rna-XM_014656228.1

Transcript Overview


Name	rna-XM_014656228.1
Unique Name	rna-XM_014656228.1_VrVC1973A-SNU_v1
Type	mRNA
Organism	Vigna radiata (Mung bean, green gram)
Sequence length	1761
Product	uncharacterized LOC106770416

References

External references for this mRNA


Database	Accession
GeneID	106770416
Genbank	XM_014656228.1

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr08	chromosome	chr08:25639643..25641403 +	Vigna radiata cv. VC1973A genome v6.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vigna radiata cv. VC1973A genome v6.0	2023-06-13
InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0	2023-06-20
Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot	2023-06-20
Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11	2023-06-20
Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL	2023-06-20

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
anvrvL0657	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvrvL0806	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvrvL1114	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvrvL1173	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
caivrvL307	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
caivrvL390	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
cavrvL240	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
cavrvL339	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
ccvrvL0700	Cajanus cajan Asha genome v1.0	Cajanus cajan
crvrvL282	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
crvrvL376	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
psvrvL225	Pisum sativum Cameor genome v1a	Pisum sativum
pvvrvL067	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
psvrvL538	Pisum sativum Cameor genome v1a	Pisum sativum
pvvrvL591	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
tifvrvL385	Vicia faba cv. Tiffany genome v1.0	Vicia faba
tifvrvL608	Vicia faba cv. Tiffany genome v1.0	Vicia faba
vrvvrvL142	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
vfhvrvL400	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
vfhvrvL615	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
vrvvssR772	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vrvvssR811	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vrvzwsR625	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
vrvzwsR654	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
vrvvuaR544	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
vrvvuR587	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
vrvvuaR575	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
vrvvuR624	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
ccavrvL238	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccavrvL374	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
vrvvumR620	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vrvvumR680	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vrvvvaR742	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
vrvvvaR792	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
vrvvstR654	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vrvvstR673	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vasvrvL409	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
vasvrvL583	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
pvfvrvL062	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
pvfvrvL551	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
vrvvunR546	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
vrvvunR584	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
gene-LOC106770416	gene-LOC106770416_VrVC1973A-SNU_v1	Vigna radiata	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
exon-XM_014656228.1-1	exon-XM_014656228.1-1_VrVC1973A-SNU_v1	Vigna radiata	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
cds-XP_014511714.1	cds-XP_014511714.1_VrVC1973A-SNU_v1	Vigna radiata	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
rna-XM_014656228.1_VrVC1973A-SNU_v1	rna-XM_014656228.1_VrVC1973A-SNU_v1	Vigna radiata	polypeptide
rna-XM_014656228.1_VrVC1973A-SNU_v1	rna-XM_014656228.1_VrVC1973A-SNU_v1-protein	Vigna radiata	polypeptide

Homology

[Close]

BLAST of rna-XM_014656228.1 vs. UniProtKB/Swiss-Prot
Match: sp|P92520|M820_ARATH (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.091e-14
Identity = 35/75 (46.67%), Postives = 46/75 (61.33%), Query Frame = 0

Query:  510 KEPNSYAEARGSLEWVDAMNKEIKALEYNGTWFLTKLPPGKKAIGCKWVYKIKHRADGTVERYKSRLVAKGYTQQ 584
            KEP S   A     W  AM +E+ AL  N TW L   P  +  +GCKWV+K K  +DGT++R K+RLVAKG+ Q+
Sbjct:   26 KEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQE 100

[Close]

BLAST of rna-XM_014656228.1 vs. UniProtKB/Swiss-Prot
Match: sp|P10978|POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.536e-11
Identity = 35/86 (40.70%), Postives = 54/86 (62.79%), Query Frame = 0

Query:  503 YYLQNAAKEPNSYAEARGSLE---WVDAMNKEIKALEYNGTWFLTKLPPGKKAIGCKWVYKIKHRADGTVERYKSRLVAKGYTQQR 585
            Y L +  +EP S  E     E    + AM +E+++L+ NGT+ L +LP GK+ + CKWV+K+K   D  + RYK+RLV KG+ Q++
Sbjct:  802 YVLISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKK 887

