rna-XM_012714236.2

Transcript Overview
Namerna-XM_012714236.2
Unique Namerna-XM_012714236.2_CaCDCfrontier-NCBI_v1
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length1482
Productreplication stress response regulator SDE2
References
External references for this mRNA
DatabaseAccession
GeneID101507489
GenBankXM_012714236.2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr3chromosomechr3:39439995..39442683 +Cicer arietinum CDC Frontier NCBI RefSeq v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ascanL170Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cacanL081Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancanL0144Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0333Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0392Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cacanL297Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancanL0569Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0752Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cancanR104Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cancanR120Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
caicanL0245Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancanL1076Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
canccR0272Cajanus cajan Asha genome v1.0Cajanus cajan
canccR0317Cajanus cajan Asha genome v1.0Cajanus cajan
cancrR231Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cancrR286Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
canpvR192Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canpvR217Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvfhR183Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canvfhR192Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canpvR262Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvssR213Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR228Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR235Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvuaR140Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuR150Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canzwsR150Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuaR171Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canzwsR166Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuR186Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canzwsR175Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuaR196Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuR210Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canpsR195Pisum sativum Cameor genome v1aPisum sativum
canpsR227Pisum sativum Cameor genome v1aPisum sativum
avjcanL115Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL156Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL473Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cancarR133Cicer arietinum
cancarR180Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
rna-KK1_011212Cajanus cajan Asha genome v1.0Cajanus cajan
LR48_mrnaVigan09g162500Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Va09G049530.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-TanjilR_10869Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_02510Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Hedin2.R1.5g191640.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Cr_07597.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
evm.model.Chr06.1333.1.62113171Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Phvul.006G112400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun06g123300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Psat03G0014900-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Psat3g002680.1Pisum sativum Cameor genome v1aPisum sativum
jg30752.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Ca_07262.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Ca_01310Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC101507489gene-LOC101507489_CaCDCfrontier-NCBI_v1Cicer arietinumgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_012714236.2-1exon-XM_012714236.2-1_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_012714236.2-2exon-XM_012714236.2-2_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_012714236.2-3exon-XM_012714236.2-3_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_012714236.2-4exon-XM_012714236.2-4_CaCDCfrontier-NCBI_v1Cicer arietinumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_012569690.1cds-XP_012569690.1_CaCDCfrontier-NCBI_v1Cicer arietinumCDS
cds-XP_012569690.1cds-XP_012569690.1_CaCDCfrontier-NCBI_v1_2Cicer arietinumCDS
cds-XP_012569690.1cds-XP_012569690.1_CaCDCfrontier-NCBI_v1_3Cicer arietinumCDS
cds-XP_012569690.1cds-XP_012569690.1_CaCDCfrontier-NCBI_v1_4Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_012714236.2_CaCDCfrontier-NCBI_v1rna-XM_012714236.2_CaCDCfrontier-NCBI_v1Cicer arietinumpolypeptide
rna-XM_012714236.2_CaCDCfrontier-NCBI_v1rna-XM_012714236.2_CaCDCfrontier-NCBI_v1-proteinCicer arietinumpolypeptide


Homology
[Close]
BLAST of rna-XM_012714236.2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:432186-433727 REVERSE LENGTH=415)

HSP 1 Score: 307.76 bits (787), Expect = 3.311e-100
Identity = 205/457 (44.86%), Postives = 273/457 (59.74%), Query Frame = 0 
Query:   30 EKSQTMYNLFVKHLDGKTLTLLFPSPILYANSIKDRLFQLTGIPIRHQRLVTGCRHLNDDKSAICCSPEDGNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWRAGEEERKLEKVAEEFLKKQMKKNKGKGKNGDVDGEAHKYVAKYREQSERCVADVALSVQDSLRDSKRKSSPISEASLPHDRKKLKIWMGKRTLNESDDSDSDEDVDDVEGETDKSVLLNSQNESGLTKAEDSSDSVTGLKRDGDSSGVGSCESGSEEEKEAVVEEGKVESAGGSQSCDTTIQASVAAEPELMVHDEMMEINAVPCSETLDSGISA---QDQDNKVDGTVAQVS-NIVSSEIVANDMEIDGSLEHKTVVIEESLPSISVPVKE-EPLNFDAFNSAAELEILGLEKLKTELQLHGLKCGGTLQERAARLFLLKSTP 481
            ++S      FV+ LDGK+LTL F SP+ Y   IK R+F+ T IP   QRL++G   ++D  SAI   P+      +V L+L L+GGKGGFGSLLRG   KAGQKKTNNFDACRDMSGRRLRHVNAE RL+EW+ GEE R LEK A E+LKKQ  K     K G  +G   KYV KY+E+S++C+  V L++ +S ++ KRK+   +E+     +K+LKIW GKR + +SD  DSD++      E +KSV+LN+                     DGDSSG  SC SGSEEE +AV+           +S D   +     +   ++ +EM   N +P S  +D   +     DQ  KV+ +      N+V    VA +  I  +   +    +E++   +V  K  EPLNFD FNS A++E+LG+E+LKTELQ  GLKCGGTL+ERAARLFLLKSTP
Sbjct:    3 DQSSKPLQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDG-SAIS-QPD-----ATVNLVLSLRGGKGGFGSLLRGGGMKAGQKKTNNFDACRDMSGRRLRHVNAENRLQEWKDGEEGRNLEKKALEYLKKQSNKV----KQGVGNGATQKYVNKYKEESDKCILAVDLALNESFKNGKRKAKIGAES---EKKKRLKIWKGKRAVEDSDSDDSDDE------EDEKSVVLNNGGH------------------DGDSSGKSSCNSGSEEENDAVMH----------RSFDVVKEEITGVQG--IIEEEM---NDLPVSVAVDDANTVADEMDQLEKVEKSSGDAGKNLVD---VACETLITSAAVKREGTAKETVSVDAVCCKPVEPLNFDDFNSPADMEVLGMERLKTELQSRGLKCGGTLRERAARLFLLKSTP 403
[Close]
BLAST of rna-XM_012714236.2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:432186-433727 REVERSE LENGTH=415)

HSP 1 Score: 307.76 bits (787), Expect = 3.311e-100
Identity = 205/457 (44.86%), Postives = 273/457 (59.74%), Query Frame = 0 
Query:   30 EKSQTMYNLFVKHLDGKTLTLLFPSPILYANSIKDRLFQLTGIPIRHQRLVTGCRHLNDDKSAICCSPEDGNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWRAGEEERKLEKVAEEFLKKQMKKNKGKGKNGDVDGEAHKYVAKYREQSERCVADVALSVQDSLRDSKRKSSPISEASLPHDRKKLKIWMGKRTLNESDDSDSDEDVDDVEGETDKSVLLNSQNESGLTKAEDSSDSVTGLKRDGDSSGVGSCESGSEEEKEAVVEEGKVESAGGSQSCDTTIQASVAAEPELMVHDEMMEINAVPCSETLDSGISA---QDQDNKVDGTVAQVS-NIVSSEIVANDMEIDGSLEHKTVVIEESLPSISVPVKE-EPLNFDAFNSAAELEILGLEKLKTELQLHGLKCGGTLQERAARLFLLKSTP 481
            ++S      FV+ LDGK+LTL F SP+ Y   IK R+F+ T IP   QRL++G   ++D  SAI   P+      +V L+L L+GGKGGFGSLLRG   KAGQKKTNNFDACRDMSGRRLRHVNAE RL+EW+ GEE R LEK A E+LKKQ  K     K G  +G   KYV KY+E+S++C+  V L++ +S ++ KRK+   +E+     +K+LKIW GKR + +SD  DSD++      E +KSV+LN+                     DGDSSG  SC SGSEEE +AV+           +S D   +     +   ++ +EM   N +P S  +D   +     DQ  KV+ +      N+V    VA +  I  +   +    +E++   +V  K  EPLNFD FNS A++E+LG+E+LKTELQ  GLKCGGTL+ERAARLFLLKSTP
Sbjct:    3 DQSSKPLQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDG-SAIS-QPD-----ATVNLVLSLRGGKGGFGSLLRGGGMKAGQKKTNNFDACRDMSGRRLRHVNAENRLQEWKDGEEGRNLEKKALEYLKKQSNKV----KQGVGNGATQKYVNKYKEESDKCILAVDLALNESFKNGKRKAKIGAES---EKKKRLKIWKGKRAVEDSDSDDSDDE------EDEKSVVLNNGGH------------------DGDSSGKSSCNSGSEEENDAVMH----------RSFDVVKEEITGVQG--IIEEEM---NDLPVSVAVDDANTVADEMDQLEKVEKSSGDAGKNLVD---VACETLITSAAVKREGTAKETVSVDAVCCKPVEPLNFDDFNSPADMEVLGMERLKTELQSRGLKCGGTLRERAARLFLLKSTP 403
[Close]
BLAST of rna-XM_012714236.2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:1980885-1982055 FORWARD LENGTH=345)

