rna-XM_004497177.3

Transcript Overview
Namerna-XM_004497177.3
Unique Namerna-XM_004497177.3_CaCDCfrontier-NCBI_v1
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length477
ProductE2F-associated phosphoprotein, transcript variant X1
References
External references for this mRNA
DatabaseAccession
GeneID101488304
GenBankXM_004497177.3
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr4chromosomechr4:17602539..17605764 +Cicer arietinum CDC Frontier NCBI RefSeq v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
cacanL131Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancanL0632Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0778Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL1030Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caicanL0408Cicer arietinum ICC 4958 genome v2Cicer arietinum
canccR0497Cajanus cajan Asha genome v1.0Cajanus cajan
canvrvR312Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cantifR257Vicia faba cv. Tiffany genome v1.0Vicia faba
canpvR353Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvfhR267Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canvssR270Vicia sativa cv. Studenica genome v1.0Vicia sativa
canzwsR238Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuR266Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvuaR266Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canpsR284Pisum sativum Cameor genome v1aPisum sativum
canpsR308Pisum sativum Cameor genome v1aPisum sativum
avjcanL310Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cancarR212Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.3g008800.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-TanjilR_24689Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun07g281600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Phvul.007G015100.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
jg12693.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-XM_014655714.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
evm.model.Chr07.148Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Psat6g233640.1Pisum sativum Cameor genome v1aPisum sativum
Vfaba.Tiffany.R1.3g005440.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Psat06G0629800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Va02G072430.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-KK1_008413Cajanus cajan Asha genome v1.0Cajanus cajan

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Ca_05371Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Ca_10728.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC101488304gene-LOC101488304_CaCDCfrontier-NCBI_v1Cicer arietinumgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_004497177.3-1exon-XM_004497177.3-1_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_004497177.3-2exon-XM_004497177.3-2_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_004497177.3-3exon-XM_004497177.3-3_CaCDCfrontier-NCBI_v1Cicer arietinumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_004497234.1cds-XP_004497234.1_CaCDCfrontier-NCBI_v1Cicer arietinumCDS
