rna-XM_014640829.2

Transcript Overview
Namerna-XM_014640829.2
Unique Namerna-XM_014640829.2_VrVC1973A-SNU_v1
TypemRNA
OrganismVigna radiata (Mung bean, green gram)
Sequence length1233
Productpre-mRNA-splicing factor 18
References
External references for this mRNA
DatabaseAccession
GeneID106757960
GenbankXM_014640829.2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr03chromosomechr03:1314893..1319232 +Vigna radiata cv. VC1973A genome v6.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
anvrvL0641Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0763Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL1078Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL1141Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cavrvL194Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavrvL293Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavrvL297Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvrvL0357Cajanus cajan Asha genome v1.0Cajanus cajan
ccvrvL0594Cajanus cajan Asha genome v1.0Cajanus cajan
ccvrvL0768Cajanus cajan Asha genome v1.0Cajanus cajan
psvrvL181Pisum sativum Cameor genome v1aPisum sativum
pvvrvL023Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvrvL500Pisum sativum Cameor genome v1aPisum sativum
pvvrvL542Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvrvL546Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvrvL343Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL348Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL561Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL566Vicia faba cv. Tiffany genome v1.0Vicia faba
vrvvrvR142Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvL357Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvssR301Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR324Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR343Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvrvL568Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvrvL571Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuaR219Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvvuR239Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvzwsR260Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuaR244Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvzwsR284Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuR263Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuR267Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvrvL177Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvrvL264Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvrvL268Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvrvL271Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL283Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL345Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ccavrvL217Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL220Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL305Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vrvvumR257Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR268Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR285Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvvaR279Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR280Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR316Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvstR256Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR267Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR270Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvrvL350Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL552Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL564Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvrvL019Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL501Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL505Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vrvvunR228Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vrvvunR249Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vrvvunR253Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr01.993Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
XM_058882033.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vigun01g134700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Tiffany.R1.5g096240.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-XM_004493617.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-TanjilR_01949Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Ca_07384Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vum_04G02138.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Cc_v2.0_07514.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vfaba.Hedin2.R1.5g119840.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigst.04G189400.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
evm.model.Chr01.1313Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Psat03G0219800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Va03G069050.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigan.04G300200.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-KK1_009921Cajanus cajan Asha genome v1.0Cajanus cajan
Psat3g064000.1Pisum sativum Cameor genome v1aPisum sativum
Vigun01g134700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
jg32690.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC106757960gene-LOC106757960_VrVC1973A-SNU_v1Vigna radiatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_014640829.2-1exon-XM_014640829.2-1_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014640829.2-2exon-XM_014640829.2-2_VrVC1973A-SNU_v1Vigna radiataexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_014496315.1cds-XP_014496315.1_VrVC1973A-SNU_v1Vigna radiataCDS
cds-XP_014496315.1cds-XP_014496315.1_VrVC1973A-SNU_v1_2Vigna radiataCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_014640829.2_VrVC1973A-SNU_v1rna-XM_014640829.2_VrVC1973A-SNU_v1Vigna radiatapolypeptide
rna-XM_014640829.2_VrVC1973A-SNU_v1rna-XM_014640829.2_VrVC1973A-SNU_v1-proteinVigna radiatapolypeptide


