKKSGQPSLDLLRFHFVMLPLPPQSFRRLPSGAKLPTMLTGQSLTVTTSPSDQSTSLNNIKIIGSPIYDDGFLLVYGIDRFFDPSFQYNGPNPKPNSNSNLNSSCTATNRTMNSSDSFDQVIGTLKSSGYSAMASFLGMQLSGDIDQNGITVFAPADEMVINRIGDFEDYPSFFRRHVVPCKFLWNDLVDFVDGSELPTFLEGFTINITRSGGVLVLNGVPVFFPDIFFNDRVVVHGVSDVLAVQVQDDTSAVVDTDFFSDDDQNVFDPGEF 342
BLAST of rna-XM_004496932.3 vs. UniProtKB/TrEMBL
Match: tr|G7IAT5|G7IAT5_MEDTR (Fasciclin-like arabinogalactan protein OS=Medicago truncatula OX=3880 GN=11423835 PE=3 SV=1) HSP 1 Score: 542.732 bits (1397), Expect = 0.000e+0 Identity = 280/342 (81.87%), Postives = 304/342 (88.89%), Query Frame = 0 Query: 1 MASFLILVSSLFIFFFFSFSFALPREAIFDAADVLSDSGFVSMSLTLEIVAETLLEQSPSATVFAPSDSAFKKSGQPSLDLLRFHFVMLPLPPQSFRRLPSGAKLPTMLTGQSLTVTTSPSDQSTSLNNIKIIGSPIYDDGFLLVYGIDRFFDPSFQYNGPNPKPNSNSNLNSSCTATNRTMNSSDSFDQVIGTLKSSGYSAMASFLGMQLSGDIDQNGITVFAPADEMVINRIGDFEDYPSFFRRHVVPCKFLWNDLVDFVDGSELPTFLEGFTINITRSGGVLVLNGVPVFFPDIFFNDRVVVHGVSDVLAVQVQDDTSAVVDTDFFSDDDQNVFDPGEF 342 MAS L L SS IFFF ALPRE IFDAAD+L DSGFVSMSLTLEIVAE+LLEQS SATVFAPSDSAFKKSGQPSLDLLRFHFVMLPLP QS RRLP+GAKLPTMLTGQSLTVTTS SD+ TS+NNIKI G+PIYDDG LLVYGIDRFFDP+FQY GP+ KPNS SN SSC+A NRT+NSS SF+Q + TLK+SGYS MASFLGMQLSG+I+QNGITVFAP DEMV+NRIGDFEDYPSFFRRHVVPCKFLWNDLVDF DG++LPTFLEGF+INITRSGGVL+LNGVPVFFPD+FFNDR+VVHGV+DVLA VQDDTSAVVD SD DQN+FDPGEF Sbjct: 1 MASSLFLASSFIIFFFSFSVTALPRETIFDAADILLDSGFVSMSLTLEIVAESLLEQSHSATVFAPSDSAFKKSGQPSLDLLRFHFVMLPLPQQSLRRLPAGAKLPTMLTGQSLTVTTSFSDRVTSVNNIKINGTPIYDDGVLLVYGIDRFFDPNFQYTGPSRKPNSYSN--SSCSALNRTVNSSGSFEQAVKTLKTSGYSVMASFLGMQLSGNINQNGITVFAPTDEMVMNRIGDFEDYPSFFRRHVVPCKFLWNDLVDFGDGTQLPTFLEGFSINITRSGGVLILNGVPVFFPDVFFNDRLVVHGVTDVLANAVQDDTSAVVDPAVSSDGDQNLFDPGEF 340
BLAST of rna-XM_004496932.3 vs. UniProtKB/TrEMBL
Match: tr|A0A396JVW1|A0A396JVW1_MEDTR (Putative FAS1 domain-containing protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr1g0208541 PE=3 SV=1) HSP 1 Score: 534.643 bits (1376), Expect = 0.000e+0 Identity = 277/339 (81.71%), Postives = 301/339 (88.79%), Query Frame = 0 Query: 1 MASFLILVSSLFIFFFFSFSFALPREAIFDAADVLSDSGFVSMSLTLEIVAETLLEQSPSATVFAPSDSAFKKSGQPSLDLLRFHFVMLPLPPQSFRRLPSGAKLPTMLTGQSLTVTTSPSDQSTSLNNIKIIGSPIYDDGFLLVYGIDRFFDPSFQYNGPNPKPNSNSNLNSSCTATNRTMNSSDSFDQVIGTLKSSGYSAMASFLGMQLSGDIDQNGITVFAPADEMVINRIGDFEDYPSFFRRHVVPCKFLWNDLVDFVDGSELPTFLEGFTINITRSGGVLVLNGVPVFFPDIFFNDRVVVHGVSDVLAVQVQDDTSAVVDTDFFSDDDQNVFDP 