cds-XP_004497234.1cds-XP_004497234.1_CaCDCfrontier-NCBI_v1_2Cicer arietinumCDS
cds-XP_004497234.1cds-XP_004497234.1_CaCDCfrontier-NCBI_v1_3Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_004497177.3_CaCDCfrontier-NCBI_v1rna-XM_004497177.3_CaCDCfrontier-NCBI_v1Cicer arietinumpolypeptide
rna-XM_004497177.3_CaCDCfrontier-NCBI_v1rna-XM_004497177.3_CaCDCfrontier-NCBI_v1-proteinCicer arietinumpolypeptide


Homology
[Close]
BLAST of rna-XM_004497177.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:2677153-2678603 FORWARD LENGTH=150)

HSP 1 Score: 187.963 bits (476), Expect = 8.821e-62
Identity = 88/150 (58.67%), Postives = 115/150 (76.67%), Query Frame = 0 
Query:    8 SPSNSQQTVSDDDEIDYSTKPEFYDPELDDKDEKWIHKKKHGCDSDAVLCCPACFTTLCLECQRHEKYLTQYRAIFVVNCKIENKQVPRQSSSSSRSRKRNRSNEAFDGSDAVSTSNETLKQVCCSICSTEVGVIDEDEVYHFFNVLPSE 157
            SP+NSQ+TVSDD+E+DYS KPEFYD ++DDKDE W+ KK+ G  SDA+L CPACFTT+CLECQRHE+Y+TQYRA+FVVNCK+    V +Q++   +  KR R +E     +  S  +E +  V CS CSTE+GV+D +E+YHFFNV+PSE
Sbjct:    3 SPTNSQKTVSDDEEVDYSIKPEFYDSDIDDKDELWMDKKRDGRTSDALLSCPACFTTVCLECQRHEQYVTQYRAVFVVNCKVGTDTVLQQNTMPLKVGKRRRDSEM---QETGSEDSEKVNPVFCSACSTEIGVVDSEEIYHFFNVIPSE 149
[Close]
BLAST of rna-XM_004497177.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:2677153-2677887 FORWARD LENGTH=107)

HSP 1 Score: 102.449 bits (254), Expect = 1.138e-28
Identity = 46/65 (70.77%), Postives = 57/65 (87.69%), Query Frame = 0 
Query:    8 SPSNSQQTVSDDDEIDYSTKPEFYDPELDDKDEKWIHKKKHGCDSDAVLCCPACFTTLCLECQRH 72
            SP+NSQ+TVSDD+E+DYS KPEFYD ++DDKDE W+ KK+ G  SDA+L CPACFTT+CLECQR+
Sbjct:    3 SPTNSQKTVSDDEEVDYSIKPEFYDSDIDDKDELWMDKKRDGRTSDALLSCPACFTTVCLECQRY 67
[Close]
BLAST of rna-XM_004497177.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q56P03|EAPP_HUMAN (E2F-associated phosphoprotein OS=Homo sapiens OX=9606 GN=EAPP PE=1 SV=4)

HSP 1 Score: 130.954 bits (328), Expect = 8.476e-37
Identity = 71/165 (43.03%), Postives = 94/165 (56.97%), Query Frame = 0 
Query:   13 QQTVSDDDEIDYSTKPEFYDPELDDKDEKWIHKKKHGC---------------DSDAVLCCPACFTTLCLECQRHEKYLTQYRAIFVVNCKIENKQVPRQSSSSSRSRKR----NRSNEAFDGSDAVSTSNETLKQVCCSICSTEVGVIDEDEVYHFFNVLPSES 158
            Q  +  +DE+        YDPE D++D+ W+  ++ G                +SDAVL CPAC TTLCL+CQRHE Y TQYRA+FV+NC I  ++V R  +S +R ++R     RSN       A +   E    V C+ CSTEV V D+DEV+HFFNVL S S
Sbjct:  128 QHKIPTNDEL-------LYDPEKDNRDQAWVDAQRRGYHGLGPQRSRQQQPVPNSDAVLNCPACMTTLCLDCQRHESYKTQYRAMFVMNCSINKEEVLRYKASENRKKRRVHKKMRSNREDAAEKAETDVEEIYHPVMCTECSTEVAVYDKDEVFHFFNVLASHS 285
[Close]
