rna-XM_004497210.3

Transcript Overview
Namerna-XM_004497210.3
Unique Namerna-XM_004497210.3_CaCDCfrontier-NCBI_v1
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length603
Productuncharacterized LOC101498843, transcript variant X1
References
External references for this mRNA
DatabaseAccession
GeneID101498843
GenBankXM_004497210.3
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr4chromosomechr4:14478903..14480268 -Cicer arietinum CDC Frontier NCBI RefSeq v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
cacanL131Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascanL341Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascanL671Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ancanL0628Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0776Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL1029Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caicanL0398Cicer arietinum ICC 4958 genome v2Cicer arietinum
avjcanL310Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL615Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL669Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis

Orthologs
Gene/TranscriptAssemblySpecies
rna-TanjilR_19540Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_24782Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
LR48_mrnaVigan07g263900Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Va06G000400.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
LR48_mrnaVigan02g235000Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-TanjilR_30369Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Va02G067780.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Va07G067300.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Ca_05654Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Ca_10520.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC101498843gene-LOC101498843_CaCDCfrontier-NCBI_v1Cicer arietinumgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_004497210.3-4exon-XM_004497210.3-4_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_004497210.3-3exon-XM_004497210.3-3_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_004497210.3-2exon-XM_004497210.3-2_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_004497210.3-1exon-XM_004497210.3-1_CaCDCfrontier-NCBI_v1Cicer arietinumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_004497267.1cds-XP_004497267.1_CaCDCfrontier-NCBI_v1_4Cicer arietinumCDS
cds-XP_004497267.1cds-XP_004497267.1_CaCDCfrontier-NCBI_v1_3Cicer arietinumCDS
cds-XP_004497267.1cds-XP_004497267.1_CaCDCfrontier-NCBI_v1_2Cicer arietinumCDS