Homology
[Close]
BLAST of rna-XM_014640829.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q99633|PRP18_HUMAN (Pre-mRNA-splicing factor 18 OS=Homo sapiens OX=9606 GN=PRPF18 PE=1 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 6.983e-66
Identity = 140/385 (36.36%), Postives = 213/385 (55.32%), Query Frame = 0 
Query:    1 MDLLKQELLKKRQSLAQDTG----GKRFFKRSEIQQKEIQKLREQEKRELEAKSQ-KRQATSSDPATAAPTSSNTASASSSSAVAAASTSLTDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKHVLKAGVFEV-DSDMTEGQTNDFLRDIAELRKRQKTGIMGERKRQKPDDGATED----REGGGGDDDLSEGGSSGADADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELHEKPESEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSL 375
            MD+LK E+L+KRQ L +D       K++FKRSE+ +KE +   E+   +++ K + ++  TSS+P      +                           + L + EVIRRLR   +P+ LFGE D     RL+ +      E+   ++ +G  ND    + ++ ++    I+G    Q+P +  T++     E     ++L   G S    D D K M          D I  F K LL  W +EL+ + +  KR+ +GK   AT KQ   YL PLF+  RK+ LP DI++++  +++  ++R+Y+ A D Y+++AIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+Q +KRLMT CQ+ +PT PSK VE+N+L
Sbjct:    1 MDILKSEILRKRQ-LVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKIQPKEEDQKPLTSSNPVLELELAEEKLP----------------------MTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKI------EILTPEVNKGLRNDLKAALDKIDQQYLNEIVGG---QEPGEEDTQNDLKVHEENTTIEELEALGESLGKGD-DHKDM----------DIITKFLKFLLGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL 342
[Close]
BLAST of rna-XM_014640829.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q5RE03|PRP18_PONAB (Pre-mRNA-splicing factor 18 OS=Pongo abelii OX=9601 GN=PRPF18 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 9.942e-66
Identity = 140/385 (36.36%), Postives = 212/385 (55.06%), Query Frame = 0 
Query:    1 MDLLKQELLKKRQSLAQDTG----GKRFFKRSEIQQKEIQKLREQEKRELEAKSQ-KRQATSSDPATAAPTSSNTASASSSSAVAAASTSLTDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKHVLKAGVFEV-DSDMTEGQTNDFLRDIAELRKRQKTGIMGERKRQKPDDGATED----REGGGGDDDLSEGGSSGADADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELHEKPESEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSL 375
            MD+LK E+L+KRQ L +D       K++FKRSE+ +KE +   E+    ++ K + ++  TSS+P      +                           + L + EVIRRLR   +P+ LFGE D     RL+ +      E+   ++ +G  ND    + ++ ++    I+G    Q+P +  T++     E     ++L   G S    D D K M          D I  F K LL  W +EL+ + +  KR+ +GK   AT KQ   YL PLF+  RK+ LP DI++++  +++  ++R+Y+ A D Y+++AIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+Q +KRLMT CQ+ +PT PSK VE+N+L
Sbjct:    1 MDILKSEILRKRQ-LVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYRIQPKEEDQKPLTSSNPVLELELAEEKLP----------------------MTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKI------EILTPEVNKGLRNDLKAALDKIDQQYLNEIVGG---QEPGEEDTQNDLKVHEENTTIEELEALGESLGKGD-DHKDM----------DIITKFLKFLLGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL 342
[Close]
BLAST of rna-XM_014640829.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q8BM39|PRP18_MOUSE (Pre-mRNA-splicing factor 18 OS=Mus musculus OX=10090 GN=Prpf18 PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.130e-65
Identity = 140/385 (36.36%), Postives = 212/385 (55.06%), Query Frame = 0 
Query:    1 MDLLKQELLKKRQSLAQDTG----GKRFFKRSEIQQKEIQKLREQEKRELEAKSQ-KRQATSSDPATAAPTSSNTASASSSSAVAAASTSLTDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKHVLKAGVFEV-DSDMTEGQTNDFLRDIAELRKRQKTGIMGERKRQKPDDGATED----REGGGGDDDLSEGGSSGADADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELHEKPESEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSL 375
            MD+LK E+L+KRQ L +D       K++FKRSE+ +KE +   E+   +++ K   ++  TSS+P      +                           + L + EVIRRLR   +P+ LFGE D     RL+ +      E+   ++ +G  ND    + ++ ++    I+G    Q+P +  T++     E     ++L   G S    D D K M          D I  F K LL  W +EL+ + +  KR+ +GK   AT KQ   YL PLF+  RK+ LP DI++++  +++  ++R+Y+ A D Y+++AIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+Q +KRLMT CQ+ +PT PSK VE+N+L
Sbjct:    1 MDILKSEILRKRQ-LVEDRNLLVENKKYFKRSELARKEEEAYYERCGYKIQPKEDDQKPLTSSNPVLELELAEEKLP----------------------MTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKI------EILTPEVNKGLRNDLKAALDKIDQQYLNEIVGG---QEPGEEDTQNDLKVHEENTTIEELEALGESLGKGD-DHKDM----------DIITKFLKFLLGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL 342
[Close]
BLAST of rna-XM_014640829.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9JKB8|PRP18_RAT (Pre-mRNA-splicing factor 18 OS=Rattus norvegicus OX=10116 GN=Prpf18 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.550e-65
Identity = 144/384 (37.50%), Postives = 208/384 (54.17%), Query Frame = 0 
Query:    1 MDLLKQELLKKRQSLAQDTG----GKRFFKRSEIQQKEIQKLREQEKRELEAKSQKRQATSSDPATAAPTSSNTASASSSSAVAAASTSLTDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKHVLKAGVFEV-DSDMTEGQTNDFLRDIAELRKRQKTGIMGERKRQKPDDGATED----REGGGGDDDLSEGGSSGADADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELHEKPESEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSL 375
            MD+LK E+L+KRQ L +D       K++FKRSE+ +KE       E+   E    K Q    D      TSSN       +      T            L + EVIRRLR   +P+ LFGE D     RL+ +      E+   ++ +G  ND    + ++ ++    I+G    Q+P +  T++     E     ++L   G S    D D K M          D I  F K LL  W +EL+ + +  KR+ +GK   AT KQ   YL PLF+  RK+ LP DI++++  +++  ++R+Y+ A D Y+++AIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+Q +KRLMT CQ+ +PT PSK VE+N+L
Sbjct:    1 MDILKSEILRKRQ-LVEDRNLLVENKKYFKRSELAKKE-------EEAYFERCGYKVQPKEDDQKPL--TSSNPVLELELAEEKLPMT------------LSRQEVIRRLRERGEPMRLFGETDYDAFQRLRKI------EILTPEVNKGLRNDLKAALDKIDQQYLNEIVGG---QEPGEEDTQNDLKVHEENTTIEELEALGESLGKGD-DHKDM----------DIITKFLKFLLGVWAKELNSREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL 342
[Close]
BLAST of rna-XM_014640829.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q2HJ41|PRP18_BOVIN (Pre-mRNA-splicing factor 18 OS=Bos taurus OX=9913 GN=PRPF18 PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.478e-65
Identity = 139/385 (36.10%), Postives = 213/385 (55.32%), Query Frame = 0 
Query:    1 MDLLKQELLKKRQSLAQDTG----GKRFFKRSEIQQKEIQKLREQEKRELEAKSQ-KRQATSSDPATAAPTSSNTASASSSSAVAAASTSLTDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKHVLKAGVFEV-DSDMTEGQTNDFLRDIAELRKRQKTGIMGERKRQKPDDGATED----REGGGGDDDLSEGGSSGADADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELHEKPESEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSL 375
            MD+LK E+L+KRQ L +D       K++FKRSE+ +KE +   E+   +++ K + ++  TSS+P      +                           + L + EVIRRLR   +P+ LFGE D     RL+ +      E+   ++ +G  ND    + ++ ++    ++G    Q+P +  T++     E     ++L   G S    D D K M          D I  F K LL  W +EL+ + +  KR+ +GK   AT KQ   YL PLF+  RK+ LP DI++++  +++  ++R+Y+ A D Y+++AIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+Q +KRLMT CQ+ +PT PSK VE+N+L
Sbjct:    1 MDVLKSEILRKRQ-LVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKIQPKDEDQKPLTSSNPVLELELAEEKLP----------------------MTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKI------EILTPEVNKGLRNDLKAALDKIDQQYLNELVGG---QEPGEEDTQNDLKVHEENTTIEELEALGESLGKGD-DHKDM----------DIITKFLKFLLGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL 342
[Close]
BLAST of rna-XM_014640829.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q6GMH0|PRP18_DANRE (Pre-mRNA-splicing factor 18 OS=Danio rerio OX=7955 GN=prpf18 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 4.691e-61
Identity = 132/380 (34.74%), Postives = 207/380 (54.47%), Query Frame = 0 
Query:    1 MDLLKQELLKKRQSLAQDT---GGKRFFKRSEIQQKEIQKLREQEKRELEAKSQKRQATSSD-PATAAPTSSNTASASSSSAVAAASTSLTDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKHVLKAGVFEVDS-DMTEGQTNDFLRDIAELRKRQKTGIMGERKRQKPDDGATEDREGGGGDDDLSEGGSSGADADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELHEKPESEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSL 375
            MD+LK E+ +KR+ + +       K++FKR+E+ +KE            E    +R     D P   AP S+ +A+      +      +T         L + EVIRRLR   +P+ LFGE D     RL+ +      E+ + ++ +G  ND    + ++ ++    I+G  +  + D     D +    +  + E  + GA           N  ++ D D I    + LL  W ++L+ + +  KR+ +GK   AT KQ   YL PLF+  RKK LP DI++++  +++  ++R+Y+ A D Y+++AIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+Q +KRLMT CQ+ +PT PSK VE+N+L
Sbjct:    1 MDILKAEIARKRKLIEEKELIDDSKKYFKRAELARKE------------EEDYYRRCGYKMDKPEEEAPQST-SANPVLELELTEEKLPMT---------LSRQEVIRRLRERGEPIRLFGESDYDAFQRLRKI------EILAPEVNKGLRNDLKAAMDKIDQQYLNEIVGGAEGAELD--TQHDLKVHEENTTIEELEALGASL--------GNGNDVRDMDIINKVLRFLLGVWAKDLNSREDHIKRSVQGKLASATQKQTESYLEPLFRKLRKKNLPADIKESITDIIKFMLEREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL 342
[Close]
BLAST of rna-XM_014640829.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q5EAV6|PRP18_XENLA (Pre-mRNA-splicing factor 18 OS=Xenopus laevis OX=8355 GN=prpf18 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 4.843e-59
Identity = 137/394 (34.77%), Postives = 199/394 (50.51%), Query Frame = 0 
Query:    1 MDLLKQELLKKRQSLAQDT---GGKRFFKRSEIQQKEIQKLREQEKRELEAKSQKRQATSSDPATAAPTSSNTASASSSSAVAAASTSLTDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKHVLKAGVFEVDSDMTEGQTNDFLRDIAELRKRQKTGIMGERKRQKPDDGATEDREGGGGDDDLSEGG-SSGADADKDLKRMKAN--FEEL-----C--------DEDKILVFFKKLLNEWKQELHEKPESEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSL 375
            MD+LK E+ +KR+ L +     G K++FKRSE+  KE    +E+       K QK +      +++ P      +                      + L + EVIRRLR   +P+ LFGE D     RL+ +          ++   + N  LR+                     D  A  D+      ++L  G  ++  D   DLK  + N   EEL     C        D D I    K LL  W +EL+ + +  KR+  GK   AT KQ   YL PLF+  RKK LP DI++++  +++  ++R+Y+ A D Y+++AIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+Q +KRLMT CQ+ + T PSK VE+N+L
Sbjct:    1 MDILKAEIARKRKQLEEKALVGGEKKYFKRSELTAKE----KEEYFERCGYKMQKEEEEEKPSSSSNPVLELELAEEKLP-----------------MTLSRQEVIRRLRERGEPIRLFGETDYETFQRLRKI----------EILAPEVNKGLRN---------------------DLKAALDKIDQQYFNELVAGQETTDEDTQNDLKVHEENTTIEELEVLGECLGQGDDNKDMDTINKVLKFLLGVWAKELNAREDYVKRSVHGKLASATQKQTESYLKPLFRKLRKKNLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQKYFSTDPSKCVEYNAL 342
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BLAST of rna-XM_014640829.2 vs. UniProtKB/Swiss-Prot
Match: sp|O94406|PRP18_SCHPO (Pre-mRNA-splicing factor 18 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=prp18 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 8.654e-27
Identity = 53/147 (36.05%), Postives = 88/147 (59.86%), Query Frame = 0 
Query:  220 KILVFFKKLLNEWKQELHEKPESEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLP 366
            +++ F +  +  W   L  K  +   +++ +  +  F+Q  + L+ L +    + L DDI +++  +   C K +++ A D Y++L IGNAPWPIGVTMVGIHERSA +++  N  ++I+ DE  RK LQ++KR +TF +R    LP
Sbjct:  193 QVVAFLQHGIRIWDNFLSSKSINSFESSESQMQLKIFRQAKQDLDVLIQLIVDEALNDDIFKSIAEICYRCQKHEFVKANDMYLRLTIGNAPWPIGVTMVGIHERSAHQRLQANPSSNILKDEKKRKCLQALKRFITFQERESSNLP 339
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BLAST of rna-XM_014640829.2 vs. UniProtKB/Swiss-Prot
Match: sp|P33411|PRP18_YEAST (Pre-mRNA-splicing factor 18 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PRP18 PE=1 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 1.061e-13
Identity = 38/83 (45.78%), Postives = 51/83 (61.45%), Query Frame = 0 
Query:  276 PDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTN-SVAHIMNDETTRKYLQSVKRLMTF 357
            PD +     V+      ++   A+  Y+KL+IGN  WPIGVT VGIH RSA  KI    + A+IM DE TR ++ S+KRL+TF
Sbjct:  157 PDLLISLATVLYHLQQPKEINLAVQSYMKLSIGNVAWPIGVTSVGIHARSAHSKIQGGRNAANIMIDERTRLWITSIKRLITF 239
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BLAST of rna-XM_014640829.2 vs. Araport11
Match: AT1G03140.1 (| splicing factor Prp18 family protein | Chr1:754471-756223 REVERSE LENGTH=420 | 201606)