BLAST of rna-XM_004497177.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q5BU09|EAPP_MOUSE (E2F-associated phosphoprotein OS=Mus musculus OX=10090 GN=Eapp PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 1.412e-35
Identity = 69/163 (42.33%), Postives = 93/163 (57.06%), Query Frame = 0 
Query:   13 QQTVSDDDEIDYSTKPEFYDPELDDKDEKWIHKKKHGC----------------DSDAVLCCPACFTTLCLECQRHEKYLTQYRAIFVVNCKIENKQVPRQSSSSSRSRKRNRSNEAFDGSD-AVSTSNETLKQVCCSICSTEVGVIDEDEVYHFFNVLPSES 158
            Q  +  +DE+        YDPE D++D+ W+  K+ G                 +SDAVL CPAC TTLCL+CQRHE Y TQYRA+FV+NC I  ++V R  +  +R ++R+      +  D A   + E    V C+ CSTEV V D+DEV+HFFNVL S S
Sbjct:  126 QHRIPTNDEL-------LYDPEKDNRDQAWVDAKRRGYHAFGLQRPRQKQQPVPNSDAVLNCPACMTTLCLDCQRHESYKTQYRAMFVMNCSINREEVLRYKNPENRRKRRSAKKMRSNPEDPAEREAEEIYHPVMCTECSTEVAVYDKDEVFHFFNVLASHS 281
[Close]
BLAST of rna-XM_004497177.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y217|A0A1S2Y217_CICAR (E2F-associated phosphoprotein isoform X1 OS=Cicer arietinum OX=3827 GN=LOC101488304 PE=4 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 4.113e-113
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0 
Query:    1 MEQGDAKSPSNSQQTVSDDDEIDYSTKPEFYDPELDDKDEKWIHKKKHGCDSDAVLCCPACFTTLCLECQRHEKYLTQYRAIFVVNCKIENKQVPRQSSSSSRSRKRNRSNEAFDGSDAVSTSNETLKQVCCSICSTEVGVIDEDEVYHFFNVLPSES 158
            MEQGDAKSPSNSQQTVSDDDEIDYSTKPEFYDPELDDKDEKWIHKKKHGCDSDAVLCCPACFTTLCLECQRHEKYLTQYRAIFVVNCKIENKQVPRQSSSSSRSRKRNRSNEAFDGSDAVSTSNETLKQVCCSICSTEVGVIDEDEVYHFFNVLPSES
Sbjct:    1 MEQGDAKSPSNSQQTVSDDDEIDYSTKPEFYDPELDDKDEKWIHKKKHGCDSDAVLCCPACFTTLCLECQRHEKYLTQYRAIFVVNCKIENKQVPRQSSSSSRSRKRNRSNEAFDGSDAVSTSNETLKQVCCSICSTEVGVIDEDEVYHFFNVLPSES 158
[Close]
BLAST of rna-XM_004497177.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6LZS8|A0A2Z6LZS8_TRISU (E2F-associated phosphoprotein OS=Trifolium subterraneum OX=3900 GN=TSUD_51910 PE=4 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 2.039e-94
Identity = 143/158 (90.51%), Postives = 151/158 (95.57%), Query Frame = 0 
Query:    1 MEQGDAKSPSNSQQTVSDDDEIDYSTKPEFYDPELDDKDEKWIHKKKHGCDSDAVLCCPACFTTLCLECQRHEKYLTQYRAIFVVNCKIENKQVPRQSSSSSRSRKRNRSNEAFDGSDAVSTSNETLKQVCCSICSTEVGVIDEDEVYHFFNVLPSES 158
            ME+GDAKSP+NSQQT+SDDDEIDYSTKPEFYDPELDDKDEKWIHKK+HG DSDAVLCCPACFTTLCLECQRHEKYLTQYRAIFV NCKIE+KQVP QSSS SRSRKRNR NE FDGSDA+STSNETLKQVCC++CSTEVGV DEDEVYHFFNVLPSES
Sbjct:    1 MEEGDAKSPTNSQQTISDDDEIDYSTKPEFYDPELDDKDEKWIHKKRHGSDSDAVLCCPACFTTLCLECQRHEKYLTQYRAIFVTNCKIEDKQVPTQSSSKSRSRKRNRRNEGFDGSDAISTSNETLKQVCCAVCSTEVGVFDEDEVYHFFNVLPSES 158
[Close]
BLAST of rna-XM_004497177.3 vs. UniProtKB/TrEMBL
Match: tr|G7IE91|G7IE91_MEDTR (E2F-associated phosphoprotein OS=Medicago truncatula OX=3880 GN=11423878 PE=4 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 2.781e-89
Identity = 140/158 (88.61%), Postives = 149/158 (94.30%), Query Frame = 0 