cds-XP_004497267.1cds-XP_004497267.1_CaCDCfrontier-NCBI_v1Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_004497210.3_CaCDCfrontier-NCBI_v1rna-XM_004497210.3_CaCDCfrontier-NCBI_v1Cicer arietinumpolypeptide
rna-XM_004497210.3_CaCDCfrontier-NCBI_v1rna-XM_004497210.3_CaCDCfrontier-NCBI_v1-proteinCicer arietinumpolypeptide


Homology
[Close]
BLAST of rna-XM_004497210.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:16210404-16211307 REVERSE LENGTH=170)

HSP 1 Score: 80.4925 bits (197), Expect = 5.309e-19
Identity = 69/185 (37.30%), Postives = 92/185 (49.73%), Query Frame = 0 
Query:    9 SSGCESGWTLYLEHSFGG----------GYYGEHKDK------IVTNDYSEGVEDLSMISDASSGPPQYLPFDDDANYFNQKNNACFYSESNLVKQNKSASKKQNVKDKNKQQLQVEDQQHLPSFLHDTASSHVFDFS--TNNDVGTN--QQTYKESMVDYSQGFSATNYFEGRSSYQEQHFGYL 173
            SSGCESGWTLYL+ S             G+    + K       V  +  E  +DLSMISDASSGP                       E ++ K N    KKQ  ++K ++     D + + S L DTASS +F+F       VG N  +QT+ ES +DYSQGFSAT  F+ ++++QEQ  GYL
Sbjct:    5 SSGCESGWTLYLDQSVSSPSPSCFRDSNGFDSRRRSKDSWDQNYVHQEEEEEEDDLSMISDASSGPRN------------------ISEEDSVKKINIVGLKKQCKREKKRR-----DYEKMNSLLDDTASSPLFNFPHMLQKSVGGNKIEQTFPESTLDYSQGFSATQ-FQDKTAFQEQ-CGYL 164
[Close]
BLAST of rna-XM_004497210.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:16210404-16211307 REVERSE LENGTH=170)

HSP 1 Score: 80.4925 bits (197), Expect = 5.309e-19
Identity = 69/185 (37.30%), Postives = 92/185 (49.73%), Query Frame = 0 
Query:    9 SSGCESGWTLYLEHSFGG----------GYYGEHKDK------IVTNDYSEGVEDLSMISDASSGPPQYLPFDDDANYFNQKNNACFYSESNLVKQNKSASKKQNVKDKNKQQLQVEDQQHLPSFLHDTASSHVFDFS--TNNDVGTN--QQTYKESMVDYSQGFSATNYFEGRSSYQEQHFGYL 173
            SSGCESGWTLYL+ S             G+    + K       V  +  E  +DLSMISDASSGP                       E ++ K N    KKQ  ++K ++     D + + S L DTASS +F+F       VG N  +QT+ ES +DYSQGFSAT  F+ ++++QEQ  GYL
Sbjct:    5 SSGCESGWTLYLDQSVSSPSPSCFRDSNGFDSRRRSKDSWDQNYVHQEEEEEEDDLSMISDASSGPRN------------------ISEEDSVKKINIVGLKKQCKREKKRR-----DYEKMNSLLDDTASSPLFNFPHMLQKSVGGNKIEQTFPESTLDYSQGFSATQ-FQDKTAFQEQ-CGYL 164
[Close]
BLAST of rna-XM_004497210.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q8L9K4|SOFL5_ARATH (Protein SOB FIVE-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=SOFL5 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.119e-18
Identity = 69/185 (37.30%), Postives = 92/185 (49.73%), Query Frame = 0 
Query:    9 SSGCESGWTLYLEHSFGG----------GYYGEHKDK------IVTNDYSEGVEDLSMISDASSGPPQYLPFDDDANYFNQKNNACFYSESNLVKQNKSASKKQNVKDKNKQQLQVEDQQHLPSFLHDTASSHVFDFS--TNNDVGTN--QQTYKESMVDYSQGFSATNYFEGRSSYQEQHFGYL 173
            SSGCESGWTLYL+ S             G+    + K       V  +  E  +DLSMISDASSGP                       E ++ K N    KKQ  ++K ++     D + + S L DTASS +F+F       VG N  +QT+ ES +DYSQGFSAT  F+ ++++QEQ  GYL