HSP 1 Score: 563.918 bits (1452), Expect = 0.000e+0
Identity = 304/424 (71.70%), Postives = 354/424 (83.49%), Query Frame = 0 
Query:    1 MDLLKQELLKKRQSLAQDTGGKRFFKRSEIQQKEIQKLREQEKRELEAKSQKRQATSSDPATA-----AP------TSSNTASASSSSAVAAASTSLTDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKHVLKAGVFEVDSDMTEGQTNDFLRDIAELRKRQKTGIMGERKRQKPDD-GATEDREGGGGDDDLSEGGSSGADADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELHEKPESEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERFSGVN--QTSEERFRIMPAPRDS 410
            MDLL++E+LKKR+SLA+++GGK+FFKRSEI+QK+IQKLRE+E+RE E K+Q+R A ++          AP      TS+++ S++S +A  A S +LTDE    NL+LP+ EVIRRLRFLKQP+TLFGEDD +RLDRLK+VLK G+FEVDSDMTEGQTNDFLRDIAEL+KRQK+G+MG+RKR+  D+ G  E   G   +D+LS G SS  DADKD+KR+KANFE+LCDEDKILVF+KKLL EWKQEL     +E+RTAKGK MVATFKQCARYL PLF  CRKK LP DIRQAL+V+V  C+KRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPT+PSKAVEFNSLANGSDLQSLLAEERF G N  Q SEER R+MP+  +S
Sbjct:    1 MDLLREEILKKRKSLAEESGGKKFFKRSEIEQKKIQKLREEERREHELKAQRRAAAAASGGDGKSSGSAPGSSNAATSASSKSSASDAAAIADSKALTDE----NLILPRQEVIRRLRFLKQPMTLFGEDDQSRLDRLKYVLKEGLFEVDSDMTEGQTNDFLRDIAELKKRQKSGMMGDRKRKSRDERGRDEGDRGETREDELSGGESSDVDADKDMKRLKANFEDLCDEDKILVFYKKLLIEWKQELDAMENTERRTAKGKQMVATFKQCARYLVPLFNLCRKKGLPADIRQALMVMVNHCIKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERFFGGNREQVSEERLRLMPSQSES 420
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BLAST of rna-XM_014640829.2 vs. Araport11
Match: AT1G54590.1 (| pre-mRNA-splicing factor-like protein | Chr1:20391560-20393457 REVERSE LENGTH=361 | 201606)

HSP 1 Score: 366.696 bits (940), Expect = 4.067e-125
Identity = 190/291 (65.29%), Postives = 225/291 (77.32%), Query Frame = 0 
Query:  122 ARLDRLKHVLKAGVFE-VDSDMTEGQTNDFLRDIAELRKRQKT-GIMGERKRQKPDDGATEDREGGGGDDDLSEGGSSGADADKDLKRMK-ANFEELCDEDKILVFFKKLLNEWKQELHEKPESEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYT-NSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERFSGVN--QTSEERFRIMPA 406
             RLDRLK+VLK G+FE VD+DMT+G+TNDFLRDI EL+KR+++ G+M +RKR+  +D            D+L      GA+ + DLK ++ ANFE+LCDEDKILVF KKLL EWKQEL     +E+RTA GK M+ATF QCARYL PLF  CR K LP DIRQ L+V+V C +KRDYL A   +IKLAIGNAPWPIGVTMVGIHERSAREKI T +SVAHIMN+ETTRKYLQSVKRLMTFCQRRY  LPSK++EFNSLANGS+L SLLAEERF   +  + SEER  +MP+
Sbjct:   85 VRLDRLKYVLKEGLFEEVDNDMTQGETNDFLRDITELKKRERSSGLMNDRKRKTSND------------DELI-----GAEKE-DLKLLEEANFEDLCDEDKILVFCKKLLLEWKQELEAMENTERRTAIGKQMLATFNQCARYLTPLFHLCRNKCLPADIRQGLMVMVNCWIKRDYLDATAQFIKLAIGNAPWPIGVTMVGIHERSAREKISTSSSVAHIMNNETTRKYLQSVKRLMTFCQRRYSALPSKSIEFNSLANGSNLHSLLAEERFFAADRERVSEERLWLMPS 357
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BLAST of rna-XM_014640829.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3TRB9|A0A1S3TRB9_VIGRR (Pre-mRNA-splicing factor 18 OS=Vigna radiata var. radiata OX=3916 GN=LOC106757960 PE=3 SV=1)

HSP 1 Score: 846.269 bits (2185), Expect = 0.000e+0
Identity = 410/410 (100.00%), Postives = 410/410 (100.00%), Query Frame = 0 
Query:    1 MDLLKQELLKKRQSLAQDTGGKRFFKRSEIQQKEIQKLREQEKRELEAKSQKRQATSSDPATAAPTSSNTASASSSSAVAAASTSLTDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKHVLKAGVFEVDSDMTEGQTNDFLRDIAELRKRQKTGIMGERKRQKPDDGATEDREGGGGDDDLSEGGSSGADADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELHEKPESEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERFSGVNQTSEERFRIMPAPRDS 410
            MDLLKQELLKKRQSLAQDTGGKRFFKRSEIQQKEIQKLREQEKRELEAKSQKRQATSSDPATAAPTSSNTASASSSSAVAAASTSLTDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKHVLKAGVFEVDSDMTEGQTNDFLRDIAELRKRQKTGIMGERKRQKPDDGATEDREGGGGDDDLSEGGSSGADADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELHEKPESEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERFSGVNQTSEERFRIMPAPRDS
Sbjct:    1 MDLLKQELLKKRQSLAQDTGGKRFFKRSEIQQKEIQKLREQEKRELEAKSQKRQATSSDPATAAPTSSNTASASSSSAVAAASTSLTDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKHVLKAGVFEVDSDMTEGQTNDFLRDIAELRKRQKTGIMGERKRQKPDDGATEDREGGGGDDDLSEGGSSGADADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELHEKPESEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERFSGVNQTSEERFRIMPAPRDS 410
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BLAST of rna-XM_014640829.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3RXW7|A0A0S3RXW7_PHAAN (Pre-mRNA-splicing factor 18 OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G300200 PE=3 SV=1)