Query:    1 MEQGDAKSPSNSQQTVSDDDEIDYSTKPEFYDPELDDKDEKWIHKKKHGCDSDAVLCCPACFTTLCLECQRHEKYLTQYRAIFVVNCKIENKQVPRQSSSSSRSRKRNRSNEAFDGSDAVSTSNETLKQVCCSICSTEVGVIDEDEVYHFFNVLPSES 158
            ME+GD+KSP+NS+Q VSDDDEIDYSTKPEFYDPELDDKDEKWIHKKKHG  SDAVL CPACFTTLCLECQRHEKYLTQYRAIFV NCKIE+KQVP QSSS SRS+KRNR NE FDGSDA+STSNET+KQVCCS+CSTEVGVIDEDEVYHFFNVLPSES
Sbjct:    1 MEEGDSKSPANSEQIVSDDDEIDYSTKPEFYDPELDDKDEKWIHKKKHG-RSDAVLSCPACFTTLCLECQRHEKYLTQYRAIFVSNCKIEDKQVPIQSSSRSRSKKRNRRNEGFDGSDAISTSNETIKQVCCSVCSTEVGVIDEDEVYHFFNVLPSES 157
[Close]
BLAST of rna-XM_004497177.3 vs. UniProtKB/TrEMBL
Match: tr|A0A151TQ73|A0A151TQ73_CAJCA (E2F-associated phosphoprotein OS=Cajanus cajan OX=3821 GN=KK1_008413 PE=4 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.296e-87
Identity = 126/153 (82.35%), Postives = 137/153 (89.54%), Query Frame = 0 
Query:    6 AKSPSNSQQTVSDDDEIDYSTKPEFYDPELDDKDEKWIHKKKHGCDSDAVLCCPACFTTLCLECQRHEKYLTQYRAIFVVNCKIENKQVPRQSSSSSRSRKRNRSNEAFDGSDAVSTSNETLKQVCCSICSTEVGVIDEDEVYHFFNVLPSES 158
            A SP+NSQQTVSDDDEIDY+TKPEFYDPELD+KDE+WI KK+HGCDSDAVL CPACFTTLCLECQRHEKYLTQYRAIFVVNCKI N +V RQ  ++SRSRKRNR  E FDG DA ST  ET KQVCCS+CSTEVGVID+DEVYHF+NVLPSES
Sbjct:   10 ADSPTNSQQTVSDDDEIDYTTKPEFYDPELDNKDERWIDKKRHGCDSDAVLSCPACFTTLCLECQRHEKYLTQYRAIFVVNCKIGNDKVLRQ--NNSRSRKRNRGTEGFDGDDARSTDIETFKQVCCSVCSTEVGVIDQDEVYHFYNVLPSES 160
[Close]
BLAST of rna-XM_004497177.3 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8MIN3|A0A8B8MIN3_ABRPR (E2F-associated phosphoprotein OS=Abrus precatorius OX=3816 GN=LOC113873246 PE=4 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 3.263e-86
Identity = 123/157 (78.34%), Postives = 140/157 (89.17%), Query Frame = 0 
Query:    2 EQGDAKSPSNSQQTVSDDDEIDYSTKPEFYDPELDDKDEKWIHKKKHGCDSDAVLCCPACFTTLCLECQRHEKYLTQYRAIFVVNCKIENKQVPRQSSSSSRSRKRNRSNEAFDGSDAVSTSNETLKQVCCSICSTEVGVIDEDEVYHFFNVLPSES 158
            E  +  SP+NSQQTVSDDDEIDY++KPEFYDP+LDDKDEKWIHK++ G +SDAVL CPACFTTLCLECQRHEKYLTQYRA+FVVNCKI N +V RQ  +SSRSRKRNR  E FDG+DA S+++ET KQVCCS+CSTEVGVIDEDEVYHF+NVLPSES
Sbjct:    8 ENKNMDSPTNSQQTVSDDDEIDYTSKPEFYDPDLDDKDEKWIHKRRQGRESDAVLSCPACFTTLCLECQRHEKYLTQYRAVFVVNCKIGNDKVLRQ--NSSRSRKRNRGAEGFDGNDARSSNSETFKQVCCSVCSTEVGVIDEDEVYHFYNVLPSES 162
[Close]
BLAST of rna-XM_004497177.3 vs. UniProtKB/TrEMBL
Match: tr|A0A445IU65|A0A445IU65_GLYSO (E2F-associated phosphoprotein isoform A OS=Glycine soja OX=3848 GN=D0Y65_028412 PE=4 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 4.941e-85
Identity = 122/151 (80.79%), Postives = 135/151 (89.40%), Query Frame = 0 
Query:    8 SPSNSQQTVSDDDEIDYSTKPEFYDPELDDKDEKWIHKKKHGCDSDAVLCCPACFTTLCLECQRHEKYLTQYRAIFVVNCKIENKQVPRQSSSSSRSRKRNRSNEAFDGSDAVSTSNETLKQVCCSICSTEVGVIDEDEVYHFFNVLPSES 158
            SP+NSQQTVSDDDEIDY+TKPEFYDP+LDD DEKWI KK+HG DSDAVL CPACFTTLCLECQRHEKYLTQYRA+FVVNCKI N +V +Q  ++SRSRKRNR  E FDG DA ST+ ET KQVCCS+CSTEVGVID+DE+YHFFNVLPSES