HSP 1 Score: 81.2629 bits (199), Expect = 1.479e-16
Identity = 39/53 (73.58%), Postives = 46/53 (86.79%), Query Frame = 0 
Query:  431 EPLNFDAFNSAAELEILGLEKLKTELQLHGLKCGGTLQERAARLFLLKSTPLD 483
            EPLNF  F +A ++E+LG+E+LKTELQ  GLKC GTL+ERAARLFLLKSTPLD
Sbjct:  283 EPLNFAEFKAATDMEVLGMERLKTELQSRGLKCRGTLRERAARLFLLKSTPLD 335

HSP 2 Score: 70.4774 bits (171), Expect = 6.453e-13
Identity = 70/218 (32.11%), Postives = 97/218 (44.50%), Query Frame = 0 
Query:   38 LFVKHLDGKTLTLLFPSPILYANSIKDRLFQLTGIPIRHQRLVTGCRHLNDDKSAICCSPEDGNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWRAGEEERKLEKVAEEFLKKQMKKNKGKGKNGDVDGEAHKYVAKYREQSERCVADVALSVQDSLRDSKRKSSPISEASLPHDRKKLKIWMGKRTL 255
             FV+ LDGK++TL F SPI     IK R+F+ T IP   QRL++G   +     A   S  D  M     L+L L+GGKGG GSLLR    KAGQKKTNNFD+C                                                  GD  G   K V KY+  S++C+  V L++ ++ ++  ++       +     K++KIW GKR +
Sbjct:   11 FFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQI---PGASAISQSDTTM----NLVLSLRGGKGGLGSLLRNVVMKAGQKKTNNFDSCV-------------------------------------------------GD--GATQKNVNKYKGGSDKCILAVHLALNETFKNGNKRKGKKMGTAESEKSKRIKIWNGKRAV 170
[Close]
BLAST of rna-XM_012714236.2 vs. Araport11
Match: | (Symbols: ATO | ATROPOS | chr5:1862623-1866298 REVERSE LENGTH=504)

HSP 1 Score: 61.6178 bits (148), Expect = 7.362e-10
Identity = 35/76 (46.05%), Postives = 47/76 (61.84%), Query Frame = 0 
Query:  417 IEESLPSISVPVKEEPLNFDAFNSAAELEILGLEKLKTELQLHGLKCGGTLQERAARLFLLKSTPLDKLPKKLLAK 492
            I E L +  +P +   ++ D +++  EL  +G EKLK  L   GLK GGT Q+RA RLFL K TPL+KL KK  A+
Sbjct:  224 IVEGLDNELIPSQHTVIDLDYYSTVEELVDVGPEKLKEALGALGLKVGGTPQQRAERLFLTKHTPLEKLDKKHFAR 299
[Close]
BLAST of rna-XM_012714236.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q8K1J5|SDE2_MOUSE (Splicing regulator SDE2 OS=Mus musculus OX=10090 GN=Sde2 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.852e-12
Identity = 37/62 (59.68%), Postives = 45/62 (72.58%), Query Frame = 0 
Query:  111 RLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWRAGEEERKLEK 172
            RL+GGKGGFGS+LR  A  A  +KT N +ACRD+SGRRLR VN EK + EW   + ER+ EK
Sbjct:   73 RLRGGKGGFGSMLR--ALGAQIEKTTNREACRDLSGRRLRDVNHEKAMAEWVKQQAEREAEK 132
[Close]
BLAST of rna-XM_012714236.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q7T293|SDE2_DANRE (Splicing regulator SDE2 OS=Danio rerio OX=7955 GN=sde2 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.309e-11
Identity = 43/106 (40.57%), Postives = 59/106 (55.66%), Query Frame = 0 
Query:  395 VSSEIVANDMEIDGSLEHKTVVIEESLPSISVPVK--------EEPLNFDAFNSAAELEILGLEKLKTELQLHGLKCGGTLQERAARLFLLKSTPLDKLPKKLLAK 492
            ++ E+     E+    E  T  I    PS S+P +        E+PL+  + +   +LE LGLE+LK EL   G+KCGGTLQERAARLF +K    D++   LLAK
Sbjct:  358 MAEEVQKTAEEVQKKTEESTAEIS---PSSSIPEEKSQVLSQVEDPLDLLSVSGPEQLEALGLERLKKELMERGMKCGGTLQERAARLFSVKGLTPDQIDPSLLAK 460
[Close]
BLAST of rna-XM_012714236.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FG01|ATO_ARATH (Splicing factor SF3a60 homolog OS=Arabidopsis thaliana OX=3702 GN=ATO PE=1 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 7.248e-9
Identity = 35/76 (46.05%), Postives = 47/76 (61.84%), Query Frame = 0 
Query:  417 IEESLPSISVPVKEEPLNFDAFNSAAELEILGLEKLKTELQLHGLKCGGTLQERAARLFLLKSTPLDKLPKKLLAK 492
            I E L +  +P +   ++ D +++  EL  +G EKLK  L   GLK GGT Q+RA RLFL K TPL+KL KK  A+
Sbjct:  224 IVEGLDNELIPSQHTVIDLDYYSTVEELVDVGPEKLKEALGALGLKVGGTPQQRAERLFLTKHTPLEKLDKKHFAR 299
[Close]
BLAST of rna-XM_012714236.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9D554|SF3A3_MOUSE (Splicing factor 3A subunit 3 OS=Mus musculus OX=10090 GN=Sf3a3 PE=1 SV=2)

HSP 1 Score: 58.5362 bits (140), Expect = 6.225e-8
Identity = 32/60 (53.33%), Postives = 39/60 (65.00%), Query Frame = 0 
Query:  433 LNFDAFNSAAELEILGLEKLKTELQLHGLKCGGTLQERAARLFLLKSTPLDKLPKKLLAK 492
            L+  AF+S  EL  LGL++LK+ L   GLKCGGTL+ERA RLF  K   L+ L   L AK
Sbjct:  244 LDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKGKSLESLDTSLFAK 303
[Close]
BLAST of rna-XM_012714236.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q12874|SF3A3_HUMAN (Splicing factor 3A subunit 3 OS=Homo sapiens OX=9606 GN=SF3A3 PE=1 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 6.618e-8
Identity = 32/60 (53.33%), Postives = 39/60 (65.00%), Query Frame = 0 
Query:  433 LNFDAFNSAAELEILGLEKLKTELQLHGLKCGGTLQERAARLFLLKSTPLDKLPKKLLAK 492
            L+  AF+S  EL  LGL++LK+ L   GLKCGGTL+ERA RLF  K   L+ L   L AK
Sbjct:  244 LDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKGKSLESLDTSLFAK 303
[Close]
BLAST of rna-XM_012714236.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q07G43|SDE2_XENTR (Splicing regulator SDE2 OS=Xenopus tropicalis OX=8364 GN=sde2 PE=2 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 4.156e-7
Identity = 41/80 (51.25%), Postives = 50/80 (62.50%), Query Frame = 0 
Query:  422 PSISVPVKE---------EPLNFDAFNSAAELEILGLEKLKTELQLHGLKCGGTLQERAARLFLLKSTPLDKLPKKLLAK 492
            PSI +  +E          P++  AF +AAELE LGLEKLK EL    LKCGGTLQERAARLF ++  P D++   L AK
Sbjct:  382 PSIPISKQELQQPSNAETSPIDLLAFKTAAELEALGLEKLKLELGALALKCGGTLQERAARLFSVRGLPRDQIDPSLFAK 461
[Close]
BLAST of rna-XM_012714236.2 vs. UniProtKB/Swiss-Prot
Match: sp|O14113|SDE2_SCHPO (Splicing regulator sde2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sde2 PE=1 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 9.727e-7
Identity = 44/120 (36.67%), Postives = 63/120 (52.50%), Query Frame = 0 
Query:  108 LLLRLKGGKGGFGSLLRGAATKAGQKKT--NNFDACRDMSGRRLRHVNAEKRLEEWRAGEEERKLEKVAEEFLKKQMKKNKGKGKNGDVDGEAHKY-VAKYREQSERCVADVALSVQDSL 224
            L  R+ GGKGGFGS LR A  +  +K+    N D+CRD+ G RL  +   K L E+ A       +K AE   KK+ KK K   K    D  + ++   +Y E  E+ V++V  + Q+SL
Sbjct:   77 LCTRVLGGKGGFGSQLRAAGGRMSKKRNEQENQDSCRDLDGNRLGTIRQAKELSEYLA-------KKPAETRAKKEAKKQK-LNKVLAADSSSSRFDDHEYLEDLEQSVSNVRDAFQNSL 188
[Close]
BLAST of rna-XM_012714236.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3E1S0|A0A1S3E1S0_CICAR (Replication stress response regulator SDE2 OS=Cicer arietinum OX=3827 GN=LOC101507489 PE=3 SV=1)