HSP 1 Score: 843.188 bits (2177), Expect = 0.000e+0
Identity = 408/410 (99.51%), Postives = 410/410 (100.00%), Query Frame = 0 
Query:    1 MDLLKQELLKKRQSLAQDTGGKRFFKRSEIQQKEIQKLREQEKRELEAKSQKRQATSSDPATAAPTSSNTASASSSSAVAAASTSLTDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKHVLKAGVFEVDSDMTEGQTNDFLRDIAELRKRQKTGIMGERKRQKPDDGATEDREGGGGDDDLSEGGSSGADADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELHEKPESEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERFSGVNQTSEERFRIMPAPRDS 410
            MDLLK+ELLKKRQSLAQDTGGKRFFKRSEIQQKEIQKLREQEKRELEAKSQKRQATSSDPATAAPTSSN+ASASSSSAVAAASTSLTDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKHVLKAGVFEVDSDMTEGQTNDFLRDIAELRKRQKTGIMGERKRQKPDDGATEDREGGGGDDDLSEGGSSGADADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELHEKPESEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERFSGVNQTSEERFRIMPAPRDS
Sbjct:    1 MDLLKRELLKKRQSLAQDTGGKRFFKRSEIQQKEIQKLREQEKRELEAKSQKRQATSSDPATAAPTSSNSASASSSSAVAAASTSLTDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKHVLKAGVFEVDSDMTEGQTNDFLRDIAELRKRQKTGIMGERKRQKPDDGATEDREGGGGDDDLSEGGSSGADADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELHEKPESEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERFSGVNQTSEERFRIMPAPRDS 410
[Close]
BLAST of rna-XM_014640829.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9T4S4|A0A0L9T4S4_PHAAN (Pre-mRNA-splicing factor 18 OS=Phaseolus angularis OX=3914 GN=LR48_Vigan50s001900 PE=3 SV=1)

HSP 1 Score: 843.188 bits (2177), Expect = 0.000e+0
Identity = 408/410 (99.51%), Postives = 410/410 (100.00%), Query Frame = 0 
Query:    1 MDLLKQELLKKRQSLAQDTGGKRFFKRSEIQQKEIQKLREQEKRELEAKSQKRQATSSDPATAAPTSSNTASASSSSAVAAASTSLTDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKHVLKAGVFEVDSDMTEGQTNDFLRDIAELRKRQKTGIMGERKRQKPDDGATEDREGGGGDDDLSEGGSSGADADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELHEKPESEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERFSGVNQTSEERFRIMPAPRDS 410
            MDLLK+ELLKKRQSLAQDTGGKRFFKRSEIQQKEIQKLREQEKRELEAKSQKRQATSSDPATAAPTSSN+ASASSSSAVAAASTSLTDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKHVLKAGVFEVDSDMTEGQTNDFLRDIAELRKRQKTGIMGERKRQKPDDGATEDREGGGGDDDLSEGGSSGADADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELHEKPESEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERFSGVNQTSEERFRIMPAPRDS
Sbjct:    1 MDLLKRELLKKRQSLAQDTGGKRFFKRSEIQQKEIQKLREQEKRELEAKSQKRQATSSDPATAAPTSSNSASASSSSAVAAASTSLTDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKHVLKAGVFEVDSDMTEGQTNDFLRDIAELRKRQKTGIMGERKRQKPDDGATEDREGGGGDDDLSEGGSSGADADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELHEKPESEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERFSGVNQTSEERFRIMPAPRDS 410
[Close]
BLAST of rna-XM_014640829.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MB37|A0A4D6MB37_VIGUN (Pre-mRNA-splicing factor 18 OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g2332 PE=3 SV=1)

HSP 1 Score: 842.417 bits (2175), Expect = 0.000e+0
Identity = 407/410 (99.27%), Postives = 409/410 (99.76%), Query Frame = 0 
Query:    1 MDLLKQELLKKRQSLAQDTGGKRFFKRSEIQQKEIQKLREQEKRELEAKSQKRQATSSDPATAAPTSSNTASASSSSAVAAASTSLTDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKHVLKAGVFEVDSDMTEGQTNDFLRDIAELRKRQKTGIMGERKRQKPDDGATEDREGGGGDDDLSEGGSSGADADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELHEKPESEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERFSGVNQTSEERFRIMPAPRDS 410
            MDLLKQELLKKRQSLAQDTGGKRFFKRSEIQQKEIQKLREQEKRELEAKSQKR ATSSDPATAAPTSSNTASASSSSAVAAASTSLTDEQNIDNLVLPKPEVIRRLRFLKQP+TLFGEDDDARLDRLKHVLKAGVFEVDSDMTEGQTNDFLRDIAELRKRQKTGI+GERKRQKPDDGATEDREGGGGDDDLSEGGSSGADADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELHEKPESEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERFSGVNQTSEERFRIMPAPRDS
Sbjct:    1 MDLLKQELLKKRQSLAQDTGGKRFFKRSEIQQKEIQKLREQEKRELEAKSQKRHATSSDPATAAPTSSNTASASSSSAVAAASTSLTDEQNIDNLVLPKPEVIRRLRFLKQPITLFGEDDDARLDRLKHVLKAGVFEVDSDMTEGQTNDFLRDIAELRKRQKTGIIGERKRQKPDDGATEDREGGGGDDDLSEGGSSGADADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELHEKPESEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERFSGVNQTSEERFRIMPAPRDS 410
[Close]
BLAST of rna-XM_014640829.2 vs. UniProtKB/TrEMBL
Match: tr|V7BSQ0|V7BSQ0_PHAVU (Pre-mRNA-splicing factor 18 OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G035400g PE=3 SV=1)

HSP 1 Score: 815.453 bits (2105), Expect = 0.000e+0
Identity = 396/411 (96.35%), Postives = 402/411 (97.81%), Query Frame = 0 
Query:    1 MDLLKQELLKKRQSLAQDTGGKRFFKRSEIQQKEIQKLREQEKRELEAKSQKRQATSSDPATAAPTSSNTASASSSSAVAAASTSLTDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKHVLKAGVFEVDSDMTEGQTNDFLRDIAELRKRQKTGIMGERKRQKPDDGATEDREGGGGDDDLSEGGSSGADADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELHEKPESEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERFSGVNQ-TSEERFRIMPAPRDS 410
            MDLLKQELLKKRQSL Q TGGK+FFKRSEIQQKEIQKLREQEKRELEAKSQKRQATSSD ATAAPTSS TASASSSSAVAAASTSLT+EQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKHVLKAG FEVDSDMTEGQTNDFLRDIAELRKRQKTGI+GERKRQKPDDGA EDREGGGGDDDLSEGGSSGADADKDLKRMKANFE+LCDEDKILVFFKKLLNEWKQELHEK ESEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMD YIK+AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS+KRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERFSGVNQ TSEERFRIMPAPRDS
Sbjct:    1 MDLLKQELLKKRQSLVQATGGKKFFKRSEIQQKEIQKLREQEKRELEAKSQKRQATSSDAATAAPTSSTTASASSSSAVAAASTSLTNEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKHVLKAGAFEVDSDMTEGQTNDFLRDIAELRKRQKTGIIGERKRQKPDDGAAEDREGGGGDDDLSEGGSSGADADKDLKRMKANFEDLCDEDKILVFFKKLLNEWKQELHEKAESEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERFSGVNQTTSEERFRIMPAPRDS 411
[Close]
BLAST of rna-XM_014640829.2 vs. UniProtKB/TrEMBL
Match: tr|A0A371FQK6|A0A371FQK6_MUCPR (Pre-mRNA-splicing factor 18 (Fragment) OS=Mucuna pruriens OX=157652 GN=PRPF18 PE=3 SV=1)