Sbjct:    5 SSGCESGWTLYLDQSVSSPSPSCFRDSNGFDSRRRSKDSWDQNYVHQEEEEEEDDLSMISDASSGPRN------------------ISEEDSVKKINIVGLKKQCKREKKRR-----DYEKMNSLLDDTASSPLFNFPHMLQKSVGGNKIEQTFPESTLDYSQGFSATQ-FQDKTAFQEQ-CGYL 164
[Close]
BLAST of rna-XM_004497210.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y097|A0A1S2Y097_CICAR (Uncharacterized protein LOC101498843 isoform X1 OS=Cicer arietinum OX=3827 GN=LOC101498843 PE=3 SV=1)

HSP 1 Score: 416.772 bits (1070), Expect = 2.566e-147
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0 
Query:    1 MSAFDSECSSGCESGWTLYLEHSFGGGYYGEHKDKIVTNDYSEGVEDLSMISDASSGPPQYLPFDDDANYFNQKNNACFYSESNLVKQNKSASKKQNVKDKNKQQLQVEDQQHLPSFLHDTASSHVFDFSTNNDVGTNQQTYKESMVDYSQGFSATNYFEGRSSYQEQHFGYLQPSLSKNEIQGNKWYGGKGMGMRGRRC 200
            MSAFDSECSSGCESGWTLYLEHSFGGGYYGEHKDKIVTNDYSEGVEDLSMISDASSGPPQYLPFDDDANYFNQKNNACFYSESNLVKQNKSASKKQNVKDKNKQQLQVEDQQHLPSFLHDTASSHVFDFSTNNDVGTNQQTYKESMVDYSQGFSATNYFEGRSSYQEQHFGYLQPSLSKNEIQGNKWYGGKGMGMRGRRC
Sbjct:    1 MSAFDSECSSGCESGWTLYLEHSFGGGYYGEHKDKIVTNDYSEGVEDLSMISDASSGPPQYLPFDDDANYFNQKNNACFYSESNLVKQNKSASKKQNVKDKNKQQLQVEDQQHLPSFLHDTASSHVFDFSTNNDVGTNQQTYKESMVDYSQGFSATNYFEGRSSYQEQHFGYLQPSLSKNEIQGNKWYGGKGMGMRGRRC 200
[Close]
BLAST of rna-XM_004497210.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3E5B2|A0A1S3E5B2_CICAR (Uncharacterized protein LOC101498843 isoform X2 OS=Cicer arietinum OX=3827 GN=LOC101498843 PE=3 SV=1)

HSP 1 Score: 331.643 bits (849), Expect = 7.677e-114
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0 
Query:    1 MSAFDSECSSGCESGWTLYLEHSFGGGYYGEHKDKIVTNDYSEGVEDLSMISDASSGPPQYLPFDDDANYFNQKNNACFYSESNLVKQNKSASKKQNVKDKNKQQLQVEDQQHLPSFLHDTASSHVFDFSTNNDVGTNQQTYKESMVDYSQGFSATNYFE 160
            MSAFDSECSSGCESGWTLYLEHSFGGGYYGEHKDKIVTNDYSEGVEDLSMISDASSGPPQYLPFDDDANYFNQKNNACFYSESNLVKQNKSASKKQNVKDKNKQQLQVEDQQHLPSFLHDTASSHVFDFSTNNDVGTNQQTYKESMVDYSQGFSATNYFE
Sbjct:    1 MSAFDSECSSGCESGWTLYLEHSFGGGYYGEHKDKIVTNDYSEGVEDLSMISDASSGPPQYLPFDDDANYFNQKNNACFYSESNLVKQNKSASKKQNVKDKNKQQLQVEDQQHLPSFLHDTASSHVFDFSTNNDVGTNQQTYKESMVDYSQGFSATNYFE 160
[Close]
BLAST of rna-XM_004497210.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3PM98|A0A2K3PM98_TRIPR (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g013126 PE=3 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 9.089e-91
Identity = 144/199 (72.36%), Postives = 167/199 (83.92%), Query Frame = 0 
Query:    1 MSAFDSECSSGCESGWTLYLEHSFGG--------GYYGEHKDKIVTNDYSEGVEDLSMISDASSGPPQYLPFDDDANYFNQKNNACFYSESNLVKQNKSASKKQNVKDKNKQQLQVEDQQHLPSFLHDTASSHVFDFSTNNDVGTNQQTYKESMVDYSQGFSATNYFEGRSSYQEQHFGYLQPSLSKNEIQGNKWYGGK 191
            MSA+DSECSSGCESGWTLYLEHS+G         GYYG+HKDK VTN+YSEGVEDLSM+SDASSGPP +LP+DDDA YFN+K+N        +VKQNKS SKKQ V++ NKQ L V+DQQ+LPSFLHDTASSHVFDFSTNN  GTNQQ Y  +MVDYSQGFSA+NYFEG+SSYQ++ FG+LQPS+S+NE+Q NKWYGGK