Sbjct:   12 SPTNSQQTVSDDDEIDYTTKPEFYDPDLDDNDEKWIDKKRHGHDSDAVLSCPACFTTLCLECQRHEKYLTQYRAVFVVNCKIGNDKVLKQ--NTSRSRKRNRGKEGFDGDDAHSTNIETFKQVCCSVCSTEVGVIDQDEIYHFFNVLPSES 160
[Close]
BLAST of rna-XM_004497177.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0R4J4D8|A0A0R4J4D8_SOYBN (E2F-associated phosphoprotein OS=Glycine max OX=3847 GN=100798473 PE=4 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 4.941e-85
Identity = 122/151 (80.79%), Postives = 135/151 (89.40%), Query Frame = 0 
Query:    8 SPSNSQQTVSDDDEIDYSTKPEFYDPELDDKDEKWIHKKKHGCDSDAVLCCPACFTTLCLECQRHEKYLTQYRAIFVVNCKIENKQVPRQSSSSSRSRKRNRSNEAFDGSDAVSTSNETLKQVCCSICSTEVGVIDEDEVYHFFNVLPSES 158
            SP+NSQQTVSDDDEIDY+TKPEFYDP+LDD DEKWI KK+HG DSDAVL CPACFTTLCLECQRHEKYLTQYRA+FVVNCKI N +V +Q  ++SRSRKRNR  E FDG DA ST+ ET KQVCCS+CSTEVGVID+DE+YHFFNVLPSES
Sbjct:   12 SPTNSQQTVSDDDEIDYTTKPEFYDPDLDDNDEKWIDKKRHGHDSDAVLSCPACFTTLCLECQRHEKYLTQYRAVFVVNCKIGNDKVLKQ--NTSRSRKRNRGKEGFDGDDAHSTNIETFKQVCCSVCSTEVGVIDQDEIYHFFNVLPSES 160
[Close]
BLAST of rna-XM_004497177.3 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q7X7Z1|A0A3Q7X7Z1_CICAR (E2F-associated phosphoprotein isoform X2 OS=Cicer arietinum OX=3827 GN=LOC101488304 PE=4 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 2.589e-83
Identity = 121/128 (94.53%), Postives = 123/128 (96.09%), Query Frame = 0 
Query:   31 YDPELDDKDEKWIHKKKHGCDSDAVLCCPACFTTLCLECQRHEKYLTQYRAIFVVNCKIENKQVPRQSSSSSRSRKRNRSNEAFDGSDAVSTSNETLKQVCCSICSTEVGVIDEDEVYHFFNVLPSES 158
            + P  +  DEKWIHKKKHGCDSDAVLCCPACFTTLCLECQRHEKYLTQYRAIFVVNCKIENKQVPRQSSSSSRSRKRNRSNEAFDGSDAVSTSNETLKQVCCSICSTEVGVIDEDEVYHFFNVLPSES
Sbjct:    4 HPPIHNKPDEKWIHKKKHGCDSDAVLCCPACFTTLCLECQRHEKYLTQYRAIFVVNCKIENKQVPRQSSSSSRSRKRNRSNEAFDGSDAVSTSNETLKQVCCSICSTEVGVIDEDEVYHFFNVLPSES 131
[Close]
BLAST of rna-XM_004497177.3 vs. UniProtKB/TrEMBL
Match: tr|A0A6A5NFD8|A0A6A5NFD8_LUPAL (Putative E2F-associated phosphoprotein OS=Lupinus albus OX=3870 GN=Lal_00011694 PE=4 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 9.950e-81
Identity = 121/162 (74.69%), Postives = 136/162 (83.95%), Query Frame = 0 
Query:    1 MEQGDAK-----SPSNSQQTVSDDDEIDYSTKPEFYDPELDDKDEKWIHKKKHGCDSDAVLCCPACFTTLCLECQRHEKYLTQYRAIFVVNCKIENKQVPRQSSSSSRSRKRNRSNEAFDGSDAVSTSNETLKQVCCSICSTEVGVIDEDEVYHFFNVLPSE 157
            ME+GDAK     SP+NSQQTVSDDDEIDY+TKPEFYDP+LDD +E W HKK+ G  SDAVL CPACFTTLCLECQRHEKYLTQYRA+FVVNCKIE  QV R   + SRSRKR+R  E F+GS+A S++ ETLKQVCCS+C TEVG IDEDE+YHFFNVLPSE
Sbjct:   29 MEEGDAKTDTVNSPTNSQQTVSDDDEIDYTTKPEFYDPDLDDNNELWAHKKRQGRISDAVLSCPACFTTLCLECQRHEKYLTQYRAVFVVNCKIEKDQVLRH--NISRSRKRDRRGERFNGSEAQSSNVETLKQVCCSVCLTEVGAIDEDEIYHFFNVLPSE 188
[Close]
BLAST of rna-XM_004497177.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UYQ8|A0A1S3UYQ8_VIGRR (E2F-associated phosphoprotein OS=Vigna radiata var. radiata OX=3916 GN=LOC106769912 PE=4 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 1.164e-80