HSP 1 Score: 1009.21 bits (2608), Expect = 0.000e+0
Identity = 493/493 (100.00%), Postives = 493/493 (100.00%), Query Frame = 0 
Query:    1 MYSFLHSVETRIPQNPNFGKISPNSTMEHEKSQTMYNLFVKHLDGKTLTLLFPSPILYANSIKDRLFQLTGIPIRHQRLVTGCRHLNDDKSAICCSPEDGNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWRAGEEERKLEKVAEEFLKKQMKKNKGKGKNGDVDGEAHKYVAKYREQSERCVADVALSVQDSLRDSKRKSSPISEASLPHDRKKLKIWMGKRTLNESDDSDSDEDVDDVEGETDKSVLLNSQNESGLTKAEDSSDSVTGLKRDGDSSGVGSCESGSEEEKEAVVEEGKVESAGGSQSCDTTIQASVAAEPELMVHDEMMEINAVPCSETLDSGISAQDQDNKVDGTVAQVSNIVSSEIVANDMEIDGSLEHKTVVIEESLPSISVPVKEEPLNFDAFNSAAELEILGLEKLKTELQLHGLKCGGTLQERAARLFLLKSTPLDKLPKKLLAKK 493
            MYSFLHSVETRIPQNPNFGKISPNSTMEHEKSQTMYNLFVKHLDGKTLTLLFPSPILYANSIKDRLFQLTGIPIRHQRLVTGCRHLNDDKSAICCSPEDGNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWRAGEEERKLEKVAEEFLKKQMKKNKGKGKNGDVDGEAHKYVAKYREQSERCVADVALSVQDSLRDSKRKSSPISEASLPHDRKKLKIWMGKRTLNESDDSDSDEDVDDVEGETDKSVLLNSQNESGLTKAEDSSDSVTGLKRDGDSSGVGSCESGSEEEKEAVVEEGKVESAGGSQSCDTTIQASVAAEPELMVHDEMMEINAVPCSETLDSGISAQDQDNKVDGTVAQVSNIVSSEIVANDMEIDGSLEHKTVVIEESLPSISVPVKEEPLNFDAFNSAAELEILGLEKLKTELQLHGLKCGGTLQERAARLFLLKSTPLDKLPKKLLAKK
Sbjct:    1 MYSFLHSVETRIPQNPNFGKISPNSTMEHEKSQTMYNLFVKHLDGKTLTLLFPSPILYANSIKDRLFQLTGIPIRHQRLVTGCRHLNDDKSAICCSPEDGNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWRAGEEERKLEKVAEEFLKKQMKKNKGKGKNGDVDGEAHKYVAKYREQSERCVADVALSVQDSLRDSKRKSSPISEASLPHDRKKLKIWMGKRTLNESDDSDSDEDVDDVEGETDKSVLLNSQNESGLTKAEDSSDSVTGLKRDGDSSGVGSCESGSEEEKEAVVEEGKVESAGGSQSCDTTIQASVAAEPELMVHDEMMEINAVPCSETLDSGISAQDQDNKVDGTVAQVSNIVSSEIVANDMEIDGSLEHKTVVIEESLPSISVPVKEEPLNFDAFNSAAELEILGLEKLKTELQLHGLKCGGTLQERAARLFLLKSTPLDKLPKKLLAKK 493
[Close]
BLAST of rna-XM_012714236.2 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3NSI7|A0A2K3NSI7_TRIPR (Replication stress response regulator SDE2 OS=Trifolium pratense OX=57577 GN=L195_g002465 PE=3 SV=1)

HSP 1 Score: 691.804 bits (1784), Expect = 0.000e+0
Identity = 392/465 (84.30%), Postives = 411/465 (88.39%), Query Frame = 0 
Query:   27 MEHEKSQTMYNLFVKHLDGKTLTLLFPSPILYANSIKDRLFQLTGIPIRHQRLVTGCRHLNDDKSAICCSPEDGNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWRAGEEERKLEKVAEEFLKKQMKKNKGKGKNGDVDGEAHKYVAKYREQSERCVADVALSVQDSLRDSKRKSSPISEASLPHDRKKLKIWMGKRTLNESDDSDSDEDVDDVEGETDKSVLLNSQNESGLTKAEDSSDSVTGLKRDGDSSGVGSCESGSEEE-------KEAVVEEGKVESAGGSQSCDTTIQ-ASVAAEPELMVHDEMMEINAVPCSETLDSGISAQD---QDNKVDGTVAQVSNIVSSEIVANDMEIDGSLEHKTVVIEESLPSISVPVKEEPLNFDAFNSAAELEILGLEKLKTELQLHGLKCGGTLQERAARLFLLKST 480
            ME EKSQTMYNLFVKHLDGKTLTLLFPSPILYANSIKDRLFQLTGIPI+HQRLVTGCRHLNDDKSAICCSPE GNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWRAGEE+RKLEKVAEEFLKKQMKKNKGKGKN   DGEA KYVAKYREQSERCVA+VALSVQDSL   KRKSSP SEASLP D KKLKIWMGKRTLNESD  DSDEDVD+ EGET+KSVLLNSQNESGL KAEDSSDSV GLKRDG+SSGVGSCESGSEEE       K   VEEGKVE+ GGSQS +T  +  SVAAEP  MV+D++ME NAVPCSE L+SGISAQD   QD KV GTV Q SNIVSSEI+ NDME+DGSLE KT V+E SLP+ +VP KEEPLNFD FNSAAELE+LGLE LKTELQ  GLKCGGTLQERAARLFLLKST
Sbjct:    1 MEQEKSQTMYNLFVKHLDGKTLTLLFPSPILYANSIKDRLFQLTGIPIQHQRLVTGCRHLNDDKSAICCSPEGGNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWRAGEEDRKLEKVAEEFLKKQMKKNKGKGKN--GDGEAQKYVAKYREQSERCVAEVALSVQDSL---KRKSSPTSEASLPSDPKKLKIWMGKRTLNESDSDDSDEDVDNDEGETEKSVLLNSQNESGLNKAEDSSDSVNGLKRDGESSGVGSCESGSEEEKETVEEGKVETVEEGKVETVGGSQSSETIKENLSVAAEP--MVNDDVMEANAVPCSEALESGISAQDNGCQDYKVHGTVTQDSNIVSSEILPNDMEVDGSLEDKTAVMEVSLPNTTVPAKEEPLNFDDFNSAAELEVLGLENLKTELQSRGLKCGGTLQERAARLFLLKST 458
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BLAST of rna-XM_012714236.2 vs. UniProtKB/TrEMBL
Match: tr|G7L437|G7L437_MEDTR (Replication stress response regulator SDE2 OS=Medicago truncatula OX=3880 GN=11431773 PE=3 SV=1)