Sbjct:    1 MSAYDSECSSGCESGWTLYLEHSYGDTRYIGGTEGYYGKHKDKRVTNEYSEGVEDLSMVSDASSGPP-HLPYDDDA-YFNEKHN--------VVKQNKSGSKKQKVRE-NKQHL-VQDQQNLPSFLHDTASSHVFDFSTNNVGGTNQQNYTGNMVDYSQGFSASNYFEGKSSYQDEQFGFLQPSISQNELQDNKWYGGK 187
[Close]
BLAST of rna-XM_004497210.3 vs. UniProtKB/TrEMBL
Match: tr|A0A072VQE3|A0A072VQE3_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=25485325 PE=3 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 4.397e-82
Identity = 142/202 (70.30%), Postives = 164/202 (81.19%), Query Frame = 0 
Query:    1 MSAFDSECSSGCESGWTLYLEHSF------GG--GYYG-EHKDKIVTNDYSE-GVEDLSMISDASSGPPQYLPFDDDANYFNQKNNACFYSESNLVKQNKSASKKQNVKDKNKQQLQVEDQQHLPSFLHDTASSHVFDFSTNNDVGTNQQTYKESMVDYSQGFSAT-NYFEGRSSYQEQHFGYLQPSLSKNEIQGNKWYGGK 191
            MSAFDSECSSGCESGWTLYLEHS+      GG  GYYG +HKDK VTN+YSE GVEDLSM+SDASSGPP +LP+DDD  YFN+K+N        +VK++K  +KKQ V++  +  + VEDQQHLPSFLHDTASSHVFDFSTNN VGTNQQ Y  +MVDYSQGFSAT NYFEG+SSYQE+ FG+LQP LSKN++QGN WYGGK
Sbjct:    3 MSAFDSECSSGCESGWTLYLEHSYEDTRFIGGTEGYYGNQHKDKRVTNEYSEEGVEDLSMVSDASSGPP-HLPYDDDV-YFNEKDN--------VVKKHKKGTKKQKVRENKQHAIAVEDQQHLPSFLHDTASSHVFDFSTNNVVGTNQQNYVGNMVDYSQGFSATNNYFEGKSSYQEEKFGFLQPPLSKNDLQGNNWYGGK 194
[Close]
BLAST of rna-XM_004497210.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4WGD3|A0A9D4WGD3_PEA (Uncharacterized protein OS=Pisum sativum OX=3888 GN=KIW84_065770 PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 2.205e-69
Identity = 128/209 (61.24%), Postives = 155/209 (74.16%), Query Frame = 0 
Query:    1 MSAFDSECSSGCESGWTLYLEHSFG---------GGYYGEHKDKIVTNDYSEGVEDLSMISDASSGPPQYLPFDDDAN-YFNQKNNACFYSESNLVKQN-KSASKKQNVKDKNKQQLQVEDQQHLPSFLHDTASSHVFDFSTNNDVGTNQQTYKESMVDYSQGFSATNYFEGRSSYQEQHFGYLQPSLSKNEIQGNK-WYG-GKGMGMR 196
            MSAFDSECSSGCESGWTLYLEHS+G          GYYG++KDK V  +     +DLSM+SDASSGPP ++P+D+D N +FN+K+N      ++LVKQN KS +KKQ V++  +     EDQQ+LPSFLHDTASSHVFDFSTNN + TNQQ       +YSQG+SATNYFEGRSSYQE+ FG+LQ S S+NE+Q NK WYG  KG GMR
Sbjct:    3 MSAFDSECSSGCESGWTLYLEHSYGENTRFIDGTQGYYGKYKDKRVITNGENYSQDLSMVSDASSGPP-HVPYDNDDNGHFNEKHNG-----NSLVKQNNKSETKKQKVREHVE-----EDQQNLPSFLHDTASSHVFDFSTNNVIETNQQ-------NYSQGYSATNYFEGRSSYQEEQFGFLQQSQSENELQSNKRWYGRKKGFGMR 193
[Close]
BLAST of rna-XM_004497210.3 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8MDD5|A0A8B8MDD5_ABRPR (Uncharacterized protein LOC113872468 OS=Abrus precatorius OX=3816 GN=LOC113872468 PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 9.025e-66
Identity = 125/207 (60.39%), Postives = 143/207 (69.08%), Query Frame = 0 