339 MAS L L SS IFFF ALPRE IFDAAD+L DSGFVSMSLTLEIVAE+LLEQS SATVFAPSDSAFKKSGQPSLDLLRFHFVMLPLP QS RRLP+GAKLPTMLTGQSLTVTTS SD+ TS+NNIKI G+PIYDDG LLVYGIDRFFDP+FQY GP+ KPNS SN SSC+A NRT+NSS SF+Q + TLK+SGYS MASFLGMQLSG+I+QNGITVFAP DEMV+NRIGDFEDYPSFFRRHVVPCKFLWNDLVDF DG++LPTFLEGF+INITRSGGVL+LNGVPVFFPD+FFNDR+VVHGV+DVLA VQDDTSAVVD SD DQN+FDP Sbjct: 1 MASSLFLASSFIIFFFSFSVTALPRETIFDAADILLDSGFVSMSLTLEIVAESLLEQSHSATVFAPSDSAFKKSGQPSLDLLRFHFVMLPLPQQSLRRLPAGAKLPTMLTGQSLTVTTSFSDRVTSVNNIKINGTPIYDDGVLLVYGIDRFFDPNFQYTGPSRKPNSYSN--SSCSALNRTVNSSGSFEQAVKTLKTSGYSVMASFLGMQLSGNINQNGITVFAPTDEMVMNRIGDFEDYPSFFRRHVVPCKFLWNDLVDFGDGTQLPTFLEGFSINITRSGGVLILNGVPVFFPDVFFNDRLVVHGVTDVLANAVQDDTSAVVDPAVSSDGDQNLFDP 337
BLAST of rna-XM_004496932.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4WGR8|A0A9D4WGR8_PEA (FAS1 domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_065932 PE=3 SV=1) HSP 1 Score: 532.717 bits (1371), Expect = 0.000e+0 Identity = 279/342 (81.58%), Postives = 301/342 (88.01%), Query Frame = 0 Query: 1 MASFLILVSSLFIFFFFSFSFALPREAIFDAADVLSDSGFVSMSLTLEIVAETLLEQSPSATVFAPSDSAFKKSGQPSLDLLRFHFVMLPLPPQSFRRLPSGAKLPTMLTGQSLTVTTSPSDQSTSLNNIKIIGSPIYDDGFLLVYGIDRFFDPSFQYNGPNPKPNSNSNLNSSCTATNRTMNSSDSFDQVIGTLKSSGYSAMASFLGMQLSGDIDQNGITVFAPADEMVINRIGDFEDYPSFFRRHVVPCKFLWNDLVDFVDGSELPTFLEGFTINITRSGGVLVLNGVPVFFPDIFFNDRVVVHGVSDVLAVQVQDDTSAVVDTDFFSDDDQNVFDPGEF 342 MASFL LVSSLFIFFF + ALP EAI+DAAD+L+D+G+VSMSLTLEI+AE++LEQSPSATVFAPSDSAFKKSGQPSLDLLRFH VMLPLP SFRRLP+GAKLPTML GQSLTVTTS SD SLNNIKI G PIYDDG LLVYGIDRFFDPSFQY G N +PNSN SC A NRT+NSS+SFDQ I TLK+SGYSAMASFLGMQLSGDI QNGITVFAPADE VINR+G EDYPSFFRRHVVPCKFLWNDLVDFVDG+ELPTFLEGFTINITRSGGVL+ NGVPV+FPD+FFN RVVVHGVSDVL V +D TSAVVD D FSD+DQN+FDPGEF Sbjct: 1 MASFLFLVSSLFIFFFSF-TGALPSEAIYDAADILTDAGYVSMSLTLEIIAESILEQSPSATVFAPSDSAFKKSGQPSLDLLRFHLVMLPLPLSSFRRLPAGAKLPTMLPGQSLTVTTSTSDHDISLNNIKITGLPIYDDGVLLVYGIDRFFDPSFQYTGSNQRPNSNP----SCAAINRTVNSSESFDQAIQTLKTSGYSAMASFLGMQLSGDISQNGITVFAPADENVINRLGVLEDYPSFFRRHVVPCKFLWNDLVDFVDGTELPTFLEGFTINITRSGGVLIFNGVPVYFPDVFFNGRVVVHGVSDVLTVP-EDATSAVVDADSFSDEDQNLFDPGEF 336
BLAST of rna-XM_004496932.3 vs. UniProtKB/TrEMBL