HSP 1 Score: 685.641 bits (1768), Expect = 0.000e+0
Identity = 370/457 (80.96%), Postives = 391/457 (85.56%), Query Frame = 0 
Query:   27 MEHEKSQTMYNLFVKHLDGKTLTLLFPSPILYANSIKDRLFQLTGIPIRHQRLVTGCRHLNDDKSAICCSPEDGNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWRAGEEERKLEKVAEEFLKKQMKKNKGKGKNGDVDGEAHKYVAKYREQSERCVADVALSVQDSLRDSKRKSSPISEASLPHDRKKLKIWMGKRTLNESDDSDSDEDVDDVEGETDKSVLLNSQNESGLTKAEDSSDSVTGLKRDGDSSGVGSCESGSEEEKEAVVEEGKVESAGGSQSCDTTIQASVAAEPELMVHDEMMEINAVPCSETLDSGISAQD---QDNKVDGTVAQVSNIVSSEIVANDMEIDGSLEHKTVVIEESLPSISVPVKEEPLNFDAFNSAAELEILGLEKLKTELQLHGLKCGGTLQERAARLFLLKST 480
            ME EKS  M+NLFVKHL+GKTLTLLFPSPIL A SIKDRLF LTGIPI+HQRLVTG RHLNDD S ICCSPE GNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWR GEE+RKLEK AEEFLKKQMKKN  KGK  + D EA KYVAKYREQSERCVA+VA SV DS+R +KRKSSPISE S   D+KKLKIWMGKR LNESDD     DV D EGET+KSVLLNSQNESGL KAE SSDSV G KRDGDSSGVGSCESGSEEEKE VV EGKVE    SQS + +I+A  +   E MV+DEMME NAVPCSETLDS IS QD   QD++V GT AQVSN+VSSEIV+NDMEIDGSLEHKTVVIEESLPS SVP K+EPLNFDAFNSAAELE+LGLE LKTELQ  GLK GGTLQERAARLFLLKST
Sbjct:    1 MEQEKSHRMFNLFVKHLNGKTLTLLFPSPILSATSIKDRLFHLTGIPIQHQRLVTGFRHLNDDNSEICCSPEGGNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWREGEEDRKLEKTAEEFLKKQMKKNN-KGKGKNGDVEAQKYVAKYREQSERCVAEVAESVLDSIRYAKRKSSPISEGSPSRDQKKLKIWMGKRALNESDDDSDG-DVTDDEGETEKSVLLNSQNESGLNKAEGSSDSVAGFKRDGDSSGVGSCESGSEEEKETVV-EGKVEIVERSQSTE-SIEAKPSIAAETMVNDEMMEANAVPCSETLDSLISVQDNDYQDSQVGGTGAQVSNVVSSEIVSNDMEIDGSLEHKTVVIEESLPSNSVPAKKEPLNFDAFNSAAELEVLGLENLKTELQSRGLKFGGTLQERAARLFLLKST 453
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BLAST of rna-XM_012714236.2 vs. UniProtKB/TrEMBL
Match: tr|A0A9D5AVV0|A0A9D5AVV0_PEA (Replication stress response regulator SDE2 OS=Pisum sativum OX=3888 GN=KIW84_030149 PE=3 SV=1)

HSP 1 Score: 681.019 bits (1756), Expect = 0.000e+0
Identity = 371/458 (81.00%), Postives = 397/458 (86.68%), Query Frame = 0 
Query:   27 MEHEKSQTMYNLFVKHLDGKTLTLLFPSPILYANSIKDRLFQLTGIPIRHQRLVTGCRHLNDDKSAICCSPEDGNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWRAGEEERKLEKVAEEFLKKQMKKNKGKGKNGDVDGEAHKYVAKYREQSERCVADVALSVQDSLRDSKRKSSPISEASLPHDRKKLKIWMGKRTL-NESDDSDSDEDVDDVEGETDKSVLLNSQNESGLTKAEDSSDSVTGLKRDGDSSGVGSCESGSEEEKEAVVEEGKVESAGGSQSCDTTIQASVAAEPELMVHDEMMEINAVPCSETLDSGISAQD---QDNKVDGTVAQVSNIVSSEIVANDMEIDGSLEHKTVVIEESLPSISVPVKEEPLNFDAFNSAAELEILGLEKLKTELQLHGLKCGGTLQERAARLFLLKST 480
            ME EKS  MYNLFVKHL+GKTLTLLFPSPILYA SIKDRLF LTGIPI+HQRLVTGCRHLNDDKSAI CSPE GNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWR GEE+RKLEKVAE+FLKKQMKKNK       V+GEA KYVAKYREQSERCVADVALSVQ+SLR+SKRKSS ISEA  P D+KKLKIWMGKR L    +  DSDEDV DVE ET+KSVLLNSQNESGL KA+DSSDSVTGLKRDG SSGVGSCESGSEEE+E VVEEG+VE+  GS   + TI+A ++ + E M++D+M E NAVPCSE LDSGISAQD   QDNKVD TV Q S++VSSEIV NDMEID SLEHK  VIEESLP+  VP KEEPLNFDAFN+AAELE LGLEKLKTELQ  GLKCGGTLQERAARLFLLKST
Sbjct:    1 MEEEKSHRMYNLFVKHLNGKTLTLLFPSPILYATSIKDRLFHLTGIPIQHQRLVTGCRHLNDDKSAIWCSPEGGNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWREGEEDRKLEKVAEDFLKKQMKKNK-GKGKNGVEGEAQKYVAKYREQSERCVADVALSVQESLRNSKRKSSAISEAPRPRDQKKLKIWMGKRPLDESDNSDDSDEDVKDVEEETEKSVLLNSQNESGLNKADDSSDSVTGLKRDGGSSGVGSCESGSEEERETVVEEGRVETVEGSPQSNETIEAKLSVDAEPMINDDMAEANAVPCSEMLDSGISAQDIVCQDNKVDDTVTQASDLVSSEIVPNDMEIDVSLEHKPAVIEESLPNTVVPAKEEPLNFDAFNTAAELEALGLEKLKTELQSRGLKCGGTLQERAARLFLLKST 457
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BLAST of rna-XM_012714236.2 vs. UniProtKB/TrEMBL
Match: tr|I3T1K9|I3T1K9_MEDTR (Replication stress response regulator SDE2 OS=Medicago truncatula OX=3880 PE=2 SV=1)

HSP 1 Score: 657.907 bits (1696), Expect = 0.000e+0
Identity = 369/457 (80.74%), Postives = 392/457 (85.78%), Query Frame = 0 
Query:   27 MEHEKSQTMYNLFVKHLDGKTLTLLFPSPILYANSIKDRLFQLTGIPIRHQRLVTGCRHLNDDKSAICCSPEDGNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWRAGEEERKLEKVAEEFLKKQMKKNKGKGKNGDVDGEAHKYVAKYREQSERCVADVALSVQDSLRDSKRKSSPISEASLPHDRKKLKIWMGKRTLNESDDSDSDEDVDDVEGETDKSVLLNSQNESGLTKAEDSSDSVTGLKRDGDSSGVGSCESGSEEEKEAVVEEGKVESAGGSQSCDTTIQASVAAEPELMVHDEMMEINAVPCSETLDSGISAQD---QDNKVDGTVAQVSNIVSSEIVANDMEIDGSLEHKTVVIEESLPSISVPVKEEPLNFDAFNSAAELEILGLEKLKTELQLHGLKCGGTLQERAARLFLLKST 480
            ME EKS  M+NLFVKHL+GKTLTLLFPSPIL A SIKDRLF LTGIPI+HQRLVTG RHLNDD S ICCSPE GNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWR GEE+RKLEK AEEFLKKQMKKN  KGK  + D EA KYVAKYREQSERCVA+VA SV DS+R +KRKSSPISE S   D+KKLKIWMGKR LNES D DSD DV D EGET+KSVLLNSQNESGL KAE SSDSV G KRDGDSSGVGSCESGSEEEKE VVE  +VE    SQS + +I+A  +   E MV+DEMME NAVPCSETLDS IS QD   QD++V GT AQVSN+VSSEIV+NDMEIDGSLEHKTVVIEESLPS SVP K+EPLNFDAFNSAAELE+LGLE LKTELQ  GLK GGTLQERAA+LFLLKST
Sbjct:    1 MEQEKSHRMFNLFVKHLNGKTLTLLFPSPILSAASIKDRLFHLTGIPIQHQRLVTGFRHLNDDNSEICCSPEGGNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWREGEEDRKLEKTAEEFLKKQMKKNN-KGKGKNGDVEAQKYVAKYREQSERCVAEVAESVLDSIRYAKRKSSPISEGSPSRDQKKLKIWMGKRALNES-DDDSDGDVTDDEGETEKSVLLNSQNESGLNKAEGSSDSVAGFKRDGDSSGVGSCESGSEEEKETVVEG-EVEIVERSQSTE-SIEAKPSIAAETMVNDEMMEANAVPCSETLDSLISVQDNDYQDSQVGGTGAQVSNVVSSEIVSNDMEIDGSLEHKTVVIEESLPSNSVPAKKEPLNFDAFNSAAELEVLGLENLKTELQSRGLKFGGTLQERAAKLFLLKST 453
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BLAST of rna-XM_012714236.2 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8L3P6|A0A8B8L3P6_ABRPR (Replication stress response regulator SDE2 OS=Abrus precatorius OX=3816 GN=LOC113861918 PE=3 SV=1)