[Close]

BLAST of rna-XM_014656228.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q94HW2|POLR1_ARATH (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.121e-11
Identity = 34/78 (43.59%), Postives = 46/78 (58.97%), Query Frame = 0

Query:  508 AAKEPNSYAEARGSLEWVDAMNKEIKALEYNGTWFLTKLPPGKKAI-GCKWVYKIKHRADGTVERYKSRLVAKGYTQQ 584
            A  EP +  +A     W +AM  EI A   N TW L   PP    I GC+W++  K+ +DG++ RYK+RLVAKGY Q+
Sbjct:  952 AESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQR 1029

[Close]

BLAST of rna-XM_014656228.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9ZT94|POLR2_ARATH (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.981e-10
Identity = 34/78 (43.59%), Postives = 44/78 (56.41%), Query Frame = 0

Query:  508 AAKEPNSYAEARGSLEWVDAMNKEIKALEYNGTWFLTKLPPGKKAI-GCKWVYKIKHRADGTVERYKSRLVAKGYTQQ 584
            A  EP +  +A     W  AM  EI A   N TW L   PP    I GC+W++  K  +DG++ RYK+RLVAKGY Q+
Sbjct:  935 ANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQR 1012

[Close]

BLAST of rna-XM_014656228.1 vs. Araport11
Match: AT1G21280.1 (| Copia-like polyprotein/retrotransposon | Chr1:7447690-7448403 REVERSE LENGTH=237 | 201606)

HSP 1 Score: 130.183 bits (326), Expect = 4.190e-34
Identity = 73/220 (33.18%), Postives = 116/220 (52.73%), Query Frame = 0

Query:    7 TNNPSSPYYLHPG-ENPGISLISQI-LDESNYTSWSRSMRRALLSKNKLKFINGEIKKPKREDALYDAWERNNMMVLSWIIKTLSVHIAESVVYVEDAQELWEELKERFSKGDHFKFSDLLQEIHSIKQGERTVNQYFTYLKILWEELEFLRPIPSCSYKIPYSCDLSKAGHKYREMEHVICFLKG--LNDCYNTVRTQILLMEPLPNINRVFSLIIQQE 222
            T++P SPYYL P   +P    I ++  DE NY +W    R  L    K  FI+G + KP     LY  WE+ N MV+ W++ +++  + ESV+Y E A ++WE+L+  F      K   L + + +++QG  +V +YF  L  +W EL    PIP C      +C+ +K   + RE E    FL G  LN  +  V T+I+  +P P+++  F+++   E
Sbjct:   11 TSDPDSPYYLPPDIHHPSDFSIQKLSKDEDNYVAWKIRFRSFLRVTKKFGFIDGTLPKPDPFSPLYQPWEQCNAMVMYWLMNSMTDKLLESVMYAETAHKMWEDLRRVFVPCVDLKIYQLRRRLATLRQGGDSVEEYFGKLSKVWMELSEYAPIPECKCG-GCNCECTKRAEEAREKEQRYEFLMGLKLNQGFEAVTTKIMFQKPPPSLHEAFAMVKDAE 229

[Close]

BLAST of rna-XM_014656228.1 vs. Araport11
Match: AT4G23160.3 (| cysteine-rich RECEPTOR-like kinase | Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606)

HSP 1 Score: 109.768 bits (273), Expect = 1.190e-24
Identity = 50/87 (57.47%), Postives = 62/87 (71.26%), Query Frame = 0

Query:  498 VYNGLYYLQNAAKEPNSYAEARGSLEWVDAMNKEIKALEYNGTWFLTKLPPGKKAIGCKWVYKIKHRADGTVERYKSRLVAKGYTQQ 584
            +Y+        AKEP++Y EA+  L W  AM+ EI A+E   TW +  LPP KK IGCKWVYKIK+ +DGT+ERYK+RLVAKGYTQQ
Sbjct:   72 LYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQ 158

