rna-XM_004507827.3
Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_004507827.3 vs. Araport11
Match: | (Symbols: RID2 | root initiation defective 2 | chr5:23204533-23206485 FORWARD LENGTH=289) HSP 1 Score: 443.736 bits (1140), Expect = 1.359e-158 Identity = 214/293 (73.04%), Postives = 251/293 (85.67%), Query Frame = 0 Query: 1 MGSRPELVAPPEIFYDDTEARKYTSSSRIIEIQASLSERALELLALPEDDVPKLLLDIGCGSGLSGETISENGHHWIGLDISPSMLNIALEREVEGDLLLSDMGQGLGLRPGVIDGAISISAVQWLCNADRSSHNPRLRLKAFFTSLYKCLSSGAKAVFQLYPQNVAQRELILNAAMNAGFGGGIVVDFPHSSKKRKEFLVLACGQQSMNSSLTIGKTEDEKGFSDHDDEDEDEENHTVCFSDRHRRPFKKQKNNKNGKGREWILRKKEQMRRRGNDVPLDTKYTGRKRKGRF 293 M +RPEL+APPEIFYDDTEARKYTSSSRI+EIQA LSERALELLALPED VP+ LLDIGCGSGLSGET+SE+GHHWIGLDIS SML++A+EREVEGDLLL DMGQGLGLR GVIDGAISISAVQWLCNAD+SSH PRLRLKAFF SLY+CLS GA+AVFQ+YP+N+AQRELIL A+ AGFGGG+VVD+PHS+KKRKEFLVL CG ++ +S+ K E ++ S+ DD +DEE+ V SDR+ RP K+Q+ N KGREW+LRKKEQ RR+G +VP D+K+T RKR+ RF Sbjct: 1 MSNRPELLAPPEIFYDDTEARKYTSSSRIVEIQAKLSERALELLALPEDGVPRFLLDIGCGSGLSGETLSEDGHHWIGLDISASMLHVAVEREVEGDLLLGDMGQGLGLRSGVIDGAISISAVQWLCNADKSSHEPRLRLKAFFGSLYRCLSRGARAVFQVYPENIAQRELILRQALQAGFGGGLVVDYPHSTKKRKEFLVLTCG--TVQTSIQTSKNEYDESCSE-DDNSDDEESEEVGVSDRN-RPRKRQRTNTKVKGREWVLRKKEQSRRKGKNVPADSKFTSRKRRTRF 289
BLAST of rna-XM_004507827.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LVD0|RID2_ARATH (18S rRNA (guanine-N(7))-methyltransferase RID2 OS=Arabidopsis thaliana OX=3702 GN=RID2 PE=1 SV=1) HSP 1 Score: 443.736 bits (1140), Expect = 1.293e-157 Identity = 214/293 (73.04%), Postives = 251/293 (85.67%), Query Frame = 0 Query: 1 MGSRPELVAPPEIFYDDTEARKYTSSSRIIEIQASLSERALELLALPEDDVPKLLLDIGCGSGLSGETISENGHHWIGLDISPSMLNIALEREVEGDLLLSDMGQGLGLRPGVIDGAISISAVQWLCNADRSSHNPRLRLKAFFTSLYKCLSSGAKAVFQLYPQNVAQRELILNAAMNAGFGGGIVVDFPHSSKKRKEFLVLACGQQSMNSSLTIGKTEDEKGFSDHDDEDEDEENHTVCFSDRHRRPFKKQKNNKNGKGREWILRKKEQMRRRGNDVPLDTKYTGRKRKGRF 293 M +RPEL+APPEIFYDDTEARKYTSSSRI+EIQA LSERALELLALPED VP+ LLDIGCGSGLSGET+SE+GHHWIGLDIS SML++A+EREVEGDLLL DMGQGLGLR GVIDGAISISAVQWLCNAD+SSH PRLRLKAFF SLY+CLS GA+AVFQ+YP+N+AQRELIL A+ AGFGGG+VVD+PHS+KKRKEFLVL CG ++ +S+ K E ++ S+ DD +DEE+ V SDR+ RP K+Q+ N KGREW+LRKKEQ RR+G +VP D+K+T RKR+ RF Sbjct: 1 MSNRPELLAPPEIFYDDTEARKYTSSSRIVEIQAKLSERALELLALPEDGVPRFLLDIGCGSGLSGETLSEDGHHWIGLDISASMLHVAVEREVEGDLLLGDMGQGLGLRSGVIDGAISISAVQWLCNADKSSHEPRLRLKAFFGSLYRCLSRGARAVFQVYPENIAQRELILRQALQAGFGGGLVVDYPHSTKKRKEFLVLTCG--TVQTSIQTSKNEYDESCSE-DDNSDDEESEEVGVSDRN-RPRKRQRTNTKVKGREWVLRKKEQSRRKGKNVPADSKFTSRKRRTRF 289
BLAST of rna-XM_004507827.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9CY21|BUD23_MOUSE (Probable 18S rRNA (guanine-N(7))-methyltransferase OS=Mus musculus OX=10090 GN=Bud23 PE=1 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 8.105e-106 Identity = 161/290 (55.52%), Postives = 201/290 (69.31%), Query Frame = 0 Query: 4 RPELVAPPEIFYDDTEARKYTSSSRIIEIQASLSERALELLALPEDDVPKLLLDIGCGSGLSGETISENGHHWIGLDISPSMLNIALEREVEGDLLLSDMGQGLGLRPGVIDGAISISAVQWLCNADRSSHNPRLRLKAFFTSLYKCLSSGAKAVFQLYPQNVAQRELILNAAMNAGFGGGIVVDFPHSSKKRKEFLVLACGQQSMNSSLTIGKTEDEKGFSDHDDEDEDEENHTVCFSDRHRRPFKKQKNNKNGKGREWILRKKEQMRRRGNDVPLDTKYTGRKRKGRF 