Identity = 115/151 (76.16%), Postives = 135/151 (89.40%), Query Frame = 0 
Query:    8 SPSNSQQTVSDDDEIDYSTKPEFYDPELDDKDEKWIHKKKHGCDSDAVLCCPACFTTLCLECQRHEKYLTQYRAIFVVNCKIENKQVPRQSSSSSRSRKRNRSNEAFDGSDAVSTSNETLKQVCCSICSTEVGVIDEDEVYHFFNVLPSES 158
            SP+NSQQTVSDDDEIDY+TKPEFYDP+LDDK+E+WIHKK+ G  SDAVL CPACFTTLCLECQRHEKYLTQYRA+FV NCKI N +V +Q  ++SRSRKRNR +E FD +D  ST++ET KQVCCS+CSTEVGV+D+DE+YHF+NVLPSES
Sbjct:   15 SPTNSQQTVSDDDEIDYTTKPEFYDPDLDDKNEQWIHKKRQGRVSDAVLSCPACFTTLCLECQRHEKYLTQYRAVFVANCKIGNDKVLKQ--NTSRSRKRNRGSERFDRNDTNSTNSETFKQVCCSVCSTEVGVMDQDEIYHFYNVLPSES 163
The following BLAST results are available for this feature:
BLAST of rna-XM_004497177.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11)
Total hits: 2
Match NameE-valueIdentityDescription
|8.821e-6258.67Symbols: no symbol available | no full name availa... [more]
|1.138e-2870.77Symbols: no symbol available | no full name availa... [more]
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BLAST of rna-XM_004497177.3 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
sp|Q56P03|EAPP_HUMAN8.476e-3743.03E2F-associated phosphoprotein OS=Homo sapiens OX=9... [more]
sp|Q5BU09|EAPP_MOUSE1.412e-3542.33E2F-associated phosphoprotein OS=Mus musculus OX=1... [more]
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BLAST of rna-XM_004497177.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2Y217|A0A1S2Y217_CICAR4.113e-113100.00E2F-associated phosphoprotein isoform X1 OS=Cicer ... [more]
tr|A0A2Z6LZS8|A0A2Z6LZS8_TRISU2.039e-9490.51E2F-associated phosphoprotein OS=Trifolium subterr... [more]
tr|G7IE91|G7IE91_MEDTR2.781e-8988.61E2F-associated phosphoprotein OS=Medicago truncatu... [more]
tr|A0A151TQ73|A0A151TQ73_CAJCA1.296e-8782.35E2F-associated phosphoprotein OS=Cajanus cajan OX=... [more]
tr|A0A8B8MIN3|A0A8B8MIN3_ABRPR3.263e-8678.34E2F-associated phosphoprotein OS=Abrus precatorius... [more]
tr|A0A445IU65|A0A445IU65_GLYSO4.941e-8580.79E2F-associated phosphoprotein isoform A OS=Glycine... [more]
tr|A0A0R4J4D8|A0A0R4J4D8_SOYBN4.941e-8580.79E2F-associated phosphoprotein OS=Glycine max OX=38... [more]
tr|A0A3Q7X7Z1|A0A3Q7X7Z1_CICAR2.589e-8394.53E2F-associated phosphoprotein isoform X2 OS=Cicer ... [more]
tr|A0A6A5NFD8|A0A6A5NFD8_LUPAL9.950e-8174.69Putative E2F-associated phosphoprotein OS=Lupinus ... [more]
tr|A0A1S3UYQ8|A0A1S3UYQ8_VIGRR1.164e-8076.16E2F-associated phosphoprotein OS=Vigna radiata var... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019370E2F-associated phosphoproteinPFAMPF10238Eapp_Ccoord: 30..156
e-value: 3.2E-44
score: 161.8
IPR019370E2F-associated phosphoproteinPANTHERPTHR15967UNCHARACTERIZEDcoord: 3..158

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_004497177.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004497177.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004497177.3; organism=Cicer arietinum; type=mRNA; length=477bp