[Close]

BLAST of rna-XM_014656228.1 vs. Araport11
Match: AT4G23160.2 (| cysteine-rich RECEPTOR-like kinase | Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606)

HSP 1 Score: 109.768 bits (273), Expect = 1.190e-24
Identity = 50/87 (57.47%), Postives = 62/87 (71.26%), Query Frame = 0

Query:  498 VYNGLYYLQNAAKEPNSYAEARGSLEWVDAMNKEIKALEYNGTWFLTKLPPGKKAIGCKWVYKIKHRADGTVERYKSRLVAKGYTQQ 584
            +Y+        AKEP++Y EA+  L W  AM+ EI A+E   TW +  LPP KK IGCKWVYKIK+ +DGT+ERYK+RLVAKGYTQQ
Sbjct:   72 LYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQ 158

[Close]

BLAST of rna-XM_014656228.1 vs. Araport11
Match: ATMG00820.1 (| Reverse transcriptase (RNA-dependent DNA polymerase) | ChrM:228573-229085 REVERSE LENGTH=170 | 201606)

HSP 1 Score: 75.485 bits (184), Expect = 1.116e-15
Identity = 35/75 (46.67%), Postives = 46/75 (61.33%), Query Frame = 0

Query:  510 KEPNSYAEARGSLEWVDAMNKEIKALEYNGTWFLTKLPPGKKAIGCKWVYKIKHRADGTVERYKSRLVAKGYTQQ 584
            KEP S   A     W  AM +E+ AL  N TW L   P  +  +GCKWV+K K  +DGT++R K+RLVAKG+ Q+
Sbjct:   26 KEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQE 100

[Close]

BLAST of rna-XM_014656228.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3V0N0|A0A1S3V0N0_VIGRR (uncharacterized protein LOC106770416 OS=Vigna radiata var. radiata OX=3916 GN=LOC106770416 PE=4 SV=1)

HSP 1 Score: 1231.47 bits (3185), Expect = 0.000e+0
Identity = 586/586 (100.00%), Postives = 586/586 (100.00%), Query Frame = 0