HSP 1 Score: 739.954 bits (1909), Expect = 0.000e+0
Identity = 379/411 (92.21%), Postives = 390/411 (94.89%), Query Frame = 0 
Query:    1 MDLLKQELLKKRQSLAQDTGGKRFFKRSEIQQKEIQKLREQEKRELEAKSQKRQATSSDPATAAPTSSNTASASSSSAVAAASTSLTDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKHVLKAGVFEVDSDMTEGQTNDFLRDIAELRKRQKTGIMGERKRQKPDDGATEDREGGGGDDDLSEGGSSGAD-ADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELHEKPESEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERFSGVNQTSEERFRIMPAPRDS 410
            MDLLKQE+LKKRQSLAQDTGGK+ FKRSEIQQKEIQKLREQEKRELEAKS KR ATSSD AT AP SS  ASAS+SSAVAA++ SLTDEQ+IDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKHVLKAG FEVDSDMTEGQTNDFLRDIAELRKRQKTGIMGERKRQK DDGA EDREGG GDDDLSE G SG D ADKDLKRMKANFEELCDEDKILVFFK+LLNEWKQEL E PE+EKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALL++VECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLA+ERFSGVNQ SEER RIMPAPRDS
Sbjct:    1 MDLLKQEILKKRQSLAQDTGGKKVFKRSEIQQKEIQKLREQEKRELEAKSHKRLATSSDAATTAPASSTAASASASSAVAASTASLTDEQSIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKHVLKAGSFEVDSDMTEGQTNDFLRDIAELRKRQKTGIMGERKRQKTDDGAAEDREGGAGDDDLSEDGGSGVDDADKDLKRMKANFEELCDEDKILVFFKRLLNEWKQELREMPEAEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLLMVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAQERFSGVNQASEERLRIMPAPRDS 411
[Close]
BLAST of rna-XM_014640829.2 vs. UniProtKB/TrEMBL
Match: tr|A0A151TUD6|A0A151TUD6_CAJCA (Pre-mRNA-splicing factor 18 OS=Cajanus cajan OX=3821 GN=KK1_009921 PE=3 SV=1)

HSP 1 Score: 739.184 bits (1907), Expect = 0.000e+0
Identity = 382/411 (92.94%), Postives = 395/411 (96.11%), Query Frame = 0 
Query:    1 MDLLKQELLKKRQSLAQDTGGKRFFKRSEIQQKEIQKLREQEKRELEAKSQKRQATSSDPATAAPTSSNTASASSSSAVAAASTSLTDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKHVLKAGVFEVDSDMTEGQTNDFLRDIAELRKRQKTGIMGERKRQKPDDGATEDREGGGGDDDLSEGG-SSGADADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELHEKPESEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERFSGVNQTSEERFRIMPAPRDS 410
            MDLLKQELLKKRQSLAQDTGGKRFFKRSEIQQKEIQKLREQEKRELEAKSQKR ATSSD A A+ TS+++ASAS+SSAVAAA+ SLTDEQNIDNLVLPKPEV+RRLRFLKQPVTLFGEDDDARL+RLKHVLKAG FEVDSDMTEGQTNDFLRDIAELRKRQKTG+MGERKRQK DDGA EDREGGG DDDLSEGG SSGADADKDLKRMKANFEELCDEDKILVFFK+LLNEWKQELHE  E+EKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQAL++VVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERFSG NQ SEER RIMP PRDS
Sbjct:    1 MDLLKQELLKKRQSLAQDTGGKRFFKRSEIQQKEIQKLREQEKRELEAKSQKRLATSSDAAAASATSASSASASASSAVAAATASLTDEQNIDNLVLPKPEVVRRLRFLKQPVTLFGEDDDARLERLKHVLKAGEFEVDSDMTEGQTNDFLRDIAELRKRQKTGLMGERKRQKNDDGAAEDREGGGADDDLSEGGGSSGADADKDLKRMKANFEELCDEDKILVFFKRLLNEWKQELHEMAEAEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALMIVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERFSGTNQASEERLRIMPPPRDS 411
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BLAST of rna-XM_014640829.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445FH53|A0A445FH53_GLYSO (Pre-mRNA-splicing factor 18 OS=Glycine soja OX=3848 GN=D0Y65_051606 PE=3 SV=1)

HSP 1 Score: 736.487 bits (1900), Expect = 0.000e+0
Identity = 376/410 (91.71%), Postives = 392/410 (95.61%), Query Frame = 0 
Query:    1 MDLLKQELLKKRQSLAQDTGGKRFFKRSEIQQKEIQKLREQEKRELEAKSQKRQATSSDPATAAPTSSNTASASSSSAVAAASTSLTDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKHVLKAGVFEVDSDMTEGQTNDFLRDIAELRKRQKTGIMGERKRQKPDDGATEDREGGGGDDDLSEGGSS-GADADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELHEKPESEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERFSGVNQTSEERFRIMPAPRD 409
            MDLLKQELLKKRQSLAQDTGGK+FFKRSEIQQKEIQKLR+QEKRELEAKS KR ATSSD A  AP+SS+TAS+S+SS +A+AS SLTDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLK+VLKAGVFEVDSDMTEGQTNDFLRDIAELRKRQKTGI+GERKRQK DDGA +DREGG GDDDLS+ GSS GA+ADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQEL E PE+EKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALL++VECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDL SLLAEERFSG NQ SEER RIMPAPRD
Sbjct:    1 MDLLKQELLKKRQSLAQDTGGKKFFKRSEIQQKEIQKLRQQEKRELEAKSLKRLATSSDTAATAPSSSSTASSSASSTIASASASLTDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKYVLKAGVFEVDSDMTEGQTNDFLRDIAELRKRQKTGILGERKRQKADDGAAQDREGGAGDDDLSDCGSSEGAEADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELREMPEAEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLLMVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLHSLLAEERFSGGNQASEERLRIMPAPRD 410
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BLAST of rna-XM_014640829.2 vs. UniProtKB/TrEMBL
Match: tr|I1N9I5|I1N9I5_SOYBN (Pre-mRNA-splicing factor 18 OS=Glycine max OX=3847 GN=100785799 PE=3 SV=1)

HSP 1 Score: 736.487 bits (1900), Expect = 0.000e+0
Identity = 376/410 (91.71%), Postives = 392/410 (95.61%), Query Frame = 0 
Query:    1 MDLLKQELLKKRQSLAQDTGGKRFFKRSEIQQKEIQKLREQEKRELEAKSQKRQATSSDPATAAPTSSNTASASSSSAVAAASTSLTDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKHVLKAGVFEVDSDMTEGQTNDFLRDIAELRKRQKTGIMGERKRQKPDDGATEDREGGGGDDDLSEGGSS-GADADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELHEKPESEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERFSGVNQTSEERFRIMPAPRD 409
            MDLLKQELLKKRQSLAQDTGGK+FFKRSEIQQKEIQKLR+QEKRELEAKS KR ATSSD A  AP+SS+TAS+S+SS +A+AS SLTDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLK+VLKAGVFEVDSDMTEGQTNDFLRDIAELRKRQKTGI+GERKRQK DDGA +DREGG GDDDLS+ GSS GA+ADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQEL E PE+EKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALL++VECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDL SLLAEERFSG NQ SEER RIMPAPRD
Sbjct:    1 MDLLKQELLKKRQSLAQDTGGKKFFKRSEIQQKEIQKLRQQEKRELEAKSLKRLATSSDTAATAPSSSSTASSSASSTIASASASLTDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKYVLKAGVFEVDSDMTEGQTNDFLRDIAELRKRQKTGILGERKRQKADDGAAQDREGGAGDDDLSDCGSSEGAEADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELREMPEAEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLLMVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLHSLLAEERFSGGNQASEERLRIMPAPRD 410
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BLAST of rna-XM_014640829.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445LC26|A0A445LC26_GLYSO (Pre-mRNA-splicing factor 18 OS=Glycine soja OX=3848 GN=D0Y65_007266 PE=3 SV=1)