293 RPE PPE+FYD EARKY +SR+I+IQ ++ERALELL LPE P LLDIGCGSGLSG+ ISE GH+W+G+DISP+ML+ AL+R+ EGDLLL DMGQG+ RPG DG ISISAVQWLCNA++ S P RL FF+SLY L GA+AV QLYP+N Q ELI A AGF GG+VVDFP+S+K +K +L L G ++SL G TE +D D+ + ++ S+R P KK + + K REW+L KKE+ RR+G +V DT+YTGRKRK RF Sbjct: 7 RPEHSGPPELFYDQNEARKYVRNSRMIDIQTKMTERALELLCLPEGQ-PSYLLDIGCGSGLSGDYISEEGHYWVGIDISPAMLDAALDRDTEGDLLLGDMGQGVPFRPGSFDGCISISAVQWLCNANKKSDVPARRLYCFFSSLYSALVRGARAVLQLYPENSEQLELITTQATRAGFTGGVVVDFPNSAKAKKFYLCLFSGP---STSLPKGLTE---------SQDADQASESMFTSERA--PHKKARRDLVKKSREWVLEKKERRRRQGKEVRPDTQYTGRKRKPRF 281
BLAST of rna-XM_004507827.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q55DA6|BUD23_DICDI (Probable 18S rRNA (guanine-N(7))-methyltransferase OS=Dictyostelium discoideum OX=44689 GN=DDB_G0269722 PE=3 SV=1) HSP 1 Score: 303.138 bits (775), Expect = 4.527e-102 Identity = 149/293 (50.85%), Postives = 206/293 (70.31%), Query Frame = 0 Query: 3 SRPELVAPPEIFYDDTEARKYTSSSRIIEIQASLSERALELLALPEDDVPKLLLDIGCGSGLSGETISENGHHWIGLDISPSMLNIALEREVEGDLLLSDMGQGLGLRPGVIDGAISISAVQWLCNADRSSHNPRLRLKAFFTSLYKCLSSGAKAVFQLYPQNVAQRELILNAAMNAGFGGGIVVDFPHSSKKRKEFLVLACGQQSMNSSLTIGKTEDEKGFSDHDDEDEDEENHTVCFSDRH--RRPFKKQKNNKNGKGREWILRKKEQMRRRGNDVPLDTKYTGRKRKGRF 293 SRPE +APPEIFYDD E++KY+S+SRIIEIQ ++ERA ELLA+PE +LLDIGCGSG+SG+ I++ GH+WIG DIS ML++A++REVEGD++L D+GQG R G D AISISA+QWLCNA++S HNPR RL FF SL+ L+ G KA+ Q YP+N AQ E+I +A+ GF GG+++DFP+SSK +K FLVL G ++ S G +E + +D +E V +S+R RR K K + K +EWI+ KK++ R++G ++ D+K++GRKR +F Sbjct: 2 SRPEHIAPPEIFYDDVESKKYSSNSRIIEIQTKMAERAYELLAIPETAEGLMLLDIGCGSGISGDVITDAGHYWIGCDISQHMLDVAIDREVEGDVMLRDIGQGFPFRAGSFDAAISISAIQWLCNAEKSHHNPRKRLHTFFQSLFNVLTRGGKAILQFYPENSAQIEMITASALRCGFSGGLLIDFPNSSKAKKYFLVLFTGNNNIMPSAK-GVEGEEYEQQEEEDSNE------VKYSNRKRDRRRVTKSKGSAQHKTKEWIMNKKDRQRKQGREIKNDSKFSGRKRGPKF 287
BLAST of rna-XM_004507827.3 vs. UniProtKB/Swiss-Prot
Match: sp|O43709|BUD23_HUMAN (Probable 18S rRNA (guanine-N(7))-methyltransferase OS=Homo sapiens OX=9606 GN=BUD23 PE=1 SV=2) HSP 1 Score: 300.827 bits (769), Expect = 2.818e-101 Identity = 153/292 (52.40%), Postives = 199/292 (68.15%), Query Frame = 0 Query: 2 GSRPELVAPPEIFYDDTEARKYTSSSRIIEIQASLSERALELLALPEDDVPKLLLDIGCGSGLSGETISENGHHWIGLDISPSMLNIALEREVEGDLLLSDMGQGLGLRPGVIDGAISISAVQWLCNADRSSHNPRLRLKAFFTSLYKCLSSGAKAVFQLYPQNVAQRELILNAAMNAGFGGGIVVDFPHSSKKRKEFLVLACGQQSMNSSLTIGKTEDEKGFSDHDDEDEDEENHTVCFSDRHRRPFKKQKNNKNGKGREWILRKKEQMRRRGNDVPLDTKYTGRKRKGRF 293 G RPE PPE+FYD+TEARKY +SR+I+IQ ++ RALELL LPE+ P LLDIGCG+GLSG +S+ GH+W+GLDISP+ML+ A++RE+EGDLLL DMGQG+ +PG DG ISISAVQWLCNA++ S NP RL FF SL+ L G++AV QLYP+N Q ELI A AGF GG+VVD+P+S+K +K +L L G + +G S++ DE E E+ F++ R P + + K R W+L KKE+ RR+G +V DT+YTGRKRK RF Sbjct: 5 GRRPEHGGPPELFYDETEARKYVRNSRMIDIQTRMAGRALELLYLPENK-PCYLLDIGCGTGLSGSYLSDEGHYWVGLDISPAMLDEAVDREIEGDLLLGDMGQGIPFKPGTFDGCISISAVQWLCNANKKSENPAKRLYCFFASLFSVLVRGSRAVLQLYPENSEQLELITTQATKAGFSGGMVVDYPNSAKAKKFYLCLFSGPSTFIP----------EGLSENQDEVEPRES---VFTN-ERFPLRMSRRGMVRKSRAWVLEKKERHRRQGREVRPDTQYTGRKRKPRF 281