ATGGAACAAGGAGATGCCAAATCACCCTCCAATTCACAACAAACCGTTTC
TGATGACGATGAGATTGACTACTCGACTAAACCTGAGTTTTATGATCCTG
AACTTGATGATAAGGATGAAAAATGGATTCATAAAAAAAAACATGGATGT
GACTCTGATGCCGTGCTTTGCTGCCCTGCTTGCTTCACCACCCTCTGCCT
AGAATGCCAAAGGCATGAGAAATATTTGACCCAGTATAGAGCAATATTTG
TTGTAAACTGCAAGATTGAGAATAAACAAGTTCCGAGGCAAAGTAGCTCA
AGTTCAAGATCAAGAAAAAGAAATAGAAGCAACGAAGCATTTGATGGGAG
CGATGCGGTTTCAACTAGTAATGAAACATTAAAGCAAGTCTGCTGCTCGA
TTTGCTCGACAGAGGTAGGTGTCATTGATGAAGATGAGGTTTATCATTTC
TTCAATGTTCTCCCTAGTGAATCCTAA
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protein sequence of rna-XM_004497177.3_CaCDCfrontier-NCBI_v1

>rna-XM_004497177.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004497177.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004497177.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=158bp
MEQGDAKSPSNSQQTVSDDDEIDYSTKPEFYDPELDDKDEKWIHKKKHGC
DSDAVLCCPACFTTLCLECQRHEKYLTQYRAIFVVNCKIENKQVPRQSSS
SSRSRKRNRSNEAFDGSDAVSTSNETLKQVCCSICSTEVGVIDEDEVYHF
FNVLPSES
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mRNA from alignment at chr4:17602539..17605764+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_004497177.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004497177.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004497177.3; organism=Cicer arietinum; type=mRNA; length=3226bp; location=Sequence derived from: chr4:17602539..17605764+ (Cicer arietinum
CTTCAAATGTTCCGTACATTACCGACTAAAAAAATCCACTACTTTCTAGT
TTCAAAATTCGTTTCTCTATCTAGAGTTTAGAGAGAGAAAGTTTGCTAGA
GACATACAGATATGGAACAAGGAGATGCCAAATCACCCTCCAATTCACAA
CAAACCGGTAAGTAACCAACTTCATTTTCATACTTCACCTATTGGCCTCT
CAAGAATTtcaattttcttgtttttgtttataagagaagaaaaataggAA
AACAGTTATGATGCTTCTCATAATTTGAAATTACCTGCCaataaaatgtt
aatgttggaatttataattgagtttttcttatttaattaataaatgtgtt
tgtttAGTTTATCTTAATTGATTTGGTTTAGAAGttaaattaatgtcaaa
taAACAGTTTATGTGGGAAGAAATTGTTAAATGTCAGATAATTGGAAACC
TATACCTGCAATGCAATGAATTATCAAACTTGGCACGACCCTGTCAATAT
TTGCCTTGTAGTTTAGCTAGATGCTCTACTGGTTTAGTGGCAAACCTTTG
GATATGGATTCCATACAGTCCGGAGACTATATTCACTCGGTTAGCACATC
AGTGACTATTGGATCAAGATTGAATGGTCTAGATTTTAAGTTCGGTATTT
tggaaaaaaagtaaaaattggTAGTGAACTGCCTGATTTTAATCGAATCG
TCACTGATGTACTTACTCTGTGAATGCATAGCATCCCAACTACATGGAAT
CCATTTCTTAAGCCCTCACTTCCAAATAAAGGTTATATTCACATATTTTC
AATGCAGCATCTATGAACTCCATAtacatatttttacaaattgatACACA
GATATTAGTAAATTCTGCTGTCCTCTTCAAATTGCTTGGGTTTTGTAGAT
GTTGCGTCTGCATGTGTAGTTTATCCCTTCATTTAAAACTATGTTCTATA
AGCTACAAAGATTTGGCAGTACTACAGGATTTAGGGAGTTTGCTTGACAC
AATAGGTTCCCACCTACATGCTCCCAATGTACCCAAAAAAAGTTATACAT
AACCATTTAACTTGTAGATTGCTACCCTTTGTTTATTGCCTGTTAGTTTC
CAGCTGCATATGCAATGTTTGACCTTGTATTGCACCAAGCAtctcatttt
tgtttatttgatataaatatCAGTTTCTGATGACGATGAGATTGACTACT
CGACTAAACCTGAGTTTTATGATCCTGAACTTGATGATAAGGATGAAAAA
TggattcataaaaaaaaacatggatGTGACTCTGATGCCGTGCTTTGCTG
CCCTGCTTGCTTCACCACCCTCTGCCTAGAATGCCAAAGGTATACTATAT
ATGCAAACTTCTGTATTTTGTGCCTTTTCGCATGTGTTCATACACAGTTA