HSP 1 Score: 734.561 bits (1895), Expect = 0.000e+0
Identity = 372/413 (90.07%), Postives = 391/413 (94.67%), Query Frame = 0 
Query:    1 MDLLKQELLKKRQSLAQDTGGKRFFKRSEIQQKEIQKLREQEKRELEAKSQKRQATSSD-PATAAPTSSNTASASSSSAVAAASTSLTDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKHVLKAGVFEVDSDMTEGQTNDFLRDIAELRKRQKTGIMGERKRQKPDDGATEDREGGGGDDDLSE-GGSSGADADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELHEKPESEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERFSGVNQ-TSEERFRIMPAPRDS 410
            MDLLKQELLKKRQSLAQDTGGK+FFKRSEIQQKEIQKLREQEKRELEAKSQKR ATSSD  ATA  +SS  ++++SS+  ++++ SLT+EQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLK+VLKAGVFEVDSDMTEGQTNDFLRDIAELRKRQKTGI+GERKRQK DDGA EDREGG GDDDLS+ GGS GADADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQEL E PE+EKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALL++VECCM+RDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDL SLLAEERFSG NQ  SEER RIMPAPRDS
Sbjct:    1 MDLLKQELLKKRQSLAQDTGGKKFFKRSEIQQKEIQKLREQEKRELEAKSQKRLATSSDNAATAPSSSSTASASASSTIASSSAASLTNEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKYVLKAGVFEVDSDMTEGQTNDFLRDIAELRKRQKTGILGERKRQKADDGAAEDREGGAGDDDLSDCGGSDGADADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELREMPEAEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLLMVECCMRRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLHSLLAEERFSGGNQAASEERLRIMPAPRDS 413
The following BLAST results are available for this feature:
BLAST of rna-XM_014640829.2 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 9
Match NameE-valueIdentityDescription
sp|Q99633|PRP18_HUMAN6.983e-6636.36Pre-mRNA-splicing factor 18 OS=Homo sapiens OX=960... [more]
sp|Q5RE03|PRP18_PONAB9.942e-6636.36Pre-mRNA-splicing factor 18 OS=Pongo abelii OX=960... [more]
sp|Q8BM39|PRP18_MOUSE1.130e-6536.36Pre-mRNA-splicing factor 18 OS=Mus musculus OX=100... [more]
sp|Q9JKB8|PRP18_RAT2.550e-6537.50Pre-mRNA-splicing factor 18 OS=Rattus norvegicus O... [more]
sp|Q2HJ41|PRP18_BOVIN3.478e-6536.10Pre-mRNA-splicing factor 18 OS=Bos taurus OX=9913 ... [more]
sp|Q6GMH0|PRP18_DANRE4.691e-6134.74Pre-mRNA-splicing factor 18 OS=Danio rerio OX=7955... [more]
sp|Q5EAV6|PRP18_XENLA4.843e-5934.77Pre-mRNA-splicing factor 18 OS=Xenopus laevis OX=8... [more]
sp|O94406|PRP18_SCHPO8.654e-2736.05Pre-mRNA-splicing factor 18 OS=Schizosaccharomyces... [more]
sp|P33411|PRP18_YEAST1.061e-1345.78Pre-mRNA-splicing factor 18 OS=Saccharomyces cerev... [more]
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BLAST of rna-XM_014640829.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G03140.10.000e+071.70| splicing factor Prp18 family protein | Chr1:7544... [more]
AT1G54590.14.067e-12565.29| pre-mRNA-splicing factor-like protein | Chr1:203... [more]
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BLAST of rna-XM_014640829.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S3TRB9|A0A1S3TRB9_VIGRR0.000e+0100.00Pre-mRNA-splicing factor 18 OS=Vigna radiata var. ... [more]
tr|A0A0S3RXW7|A0A0S3RXW7_PHAAN0.000e+099.51Pre-mRNA-splicing factor 18 OS=Vigna angularis var... [more]
tr|A0A0L9T4S4|A0A0L9T4S4_PHAAN0.000e+099.51Pre-mRNA-splicing factor 18 OS=Phaseolus angularis... [more]
tr|A0A4D6MB37|A0A4D6MB37_VIGUN0.000e+099.27Pre-mRNA-splicing factor 18 OS=Vigna unguiculata O... [more]
tr|V7BSQ0|V7BSQ0_PHAVU0.000e+096.35Pre-mRNA-splicing factor 18 OS=Phaseolus vulgaris ... [more]
tr|A0A371FQK6|A0A371FQK6_MUCPR0.000e+092.21Pre-mRNA-splicing factor 18 (Fragment) OS=Mucuna p... [more]
tr|A0A151TUD6|A0A151TUD6_CAJCA0.000e+092.94Pre-mRNA-splicing factor 18 OS=Cajanus cajan OX=38... [more]
tr|A0A445FH53|A0A445FH53_GLYSO0.000e+091.71Pre-mRNA-splicing factor 18 OS=Glycine soja OX=384... [more]
tr|I1N9I5|I1N9I5_SOYBN0.000e+091.71Pre-mRNA-splicing factor 18 OS=Glycine max OX=3847... [more]
tr|A0A445LC26|A0A445LC26_GLYSO0.000e+090.07Pre-mRNA-splicing factor 18 OS=Glycine soja OX=384... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004098Prp18PFAMPF02840Prp18coord: 223..364
e-value: 2.7E-62
score: 209.1
IPR036285PRP4-like superfamilyGENE3D4.10.280.110coord: 70..148
e-value: 1.0E-15
score: 59.0
IPR036285PRP4-like superfamilySUPERFAMILY158230PRP4-likecoord: 91..132
IPR014906Pre-mRNA processing factor 4 (PRP4)-likePFAMPF08799PRP4coord: 102..128
e-value: 1.5E-11
score: 43.6
NoneNo IPR availableGENE3D1.20.940.10Functional domain of the splicing factor Prp18coord: 196..365
e-value: 5.0E-59
score: 201.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 162..202
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 162..189
NoneNo IPR availableSUPERFAMILY47938Functional domain of the splicing factor Prp18coord: 199..364
IPR039979Pre-mRNA-splicing factor 18PANTHERPTHR13007PRE-MRNA SPLICING FACTOR-RELATEDcoord: 1..377