HSP 1 Score: 592.038 bits (1525), Expect = 0.000e+0
Identity = 333/468 (71.15%), Postives = 367/468 (78.42%), Query Frame = 0 
Query:   27 MEHEKSQTMYNLFVKHLDGKTLTLLFPSPILYANSIKDRLFQLTGIPIRHQRLVTGCRHLNDDKSAICCSPEDGNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWRAGEEERKLEKVAEEFLKKQMKKNKGKGKNGDVDGEAHKYVAKYREQSERCVADVALSVQDSLRDSKRKSSPISEASLPHDRKKLKIWMGKRTLNESDDSDSDEDVDDVEGETDKSVLLNSQNESGLTKAEDSSDSVTGLKRDGDSSGVGSCESGSEEEKEAVVEEGKVESAGGSQSCDTTIQASVAAEPELMVHDEMMEINAVPCSETLDSGISAQDQDN---------KVDGTVAQVSNIVSSEIV-----ANDMEIDGSLEHKTVVIEESLPSISVPVKEEPLNFDAFNSAAELEILGLEKLKTELQLHGLKCGGTLQERAARLFLLKST 480
            ME  K   MYNLFVKHLDGKTLTL FPSPIL+ANSIKDRLF+LTGIPI+HQRLVTGCRHLND+KS I CSPEDGN+FPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEW+AGEEER+LEKVAE+FLKKQMKK K        DGEAHKYVAKYRE+SERCVA+VALSV+++L   KRKS   S++SLPHD KK KIWMGKR LNESD   S    DD +GET+KSVLL+ QNES   KAE S  SVTG KRDGDSSG GSCESGSEEEKE V          G QS +     SV AEP  +++DE+ME  A+PC E++ SGI+A+D  N         K  G V+Q SN+  SE V     +NDMEIDGSLEHK  V EES PS S+P  EEPLNFDAFNSAAELE+LGLE LK+ELQ  GLKCGGTLQERAARLFLLKST
Sbjct:    1 MEQNKGNKMYNLFVKHLDGKTLTLTFPSPILHANSIKDRLFELTGIPIQHQRLVTGCRHLNDEKSVIQCSPEDGNIFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWKAGEEERRLEKVAEDFLKKQMKKGKKG----VGDGEAHKYVAKYREESERCVAEVALSVKEAL-SCKRKSP--SQSSLPHDAKKFKIWMGKRKLNESDSDYS---DDDDDGETEKSVLLSGQNESESNKAEGSLGSVTGGKRDGDSSGAGSCESGSEEEKETV----------GLQSSE-----SVVAEP--VINDEIMEATALPCLESVLSGINAEDNGNQDCDGGVADKFVGAVSQASNVTISETVVDASKSNDMEIDGSLEHKAAVHEESSPSTSIPALEEPLNFDAFNSAAELEVLGLETLKSELQSRGLKCGGTLQERAARLFLLKST 441
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BLAST of rna-XM_012714236.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445CPI7|A0A445CPI7_ARAHY (Replication stress response regulator SDE2 OS=Arachis hypogaea OX=3818 GN=Ahy_A06g027663 PE=3 SV=1)

HSP 1 Score: 551.592 bits (1420), Expect = 0.000e+0
Identity = 324/477 (67.92%), Postives = 375/477 (78.62%), Query Frame = 0 
Query:   27 MEHEK-SQTMYNLFVKHLDGKTLTLLFPSPILYANSIKDRLFQLTGIPIRHQRLVTGCRHLNDDKSAICCSPEDGNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWRAGEEERKLEKVAEEFLKKQMKKNKGKGKNGDVDGEAHKYVAKYREQSERCVADVALSVQDSLR--DSKRKSSPISEASLPH-DRKKLKIWMGKRTLNESDDSDSDEDVDDVEGETDKSVLLNSQNESGLTKAEDSSDSVTGLKRDGDSSGVGSCESGSEEEKEAVVEEGKVESAGGSQSCDTTIQASVAAEPELMVHDEMMEINAVPCSETLDSGISAQDQDNK-VDGTVAQVSNIVSSEIVA-----NDMEIDGSLEHKTVVIEESLPSISVPVKEEPLNFDAFNSAAELEILGLEKLKTELQLHGLKCGGTLQERAARLFLLKSTPLDKLPKKLLAKK 493
            M+H   S  MYNLFVKHLDGKTLTL+FPSPIL+A +IKDRLF LTGIP  HQRLVTG RHLND+ SAIC SP+  N+FP+VRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEW+A EEER+LEKVAEEFLKKQMKK K        DGEAHKYVAKYRE+SERCVA+VA SV+++L+  + KRK    SEA+L   D KKLKIWMGKR LNESD  DS  D  D EG   KS++LNSQ ES   KAE SSDSV+  K+ GDSSG GSCESGSEEE+E V+ EGKVE+  GS S + T QA +  + E +V++EM+    +PCSE++ + IS +D  ++  +G V Q S+ +SSE  A     NDMEID SL+HK +V EE  PS S+P  EEPLNF+AFNSAAELE+LG E+LK+ELQ  GLKCGGTLQERAARLFLLKSTPL+K+PKKLLAKK
Sbjct:    4 MDHRNYSGNMYNLFVKHLDGKTLTLIFPSPILFAKTIKDRLFDLTGIPPHHQRLVTGFRHLNDEGSAIC-SPDGSNIFPTVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWKAAEEERRLEKVAEEFLKKQMKKGKKG----AGDGEAHKYVAKYREESERCVAEVAESVKEALKSLNGKRKG---SEAALEKADSKKLKIWMGKRKLNESDSDDS--DESDDEGGNQKSIVLNSQTESDTNKAEGSSDSVSCKKQSGDSSGAGSCESGSEEERETVL-EGKVEAV-GSPSGEAT-QAKLIDDVEPVVYEEMIGAATMPCSESI-TVISVEDNGHQDCNGAVGQASDNLSSENGADASKSNDMEIDESLQHKALVHEEISPSTSIPALEEPLNFEAFNSAAELEVLGFERLKSELQSRGLKCGGTLQERAARLFLLKSTPLEKIPKKLLAKK 466
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BLAST of rna-XM_012714236.2 vs. UniProtKB/TrEMBL
Match: tr|A0A444YL29|A0A444YL29_ARAHY (Replication stress response regulator SDE2 OS=Arachis hypogaea OX=3818 GN=Ahy_B06g081459 PE=3 SV=1)

HSP 1 Score: 550.821 bits (1418), Expect = 0.000e+0
Identity = 322/477 (67.51%), Postives = 371/477 (77.78%), Query Frame = 0 
Query:   27 MEHEK-SQTMYNLFVKHLDGKTLTLLFPSPILYANSIKDRLFQLTGIPIRHQRLVTGCRHLNDDKSAICCSPEDGNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWRAGEEERKLEKVAEEFLKKQMKKNKGKGKNGDVDGEAHKYVAKYREQSERCVADVALSVQDSLR--DSKRKSSPISEASLPH-DRKKLKIWMGKRTLNESDDSDSDEDVDDVEGETDKSVLLNSQNESGLTKAEDSSDSVTGLKRDGDSSGVGSCESGSEEEKEAVVEEGKVESAGGSQSCDTTIQASVAAEPELMVHDEMMEINAVPCSETLDSGISAQDQDNK-VDGTVAQVSNIVSSEIVA-----NDMEIDGSLEHKTVVIEESLPSISVPVKEEPLNFDAFNSAAELEILGLEKLKTELQLHGLKCGGTLQERAARLFLLKSTPLDKLPKKLLAKK 493
            M+H   S  MYNLFVKHLDGKTLTL+FPSPIL+A +IKDRLF LTGIP  HQRLVTG RHLND+ SAIC SP+  N+FP+VRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEW+A EEER+LEKVAE+FLKKQMKK K        DGEAHKYVAKYRE+SERCVA+VA SV+++L+  + KRK    SEA+L   D KKLKIWMGKR LNESD  DS  D  D EG   KS++LNSQ ES   KAE SSDSV+  K+ GDSSG GSCESGSEEE+E V+ EGKVE+ G      T  +   A EP  +V++EMM    +PCSE++ + IS +D  ++  +  V Q S+ +SSE  A     NDMEID SL+HK +V EE  PS S+P  EEPLNF+AFNSAAELE+LGLE+LK+ELQ  GLKCGGTLQERAARLFLLKSTPL+K+PKKLLAKK
Sbjct:    4 MDHRNNSGNMYNLFVKHLDGKTLTLIFPSPILFAKTIKDRLFDLTGIPPHHQRLVTGFRHLNDEGSAIC-SPDGSNIFPTVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWKAAEEERRLEKVAEDFLKKQMKKGKKG----AGDGEAHKYVAKYREESERCVAEVAESVKEALKSLNGKRKG---SEAALEKADSKKLKIWMGKRKLNESDSDDS--DESDDEGGNQKSIVLNSQTESDTNKAEGSSDSVSCKKQSGDSSGAGSCESGSEEERETVL-EGKVEAVGSPSGEATEAKLIDAVEP--VVYEEMMGAATMPCSESI-TVISVEDNGHQDCNAAVGQASDNLSSENWAGASKSNDMEIDESLQHKALVHEEISPSTSIPALEEPLNFEAFNSAAELEVLGLERLKSELQSRGLKCGGTLQERAARLFLLKSTPLEKIPKKLLAKK 466
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BLAST of rna-XM_012714236.2 vs. UniProtKB/TrEMBL
Match: tr|A0A151TY01|A0A151TY01_CAJCA (Replication stress response regulator SDE2 OS=Cajanus cajan OX=3821 GN=KK1_011212 PE=3 SV=1)