CACACTATATTATTGGGTAGCTTGGCCACTGCGTCTTTAAGGAGGGAGCA
TATATTAAGTGGAAACATGAAAAGCAAGGACAATTAATCTTGGCTATCCA
TATCCATAAGTGGGTAGTCAATATTAATTATCCTCGTGAGTCATGAAAAC
TATTCTCGCTAAGATATGTTTATGTCTATTACACACActttaaattaaca
tttttgtgTGTAGGAGTTCTAAACTGGTAGATTgcataattcaattattt
tatttctggTCAGAACAGTACTAGGTTGCTTGTGCATGTTATTAGATTAT
ACAAACATAACTTACAATATCCTTTATATATTACCTCGCATGTCTCTTAA
GAACCAAAGGTGACACAAAATAGAACAAAACAAAACAGATtgttcatttt
aatattttgtgtcTAATGAACAAAAACATGTTCAGTTCCATTCTATTTGC
ATACCAAATGCTACCTCACTAATTAACTgcttgttcaagttttctgatTC
CATATATCCATCTGTTTTGTCCAAGTACTGTTAAAGtaaatattttcatc
tttaaaACAATGAAAGTTCCTCCTGAAAAAATTAAAGTGCATTCTCAGGT
TTGCTTTATGTTTTAGCCTTTGATTACATAAAGATTTGTGAGGCAGGGCT
GGCCCAAGGCCAAAGTTAGTAAAGCTAGGGCTTTAGGCCtccaaaaaata
attagtttttcaTGTATATTTAGGcctccaaaaaataaaaatatttaaat
agtacAGGTAAAAGGCCTCACAATTATTAAAAGATATAACcattgacata
tttaaataaaatattttacatctcATAAAACAAGAAAtgtagaatttaaa
taaaattatagtaaatattgttgttaacattaaaaatacctctatttttt
ttatcaaaacctTGCTTTAAAGTTTGCTTTAAATTTCgctttaaaaattt
caataagtGTTGGGTCGGTCCTGCTGTGAGGTGTGAACATTAATTAGGGA
TCAAGCCTATGATCAAAGATTCATTTCCAGCATTATGCAACAAATGTTTA
TAGttggtttttaaaatatatatatatatatatatatatatatatatata
tatatatatataaatatatatatatacttttcttaaccAAAGTATAGATC
CAAGGCTTGGAGTTGAAACCTCATAACAAATTCAGTTGGTTTTTAAAATT
GCACAAGGACTTCAGAAGTCTATGATAGGACCTTATTTAATGCATTATTT
GTTCTTATCCCCCCTCAGAAAAcaaatattcaaacaaaatacatcaatGT
TGATTTTCTTAATGGGAATTTGTACTAGTATAACTGTGTTGTGGGTTGTG
ATTTCATTAGTGTCTTGCAGGCATGAGAAATATTTGACCCAGTATAGAGC
AATATTTGTTGTAAACTGCAAGATTGAGAATAAACAAGTTCCGAGGCAAA
GTAGCTCAAGTTCAAgatcaagaaaaagaaatagaagCAACGAAGCATTT
GATGGGAGCGATGCGGTTTCAACTAGTAATGAAACATTAAAGCAAGTCTG
CTGCTCGATTTGCTCGACAGAGGTAGGTGTCATTGATGAAGATGAGGTTT
ATCATTTCTTCAATGTTCTCCCTAGTGAATCCTAACTTATTCAAATGTAT
CCTGCCAAGCAGTGGTTAAATTTTGTTGCTCAATCATTCTGCTGGAATGT
GAGTTTCACTACcttgtaaaatttaaattcagaAATAGTTGCTGTCAGTA
TCTCTTTGTTTAGATCCAAGAGAACACAATTCTCCcacattgaaaatata
ttttctctctTAAAATCCAATGCAAA
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Coding sequence (CDS) from alignment at chr4:17602539..17605764+

>rna-XM_004497177.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004497177.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004497177.3; organism=Cicer arietinum; type=CDS; length=477bp; location=Sequence derived from: chr4:17602539..17605764+ (Cicer arietinum
ATGGAACAAGGAGATGCCAAATCACCCTCCAATTCACAACAAACCGTTTC
TGATGACGATGAGATTGACTACTCGACTAAACCTGAGTTTTATGATCCTG
AACTTGATGATAAGGATGAAAAATggattcataaaaaaaaacatggatGT
GACTCTGATGCCGTGCTTTGCTGCCCTGCTTGCTTCACCACCCTCTGCCT
AGAATGCCAAAGGCATGAGAAATATTTGACCCAGTATAGAGCAATATTTG
TTGTAAACTGCAAGATTGAGAATAAACAAGTTCCGAGGCAAAGTAGCTCA
AGTTCAAgatcaagaaaaagaaatagaagCAACGAAGCATTTGATGGGAG
CGATGCGGTTTCAACTAGTAATGAAACATTAAAGCAAGTCTGCTGCTCGA
TTTGCTCGACAGAGGTAGGTGTCATTGATGAAGATGAGGTTTATCATTTC
TTCAATGTTCTCCCTAGTGAATCCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR019370E2F-assoc_phosphoprotein