Query:    1 MANTEQTNNPSSPYYLHPGENPGISLISQILDESNYTSWSRSMRRALLSKNKLKFINGEIKKPKREDALYDAWERNNMMVLSWIIKTLSVHIAESVVYVEDAQELWEELKERFSKGDHFKFSDLLQEIHSIKQGERTVNQYFTYLKILWEELEFLRPIPSCSYKIPYSCDLSKAGHKYREMEHVICFLKGLNDCYNTVRTQILLMEPLPNINRVFSLIIQQERQERQEKHESGHTSQTEIKVLASNTDKQSNWKNDQNWKGYGRGFSGRGQGRGRGRNPNQGKQCSYCHKMNHTIEECYSKHGYPPWYKKGDNSGQNSFAQNQWGNTNVCTTTADPQNNQHSQSNQQSNFNSIQSTFTPEQMKRLLEMLDSTEKSSHSVSQIHKDIIEDXQGMFSWIMDTGATDHVTHDKNSFTTFYKIKPISVRLPNKSTVTAHYAGTVQFSPNFTIFNVLYIPDFTFNLISVQSLTKDTNCILTFSSELCKIQDRTTLRMIGCVKVYNGLYYLQNAAKEPNSYAEARGSLEWVDAMNKEIKALEYNGTWFLTKLPPGKKAIGCKWVYKIKHRADGTVERYKSRLVAKGYTQQRV 586
            MANTEQTNNPSSPYYLHPGENPGISLISQILDESNYTSWSRSMRRALLSKNKLKFINGEIKKPKREDALYDAWERNNMMVLSWIIKTLSVHIAESVVYVEDAQELWEELKERFSKGDHFKFSDLLQEIHSIKQGERTVNQYFTYLKILWEELEFLRPIPSCSYKIPYSCDLSKAGHKYREMEHVICFLKGLNDCYNTVRTQILLMEPLPNINRVFSLIIQQERQERQEKHESGHTSQTEIKVLASNTDKQSNWKNDQNWKGYGRGFSGRGQGRGRGRNPNQGKQCSYCHKMNHTIEECYSKHGYPPWYKKGDNSGQNSFAQNQWGNTNVCTTTADPQNNQHSQSNQQSNFNSIQSTFTPEQMKRLLEMLDSTEKSSHSVSQIHKDIIEDXQGMFSWIMDTGATDHVTHDKNSFTTFYKIKPISVRLPNKSTVTAHYAGTVQFSPNFTIFNVLYIPDFTFNLISVQSLTKDTNCILTFSSELCKIQDRTTLRMIGCVKVYNGLYYLQNAAKEPNSYAEARGSLEWVDAMNKEIKALEYNGTWFLTKLPPGKKAIGCKWVYKIKHRADGTVERYKSRLVAKGYTQQRV
Sbjct:    1 MANTEQTNNPSSPYYLHPGENPGISLISQILDESNYTSWSRSMRRALLSKNKLKFINGEIKKPKREDALYDAWERNNMMVLSWIIKTLSVHIAESVVYVEDAQELWEELKERFSKGDHFKFSDLLQEIHSIKQGERTVNQYFTYLKILWEELEFLRPIPSCSYKIPYSCDLSKAGHKYREMEHVICFLKGLNDCYNTVRTQILLMEPLPNINRVFSLIIQQERQERQEKHESGHTSQTEIKVLASNTDKQSNWKNDQNWKGYGRGFSGRGQGRGRGRNPNQGKQCSYCHKMNHTIEECYSKHGYPPWYKKGDNSGQNSFAQNQWGNTNVCTTTADPQNNQHSQSNQQSNFNSIQSTFTPEQMKRLLEMLDSTEKSSHSVSQIHKDIIEDXQGMFSWIMDTGATDHVTHDKNSFTTFYKIKPISVRLPNKSTVTAHYAGTVQFSPNFTIFNVLYIPDFTFNLISVQSLTKDTNCILTFSSELCKIQDRTTLRMIGCVKVYNGLYYLQNAAKEPNSYAEARGSLEWVDAMNKEIKALEYNGTWFLTKLPPGKKAIGCKWVYKIKHRADGTVERYKSRLVAKGYTQQRV 586

[Close]

BLAST of rna-XM_014656228.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3VZD5|A0A1S3VZD5_VIGRR (uncharacterized protein LOC106779879 OS=Vigna radiata var. radiata OX=3916 GN=LOC106779879 PE=4 SV=1)

HSP 1 Score: 666.381 bits (1718), Expect = 0.000e+0
Identity = 321/520 (61.73%), Postives = 405/520 (77.88%), Query Frame = 0