HSP 1 Score: 550.821 bits (1418), Expect = 0.000e+0
Identity = 324/472 (68.64%), Postives = 356/472 (75.42%), Query Frame = 0 
Query:   27 MEHEKSQTMYNLFVKHLDGKTLTLLFPSPILYANSIKDRLFQLTGIPIRHQRLVTGCRHLNDDKSAICCSPEDGNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWRAGEEERKLEKVAEEFLKKQMKKNKGKGKNGDVDGEAHKYVAKYREQSERCVADVALSVQDSLRDSKRKSSPISEASLPH-DRKKLKIWMGKRTLNESDDSDSDEDVDDVEGETDKSVLLNSQNESGLTKAEDSSDSVTGLKRDGDSSGVGSCESGSEEEKEAVVEEGKVESAGGSQSCDTTIQASVAAEPELMVHDEMMEINAVPCSETLDSGISAQD---QD------NKVDGTVAQV---SNIVSSEIVA-----NDMEIDGSLEHKTVVIEESLPSISVPVKEEPLNFDAFNSAAELEILGLEKLKTELQLHGLKCGGTLQERAARLFLLKST 480
            ME  +S+ MYNLFVKHLDGKTLTLLFPSPILYANSIKDRLF+LTGIP +HQRLVTG RHLND+KSAI CSPEDGNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEW+AGEEERKLEKVAEEFLKKQMKK KGKG       EAHKYVAKYRE+SERCVA+VALSV++ L  +KRK       S PH D K+LKIWMGKR LNESD      DV D EGET+KS LL+ QNESG  K + S DSVTG        G  SCESGSEEEKE  V +GKV          T    SV AEP  +V D+     A+P  E++ +G++A++   QD      +K DG + Q    SN V SE VA     NDMEIDGSLEHK  V EES PS SVP  EEPLNFDAFN+AAELE+LGLE+LK+ELQ  GLKCGGTLQERA RLFLLKST
Sbjct:    1 MEQNRSKKMYNLFVKHLDGKTLTLLFPSPILYANSIKDRLFELTGIPAQHQRLVTGFRHLNDEKSAIQCSPEDGNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWKAGEEERKLEKVAEEFLKKQMKKGKGKGDG-----EAHKYVAKYREESERCVAEVALSVKEVL-TAKRKG-----PSQPHNDAKRLKIWMGKRKLNESDS-----DVSDEEGETEKSDLLDGQNESGANKGDGSLDSVTG--------GGVSCESGSEEEKEYAV-QGKVSGE------STQAGLSVVAEP--VVSDKA---TAMP-KESVVAGLNAEENRYQDCRGGVSDKFDGALNQTSNASNTVGSENVASAGESNDMEIDGSLEHKVAVNEESSPSTSVPTLEEPLNFDAFNAAAELEVLGLERLKSELQSRGLKCGGTLQERAVRLFLLKST 435
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BLAST of rna-XM_012714236.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445LH89|A0A445LH89_GLYSO (Replication stress response regulator SDE2 OS=Glycine soja OX=3848 GN=D0Y65_008249 PE=3 SV=1)

HSP 1 Score: 536.954 bits (1382), Expect = 0.000e+0
Identity = 337/485 (69.48%), Postives = 373/485 (76.91%), Query Frame = 0 
Query:   27 MEHEKSQT-MYNLFVKHLDGKTLTLLFPSPILYANSIKDRLFQLTGIPIRHQRLVTGCRHLNDDKSAICCSPEDGNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWRAGEEERKLEKVAEEFLKKQMKKNKGKGKNGDVDGEAHKYVAKYREQSERCVADVALSVQDSLRDSKRKSSPISEASLP-HDRKKLKIWMGKRTLNESDDSDSDEDVDDVEGETDKSVLLNSQNESGLTKAEDSSDSVTGLKRDGDSSGVGSCESGSEEEKEAVVEE--GKVESAGGSQSCDTTIQASVAAEPELMVHDEMMEINAVPCSETLDSGISAQD---QD------NKVDGTVAQVSNIVSSEIVA-----NDMEIDGSLEHKTVVIEESLPSISVPVKEEPLNFDAFNSAAELEILGLEKLKTELQLHGLKCGGTLQERAARLFLLKSTPLDKLPKKLLAKK 493
            ME ++S + MYNLFVKHLDGKTLTLLFPSPILYA+SI+DRLFQLTGIP  HQRLVTGCRHLNDDKSAI C PEDGNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEW+AGE+ERKLEKVAEEFLKKQMKK K     G+ +G A KYVAKYRE+SERCVA+VALSV+++L  +KRKS      S P HD KKLKIWMGKR LNESD  DSDE+V     E +KS LLN  NESG  KAE S  SV G      +    SCESGSEEEKEA VE   G V   GG      +IQA  AAEP  +++DE  E+      E++ +GI+A+D   QD      +K DG V Q S ++ SE VA     N MEIDGSLEHK  V EES PS SVPV EEPLNFDAFNSAAELE+LGLE+LK+ELQ  GLKCGGTL+ERAARLFLLKSTPLD+LPKKLLAKK
Sbjct:    1 MEQKRSSSKMYNLFVKHLDGKTLTLLFPSPILYASSIRDRLFQLTGIPAHHQRLVTGCRHLNDDKSAIQCLPEDGNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWKAGEQERKLEKVAEEFLKKQMKKGK---GKGEGEGGAQKYVAKYREESERCVAEVALSVKEAL-TAKRKSP-----SQPHHDAKKLKIWMGKRKLNESDSDDSDEEV-----EIEKSDLLNGPNESGSNKAEGSLGSVNGGGGSSGAG---SCESGSEEEKEAAVEGNVGSVAMLGGE-----SIQA--AAEP--VINDEATEMP----KESVVAGINAEDNGYQDCYVGVPDKFDGAVNQASTVMGSETVASAGESNYMEIDGSLEHKAAVNEESSPSTSVPVLEEPLNFDAFNSAAELEVLGLERLKSELQSRGLKCGGTLKERAARLFLLKSTPLDELPKKLLAKK 455
The following BLAST results are available for this feature:
BLAST of rna-XM_012714236.2 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11)
Total hits: 4
Match NameE-valueIdentityDescription
|3.311e-10044.86Symbols: no symbol available | no full name availa... [more]
|3.311e-10044.86Symbols: no symbol available | no full name availa... [more]
|1.479e-1673.58Symbols: no symbol available | no full name availa... [more]
|7.362e-1046.05Symbols: ATO | ATROPOS | chr5:1862623-1866298 REVE... [more]
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BLAST of rna-XM_012714236.2 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot)
Total hits: 7
Match NameE-valueIdentityDescription
sp|Q8K1J5|SDE2_MOUSE5.852e-1259.68Splicing regulator SDE2 OS=Mus musculus OX=10090 G... [more]
sp|Q7T293|SDE2_DANRE3.309e-1140.57Splicing regulator SDE2 OS=Danio rerio OX=7955 GN=... [more]
sp|Q9FG01|ATO_ARATH7.248e-946.05Splicing factor SF3a60 homolog OS=Arabidopsis thal... [more]
sp|Q9D554|SF3A3_MOUSE6.225e-853.33Splicing factor 3A subunit 3 OS=Mus musculus OX=10... [more]
sp|Q12874|SF3A3_HUMAN6.618e-853.33Splicing factor 3A subunit 3 OS=Homo sapiens OX=96... [more]
sp|Q07G43|SDE2_XENTR4.156e-751.25Splicing regulator SDE2 OS=Xenopus tropicalis OX=8... [more]
sp|O14113|SDE2_SCHPO9.727e-736.67Splicing regulator sde2 OS=Schizosaccharomyces pom... [more]
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BLAST of rna-XM_012714236.2 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S3E1S0|A0A1S3E1S0_CICAR0.000e+0100.00Replication stress response regulator SDE2 OS=Cice... [more]
tr|A0A2K3NSI7|A0A2K3NSI7_TRIPR0.000e+084.30Replication stress response regulator SDE2 OS=Trif... [more]
tr|G7L437|G7L437_MEDTR0.000e+080.96Replication stress response regulator SDE2 OS=Medi... [more]
tr|A0A9D5AVV0|A0A9D5AVV0_PEA0.000e+081.00Replication stress response regulator SDE2 OS=Pisu... [more]
tr|I3T1K9|I3T1K9_MEDTR0.000e+080.74Replication stress response regulator SDE2 OS=Medi... [more]
tr|A0A8B8L3P6|A0A8B8L3P6_ABRPR0.000e+071.15Replication stress response regulator SDE2 OS=Abru... [more]
tr|A0A445CPI7|A0A445CPI7_ARAHY0.000e+067.92Replication stress response regulator SDE2 OS=Arac... [more]
tr|A0A444YL29|A0A444YL29_ARAHY0.000e+067.51Replication stress response regulator SDE2 OS=Arac... [more]
tr|A0A151TY01|A0A151TY01_CAJCA0.000e+068.64Replication stress response regulator SDE2 OS=Caja... [more]
tr|A0A445LH89|A0A445LH89_GLYSO0.000e+069.48Replication stress response regulator SDE2 OS=Glyc... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024974Sde2, N-terminal ubiquitin domainPFAMPF13019Sde2_N_Ubicoord: 85..179
e-value: 1.5E-24
score: 98.2
NoneNo IPR availableGENE3D3.10.20.90coord: 27..117
e-value: 3.8E-8
score: 35.1
NoneNo IPR availablePANTHERPTHR12786SPLICING FACTOR SF3A-RELATEDcoord: 35..492
NoneNo IPR availableCDDcd17039Ubl_ubiquitin_likecoord: 38..103
e-value: 1.47305E-6
score: 43.739
IPR025086SDE2-like, C-terminal domainPFAMPF13297SDE2_2Ccoord: 428..492
e-value: 6.6E-23
score: 91.7
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 20..102