Query:    1 MSAFDSECSSGCESGWTLYLEHSF-------------GG--GYYGE-HKDKIVTNDYSEGVEDLSMISDASSGPPQYLPFDDDANYFNQKNNACFYSESNLVKQNKSASKKQNVKDKNKQQLQVEDQQHLPSFLHDTASSHVFDFST----NNDVGTNQQTYKESMVDYSQGFSATNYFEGRSSYQEQHFGYLQPSLSKNEIQGNKW 187
            M+AF SECSSGCESGWTLYLEHSF             GG  G+Y E HKDK V ++ S   EDLSMISDASSGPP    F DD  YFN++ N CFYS S  VK  KS +K+Q VK     +      QHLPSFLHDTASSHVF+FS     NN  G+N QT   SM+DYSQGFSAT YFEGRSS+QE+HFG+LQ SLS+NE+QG+KW
Sbjct:    1 MNAFASECSSGCESGWTLYLEHSFLNQNASHRDTRFIGGTEGFYEEEHKDKRVKDENSR-EEDLSMISDASSGPPH---FPDDEPYFNEEVNGCFYSASKAVKLPKSGTKRQRVKVNPHNE-----DQHLPSFLHDTASSHVFNFSPESFENNVTGSNPQTSIGSMLDYSQGFSAT-YFEGRSSFQEEHFGFLQSSLSENELQGDKW 197
[Close]
BLAST of rna-XM_004497210.3 vs. UniProtKB/TrEMBL
Match: tr|I1LED2|I1LED2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100798463 PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.714e-65
Identity = 124/205 (60.49%), Postives = 142/205 (69.27%), Query Frame = 0 
Query:    1 MSAFDSE-CSSGCESGWTLYLEHSF--------GGGYYGEHKDKIVTNDYSEGVEDLSMISDASSGPPQYLPFDDDANYFNQKNNACFYSESNLVKQNKSASKKQNVKDKNKQQLQVEDQQHLPSFLHDTASSHVFDFSTNNDVGTNQQTYKESMVDYSQGFSATNYFEGRSSYQEQHFGYLQPSLSKNEIQGNKWYGGKGMGMR 196
            M+ F SE CSSGCESGWTLYLE SF         G Y  EHKDK   +   E  EDLSM+SDASSGPP + P  D+ANYFN++ N CFYS S        +  K+    +N+Q L  EDQQHLPSFL+DTASS VFDFSTNN    NQQT   SM+DYSQGFSAT YFEGRSS+Q +HFG+LQ   S NE+QG KWYGGKGMG+R
Sbjct:    1 MNTFSSEICSSGCESGWTLYLEQSFLNQKAGGTEGSYEEEHKDKRFKD---EEEEDLSMVSDASSGPPHF-PDYDEANYFNEEVNGCFYSASKKAVMQAKSGTKKKKIKENQQHL--EDQQHLPSFLYDTASSPVFDFSTNNVNVANQQTSIGSMLDYSQGFSAT-YFEGRSSFQGEHFGFLQ---SGNELQGKKWYGGKGMGIR 195
[Close]
BLAST of rna-XM_004497210.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2QU52|A0A0B2QU52_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_028132 PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.714e-65
Identity = 124/205 (60.49%), Postives = 142/205 (69.27%), Query Frame = 0 
Query:    1 MSAFDSE-CSSGCESGWTLYLEHSF--------GGGYYGEHKDKIVTNDYSEGVEDLSMISDASSGPPQYLPFDDDANYFNQKNNACFYSESNLVKQNKSASKKQNVKDKNKQQLQVEDQQHLPSFLHDTASSHVFDFSTNNDVGTNQQTYKESMVDYSQGFSATNYFEGRSSYQEQHFGYLQPSLSKNEIQGNKWYGGKGMGMR 196
            M+ F SE CSSGCESGWTLYLE SF         G Y  EHKDK   +   E  EDLSM+SDASSGPP + P  D+ANYFN++ N CFYS S        +  K+    +N+Q L  EDQQHLPSFL+DTASS VFDFSTNN    NQQT   SM+DYSQGFSAT YFEGRSS+Q +HFG+LQ   S NE+QG KWYGGKGMG+R
Sbjct:    1 MNTFSSEICSSGCESGWTLYLEQSFLNQKAGGTEGSYEEEHKDKRFKD---EEEEDLSMVSDASSGPPHF-PDYDEANYFNEEVNGCFYSASKKAVMQAKSGTKKKKIKENQQHL--EDQQHLPSFLYDTASSPVFDFSTNNVNVANQQTSIGSMLDYSQGFSAT-YFEGRSSFQGEHFGFLQ---SGNELQGKKWYGGKGMGIR 195
[Close]
BLAST of rna-XM_004497210.3 vs. UniProtKB/TrEMBL
Match: tr|A0A151U7I7|A0A151U7I7_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_007970 PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 3.110e-64