Match: tr|A0A392MN26|A0A392MN26_9FABA (Fasciclin-like arabinogalactan protein OS=Trifolium medium OX=97028 GN=A2U01_0009394 PE=3 SV=1) HSP 1 Score: 522.702 bits (1345), Expect = 0.000e+0 Identity = 261/325 (80.31%), Postives = 286/325 (88.00%), Query Frame = 0 Query: 19 FSFALPREAIFDAADVLSDSGFVSMSLTLEIVAETLLEQSPSATVFAPSDSAFKKSGQPSLDLLRFHFVMLPLPPQSFRRLPSGAKLPTMLTGQSLTVTTSPSDQSTSLNNIKIIGSPIYDDGFLLVYGIDRFFDPSFQYNGPNPKPNSNSNLNSSCTATNRTMNSSDSFDQVIGTLKSSGYSAMASFLGMQLSGDIDQNGITVFAPADEMVINRIGDFEDYPSFFRRHVVPCKFLWNDLVDFVDGSELPTFLEGFTINITRSGGVLVLNGVPVFFPDIFFNDRVVVHGVSDVLAVQVQDDTSA-VVDTDFFSDDDQNVFDPGEF 342 FS A+PRE I+DAADVL+D+G+VSMSLTLEI+AE LLEQSPSATVFAPSDSAFKK GQPSLDLLRFHFVMLPLP QSFRRLP+GAKLPTM TGQSLTVTTSP D + S+NNIK+ PIYDDG LLVYGIDRFFD ++Y GPN +PNSN SSCTA NRTMNSS+SFDQ + LK+SGYSAMASFLGMQLSGDI QNGITVFAPAD VINRIGDF+DYPSFFRRHVVPCKF+WNDLV+F DG+ELPTFLEGFTINITRSGGVL+LNGV VFFP+ F NDRVVVHGVSDVL VQ + TS+ VVD D FS+DDQNVFDPGEF Sbjct: 18 FSTAIPREVIYDAADVLTDAGYVSMSLTLEIIAEPLLEQSPSATVFAPSDSAFKKYGQPSLDLLRFHFVMLPLPFQSFRRLPAGAKLPTMFTGQSLTVTTSPPDHAISINNIKVTPLPIYDDGILLVYGIDRFFDTGYEYAGPNQRPNSNPI--SSCTAMNRTMNSSNSFDQAVEMLKTSGYSAMASFLGMQLSGDISQNGITVFAPADVNVINRIGDFQDYPSFFRRHVVPCKFVWNDLVNFGDGTELPTFLEGFTINITRSGGVLILNGVTVFFPNAFLNDRVVVHGVSDVLTVQDEATTSSVVVDADVFSEDDQNVFDPGEF 340
BLAST of rna-XM_004496932.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6MLQ9|A0A2Z6MLQ9_TRISU (FAS1 domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_49040 PE=3 SV=1) HSP 1 Score: 521.546 bits (1342), Expect = 0.000e+0 Identity = 259/325 (79.69%), Postives = 288/325 (88.62%), Query Frame = 0 Query: 19 FSFALPREAIFDAADVLSDSGFVSMSLTLEIVAETLLEQSPSATVFAPSDSAFKKSGQPSLDLLRFHFVMLPLPPQSFRRLPSGAKLPTMLTGQSLTVTTSPSDQSTSLNNIKIIGSPIYDDGFLLVYGIDRFFDPSFQYNGPNPKPNSNSNLNSSCTATNRTMNSSDSFDQVIGTLKSSGYSAMASFLGMQLSGDIDQNGITVFAPADEMVINRIGDFEDYPSFFRRHVVPCKFLWNDLVDFVDGSELPTFLEGFTINITRSGGVLVLNGVPVFFPDIFFNDRVVVHGVSDVLAVQVQDDTSA-VVDTDFFSDDDQNVFDPGEF 342 FS A+PREAI+DAADVL+DSG+VSMSLTLEI+AE+LLEQSPSATVFAPSDSAFKK GQPS +LLRFHFVMLPLP Q+FRRLP+GAKLPTML G+SLTVTTSP D + S+NNIK+ SPIYDDG L+VYGIDRFFD S++Y GPN +PNSN SSCTA NRTMNSS+SFDQ I LKS+GYSAMASFLGMQLSGDI QNGITVFAPAD VI+RIGDF+DYPSFFRRHVVPCKF+WNDLV+F DG+ELPTFLEGFTINITRSGGVL+LN VPVFFP +F NDRVVVHGVSDV VQ + TS+ VVD D FS+DDQNVFDPGEF Sbjct: 18 FSTAIPREAIYDAADVLTDSGYVSMSLTLEIIAESLLEQSPSATVFAPSDSAFKKFGQPSFNLLRFHFVMLPLPFQTFRRLPAGAKLPTMLAGKSLTVTTSPPDHAISINNIKVTPSPIYDDGILIVYGIDRFFDTSYEYTGPNQRPNSNPI--SSCTAMNRTMNSSNSFDQAIEMLKSNGYSAMASFLGMQLSGDISQNGITVFAPADVNVISRIGDFQDYPSFFRRHVVPCKFIWNDLVNFGDGTELPTFLEGFTINITRSGGVLILNSVPVFFPHVFENDRVVVHGVSDVFTVQDEATTSSEVVDADVFSEDDQNVFDPGEF 340