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_012714236.2_CaCDCfrontier-NCBI_v1 ID=rna-XM_012714236.2_CaCDCfrontier-NCBI_v1; Name=rna-XM_012714236.2; organism=Cicer arietinum; type=mRNA; length=1482bp
ATGTATTCATTCCTTCATTCTGTCGAAACTCGAATTCCCCAAAACCCTAA
TTTCGGAAAAATTTCCCCAAATTCGACAATGGAACATGAGAAGAGCCAAA
CGATGTACAACCTGTTCGTGAAGCACTTAGACGGTAAAACCCTAACCCTA
TTATTCCCTTCTCCGATCCTTTACGCCAATTCCATTAAGGATCGTCTCTT
CCAACTCACCGGAATCCCAATCCGACACCAACGTCTCGTCACCGGTTGCC
GCCACCTCAACGACGATAAATCGGCAATATGTTGTTCGCCGGAAGATGGG
AACATGTTCCCCTCGGTACGGCTGCTTCTCCGTCTGAAAGGCGGGAAAGG
AGGATTCGGATCGCTGCTTCGTGGAGCGGCAACGAAAGCAGGGCAGAAGA
AGACGAACAATTTCGACGCGTGTAGAGATATGAGTGGGCGAAGGTTGAGA
CACGTTAACGCGGAGAAGAGGTTGGAGGAATGGAGAGCCGGTGAAGAAGA
GAGAAAGCTCGAGAAAGTTGCGGAAGAGTTTTTGAAGAAACAGATGAAGA
AGAATAAGGGTAAGGGTAAGAATGGTGATGTTGACGGTGAGGCTCATAAG
TATGTTGCCAAATATAGGGAACAATCTGAACGATGTGTTGCGGATGTTGC
TTTGTCTGTACAAGATTCTCTCAGAGATTCTAAGCGCAAGTCTTCACCGA
TATCAGAAGCTTCTCTTCCACATGATCGCAAGAAGTTGAAGATATGGATG
GGGAAGAGGACATTGAATGAAAGTGATGATTCCGATTCTGATGAAGATGT
TGATGATGTTGAGGGGGAAACTGATAAATCTGTTTTGTTAAATAGTCAGA
ATGAGTCTGGGTTAACTAAGGCTGAAGATAGTTCTGATTCTGTGACTGGT
TTAAAGCGGGATGGAGACTCTTCTGGGGTCGGCTCGTGTGAGAGTGGATC
TGAAGAAGAGAAGGAAGCTGTTGTAGAAGAAGGCAAAGTGGAATCTGCTG
GAGGATCCCAGAGTTGTGATACTACTATTCAGGCCAGTGTTGCTGCTGAA
CCTGAACTCATGGTACATGATGAGATGATGGAGATTAATGCTGTGCCTTG
TTCAGAGACGTTGGATTCTGGAATTAGTGCTCAAGATCAGGATAACAAAG
TTGATGGCACTGTTGCTCAAGTCTCAAATATTGTGAGCTCTGAAATTGTG
GCCAATGACATGGAAATTGATGGTTCTCTTGAGCATAAAACAGTGGTCAT
TGAAGAAAGCTTGCCAAGCATTAGTGTCCCAGTGAAGGAGGAGCCTTTGA
ATTTTGATGCTTTTAATTCAGCTGCTGAACTTGAGATTCTTGGCTTGGAA
AAGTTGAAGACTGAACTCCAGTTGCATGGGTTAAAATGTGGTGGTACTTT
GCAGGAGCGTGCTGCTAGGCTTTTTCTTTTAAAATCGACTCCCCTGGATA
AACTTCCAAAGAAACTGCTAGCAAAGAAATAA
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protein sequence of rna-XM_012714236.2_CaCDCfrontier-NCBI_v1