BLAST of rna-XM_004507827.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q58DP0|BUD23_BOVIN (Probable 18S rRNA (guanine-N(7))-methyltransferase OS=Bos taurus OX=9913 GN=BUD23 PE=2 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 1.282e-97 Identity = 147/292 (50.34%), Postives = 196/292 (67.12%), Query Frame = 0 Query: 2 GSRPELVAPPEIFYDDTEARKYTSSSRIIEIQASLSERALELLALPEDDVPKLLLDIGCGSGLSGETISENGHHWIGLDISPSMLNIALEREVEGDLLLSDMGQGLGLRPGVIDGAISISAVQWLCNADRSSHNPRLRLKAFFTSLYKCLSSGAKAVFQLYPQNVAQRELILNAAMNAGFGGGIVVDFPHSSKKRKEFLVLACGQQSMNSSLTIGKTEDEKGFSDHDDEDEDEENHTVCFSDRHRRPFKKQKNNKNGKGREWILRKKEQMRRRGNDVPLDTKYTGRKRKGRF 293 G RPEL PPE++YD EARKY +SR+I++Q ++ RALELL +PED P +LDIGCG+GLSG+ +S+ GH+W+G+DISP+ML+ AL+RE +GD++L DMGQG+ +PG D ISISAVQWLCNA++ S P RL FF+SLY L G +AV QLYP+N Q ELI A AGF GG+VVD+P+S+K +K +L L G ++SL G +E D ++E E T R P++ + K REW+L KK + RR+G +V DT+YTGRKRK RF Sbjct: 5 GRRPELRGPPELYYDKNEARKYVRNSRMIDVQIKMTGRALELLCVPEDK-PCYVLDIGCGTGLSGDYLSDEGHYWVGIDISPAMLDEALDRETQGDVILGDMGQGIPFKPGTFDACISISAVQWLCNANKKSDIPAKRLYCFFSSLYSVLVRGGRAVLQLYPENSEQLELITTQATRAGFTGGVVVDYPNSAKAKKFYLCLFSGP---STSLPEGLSE------DTEEEKPAESTFTA-----DRIPYRIARRGVVRKSREWVLEKKARRRRQGKEVCPDTQYTGRKRKPRF 281
BLAST of rna-XM_004507827.3 vs. UniProtKB/Swiss-Prot
Match: sp|P25627|BUD23_YEAST (18S rRNA (guanine(1575)-N(7))-methyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=BUD23 PE=1 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 1.186e-86 Identity = 147/292 (50.34%), Postives = 184/292 (63.01%), Query Frame = 0 Query: 3 SRPELVAPPEIFYDDTEARKYTSSSRIIEIQASLSERALELLALPEDDVPKLLLDIGCGSGLSGETISENGHH-WIGLDISPSMLNIALEREVEGDLLLSDMGQGLGLRPGVIDGAISISAVQWLCNADRSSHNPRLRLKAFFTSLYKCLSSGAKAVFQLYPQNVAQRELILNAAMNAGFGGGIVVDFPHSSKKRKEFLVLACGQQSMNSSLTIGKTEDEKGFSDHDDEDEDEENHTVCFSDRHRRPFKKQKNNKNGKGREWILRKKEQMRRRGNDVPLDTKYTGRKRKGRF 293 SRPE +APPEIFY+D+EA KYT S+R+ IQA ++ RALELL L +LDIGCGSGLSGE +++ G H W GLDISPSML L RE+EGDL+L DMG G+ R G D AISISA+QWLCNAD S ++P+ RL FF +LY L G K V Q YP+N Q + IL +A AGF GG+VVD P S K +K +LVL+ G + D DEEN V + R+ K K+ ++ K +ILRKKE M+RRG V D+K+TGRKR+ RF Sbjct: 2 SRPEELAPPEIFYNDSEAHKYTGSTRVQHIQAKMTLRALELLNLQP---CSFILDIGCGSGLSGEILTQEGDHVWCGLDISPSMLATGLSRELEGDLMLQDMGTGIPFRAGSFDAAISISAIQWLCNADTSYNDPKQRLMRFFNTLYAALKKGGKFVAQFYPKNDDQVDDILQSAKVAGFSGGLVVDDPESKKNKKYYLVLSSGAPPQGEEQV-----------NLDGVTMDEEN--VNLKKQLRQRLKGGKDKESAK--SFILRKKELMKRRGRKVAKDSKFTGRKRRHRF 275