BLAST of rna-XM_004496932.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3L3U6|A0A2K3L3U6_TRIPR (FAS1 domain-containing protein OS=Trifolium pratense OX=57577 GN=L195_g029111 PE=3 SV=1) HSP 1 Score: 500.745 bits (1288), Expect = 6.931e-176 Identity = 251/324 (77.47%), Postives = 280/324 (86.42%), Query Frame = 0 Query: 19 FSFALPREAIFDAADVLSDSGFVSMSLTLEIVAETLLEQSPSATVFAPSDSAFKKSGQPSLDLLRFHFVMLPLPPQSFRRLPSGAKLPTMLTGQSLTVTTSPSDQSTSLNNIKIIGSPIYDDGFLLVYGIDRFFDPSFQYNGPNPKPNSNSNLNSSCTATNRTMNSSDSFDQVIGTLKSSGYSAMASFLGMQLSGDIDQNGITVFAPADEMVINRIGDFEDYPSFFRRHVVPCKFLWNDLVDFVDGSELPTFLEGFTINITRSGGVLVLNGVPVFFPDIFFNDRVVVHGVSDVLAVQVQDDTSAVVDTDFFSDDDQNVFDPGEF 342 FS A+PRE I+DAADVL+D+G+VSMSLTLEI+AE LLEQSPSATVFAPSDSAFKK GQPSLDLLRFHFVMLPLP QSFRRLP+GAKLPTM TGQSLTVTTSP D + S+NNIK+ SPIYDDG LLVYGIDRFFD ++Y GPN +PNSN SSCTA NRTMNSS+SFDQ + LK+SGYSAMASFLGMQLSGDI +NGITVFAP D VINRI +F+DYPSFFRRHVVPCKF+W+DLV+F DG+ LPTFLEGFTINI+RSGGVL+ N VPVFFP+ F NDRVVVHGVSDVL VQ + TS+ D FS+DDQNVFDPGEF Sbjct: 18 FSTAIPREVIYDAADVLTDAGYVSMSLTLEIIAEPLLEQSPSATVFAPSDSAFKKYGQPSLDLLRFHFVMLPLPFQSFRRLPAGAKLPTMFTGQSLTVTTSPPDHAISINNIKVTPSPIYDDGILLVYGIDRFFDTGYEYRGPNQRPNSNP--ISSCTAMNRTMNSSNSFDQAVEMLKTSGYSAMASFLGMQLSGDISRNGITVFAPTDVNVINRIVEFQDYPSFFRRHVVPCKFVWDDLVNFGDGTVLPTFLEGFTINISRSGGVLIFNTVPVFFPNAFDNDRVVVHGVSDVLTVQDEATTSS----DVFSEDDQNVFDPGEF 335
BLAST of rna-XM_004496932.3 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8M8B5|A0A8B8M8B5_ABRPR (Fasciclin-like arabinogalactan protein 20 OS=Abrus precatorius OX=3816 GN=LOC113871875 PE=3 SV=1) HSP 1 Score: 477.248 bits (1227), Expect = 1.040e-166 Identity = 242/322 (75.16%), Postives = 265/322 (82.30%), Query Frame = 0 Query: 21 FALPREAIFDAADVLSDSGFVSMSLTLEIVAETLLEQSPSATVFAPSDSAFKKSGQPSLDLLRFHFVMLPLPPQSFRRLPSGAKLPTMLTGQSLTVTTSPSDQSTSLNNIKIIGSPIYDDGFLLVYGIDRFFDPSFQYNGPNPKPNSNSNLNSSCTATNRTMNSSDSFDQVIGTLKSSGYSAMASFLGMQLSGDIDQNGITVFAPADEMVINRIGDFEDYPSFFRRHVVPCKFLWNDLVDFVDGSELPTFLEGFTINITRSGGVLVLNGVPVFFPDIFFNDRVVVHGVSDVLAVQVQDDTSAVVDTDFFSDDDQNVFDPGEF 342 FALPREAIFDAAD+LSDS FVSM+LTLEIVAE LLEQSPSATVFAPSDSAFKKSGQPSLDLLRFH LPLPP S R LP+GA++PTML GQSLTVTTSPS++ SLNNIK+ SPIYDDGFLLVYG +RFFDPSFQ+N P PNS NSSC+ N T +SSDSFDQ I TL+S GYS MASFLGMQLSG +Q+GITVFAPADE V NRIGDF +YPSFFRRHVVPC+ LWNDLVD DGSEL TFLEGF INITRS GVL+LNGVPVFFPD+FFND+VVVHGVSDVLA D+T V DD++ VFDP E Sbjct: 19 FALPREAIFDAADILSDSSFVSMALTLEIVAENLLEQSPSATVFAPSDSAFKKSGQPSLDLLRFHLAPLPLPPASLRLLPAGARIPTMLPGQSLTVTTSPSERVASLNNIKLTESPIYDDGFLLVYGTERFFDPSFQFNNQRPNPNS----NSSCSGKNHTQSSSDSFDQAIETLRSGGYSTMASFLGMQLSGVAEQSGITVFAPADETVANRIGDFSEYPSFFRRHVVPCRLLWNDLVDLGDGSELRTFLEGFAINITRSDGVLILNGVPVFFPDVFFNDKVVVHGVSDVLA--AHDNTLRV-------DDERIVFDPSEL 327
BLAST of rna-XM_004496932.3 vs. UniProtKB/TrEMBL
Match: tr|A0A445ITH3|A0A445ITH3_GLYSO (Putative fasciclin-like arabinogalactan protein 20 OS=Glycine soja OX=3848 GN=D0Y65_028221 PE=3 SV=1) HSP 1 Score: 469.159 bits (1206), Expect = 2.151e-163 Identity = 243/327 (74.31%), Postives = 272/327 (83.18%), Query Frame = 0 Query: 18 SFSFALPREAIFDAADVLSDSGFVSMSLTLEIVAETLLEQSPSATVFAPSDSAFKKSGQPSLDLLRFHFVMLPLPPQSFRRLPSGAKLPTMLTGQSLTVTTSPSDQSTSLNNIKIIGSPIYDDGFLLVYGIDRFFDPSFQYNGPNPKPNSNSNLNSSCTATNRTMNSSDSFDQVIGTLKSSGYSAMASFLGMQLSGDIDQNGITVFAPADEMVINRIGDFEDYPSFFRRHVVPCKFLWNDLVDFVDGSELPTFLEGFTINITRSGGVLVLNGVPVFFPDIFFNDRVVVHGVSDVLAVQVQDDTSAVVDTDF--FSDDDQNVFDPGEF 342 SF ALPREAIFDAADVLSDSG+VSM+LTLEIVAETLLEQSPSATVFAPSDSAFKKSGQPSLDLLRFH LPLPP S R L +G+K+PTML GQ+LTVTTS SD+ TS NNIK+ GSPIYDDG LLVYGIDRFFDP+FQ+N P NS ++SC+A N T ++SDSFDQ I TLK+ GYSAMASFLGMQLSG DQ+GITVFAP D+ V++RIGDF +YPSFFRRHVVPC+ LWNDLV+F DGSELPTFL+GF INITRS GVL+LNGVPVFFPD+FFNDRVVVHGVSDVLA Q SA+ D DDD+ +FDP EF Sbjct: 18 SFGRALPREAIFDAADVLSDSGYVSMALTLEIVAETLLEQSPSATVFAPSDSAFKKSGQPSLDLLRFHLSPLPLPPASLRLLTAGSKIPTMLPGQTLTVTTSSSDRVTSFNNIKLTGSPIYDDGILLVYGIDRFFDPTFQFNSQRPSDNS----DTSCSAKNHTASASDSFDQAIQTLKTGGYSAMASFLGMQLSGVADQSGITVFAPTDDTVMSRIGDFGEYPSFFRRHVVPCRLLWNDLVNFGDGSELPTFLDGFAINITRSDGVLILNGVPVFFPDVFFNDRVVVHGVSDVLAAQ----DSAIKDNALRIDDDDDEILFDPSEF 336
BLAST of rna-XM_004496932.3 vs. UniProtKB/TrEMBL
Match: tr|K7LLL3|K7LLL3_SOYBN (FAS1 domain-containing protein OS=Glycine max OX=3847 GN=100814995 PE=3 SV=1) HSP 1 Score: 468.389 bits (1204), Expect = 5.440e-163 Identity = 243/328 (74.09%), Postives = 275/328 (83.84%), Query Frame = 0 Query: 18 SFSFALPREAIFDAADVLSDSGFVSMSLTLEIVAETLLEQSPSATVFAPSDSAFKKSGQPSLDLLRFHFVMLPLPPQSFRRLPSGAKLPTMLTGQSLTVTTSPSDQSTSLNNIKIIGSPIYDDGFLLVYGIDRFFDPSFQYNGPNPKPNSNSNLNSSCTATNRTMNSSDSFDQVIGTLKSSGYSAMASFLGMQLSGDIDQNGITVFAPADEMVINRIGDFEDYPSFFRRHVVPCKFLWNDLVDFVDGSELPTFLEGFTINITRSGGVLVLNGVPVFFPDIFFNDRVVVHGVSDVLAVQ---VQDDTSAVVDTDFFSDDDQNVFDPGEF 