>rna-XM_012714236.2_CaCDCfrontier-NCBI_v1 ID=rna-XM_012714236.2_CaCDCfrontier-NCBI_v1; Name=rna-XM_012714236.2_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=493bp
MYSFLHSVETRIPQNPNFGKISPNSTMEHEKSQTMYNLFVKHLDGKTLTL
LFPSPILYANSIKDRLFQLTGIPIRHQRLVTGCRHLNDDKSAICCSPEDG
NMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLR
HVNAEKRLEEWRAGEEERKLEKVAEEFLKKQMKKNKGKGKNGDVDGEAHK
YVAKYREQSERCVADVALSVQDSLRDSKRKSSPISEASLPHDRKKLKIWM
GKRTLNESDDSDSDEDVDDVEGETDKSVLLNSQNESGLTKAEDSSDSVTG
LKRDGDSSGVGSCESGSEEEKEAVVEEGKVESAGGSQSCDTTIQASVAAE
PELMVHDEMMEINAVPCSETLDSGISAQDQDNKVDGTVAQVSNIVSSEIV
ANDMEIDGSLEHKTVVIEESLPSISVPVKEEPLNFDAFNSAAELEILGLE
KLKTELQLHGLKCGGTLQERAARLFLLKSTPLDKLPKKLLAKK
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mRNA from alignment at chr3:39439995..39442683+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_012714236.2_CaCDCfrontier-NCBI_v1 ID=rna-XM_012714236.2_CaCDCfrontier-NCBI_v1; Name=rna-XM_012714236.2; organism=Cicer arietinum; type=mRNA; length=2689bp; location=Sequence derived from: chr3:39439995..39442683+ (Cicer arietinum
CCATCTATTCATTCCTCTATTCAACCTGAGACCGACTTGGTTTCATGTAT
TCATTCCTTCATTCTGTCGAAACTCGAATTCCCCAAAACCCTAATTTCGG
AAAAATTTCCCCAAATTCGACAATGGAACATGAGAAGAGCCAAACGATGT
ACAACCTGTTCGTGAAGCACTTAGACGGTAAAACCCTAACCCTATTATTC
CCTTCTCCGATCCTTTACGCCAATTCCATTAAGGATCGTCTCTTCCAACT
CACCGGAATCCCAATCCGACACCAACGTCTCGTCACCGGTTGCCGCCACC
TCAACGACGATAAATCGGCAATATGTTGTTCGCCGGAAGATGGGAACATG
TTCCCCTCGGTACGGCTGCTTCTCCGTCTGAAAGGCGGGAAAGGAGGATT
CGGATCGCTGCTTCGTGGAGCGGCAACGAAAGCAGGGCAGAAGAAGACGA
ACAATTTCGACGCGTGTAGAGATATGAGTGGGCGAAGGTTGAGACACGTT
AACGCGGAGAAGAGGTTGGAGGAATGGAGAGCCGGTGAAGAAGAGAGAAA
GCTCGAGAAAGTTGCGGAAGAGTTTTTGAAGAAACAGATGAAGAAGAATA
AGGGTAAGGGTAAGAATGGTGATGTTGACGGTGAGGCTCATAAGTATGTT
GCCAAATATAGGGAACAATCTGAACGATGTGTTGCGGATGTTGCTTTGTC
TGTACAAGATTCTCTCAGAGATTCTAAGCGCAAGTCTTCACCGATATCAG
AAGCTTCTCTTCCACATGATCGCAAGAAGTTGAAGATATGGTAAGATATC
TCATcttagttttgtttttgtttttgtttttgtcaatCAGAGTAAATAGC
CAAATTAGTCATTGAAATTGTGGGTCTGTTTCAAACTTTCAATCTAATCC
ATCACATTATTGTTgatattccaaaatgatctcATAAATtgcaaaatttt
aatcaaattcgtcTGTCTGTTAATATTTTAGGTACTAGAATGGCATTAAG
CCGATAATATTGGGATGATTATGAATAATGTCTGAGATGCATTTGATTAC
AAATCCACGGGTTGAGGGAGGATGTGATTAATttttgatcattttggaat
attgATAATGTCAGGGTCTAGGTTGATACAACCCTATAATTTCTAGGACC
AAGTTGAATATTTTCTATCTCAACTATTATATAGTATTACGAAGGCAATG
GTttgcaaaataatttattatgaatttttaatgTGTTTGTTTTGAGTTAA
TTGTTGTATTTTATGGAttagtatttgtatttattCTGTGCTGGTTTGGA
TTTTCTAGGATGGGGAAGAGGACATTGAATGAAAGTGATGATTCCGATTC
tgatgaagatgttgatgaTGTTGAGGGGGAAACTGATAAATCTGTTTTGT
TAAATAGTCAGAATGAGTCTGGGTTAACTAAGGCTGAAGATAGTTCTGAT
TCTGTGACTGGTTTAAAGCGGGATGGAGACTCTTCTGGGGTCGGCTCGTG
TGAGAGTGGATCTGAAGAAGAGAAGGAAGCTGTTGTAGAAGAAGGCAAAG
TGGAATCTGCTGGAGGATCCCAGAGTTGTGATACTACTATTCAGGCCAGT
GTTGCTGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAACCTGA
ACTCATGGTACATGATGAGATGATGGAGATTAATGCTGTGCCTTGTTCAG
AGACGTTGGATTCTGGAATTAGTGCTCAAGATCAGGATAACAAAGTTGAT
GGCACTGTTGCTCAAGTCTCAAATATTGTGAGCTCTGAAATTGTGGCCAA
TGACATGGAAATTGATGGTTCTCTTGAGCATAAAACAGTGGTCATTGAAG
AAAGCTTGCCAAGCATTAGTGTCCCAGTGAAGGAGGAGCCTTTGAATTTT
GATGCTTTTAATTCAGCTGCTGAACTTGAGGTATAATTCAAAACATAGCG
ATGGTTCTGTGGTGTTCTACACTTTGATATGTTTATGTGCTTTACTTAAT
TATACCAATGTAGCTTTTATGCAAAACTTCAggaaactattatttttaga
aatccACCGAAATTTATGTTCATATAACttattgaatataatatttatgt
ggTGAACTTGTTGTTTTAGACATGCGTGATTAGATAAAAGATAAGTCATC
TCATTTATTGACTAGATCCACTAGTCATGTACTATTTATTAGGCTCTGAA
GTCTGATGCGTTTTCCATTTTCATAGATTCTTGGCTTGGAAAAGTTGAAG
ACTGAACTCCAGTTGCATGGGTTAAAATGTGGTGGTACTTTGCAGGAGCG
TGCTGCTAggctttttcttttaaaatcgACTCCCCTGGATAAACTTCCAA
AGAAACTGCtagcaaagaaataaaaagcatTTTGATATGCATCTATCATC
TGTGGAGCAGTTCCTTCTCTGTACAGTATCTTATAACTGATCATACGTTT
TTGTTTGGCAGTTAATTGTGTCTTGGGTTGCGGAACAGACTAATGCCTGC
ATTTTCTGTTCGTTATGTTTTCACTGTTGGCTGTATTTGATGCAATAATA
CAATACTGTTACCAAACCGTCAAAGGAAGCTGGACTATGTATAATTCAAG
TCTTATTTTGCATTatgaacaatttcaattttgctTTTA
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Coding sequence (CDS) from alignment at chr3:39439995..39442683+

>rna-XM_012714236.2_CaCDCfrontier-NCBI_v1 ID=rna-XM_012714236.2_CaCDCfrontier-NCBI_v1; Name=rna-XM_012714236.2; organism=Cicer arietinum; type=CDS; length=1482bp; location=Sequence derived from: chr3:39439995..39442683+ (Cicer arietinum
ATGTATTCATTCCTTCATTCTGTCGAAACTCGAATTCCCCAAAACCCTAA
TTTCGGAAAAATTTCCCCAAATTCGACAATGGAACATGAGAAGAGCCAAA
CGATGTACAACCTGTTCGTGAAGCACTTAGACGGTAAAACCCTAACCCTA
TTATTCCCTTCTCCGATCCTTTACGCCAATTCCATTAAGGATCGTCTCTT
CCAACTCACCGGAATCCCAATCCGACACCAACGTCTCGTCACCGGTTGCC
GCCACCTCAACGACGATAAATCGGCAATATGTTGTTCGCCGGAAGATGGG
AACATGTTCCCCTCGGTACGGCTGCTTCTCCGTCTGAAAGGCGGGAAAGG
AGGATTCGGATCGCTGCTTCGTGGAGCGGCAACGAAAGCAGGGCAGAAGA
AGACGAACAATTTCGACGCGTGTAGAGATATGAGTGGGCGAAGGTTGAGA
CACGTTAACGCGGAGAAGAGGTTGGAGGAATGGAGAGCCGGTGAAGAAGA
GAGAAAGCTCGAGAAAGTTGCGGAAGAGTTTTTGAAGAAACAGATGAAGA
AGAATAAGGGTAAGGGTAAGAATGGTGATGTTGACGGTGAGGCTCATAAG
TATGTTGCCAAATATAGGGAACAATCTGAACGATGTGTTGCGGATGTTGC
TTTGTCTGTACAAGATTCTCTCAGAGATTCTAAGCGCAAGTCTTCACCGA
TATCAGAAGCTTCTCTTCCACATGATCGCAAGAAGTTGAAGATATGGATG
GGGAAGAGGACATTGAATGAAAGTGATGATTCCGATTCtgatgaagatgt
tgatgaTGTTGAGGGGGAAACTGATAAATCTGTTTTGTTAAATAGTCAGA
ATGAGTCTGGGTTAACTAAGGCTGAAGATAGTTCTGATTCTGTGACTGGT
TTAAAGCGGGATGGAGACTCTTCTGGGGTCGGCTCGTGTGAGAGTGGATC
TGAAGAAGAGAAGGAAGCTGTTGTAGAAGAAGGCAAAGTGGAATCTGCTG
GAGGATCCCAGAGTTGTGATACTACTATTCAGGCCAGTGTTGCTGCTGAA
CCTGAACTCATGGTACATGATGAGATGATGGAGATTAATGCTGTGCCTTG
TTCAGAGACGTTGGATTCTGGAATTAGTGCTCAAGATCAGGATAACAAAG
TTGATGGCACTGTTGCTCAAGTCTCAAATATTGTGAGCTCTGAAATTGTG
GCCAATGACATGGAAATTGATGGTTCTCTTGAGCATAAAACAGTGGTCAT
TGAAGAAAGCTTGCCAAGCATTAGTGTCCCAGTGAAGGAGGAGCCTTTGA
ATTTTGATGCTTTTAATTCAGCTGCTGAACTTGAGATTCTTGGCTTGGAA
AAGTTGAAGACTGAACTCCAGTTGCATGGGTTAAAATGTGGTGGTACTTT
GCAGGAGCGTGCTGCTAggctttttcttttaaaatcgACTCCCCTGGATA
AACTTCCAAAGAAACTGCtagcaaagaaataa
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR024974Sde2_N
IPR025086SDE2/SF3A3_SAP
IPR029071Ubiquitin-like_domsf