BLAST of rna-XM_004507827.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q10162|BUD23_SCHPO (18S rRNA (guanine-N(7))-methyltransferase bud23 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=bud23 PE=3 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 2.588e-83 Identity = 137/295 (46.44%), Postives = 194/295 (65.76%), Query Frame = 0 Query: 3 SRPELVAPPEIFYDDTEARKYTSSSRIIEIQASLSERALELLALPEDDVPKLLLDIGCGSGLSGETISENGHHWIGLDISPSMLNIALE-REVEGDLLLSDMGQGLGLRPGVIDGAISISAVQWLCNADRSSHNPRLRLKAFFTSLYKCLSSGAKAVFQLYPQNVAQRELILNAAMNAGFGGGIVVDFPHSSKKRKEFLVL-ACGQQSMN-SSLTIGKTEDEKGFSDHDDEDEDEENHTVCFSDRHRRPFKKQKNNKNGKGREWILRKKEQMRRRGN-DVPLDTKYTGRKRKGRF 293 SRPE +APPEIFY+D EA KY++++RI IQ +SERALELL + + P +LDIGCGSG+S + GH +G+DISPSML++ALE +E+EGDLLL DMG G+ RPG DG ISISA+QWL NAD++ + P+ RL FF +LY + G +AV Q YP+ +++I++ A AGF GGIVVD P S +++K +LVL A G ++++ SS+T+ D++G ++ +R KK+++ RE+I+ KKE R+RG VP D+KY+GR+RK F Sbjct: 2 SRPEHIAPPEIFYNDVEAGKYSTNTRIQSIQTEMSERALELL---DAEGPSFILDIGCGSGISTQIGESQGHVVVGMDISPSMLSVALESQEIEGDLLLCDMGTGVPFRPGTFDGVISISAIQWLLNADKTCNVPQRRLNRFFQTLYISMKRGGRAVMQYYPETEKSQQMIMDTARKAGFAGGIVVDHPESKRQKKYYLVLQAGGTRTLDISSMTL----DQEG------------------TNAKQRKLKKKQDMST---REYIIHKKELNRKRGRLHVPKDSKYSGRRRKAAF 268
BLAST of rna-XM_004507827.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YPE4|A0A1S2YPE4_CICAR (18S rRNA (Guanine-N(7))-methyltransferase RID2 OS=Cicer arietinum OX=3827 GN=LOC101504411 PE=3 SV=1) HSP 1 Score: 605.52 bits (1560), Expect = 0.000e+0 Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0 Query: 1 MGSRPELVAPPEIFYDDTEARKYTSSSRIIEIQASLSERALELLALPEDDVPKLLLDIGCGSGLSGETISENGHHWIGLDISPSMLNIALEREVEGDLLLSDMGQGLGLRPGVIDGAISISAVQWLCNADRSSHNPRLRLKAFFTSLYKCLSSGAKAVFQLYPQNVAQRELILNAAMNAGFGGGIVVDFPHSSKKRKEFLVLACGQQSMNSSLTIGKTEDEKGFSDHDDEDEDEENHTVCFSDRHRRPFKKQKNNKNGKGREWILRKKEQMRRRGNDVPLDTKYTGRKRKGRF 293 MGSRPELVAPPEIFYDDTEARKYTSSSRIIEIQASLSERALELLALPEDDVPKLLLDIGCGSGLSGETISENGHHWIGLDISPSMLNIALEREVEGDLLLSDMGQGLGLRPGVIDGAISISAVQWLCNADRSSHNPRLRLKAFFTSLYKCLSSGAKAVFQLYPQNVAQRELILNAAMNAGFGGGIVVDFPHSSKKRKEFLVLACGQQSMNSSLTIGKTEDEKGFSDHDDEDEDEENHTVCFSDRHRRPFKKQKNNKNGKGREWILRKKEQMRRRGNDVPLDTKYTGRKRKGRF Sbjct: 1 MGSRPELVAPPEIFYDDTEARKYTSSSRIIEIQASLSERALELLALPEDDVPKLLLDIGCGSGLSGETISENGHHWIGLDISPSMLNIALEREVEGDLLLSDMGQGLGLRPGVIDGAISISAVQWLCNADRSSHNPRLRLKAFFTSLYKCLSSGAKAVFQLYPQNVAQRELILNAAMNAGFGGGIVVDFPHSSKKRKEFLVLACGQQSMNSSLTIGKTEDEKGFSDHDDEDEDEENHTVCFSDRHRRPFKKQKNNKNGKGREWILRKKEQMRRRGNDVPLDTKYTGRKRKGRF 293
BLAST of rna-XM_004507827.3 vs. UniProtKB/TrEMBL
Match: tr|A0A834SSD5|A0A834SSD5_9FABA (Putative 18S rRNA (Guanine-N(7))-methyltransferase OS=Senna tora OX=362788 GN=G2W53_038833 PE=3 SV=1) HSP 1 Score: 510.76 bits (1314), Expect = 0.000e+0 Identity = 250/293 (85.32%), Postives = 269/293 (91.81%), Query Frame = 0 Query: 1 MGSRPELVAPPEIFYDDTEARKYTSSSRIIEIQASLSERALELLALPEDDVPKLLLDIGCGSGLSGETISENGHHWIGLDISPSMLNIALEREVEGDLLLSDMGQGLGLRPGVIDGAISISAVQWLCNADRSSHNPRLRLKAFFTSLYKCLSSGAKAVFQLYPQNVAQRELILNAAMNAGFGGGIVVDFPHSSKKRKEFLVLACGQQSMNSSLTIGKTEDEKGFSDHDDEDEDEENHTVCFSDRHRRPFKKQKNNKNGKGREWILRKKEQMRRRGNDVPLDTKYTGRKRKGRF 293 M SRPEL+APPE+FYDDTEARKYTSSSRIIEIQA LSERALELLALPEDDVPKLLLDIGCGSGLSGET++ENGHHWIGLDISPSMLNIA EREVEGDLLL DMGQGLGLRPGVIDGAISISAVQWLCNAD+SSHNPRLRLKAFFTSLY+CL++GA+AVFQLYP+N+ QRELILNAAM+AGF GGIVVDFPHSSK+RKEFLVL CGQ+S N+S+T GK ED G S DDE EDEEN TV SDRH RP KKQK+NK GKGREWI+RKKEQMRRRGNDVP +TKYTGRKRK RF Sbjct: 1 MASRPELLAPPEVFYDDTEARKYTSSSRIIEIQAMLSERALELLALPEDDVPKLLLDIGCGSGLSGETLTENGHHWIGLDISPSMLNIASEREVEGDLLLGDMGQGLGLRPGVIDGAISISAVQWLCNADKSSHNPRLRLKAFFTSLYRCLANGARAVFQLYPENLDQRELILNAAMHAGFAGGIVVDFPHSSKRRKEFLVLTCGQRSTNTSVTKGKGED--GESCSDDESEDEENKTVSISDRH-RPRKKQKHNKGGKGREWIMRKKEQMRRRGNDVPPNTKYTGRKRKDRF 290