Identity = 119/204 (58.33%), Postives = 139/204 (68.14%), Query Frame = 0 
Query:    1 MSAFDSECSSGCESGWTLYLEHSF--------GGGYYGEHKDKIVTNDYSEGVEDLSMISDASSGPPQYLPFDDDANYFNQKNNACFYSESNLVKQNKSASKKQNVKDKNKQQLQVEDQQHLPSFLHDTASSHVFDFSTNNDVGTNQQTYKESMVDYSQGFSATNYFEGRSSYQEQHFGYLQPSLSKNEIQGNKWYGGKGMGMR 196
            M+ F SECSSGCESGWTLYLE SF         G    EHKDK   ++ S G EDLSM+SDASSGPP +  ++    YFN++ N  FYS S  VK  K+ +KKQ VK+           QHLPS LHDTASS  FDFSTNN  G  QQT   S++DYSQGFSAT YFEG SS+QEQHFG+LQ   S+NE++GNKWYGGKGMG+R
Sbjct:    1 MNTFGSECSSGCESGWTLYLERSFLNQNASSHRGATEEEHKDKRFKHEDS-GEEDLSMLSDASSGPPHFPHYEA---YFNEEVNGSFYSASKAVKLAKNGTKKQKVKE----------NQHLPSILHDTASSPFFDFSTNNITGGKQQTSTGSVLDYSQGFSAT-YFEGGSSFQEQHFGFLQ---SENELEGNKWYGGKGMGIR 186
[Close]
BLAST of rna-XM_004497210.3 vs. UniProtKB/TrEMBL
Match: tr|A0A371FKJ4|A0A371FKJ4_MUCPR (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_40952 PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 5.321e-64
Identity = 127/224 (56.70%), Postives = 147/224 (65.62%), Query Frame = 0 
Query:    1 MSAFDSECSSGCESGWTLYLEHSF-------------GGGYYGEHKDKIVTNDYSEGVEDLSMISDASSGPPQYLPFDDDANYFN-QKNNACFYSESNLVKQNKSASKKQNVKDKNKQQLQVEDQQHLPSFLHDTASSHVFDFSTN-------------NDV-GTNQQTYKESMVDYSQGFSATNYFEGRSSYQEQHFGYLQPSLSKNEIQGNKWYGGKGMGMR 196
            M+ FDSECSSGCESGWTLYLEHSF             G  Y  EHK K   ++ S G EDLSM+SDASSGPP +        YFN Q NN CFYS S  VK  KS +K+          L+V++ QHLPSFLHDTASS VFDFSTN             N+V G NQQT   S++DYSQGFSAT YFEGRSS+QE+HFG+LQ   S+NE++GNKWYGGKGMG+R
Sbjct:    1 MNTFDSECSSGCESGWTLYLEHSFLDQNASSHRGGTEGFNYEEEHKGKRFKDEDS-GEEDLSMVSDASSGPPHH------EAYFNEQVNNGCFYSASKAVKLAKSDTKR----------LKVQENQHLPSFLHDTASSPVFDFSTNVFVCYSWFLTKFQNNVNGANQQTSTGSVLDYSQGFSAT-YFEGRSSFQEEHFGFLQ---SENELEGNKWYGGKGMGIR 203
The following BLAST results are available for this feature:
BLAST of rna-XM_004497210.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11)
Total hits: 2
Match NameE-valueIdentityDescription
|5.309e-1937.30Symbols: no symbol available | no full name availa... [more]
|5.309e-1937.30Symbols: no symbol available | no full name availa... [more]
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BLAST of rna-XM_004497210.3 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
sp|Q8L9K4|SOFL5_ARATH5.119e-1837.30Protein SOB FIVE-LIKE 5 OS=Arabidopsis thaliana OX... [more]
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BLAST of rna-XM_004497210.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2Y097|A0A1S2Y097_CICAR2.566e-147100.00Uncharacterized protein LOC101498843 isoform X1 OS... [more]
tr|A0A1S3E5B2|A0A1S3E5B2_CICAR7.677e-114100.00Uncharacterized protein LOC101498843 isoform X2 OS... [more]