Query:    1 MANTEQTNNPS----SPYYLHPGENPGISLISQILDESNYTSWSRSMRRALLSKNKLKFINGEIKKPKREDALYDAWERNNMMVLSWIIKTLSVHIAESVVYVEDAQELWEELKERFSKGDHFKFSDLLQEIHSIKQGERTVNQYFTYLKILWEELEFLRPIPSCSYKIPYSCDLSKAGHKYREMEHVICFLKGLNDCYNTVRTQILLMEPLPNINRVFSLIIQQERQERQEKHESGHTSQTEIKVLASNTDKQSNWKNDQNWKGYGRGFSGRGQGRGRGRNPNQGKQCSYCHKMNHTIEECYSKHGYPPWYKKGDNSGQNSFAQNQWGNTNVCTTTADPQNNQHSQSNQQSNFNSIQSTFTPEQMKRLLEMLDSTEKSSHSVSQIHKDIIEDXQGMFSWIMDTGATDHVTHDKNSFTTFYKIKPISVRLPNKSTVTAHYAGTVQFSPNFTIFNVLYIPDFTFNLISVQSLTKDTNCILTFSSELCKIQDRTTLRMIGCVKVYNGLYYLQNAAKEPNSYA 516
            M + +Q++NP+    SP+YLHP ENPG +LISQ+L+E+NY+SWSR+MRRALLSKNK+KFI+G IKKPK+ + L+D W+R NMMVLSWIIKTLS  IAESV+YVE+A+ELW+ELKERFSKGD+FK SDLLQ+IHSIKQGER+VNQ+FT LKILWEELE LRPIP+C+ KIP SC+LSK   KY ++EHVICFLKGLND YNTVRTQILLMEPLP+IN VFSLI+QQERQER   ++   T+    K+LA+ T++ ++WK DQ WK  GRG    GQGRGRGRNPN GKQCSYC+KMNHT++ECYSKHGYPPWYKK DN   N   +  W + N+  +   P+  Q   ++  + FNS+    T EQ+ +LL M++  + S+H ++Q+H +  ED  G  SWI+DTGATDHVT++K ++ TFYKIKPI+VRLPN   +TA +AGTVQFS +F IFNVLYIP+F+FNLISVQSL KD +C LTFSS+ C+I+  +TL+MIG    + GLYYLQ  +     +A
Sbjct:    1 MDSKDQSDNPANDTTSPFYLHPEENPGSTLISQVLNETNYSSWSRNMRRALLSKNKIKFIDGSIKKPKKTETLFDTWQRCNMMVLSWIIKTLSPQIAESVIYVEEAKELWDELKERFSKGDYFKISDLLQDIHSIKQGERSVNQFFTDLKILWEELESLRPIPNCTCKIPCSCELSKISLKYTDIEHVICFLKGLNDNYNTVRTQILLMEPLPSINHVFSLIMQQERQERPGTNQFAETT----KILANVTNRNNSWKGDQPWKNQGRGSGPYGQGRGRGRNPNHGKQCSYCNKMNHTVDECYSKHGYPPWYKKTDN---NQEKKGGWNSANIYQSAPGPETFQTGSTS--TTFNSL----TSEQIGKLLRMIEKADDSTHKINQMHTNEKEDKPGTLSWIIDTGATDHVTYNKGNYITFYKIKPITVRLPNNIVITAEHAGTVQFSKDFVIFNVLYIPNFSFNLISVQSLIKDLDCRLTFSSKGCQIRKNSTLKMIGSANSHKGLYYLQAFSNPDQDFA 507

[Close]

BLAST of rna-XM_014656228.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3VAY2|A0A1S3VAY2_VIGRR (uncharacterized protein LOC106773217 OS=Vigna radiata var. radiata OX=3916 GN=LOC106773217 PE=4 SV=1)

HSP 1 Score: 666.381 bits (1718), Expect = 0.000e+0
Identity = 324/508 (63.78%), Postives = 400/508 (78.74%), Query Frame = 0