BLAST of rna-XM_004507827.3 vs. UniProtKB/TrEMBL
Match: tr|C6TI19|C6TI19_SOYBN (18S rRNA (guanine(1575)-N(7))-methyltransferase Bud23 C-terminal domain-containing protein OS=Glycine max OX=3847 GN=100801198 PE=2 SV=1) HSP 1 Score: 503.827 bits (1296), Expect = 1.277e-178 Identity = 242/293 (82.59%), Postives = 267/293 (91.13%), Query Frame = 0 Query: 1 MGSRPELVAPPEIFYDDTEARKYTSSSRIIEIQASLSERALELLALPEDDVPKLLLDIGCGSGLSGETISENGHHWIGLDISPSMLNIALEREVEGDLLLSDMGQGLGLRPGVIDGAISISAVQWLCNADRSSHNPRLRLKAFFTSLYKCLSSGAKAVFQLYPQNVAQRELILNAAMNAGFGGGIVVDFPHSSKKRKEFLVLACGQQSMNSSLTIGKTEDEKGFSDHDDEDEDEENHTVCFSDRHRRPFKKQKNNKNGKGREWILRKKEQMRRRGNDVPLDTKYTGRKRKGRF 293 M SRPE+VAPPEIFYDD EARKYTSSSRI++IQA+LSERALELLALP+D VPKLLLDIGCGSGLSGET+SENGHHWIGLDIS SMLN+A+EREVEGDLLL DMGQGLG+RPGVIDGAISISAVQWLCNAD+SSHNPRLRLKAFFTSLYKCLS+GA+AVFQ+YP+N+ QRELILNAAM+AGF GGIVVDFPHSSKKRKEFLVL CGQ+S+N S++ GK ED + SD D EDEE TVC SDRH RP KKQKNNK+GKG+EW+LRKKEQMRRRGN VP +TKYTGRKRK RF Sbjct: 1 MASRPEVVAPPEIFYDDAEARKYTSSSRIVQIQATLSERALELLALPDDSVPKLLLDIGCGSGLSGETLSENGHHWIGLDISASMLNVAVEREVEGDLLLGDMGQGLGIRPGVIDGAISISAVQWLCNADKSSHNPRLRLKAFFTSLYKCLSNGARAVFQVYPENIDQRELILNAAMHAGFAGGIVVDFPHSSKKRKEFLVLTCGQRSVNVSISKGKNEDRESCSDED--SEDEEKQTVCISDRH-RPRKKQKNNKSGKGKEWLLRKKEQMRRRGNVVPPNTKYTGRKRKDRF 290
BLAST of rna-XM_004507827.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2QMP7|A0A0B2QMP7_GLYSO (18S rRNA (Guanine-N(7))-methyltransferase RID2 isoform A OS=Glycine soja OX=3848 GN=D0Y65_036243 PE=3 SV=1) HSP 1 Score: 503.827 bits (1296), Expect = 1.277e-178 Identity = 242/293 (82.59%), Postives = 267/293 (91.13%), Query Frame = 0 Query: 1 MGSRPELVAPPEIFYDDTEARKYTSSSRIIEIQASLSERALELLALPEDDVPKLLLDIGCGSGLSGETISENGHHWIGLDISPSMLNIALEREVEGDLLLSDMGQGLGLRPGVIDGAISISAVQWLCNADRSSHNPRLRLKAFFTSLYKCLSSGAKAVFQLYPQNVAQRELILNAAMNAGFGGGIVVDFPHSSKKRKEFLVLACGQQSMNSSLTIGKTEDEKGFSDHDDEDEDEENHTVCFSDRHRRPFKKQKNNKNGKGREWILRKKEQMRRRGNDVPLDTKYTGRKRKGRF 293 M SRPE+VAPPEIFYDD EARKYTSSSRI++IQA+LSERALELLALP+D VPKLLLDIGCGSGLSGET+SENGHHWIGLDIS SMLN+A+EREVEGDLLL DMGQGLG+RPGVIDGAISISAVQWLCNAD+SSHNPRLRLKAFFTSLYKCLS+GA+AVFQ+YP+N+ QRELILNAAM+AGF GGIVVDFPHSSKKRKEFLVL CGQ+S+N S++ GK ED + SD D EDEE TVC SDRH RP KKQKNNK+GKG+EW+LRKKEQMRRRGN VP +TKYTGRKRK RF Sbjct: 1 MASRPEVVAPPEIFYDDAEARKYTSSSRIVQIQATLSERALELLALPDDSVPKLLLDIGCGSGLSGETLSENGHHWIGLDISASMLNVAVEREVEGDLLLGDMGQGLGIRPGVIDGAISISAVQWLCNADKSSHNPRLRLKAFFTSLYKCLSNGARAVFQVYPENIDQRELILNAAMHAGFAGGIVVDFPHSSKKRKEFLVLTCGQRSVNVSISKGKNEDRESCSDED--SEDEEKQTVCISDRH-RPRKKQKNNKSGKGKEWLLRKKEQMRRRGNVVPPNTKYTGRKRKDRF 290
BLAST of rna-XM_004507827.3 vs. UniProtKB/TrEMBL