tr|A0A2K3PM98|A0A2K3PM98_TRIPR9.089e-9172.36Uncharacterized protein OS=Trifolium pratense OX=5... [more]
tr|A0A072VQE3|A0A072VQE3_MEDTR4.397e-8270.30Uncharacterized protein OS=Medicago truncatula OX=... [more]
tr|A0A9D4WGD3|A0A9D4WGD3_PEA2.205e-6961.24Uncharacterized protein OS=Pisum sativum OX=3888 G... [more]
tr|A0A8B8MDD5|A0A8B8MDD5_ABRPR9.025e-6660.39Uncharacterized protein LOC113872468 OS=Abrus prec... [more]
tr|I1LED2|I1LED2_SOYBN1.714e-6560.49Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A0B2QU52|A0A0B2QU52_GLYSO1.714e-6560.49Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|A0A151U7I7|A0A151U7I7_CAJCA3.110e-6458.33Uncharacterized protein OS=Cajanus cajan OX=3821 G... [more]
tr|A0A371FKJ4|A0A371FKJ4_MUCPR5.321e-6456.70Uncharacterized protein (Fragment) OS=Mucuna pruri... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR044670SOB-five-likePANTHERPTHR33347OSJNBA0091C07.3 PROTEINcoord: 4..183

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_004497210.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004497210.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004497210.3; organism=Cicer arietinum; type=mRNA; length=603bp
ATGAGTGCATTTGATTCAGAATGTAGTAGTGGATGTGAGTCAGGTTGGAC
TCTATACCTTGAACACTCTTTTGGAGGAGGGTATTATGGGGAACACAAAG
ATAAAATAGTCACAAATGACTATTCTGAAGGTGTTGAAGATTTGTCTATG
ATTTCTGATGCTTCTTCTGGACCTCCACAATATCTTCCATTTGATGATGA
TGCTAATTACTTCAATCAAAAAAACAATGCTTGCTTTTATTCAGAATCCA
ACTTAGTGAAACAGAACAAGAGTGCTTCAAAGAAACAGAATGTTAAAGAC
AAAAATAAACAACAACTTCAAGTTGAAGATCAACAACATCTTCCTTCTTT
TCTTCATGATACTGCTAGCTCTCATGTCTTTGACTTTTCCACTAACAATG
ATGTTGGGACAAATCAACAAACGTATAAAGAGAGTATGGTAGATTATTCA
CAAGGTTTTTCAGCAACTAATTATTTTGAGGGAAGATCCTCATATCAAGA
ACAACACTTTGGTTATTTACAACCATCTTTATCGAAAAATGAAATTCAAG
GCAACAAATGGTATGGAGGGAAAGGAATGGGAATGAGGGGAAGAAGATGT
TAG
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protein sequence of rna-XM_004497210.3_CaCDCfrontier-NCBI_v1

>rna-XM_004497210.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004497210.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004497210.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=200bp
MSAFDSECSSGCESGWTLYLEHSFGGGYYGEHKDKIVTNDYSEGVEDLSM
ISDASSGPPQYLPFDDDANYFNQKNNACFYSESNLVKQNKSASKKQNVKD
KNKQQLQVEDQQHLPSFLHDTASSHVFDFSTNNDVGTNQQTYKESMVDYS
QGFSATNYFEGRSSYQEQHFGYLQPSLSKNEIQGNKWYGGKGMGMRGRRC
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mRNA from alignment at chr4:14478903..14480268-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_004497210.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004497210.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004497210.3; organism=Cicer arietinum; type=mRNA; length=1366bp; location=Sequence derived from: chr4:14478903..14480268- (Cicer arietinum