Query:    1 MANTEQTNNPSSPYYLHPGENPGISLISQILDESNYTSWSRSMRRALLSKNKLKFINGEIKKPKR-EDALYDAWERNNMMVLSWIIKTLSVHIAESVVYVEDAQELWEELKERFSKGDHFKFSDLLQEIHSIKQGERTVNQYFTYLKILWEELEFLRPIPSCSYKIPYSCDLSKAGHKYREMEHVICFLKGLNDCYNTVRTQILLMEPLPNINRVFSLIIQQERQERQEKHE-SGHTSQTEIKVLASNTDKQSNWKNDQNWKGYGRGFSGRGQGRGRGRNPNQGKQCSYCHKMNHTIEECYSKHGYPPWYKKGDNSGQNSFAQNQWGNTNVCTTTADPQNNQHSQSNQQSNFNSIQSTFTPEQMKRLLEMLDSTEKSSHSVSQIHKDIIEDXQGMFSWIMDTGATDHVTHDKNSFTTFYKIKPISVRLPNKSTVTAHYAGTVQFSPNFTIFNVLYIPDFTFNLISVQSLTKDTNCILTFSSELCKIQDRTTLRMIGCVKVYNGLYYLQ 506
            M + +Q+ NP+SP+YLHPGENPG++LISQ+L+ESNY SWSR MRRALLSKNK+KFI+G IKKP+  +D L+DAWER N+MVLSWI KTLS  IAESV+YV++A++LW+ELKERFSKGD+FK SDLLQ IHSIK+GER+V+Q+FT LKILWEELEFLRPIP C+ K P SC+LSK   KYRE+EHVICF KGLN+ YNTVRTQILLMEPLPNINRVFSLI+QQERQE+ +      HT+    +VLA+ TD+ +NWK +Q WKG GRG      GRGRGRNPN GKQCSYC+KMNHTI+ECYSKHG+PPWYKK  N G N   ++ W +TNVC      Q+N  S+   Q   N+  +  TPEQ+++LL+M++  E+  H+++Q+ +   ED  G+ SWI+DT ATDHVTH++  + TFYKIKPI+V+LPN S VTA + GT+QFS +F IFNVLYIP F+FNLISVQSL KD NC L FSSELC+I++ TTL MIG    + GLYYLQ
Sbjct:    1 MEDKDQSANPASPFYLHPGENPGLTLISQVLNESNYPSWSRCMRRALLSKNKIKFIDGSIKKPQNNKDPLFDAWERCNVMVLSWITKTLSPQIAESVIYVKEAKDLWDELKERFSKGDYFKISDLLQVIHSIKKGERSVSQFFTDLKILWEELEFLRPIPKCTCKTPCSCELSKVSLKYREIEHVICFSKGLNETYNTVRTQILLMEPLPNINRVFSLIMQQERQEKSDVGTFIQHTASETTRVLANITDRNNNWKTEQPWKGQGRGAGPYNPGRGRGRNPNHGKQCSYCNKMNHTIDECYSKHGFPPWYKK--NKG-NQERKSGWNSTNVC------QSNTGSEIANQGGSNTNFNKLTPEQVEKLLKMIEKVEEPIHNINQMQRKDQEDKPGISSWIIDTVATDHVTHERKYYVTFYKIKPITVKLPNNSIVTAEHGGTIQFSKDFVIFNVLYIPTFSFNLISVQSLAKDLNCSLIFSSELCQIRENTTLXMIGYANPHKGLYYLQ 499

[Close]

BLAST of rna-XM_014656228.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3U3H2|A0A1S3U3H2_VIGRR (uncharacterized protein LOC106761528 OS=Vigna radiata var. radiata OX=3916 GN=LOC106761528 PE=4 SV=1)

HSP 1 Score: 653.67 bits (1685), Expect = 0.000e+0
Identity = 326/506 (64.43%), Postives = 397/506 (78.46%), Query Frame = 0