Match: tr|A0A445G2N6|A0A445G2N6_GLYSO (18S rRNA (Guanine-N(7))-methyltransferase RID2 OS=Glycine soja OX=3848 GN=D0Y65_045024 PE=3 SV=1) HSP 1 Score: 502.286 bits (1292), Expect = 5.369e-178 Identity = 242/293 (82.59%), Postives = 268/293 (91.47%), Query Frame = 0 Query: 1 MGSRPELVAPPEIFYDDTEARKYTSSSRIIEIQASLSERALELLALPEDDVPKLLLDIGCGSGLSGETISENGHHWIGLDISPSMLNIALEREVEGDLLLSDMGQGLGLRPGVIDGAISISAVQWLCNADRSSHNPRLRLKAFFTSLYKCLSSGAKAVFQLYPQNVAQRELILNAAMNAGFGGGIVVDFPHSSKKRKEFLVLACGQQSMNSSLTIGKTEDEKGFSDHDDEDEDEENHTVCFSDRHRRPFKKQKNNKNGKGREWILRKKEQMRRRGNDVPLDTKYTGRKRKGRF 293 M SRPE++APPEIFYDD EARKYTSSSRI++IQA+LSERALELLALP+D VPKLLLDIGCGSGLSGETISENGHHWIGLDIS SMLN+A+EREVEGDLLL DMGQG+G+RPGV+DGAISISAVQWLCNAD+SSHNPRLRLKAFFTSLYKCLS+GA+AVFQ+YP+N+ QRELILNAAM+AGF GGIVVDFPHSSKKRKEFLVL CGQ S+N+S++ GK ED G S DD+ EDEEN TVC SDRH RP KKQKNNK GKG+EW+LRKKEQMRRRGN VP +TKYTGRKRK RF Sbjct: 1 MASRPEVIAPPEIFYDDAEARKYTSSSRIVQIQATLSERALELLALPDDGVPKLLLDIGCGSGLSGETISENGHHWIGLDISASMLNVAVEREVEGDLLLGDMGQGIGIRPGVMDGAISISAVQWLCNADKSSHNPRLRLKAFFTSLYKCLSNGARAVFQVYPENIDQRELILNAAMHAGFAGGIVVDFPHSSKKRKEFLVLTCGQCSVNASISKGKNED--GESCSDDDSEDEENQTVCISDRH-RPRKKQKNNKVGKGKEWLLRKKEQMRRRGNVVPPNTKYTGRKRKDRF 290
BLAST of rna-XM_004507827.3 vs. UniProtKB/TrEMBL
Match: tr|I1MSN5|I1MSN5_SOYBN (18S rRNA (guanine(1575)-N(7))-methyltransferase Bud23 C-terminal domain-containing protein OS=Glycine max OX=3847 GN=100792606 PE=3 SV=1) HSP 1 Score: 502.286 bits (1292), Expect = 5.369e-178 Identity = 242/293 (82.59%), Postives = 268/293 (91.47%), Query Frame = 0 Query: 1 MGSRPELVAPPEIFYDDTEARKYTSSSRIIEIQASLSERALELLALPEDDVPKLLLDIGCGSGLSGETISENGHHWIGLDISPSMLNIALEREVEGDLLLSDMGQGLGLRPGVIDGAISISAVQWLCNADRSSHNPRLRLKAFFTSLYKCLSSGAKAVFQLYPQNVAQRELILNAAMNAGFGGGIVVDFPHSSKKRKEFLVLACGQQSMNSSLTIGKTEDEKGFSDHDDEDEDEENHTVCFSDRHRRPFKKQKNNKNGKGREWILRKKEQMRRRGNDVPLDTKYTGRKRKGRF 293 M SRPE++APPEIFYDD EARKYTSSSRI++IQA+LSERALELLALP+D VPKLLLDIGCGSGLSGETISENGHHWIGLDIS SMLN+A+EREVEGDLLL DMGQG+G+RPGV+DGAISISAVQWLCNAD+SSHNPRLRLKAFFTSLYKCLS+GA+AVFQ+YP+N+ QRELILNAAM+AGF GGIVVDFPHSSKKRKEFLVL CGQ S+N+S++ GK ED G S DD+ EDEEN TVC SDRH RP KKQKNNK GKG+EW+LRKKEQMRRRGN VP +TKYTGRKRK RF Sbjct: 1 MASRPEVIAPPEIFYDDAEARKYTSSSRIVQIQATLSERALELLALPDDGVPKLLLDIGCGSGLSGETISENGHHWIGLDISASMLNVAVEREVEGDLLLGDMGQGIGIRPGVMDGAISISAVQWLCNADKSSHNPRLRLKAFFTSLYKCLSNGARAVFQVYPENIDQRELILNAAMHAGFAGGIVVDFPHSSKKRKEFLVLTCGQCSVNASISKGKNED--GESCSDDDSEDEENQTVCISDRH-RPRKKQKNNKVGKGKEWLLRKKEQMRRRGNVVPPNTKYTGRKRKDRF 290
BLAST of rna-XM_004507827.3 vs. UniProtKB/TrEMBL
Match: tr|V7CX56|V7CX56_PHAVU (18S rRNA (Guanine-N(7))-methyltransferase OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G113000g PE=3 SV=1) HSP 1 Score: 501.901 bits (1291), Expect = 5.882e-178 Identity = 238/293 (81.23%), Postives = 269/293 (91.81%), Query Frame = 0 Query: 1 MGSRPELVAPPEIFYDDTEARKYTSSSRIIEIQASLSERALELLALPEDDVPKLLLDIGCGSGLSGETISENGHHWIGLDISPSMLNIALEREVEGDLLLSDMGQGLGLRPGVIDGAISISAVQWLCNADRSSHNPRLRLKAFFTSLYKCLSSGAKAVFQLYPQNVAQRELILNAAMNAGFGGGIVVDFPHSSKKRKEFLVLACGQQSMNSSLTIGKTEDEKGFSDHDDEDEDEENHTVCFSDRHRRPFKKQKNNKNGKGREWILRKKEQMRRRGNDVPLDTKYTGRKRKGRF 