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_014640829.2_VrVC1973A-SNU_v1 ID=rna-XM_014640829.2_VrVC1973A-SNU_v1; Name=rna-XM_014640829.2; organism=Vigna radiata; type=mRNA; length=1233bp
ATGGATCTTCTGAAGCAAGAGCTTCTAAAGAAGCGTCAATCTCTGGCGCA
AGACACCGGCGGCAAGAGATTCTTCAAGCGCTCCGAGATCCAACAGAAGG
AAATCCAAAAACTCCGCGAGCAAGAGAAGCGCGAATTGGAAGCGAAGTCG
CAAAAGCGCCAAGCAACGTCCTCCGACCCCGCTACCGCCGCCCCCACCTC
CTCGAACACCGCCTCCGCATCATCCTCATCTGCCGTCGCTGCCGCCTCCA
CCTCCCTTACTGACGAACAAAACATCGACAACCTCGTCCTCCCGAAACCT
GAGGTCATCCGCCGCCTCCGCTTCTTGAAGCAACCGGTCACGCTCTTCGG
GGAGGACGACGATGCCCGGCTGGACCGCCTGAAGCACGTTCTGAAGGCTG
GCGTGTTTGAGGTGGACAGCGACATGACCGAGGGGCAGACCAACGACTTC
CTGCGCGACATCGCTGAGCTCCGGAAGCGCCAGAAGACCGGGATCATGGG
CGAGAGGAAGCGCCAGAAGCCCGACGACGGTGCCACCGAGGACCGAGAGG
GTGGAGGTGGTGACGACGACTTGAGCGAGGGAGGCTCTAGCGGTGCCGAT
GCCGATAAAGATTTGAAGCGTATGAAGGCGAATTTTGAGGAGCTGTGCGA
CGAGGATAAGATTCTGGTGTTTTTTAAGAAGCTCCTGAACGAGTGGAAGC
AGGAGTTGCACGAGAAGCCTGAGTCGGAGAAGCGCACGGCTAAGGGGAAG
TCCATGGTTGCTACGTTTAAGCAGTGTGCGCGTTACTTGAATCCGCTGTT
CAAGTTTTGTAGGAAGAAGGTTCTTCCTGATGACATTCGACAGGCGCTGT
TGGTGGTGGTTGAATGCTGTATGAAGCGAGATTATCTGGCTGCAATGGAC
CATTACATCAAGCTGGCCATCGGGAATGCACCCTGGCCTATTGGAGTCAC
TATGGTTGGTATTCATGAAAGATCTGCCCGTGAAAAGATCTACACTAACA
GTGTTGCTCACATCATGAATGACGAGACCACTCGCAAGTACCTGCAATCC
GTGAAGAGGTTAATGACATTTTGCCAACGGCGTTATCCGACATTGCCGTC
TAAAGCAGTTGAGTTTAACAGTTTGGCAAATGGCAGTGATTTACAGTCCC
TTCTTGCAGAAGAGAGATTTAGTGGGGTCAACCAAACATCTGAAGAAAGG
TTTAGGATAATGCCTGCTCCTAGAGACAGCTAG
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protein sequence of rna-XM_014640829.2_VrVC1973A-SNU_v1

>rna-XM_014640829.2_VrVC1973A-SNU_v1 ID=rna-XM_014640829.2_VrVC1973A-SNU_v1; Name=rna-XM_014640829.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=410bp
MDLLKQELLKKRQSLAQDTGGKRFFKRSEIQQKEIQKLREQEKRELEAKS
QKRQATSSDPATAAPTSSNTASASSSSAVAAASTSLTDEQNIDNLVLPKP
EVIRRLRFLKQPVTLFGEDDDARLDRLKHVLKAGVFEVDSDMTEGQTNDF
LRDIAELRKRQKTGIMGERKRQKPDDGATEDREGGGGDDDLSEGGSSGAD
ADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELHEKPESEKRTAKGK
SMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMD
HYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS
VKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERFSGVNQTSEER
FRIMPAPRDS
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mRNA from alignment at chr03:1314893..1319232+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_014640829.2_VrVC1973A-SNU_v1 ID=rna-XM_014640829.2_VrVC1973A-SNU_v1; Name=rna-XM_014640829.2; organism=Vigna radiata; type=mRNA; length=4340bp; location=Sequence derived from: chr03:1314893..1319232+ (Vigna radiata
CGGCGGCATTAAAGTTGGTCGGGTTCTCCTGTAGgagttttcaattttaa
tccgaaggattaaattgaaataaccAGACTCTTCACCACCGCGTCGCAAA
CCCTAGATGGATCTTCTGAAGCAAGAGCTTCTAAAGAAGCGTCAATCTCT
GGCGCAAGACACCGGCGGCAAGAGATTCTTCAAGCGCTCCGAGATCCAAC
AGAAGGAAATCCAAAAACTCCGCGAGCAAGAGAAGCGCGAATTGGAAGCG
AAGTCGCAAAAGCGCCAAGCAACGTCCTCCGACCCCGCTACCGCCGCCCC
CACCTCCTCGAACACCGCCTCCGCATCATCCTCATCTGCCGTCGCTGCCG
CCTCCACCTCCCTTACTGACGAACAAAACATCGACAACCTCGTCCTCCCG
AAACCTGAGGTCATCCGCCGCCTCCGCTTCTTGAAGCAACCGGTCACGCT
CTTCGGGGAGGACGACGATGCCCGGCTGGACCGCCTGAAGCACGTTCTGA
AGGCTGGCGTGTTTGAGGTGGACAGCGACATGACCGAGGGGCAGACCAAC
GACTTCCTGCGCGACATCGCTGAGCTCCGGAAGCGCCAGAAGACCGGGAT
CATGGGCGAGAGGAAGCGCCAGAAGCCCGACGACGGTGCCACCGAGGACC
GAGAGGGTGGAGGTGGTGACGACGACTTGAGCGAGGGAGGCTCTAGCGGT
GCCGATGCCGATAAAGATTTGAAGCGTATGAAGGCGAATTTTGAGGAGCT
GTGCGACGAGGATAAGATTCTGGTGTTTTTTAAGAAGCTCCTGAACGAGT
GGAAGCAGGAGTTGCACGAGAAGCCTGAGTCGGAGAAGCGCACGGCTAAG
GGGAAGTCCATGGTTGCTACGTTTAAGCAGTGTGCGCGTTACTTGAATCC
GCTGTTCAAGTTTTGTAGGAAGAAGGTGAGTTTTCTCTCTTCATGGCTTT
TGTATGCTTTGGATTTTGTTGACTGGCGATCCTTGTGTAATTGGTCATCG
TTTTGTGATTGGATGATATTGTTAATTGTTAAATGTATGGCAGAATAAAT
CCACTAAATAGAACTTTCTGAAGTATAGTTTCAATGAAGAGAGACCGAAA
GTATGCTATTGTCATCATGTCTTCGGTGAAGTATATACATTTAACTTAGG
TGTAGGCGAGAGCATGGTGGTATTATCTTTTCTACTATGATTTTGTATTG
GTTGGACTGTATGACTGGTAGGAGTGTAATGCCATTCCGAGGGTATGTGT
GTGATTCTGCACAGTAGCAGTGGCGCTACAATGGAGTAGTGGCCCTAGGC
TGCTAAAGGATTCAAATAATGGCTCAAATAGCATATTTTTGTGAGCTATG
TTTTGGTGGTGTAGGTTTCAAATCCCCAATTTTTAATCTGAAACAAtgtt
aagattttattttgggTAAAATTCTGATTTCTCCCCTATTTTCTATTGTC
TTTTTAGCTCCAGAAACATAATAGGATTATACACTCTTCTTCCTTGATCG
TTCCACTCTCTTCTTAAATTGGGTCGGGTACCTAATTCATCATCACAAAA
TTTGGCTTGTAAGATGAAGACTGTATCTAACATTATAGGCACAAGTTAGA
TCATAGTTATAGTCTATTAGGGATATCAACCCCTCTAGGCTGCTATTAGA
CTGGCGAGGAGTAACTGCAGTTAAGGTTGCTGTGTGACAGTTGCCTCTGT
TTGAATTCTTTCTCTCACATCTTACAGAGCTCTTCTTTTTCCTGCATTAc
attctttctttattctttagATTTCCTACTTCATACACtgttaattttga
actaattatttatgttttgtctaccaatttaatttaatttcaccatcttc
tttcattttctggACATCATCACATCACTGTACATCATAATAATTTTGGA
GATTTCGTGATGAATTTGGCTGCTTGGGGTGCCAAGTAGTGGACAATAAA
TATAGTTCATTACTTCTTAGAATTGATAAATCTTTTATGTATCAATTATA
AGCATATTTGGTGCATGTTTGAACAGCTTTTTTTAAGGAAATAGTCTATA
TTTTTTCTccaaaagtatttttttcaaagaagcTCATAcgagaaaaattt
attttccccAAAATAATCTGATCCAAACATTCTCCAAGGAGTAATCTAAC
CAGCTTGATAGATTAATGTAGCCAACTTAAGGAtgtttgttattgttgaa
aACTTGAAATTTGGAGAGGTAATGTGGTACAAAAATTGGTTGTGTAGGTG
TAGTTATTCATGCCGAGGTACAAAATTCGTAGATAAAAAATGTTAACGAA
ACTGCATATCAGTTTATTATCCCACGCCTCCCTTCTCTCAGCAATCATGT
TGTGAAACTTTAACGGTCATAGTTTAGCCAAACCTTTTAGCTTGATTATA
ATATGGTTAGTTCTGAAAAATATGATATCGTGCGTAATCTTAGTCATTGT
ATAGGGTGATGCTTAATCTGATCCTAAAAATGATAAGTTGTCTTGTAAGT
AACAGTGTACACGAATCATAGACTTTTGATTAGCTGCAGGGCGCAGAAAC
ATCTTTAGATTAaggtatataatatataaccaAGGGAAGAAACCTCAGCA
AAATCACACGGTAAAAGTTTCCTGGATCTATTGGGAGGCGATTCCATCAT
AATGTTCCCGGATCTATTAGCTGGATACCGTCTTTGAAAATATTGTGGGC
CTTTTTTCCAAAGGAATTACACGTTTTGAAGGATCTAAGAGCGCTCAAAG
TATTAGGCTCTACTGATTGCCAAAGTGGAGAGCAAAGCTGGAAaacaatt
ttatcaattttcttcCACTGTTGAATTTGATCTAGTGGTACTGAATTCCC
ATCTCCTAAATGATCGTGGAAACCTTGGCCAAGGAACCAAAGGCAAACTG
AGATAAGTAGATTTTTGATTTAATTTCTCTAAAGTTATGGATGGGGCTTG
GAAAAAGAAGACATAGTCCTTGAAGACGTGTTGAACAAGTAGAGGCAGGG
GCATAGTCCACGGAGAAAGAACAAAAGGCAACCTAGGGTTTCAAGAGAGA
GAAACGGCAGTGGTGGAAGGTGGGTGACTAAATGACAATTCCTTTGATAA
GCAGACAAAGGCAAAGCGTGATTGATCCACTCTGATGCCAACTTTAGATA
AATACAAAGGAATTAGAGTAAATTTGAGAGAGTGACTTTTCTCCTTTAga
aattcatattataataacttGGGATACATAAGATACAATGTATGAGAGGG
AAGagtagaaaatatgaaaagatataTCTAGGAACTAGGTATATCATAAA
ACACAACACCTTTacaaaaaattctatttaagaCTATTTATTCTAAGAGG
CCTAAACAAAATTTCTGTTTTTCGGCATTCATCTTGGGGCTAACAAGTTT
TGGAAGCAATATTGTTTGTCATTTTGCACAGTGCAAGTTTACGAAGCACC
CAATATTGACAGGGCAAGTGTGAGATATAATTGACTTTCACTTTCCAATG
CTTGTGTCCTTTCTAGAAGGATATAGATAGTATGCGGTCTCCTCTATCGG
TTCTCCGTTGCACTAGAGAATAAAAGGATTTACTGAATATGGCTATAACC
GTtgaatatttagcatatctttTTGAGGTCTACGTTCCTTTTCTTACCAG
TACATAATGTTTAAGTAATGCATATTGATTGAACAGCaatcataaatttt
tgttgataagCATGAGTCAGTTTTACATATATTATGAAGTAATTAACTAA
TGGAATGGATGCGGTGTGTTCTATTTTCAGGTTCTTCCTGATGACATTCG
ACAGGCGCTGTTGGTGGTGGTTGAATGCTGTATGAAGCGAGATTATCTGG
CTGCAATGGACCATTACATCAAGCTGGCCATCGGGAATGCACCCTGGCCT
ATTGGAGTCACTATGGTTGGTATTCATGAAAGATCTGCCCGTGAAAAGAT
CTACACTAACAGTGTTGCTCACATCATGAATGACGAGACCACTCGCAAGT
ACCTGCAATCCGTGAAGAGGTTAATGACATTTTGCCAACGGCGTTATCCG
ACATTGCCGTCTAAAGCAGTTGAGTTTAACAGTTTGGCAAATGGCAGTGA
TTTACAGTCCCTTCTTGCAGAAGAGAGATTTAGTGGGGTCAACCAAACAT
CTGAAGAAAGGTTTAGGATAATGCCTGCTCCTAGAGACAGCTAGTTAATC
CATGCTTTCTAAAAGACATATTCATATGATGTATACTATCTATGTCAAAT
TGCTGCTTTACTTTGTACAATCGATGTGTTATGAAACATGTAAAAATTCA
GATGTTATTACTATTTGATTAAATCAGCGTTTTTTAACTA
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Coding sequence (CDS) from alignment at chr03:1314893..1319232+