CGATTGTTTTGATGGTTTAACTGGACTGAACCCACATTGCTACAAAACAC
AAACAACCTTAATAAAATGTTCCATTGTTTTCACCCTTTTACATCTACCT
AGTAGTCTTTCTTTTCTTTCATCATATACACTAGAAAGTAGAATCTAGAA
AAGAAAACATGAGTGCATTTGATTCAGAATGTAGTAGTGGATGTGAGTCA
GGTTGGACTCTATACCTTGAACACTCTTTTGGAGGAGGGTATTATGGGGA
ACACAAAGATAAAATAGTCACAAATGACTATTCTGAAGGTGTTGAAGATT
TGTCTATGATTTCTGATGCTTCTTCTGGACCTCCACAATATCTTCCATTT
GATGATGATGCTAATTACTTCAATCAAAAAAACAATGCTTGCTTTTATTC
AGAATCCAACTTAGTGAAACAGAACAAGAGTGCTTCAAAGAAACAGAATG
TTAAAGACAAAAATAAACAACAACTTCAAGTTGAAGATCAACAACATCTT
CCTTCTTTTCTTCATGATACTGCTAGCTCTCATGTCTTTGACTTTTCCAC
TGTAAGTTTGTTTCAGATGTTAAATATTTATTTTGTTACGTTGTAAATAT
TCATAACAAACCATTTAAATTAAATTAATTTTTTTTAAAGAAAACATGAA
TTGTATGAAATGTGTTTGTTGACAATTTTTCAGAACAATGATGTTGGGAC
AAATCAACAAACGTATAAAGAGAGTATGGTAGATTATTCACAAGGTTTTT
CAGCAACTAATTATTTTGAGGTAATTATCTTGATTCTGTTCTTTTGATTT
TACTATTTTACATTTGATTTTTGTAATAGCTAAAATAATTTATGTTATTT
GTAGGGAAGATCCTCATATCAAGAACAACACTTTGGTTATTTACAACCAT
CTTTATCGAAAAATGAAATTCAAGGCAACAAGTAAGTTAATCTTCTTTTG
AATTTCCAAAAAGAAAAAGTTAATCTTCTTTTGTGCATTGTTATAATTTT
TTTTTAATGTGTTATGTTGAATGATTTTCAATTTTTTTTTAACAGATGGT
ATGGAGGGAAAGGAATGGGAATGAGGGGAAGAAGATGTTAGTTTTATTAA
TGGCTGCCTCTGCTATTGAAGATGTTGCAGTGGAATTATTCAAGATTAAT
GGAAAGAGAGTTATTATGGTGTAAAAGGAATTTAATGCTTCTTTTTCTCT
TTTTACTTTTGTCAATGCAATGGGAAACAACCTGAAAGGGCATGTTAGTC
ATTTTATTTTTTTTTGCTTTACAAAATTTTATTTTCTTGTTAGTGAATCA
CGATTAGAAGCTAAATTAGTAAGTTAGATTTTGTATAAGTATGTTAACTA
CTCCTTGTTATTTTGA
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Coding sequence (CDS) from alignment at chr4:14478903..14480268-

>rna-XM_004497210.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004497210.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004497210.3; organism=Cicer arietinum; type=CDS; length=603bp; location=Sequence derived from: chr4:14478903..14480268- (Cicer arietinum
ATGAGTGCATTTGATTCAGAATGTAGTAGTGGATGTGAGTCAGGTTGGAC
TCTATACCTTGAACACTCTTTTGGAGGAGGGTATTATGGGGAACACAAAG
ATAAAATAGTCACAAATGACTATTCTGAAGGTGTTGAAGATTTGTCTATG
ATTTCTGATGCTTCTTCTGGACCTCCACAATATCTTCCATTTGATGATGA
TGCTAATTACTTCAATCAAAAAAACAATGCTTGCTTTTATTCAGAATCCA
ACTTAGTGAAACAGAACAAGAGTGCTTCAAAGAAACAGAATGTTAAAGAC
AAAAATAAACAACAACTTCAAGTTGAAGATCAACAACATCTTCCTTCTTT
TCTTCATGATACTGCTAGCTCTCATGTCTTTGACTTTTCCACTAACAATG
ATGTTGGGACAAATCAACAAACGTATAAAGAGAGTATGGTAGATTATTCA
CAAGGTTTTTCAGCAACTAATTATTTTGAGGGAAGATCCTCATATCAAGA
ACAACACTTTGGTTATTTACAACCATCTTTATCGAAAAATGAAATTCAAG
GCAACAAATGGTATGGAGGGAAAGGAATGGGAATGAGGGGAAGAAGATGT
TAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR044670SOFL
Vocabulary: Biological Process
TermDefinition
GO:0009690cytokinin metabolic process
GO:0009691cytokinin biosynthetic process