293 M SRPE+VAPPEIFYDD+EARKYTSSSRI++IQA+LSERALELLALP+D +PKLLLDIGCGSGLSGET++E+GHHWIGLDIS SMLN+ALEREVEGDL+L DMGQGLG+RPGVIDGAISISAVQWLCNAD+SSHNPRLRLKAFFTSLYKCLS+GA+AVFQ+YP+N+ QRELILNAAM+AGF GGIVVDFPHSSK+RKEFLVL CGQ+S+NSS++ GK ED + SD D EDEEN TVC SDRHR K+++NNKNGKG+EWILRKKEQMRRRGN VP D+KYTGRKRK RF Sbjct: 1 MASRPEVVAPPEIFYDDSEARKYTSSSRIVQIQATLSERALELLALPDDGIPKLLLDIGCGSGLSGETLTEDGHHWIGLDISASMLNVALEREVEGDLVLGDMGQGLGVRPGVIDGAISISAVQWLCNADKSSHNPRLRLKAFFTSLYKCLSNGARAVFQVYPENIDQRELILNAAMHAGFAGGIVVDFPHSSKRRKEFLVLTCGQRSVNSSVSKGKNEDGESCSDED--SEDEENQTVCISDRHRPRKKQKRNNKNGKGKEWILRKKEQMRRRGNAVPSDSKYTGRKRKDRF 291
BLAST of rna-XM_004507827.3 vs. UniProtKB/TrEMBL
Match: tr|G7JUC5|G7JUC5_MEDTR (Putative magnesium protoporphyrin IX methyltransferase OS=Medicago truncatula OX=3880 GN=11421941 PE=3 SV=1) HSP 1 Score: 498.819 bits (1283), Expect = 1.135e-176 Identity = 253/293 (86.35%), Postives = 269/293 (91.81%), Query Frame = 0 Query: 1 MGSRPELVAPPEIFYDDTEARKYTSSSRIIEIQASLSERALELLALPEDDVPKLLLDIGCGSGLSGETISENGHHWIGLDISPSMLNIALEREVEGDLLLSDMGQGLGLRPGVIDGAISISAVQWLCNADRSSHNPRLRLKAFFTSLYKCLSSGAKAVFQLYPQNVAQRELILNAAMNAGFGGGIVVDFPHSSKKRKEFLVLACGQQSMNSSLTIGKTEDEKGFSDHDDEDEDEENHTVCFSDRHRRPFKKQKNNKNGKGREWILRKKEQMRRRGNDVPLDTKYTGRKRKGRF 293 M SRPE VAPPEIFYDDTEARKYTSSSRII+IQASLSERALELLALPED VPKLLLDIGCGSGLSGET+SE GHHWIGLDISPSMLNIALEREVEGDLLLSDMGQGLGLRPGVIDGAISISAVQWLCNADRSSHNPRLRLKAFFTSLY+CL++GAKAVFQ+YP+NV QRELILNAAM+AGF GGIVVDFPHSSKKRKEFLVL CGQ S +SL+ GK EDE+ SD E EDEEN TV SDRHR K++KNNK+GKG+EWILRKK+QMRRRGNDVPLDTKYTGRKRKGRF Sbjct: 1 MASRPERVAPPEIFYDDTEARKYTSSSRIIDIQASLSERALELLALPEDGVPKLLLDIGCGSGLSGETLSEEGHHWIGLDISPSMLNIALEREVEGDLLLSDMGQGLGLRPGVIDGAISISAVQWLCNADRSSHNPRLRLKAFFTSLYRCLANGAKAVFQVYPENVDQRELILNAAMHAGFSGGIVVDFPHSSKKRKEFLVLGCGQLSTKASLSKGKIEDEEKLSDE--ESEDEENQTVRLSDRHRPVKKQRKNNKSGKGKEWILRKKDQMRRRGNDVPLDTKYTGRKRKGRF 291
BLAST of rna-XM_004507827.3 vs. UniProtKB/TrEMBL
Match: tr|A0A6A5MYW7|A0A6A5MYW7_LUPAL (Putative S-adenosyl-L-methionine-dependent methyltransferase OS=Lupinus albus OX=3870 GN=Lal_00006693 PE=3 SV=1) HSP 1 Score: 496.508 bits (1277), Expect = 1.058e-175 Identity = 242/293 (82.59%), Postives = 265/293 (90.44%), Query Frame = 0 Query: 1 MGSRPELVAPPEIFYDDTEARKYTSSSRIIEIQASLSERALELLALPEDDVPKLLLDIGCGSGLSGETISENGHHWIGLDISPSMLNIALEREVEGDLLLSDMGQGLGLRPGVIDGAISISAVQWLCNADRSSHNPRLRLKAFFTSLYKCLSSGAKAVFQLYPQNVAQRELILNAAMNAGFGGGIVVDFPHSSKKRKEFLVLACGQQSMNSSLTIGKTEDEKGFSDHDDEDEDEENHTVCFSDRHRRPFKKQKNNKNGKGREWILRKKEQMRRRGNDVPLDTKYTGRKRKGRF 293 M SRPE +APPEIFYDD EARKYTSSSRI++IQA LSERALELLALPED VPKLLLDIGCGSGLSGET+SE+GHHWIGLDISPSMLNIA+EREVEGDLLL+DMGQGLGLRPGVIDGAISISAVQWLCNAD+SSHNPRLRLKAFFTSLYKCLS+GA+AVFQ+YP+N+ QRELILNAAM AGF GGIVVDFPHSSKKRKEFLVL CGQ+SMN+S+ GK ED G S DD+ E++EN TVC SDRH RP KK K NK+ KGREWI+RKK+QMRRRGN VP +TKYTGRKRK RF Sbjct: 1 MASRPEAIAPPEIFYDDVEARKYTSSSRIVQIQAELSERALELLALPEDGVPKLLLDIGCGSGLSGETLSEDGHHWIGLDISPSMLNIAVEREVEGDLLLADMGQGLGLRPGVIDGAISISAVQWLCNADKSSHNPRLRLKAFFTSLYKCLSNGARAVFQVYPENIDQRELILNAAMRAGFAGGIVVDFPHSSKKRKEFLVLTCGQRSMNASMPNGKDED--GESCSDDDMEEDENQTVCISDRH-RPRKKLKGNKSSKGREWIMRKKDQMRRRGNVVPPNTKYTGRKRKDRF 290