>rna-XM_014640829.2_VrVC1973A-SNU_v1 ID=rna-XM_014640829.2_VrVC1973A-SNU_v1; Name=rna-XM_014640829.2; organism=Vigna radiata; type=CDS; length=1233bp; location=Sequence derived from: chr03:1314893..1319232+ (Vigna radiata
ATGGATCTTCTGAAGCAAGAGCTTCTAAAGAAGCGTCAATCTCTGGCGCA
AGACACCGGCGGCAAGAGATTCTTCAAGCGCTCCGAGATCCAACAGAAGG
AAATCCAAAAACTCCGCGAGCAAGAGAAGCGCGAATTGGAAGCGAAGTCG
CAAAAGCGCCAAGCAACGTCCTCCGACCCCGCTACCGCCGCCCCCACCTC
CTCGAACACCGCCTCCGCATCATCCTCATCTGCCGTCGCTGCCGCCTCCA
CCTCCCTTACTGACGAACAAAACATCGACAACCTCGTCCTCCCGAAACCT
GAGGTCATCCGCCGCCTCCGCTTCTTGAAGCAACCGGTCACGCTCTTCGG
GGAGGACGACGATGCCCGGCTGGACCGCCTGAAGCACGTTCTGAAGGCTG
GCGTGTTTGAGGTGGACAGCGACATGACCGAGGGGCAGACCAACGACTTC
CTGCGCGACATCGCTGAGCTCCGGAAGCGCCAGAAGACCGGGATCATGGG
CGAGAGGAAGCGCCAGAAGCCCGACGACGGTGCCACCGAGGACCGAGAGG
GTGGAGGTGGTGACGACGACTTGAGCGAGGGAGGCTCTAGCGGTGCCGAT
GCCGATAAAGATTTGAAGCGTATGAAGGCGAATTTTGAGGAGCTGTGCGA
CGAGGATAAGATTCTGGTGTTTTTTAAGAAGCTCCTGAACGAGTGGAAGC
AGGAGTTGCACGAGAAGCCTGAGTCGGAGAAGCGCACGGCTAAGGGGAAG
TCCATGGTTGCTACGTTTAAGCAGTGTGCGCGTTACTTGAATCCGCTGTT
CAAGTTTTGTAGGAAGAAGGTTCTTCCTGATGACATTCGACAGGCGCTGT
TGGTGGTGGTTGAATGCTGTATGAAGCGAGATTATCTGGCTGCAATGGAC
CATTACATCAAGCTGGCCATCGGGAATGCACCCTGGCCTATTGGAGTCAC
TATGGTTGGTATTCATGAAAGATCTGCCCGTGAAAAGATCTACACTAACA
GTGTTGCTCACATCATGAATGACGAGACCACTCGCAAGTACCTGCAATCC
GTGAAGAGGTTAATGACATTTTGCCAACGGCGTTATCCGACATTGCCGTC
TAAAGCAGTTGAGTTTAACAGTTTGGCAAATGGCAGTGATTTACAGTCCC
TTCTTGCAGAAGAGAGATTTAGTGGGGTCAACCAAACATCTGAAGAAAGG
TTTAGGATAATGCCTGCTCCTAGAGACAGCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR004098Prp18
IPR036285PRP4-like_sf
IPR014906PRP4-like
IPR039979PRPF18
Vocabulary: Biological Process
TermDefinition
GO:0008380RNA splicing
Vocabulary: Cellular Component
TermDefinition
GO:0005681spliceosomal complex