342 SF ALPREAIFDAADVLSDSG+VSM+LTLEIVAETLLEQSPSATVFAPSDSAFKKSGQPSLDLLRFH LPLPP S R L +G+K+PTML GQ+LTVTTS SD+ TS NNIK+ GSPIYDDG LLVYGIDRFFDP+FQ+N P NS ++SC+A N T ++SDSFDQ I TLK+ GYSAMASFLGMQLSG DQ+GITVFAP D+ V++RIGDF +YPSFFRRHVVPC+ LWNDLV+F DGSELPTFL+GF INITRS GVL+LNGVPVFFPD+FFNDRVVVHGVSDVLA Q ++D+ A+ D DDD+ +FDP EF Sbjct: 18 SFGRALPREAIFDAADVLSDSGYVSMALTLEIVAETLLEQSPSATVFAPSDSAFKKSGQPSLDLLRFHLSPLPLPPASLRLLTAGSKIPTMLPGQTLTVTTSSSDRVTSFNNIKLTGSPIYDDGILLVYGIDRFFDPTFQFNSQRPSDNS----DTSCSAKNHTASASDSFDQAIQTLKTGGYSAMASFLGMQLSGVADQSGITVFAPTDDTVMSRIGDFGEYPSFFRRHVVPCRLLWNDLVNFGDGSELPTFLDGFAINITRSDGVLILNGVPVFFPDVFFNDRVVVHGVSDVLAAQDSAIKDN--ALRIDDDDDDDDEILFDPSEF 339 The following BLAST results are available for this feature:
BLAST of rna-XM_004496932.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11) Total hits: 3
BLAST of rna-XM_004496932.3 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot) Total hits: 3
BLAST of rna-XM_004496932.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_004496932.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496932.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496932.3; organism=Cicer arietinum; type=mRNA; length=1029bpback to top protein sequence of rna-XM_004496932.3_CaCDCfrontier-NCBI_v1 >rna-XM_004496932.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496932.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496932.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=342bpback to top mRNA from alignment at chr4:15261739..15263143- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_004496932.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496932.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496932.3; organism=Cicer arietinum; type=mRNA; length=1405bp; location=Sequence derived from: chr4:15261739..15263143- (Cicer arietinumback to top Coding sequence (CDS) from alignment at chr4:15261739..15263143- >rna-XM_004496932.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496932.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496932.3; organism=Cicer arietinum; type=CDS; length=1029bp; location=Sequence derived from: chr4:15261739..15263143- (Cicer arietinumback to top |