BLAST of rna-XM_004507827.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4X7N0|A0A9D4X7N0_PEA (18S rRNA (Guanine-N(7))-methyltransferase OS=Pisum sativum OX=3888 GN=KIW84_040491 PE=3 SV=1) HSP 1 Score: 494.582 bits (1272), Expect = 5.703e-175 Identity = 253/293 (86.35%), Postives = 265/293 (90.44%), Query Frame = 0 Query: 1 MGSRPELVAPPEIFYDDTEARKYTSSSRIIEIQASLSERALELLALPEDDVPKLLLDIGCGSGLSGETISENGHHWIGLDISPSMLNIALEREVEGDLLLSDMGQGLGLRPGVIDGAISISAVQWLCNADRSSHNPRLRLKAFFTSLYKCLSSGAKAVFQLYPQNVAQRELILNAAMNAGFGGGIVVDFPHSSKKRKEFLVLACGQQSMNSSLTIGKTEDEKGFSDHDDEDEDEENHTVCFSDRHRRPFKKQKNNKNGKGREWILRKKEQMRRRGNDVPLDTKYTGRKRKGRF 293 M SRPE VAPPEIFYDDTEARKYTSSSRIIEIQASLSERALELLALPED VPKLLLDIGCGSGLSGET+SE GHHWIGLDISPSMLNIA EREVEGDLLLSDMGQGLG RPGVIDGAISISAVQWLCNADRSSHNPRLRLKAFFTSLYKCLS+GAKAVFQ+YP+N QRELI+NAAM+AGF GGIVVDFPHSSKKRKEFLVLACGQ S N+SL+ G+ EDE SD D E EDEEN TV DRHR K+QK NK+GKGREWILRKK+QMRRRGNDVP DTKYTGRKRKGRF Sbjct: 1 MASRPERVAPPEIFYDDTEARKYTSSSRIIEIQASLSERALELLALPEDGVPKLLLDIGCGSGLSGETLSEEGHHWIGLDISPSMLNIASEREVEGDLLLSDMGQGLGFRPGVIDGAISISAVQWLCNADRSSHNPRLRLKAFFTSLYKCLSNGAKAVFQVYPENNDQRELIMNAAMHAGFAGGIVVDFPHSSKKRKEFLVLACGQLSTNASLSNGRNEDENQLSDDDSESEDEENQTVRNLDRHRH-LKRQKKNKSGKGREWILRKKDQMRRRGNDVPQDTKYTGRKRKGRF 292 The following BLAST results are available for this feature:
BLAST of rna-XM_004507827.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11) Total hits: 1
BLAST of rna-XM_004507827.3 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot) Total hits: 7
BLAST of rna-XM_004507827.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_004507827.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004507827.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004507827.3; organism=Cicer arietinum; type=mRNA; length=882bpback to top protein sequence of rna-XM_004507827.3_CaCDCfrontier-NCBI_v1 >rna-XM_004507827.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004507827.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004507827.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=293bpback to top mRNA from alignment at chr7:2487116..2490855+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_004507827.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004507827.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004507827.3; organism=Cicer arietinum; type=mRNA; length=3740bp; location=Sequence derived from: chr7:2487116..2490855+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at chr7:2487116..2490855+ >rna-XM_004507827.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004507827.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004507827.3; organism=Cicer arietinum; type=CDS; length=882bp; location=Sequence derived from: chr7:2487116..2490855+ (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|