Query:    2 ANTEQTNNPSSPYYLHPGENPGISLISQILDESNYTSWSRSMRRALLSKNKLKFINGEIKKPKREDALYDAWERNNMMVLSWIIKTLSVHIAESVVYVEDAQELWEELKERFSKGDHFKFSDLLQEIHSIKQGERTVNQYFTYLKILWEELEFLRPIPSCSYKIPYSCDLSKAGHKYREMEHVICFLKGLNDCYNTVRTQILLMEPLPNINRVFSLIIQQERQERQEKHESGHTSQTEIKVLASNTDKQSNWKNDQNWKGYGRGFSGRGQGRGRGRNPNQGKQCSYCHKMNHTIEECYSKHGYPPWYKKGDNSGQNSFAQNQWGNTNVCTTTADPQNNQHSQSNQQSNFNSIQSTFTPEQMKRLLEMLDSTE-KSSHSVSQIHKDIIEDXQGMFSWIMDTGATDHVTHDKNSFTTFYKIKPISVRLPNKSTVTAHYAGTVQFSPNFTIFNVLYIPDFTFNLISVQSLTKDTNCILTFSSELCKIQDRTTLRMIGCVKVYNGLYYLQ 506
             N++ T NPSSPYYLHPGENPGI+LISQIL +SNY+SWSR+++RALLSKNK+KFI+G I+KP R D L++AWER + MVLSWIIKTLS  IA+SV+Y + AQELWEELK+ FSKGD+FK SDLLQ+IHSIKQGER ++ Y+T LKILWEELE LRPIP+C+   P +CDLSK   +YRE EHVICFLKGLND Y TVRTQILLMEPLPNIN+VFSL+IQQERQ +    + G T+ T  K+LAS  DK        NW+G GRG + RGQGRGRGRNPN GKQCS+CHKMNHTI+ECY KHG+PPWYKK DN        N+W   N C   ++    Q +Q  +QSN       FTPEQM++LL+++++T+ ++ HS+SQ+ ++   + QG FSWI+DTGATDHVTH+K  F TF KIKPI+V+LPN S VTA YAGT+QFS NF IFNVLYIP+F+FNLISVQSLT+D NC+LTFSS+ C+IQD +TL+MIG  KV  GLYYLQ
Sbjct:    4 TNSDPTTNPSSPYYLHPGENPGITLISQILTKSNYSSWSRNLKRALLSKNKVKFIDGSIQKPTRTDKLFEAWERCDTMVLSWIIKTLSPQIADSVLYADTAQELWEELKDHFSKGDYFKISDLLQDIHSIKQGERNISHYYTDLKILWEELESLRPIPTCTCPNPCTCDLSKISLRYREAEHVICFLKGLNDTYQTVRTQILLMEPLPNINKVFSLLIQQERQYQ----DRGGTNDT-FKILASTVDK-------TNWRGQGRGTNSRGQGRGRGRNPNYGKQCSHCHKMNHTIDECYPKHGFPPWYKKNDNQNSQDRGHNEWSYANACKEDSNSTQTQSAQQEKQSN---PMQGFTPEQMQKLLQIIENTQTQNIHSISQVQRNTPGENQGTFSWIIDTGATDHVTHEKKYFITFQKIKPITVKLPNNSVVTAQYAGTIQFSENFIIFNVLYIPEFSFNLISVQSLTRDLNCVLTFSSKSCQIQDSSTLKMIGHAKVLKGLYYLQ 494

[Close]

BLAST of rna-XM_014656228.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3VMX5|A0A1S3VMX5_VIGRR (uncharacterized protein LOC106776772 OS=Vigna radiata var. radiata OX=3916 GN=LOC106776772 PE=4 SV=1)

HSP 1 Score: 641.343 bits (1653), Expect = 0.000e+0
Identity = 329/573 (57.42%), Postives = 419/573 (73.12%), Query Frame = 0

Query:    1 MANTEQTNNPSSPYYLHPGENPGISLISQILDESNYTSWSRSMRRALLSKNKLKFINGEIKKPKREDALYDAWERNNMMVLSWIIKTLSVHIAESVVYVEDAQELWEELKERFSKGDHFKFSDLLQEIHSIKQGERTVNQYFTYLKILWEELEFLRPIPSCSYKIPYSCDLSKAGHKYREMEHVICFLKGLNDCYNTVRTQILLMEPLPNINRVFSLIIQQERQERQEKHESGHTSQTEIKVLASNTDKQSNWKNDQNWKGYGRGFSGRGQGRGRGRNPNQGKQCSYCHKMNHTIEECYSKHGYPPWYKKGDNSGQNSFAQNQWGNTNVCTTTADPQNNQHSQS----NQQSNFNSIQSTFTPEQMKRLLEMLDSTEKSS-HSVSQIHKDIIEDXQGMFSWIMDTGATDHVTHDKNSFTTFYKIKPISVRLPNKSTVTAHYAGTVQFSPNFTIFNVLYIPDFTFNLISVQSLTKDTNCILTFSSELCKIQDRTTLRMIGCVKVYNGLYYLQNAAKEPNSYAEARGSLEWVDAMNKEIKALEYNGTWFLTKLPPGKKAIG--CKWVYKIKHRAD 566
            M  ++QT NP+SP+YLHPGENPG++LI+Q+L+E+NY+SWSR+MRRAL+SKNK+KFI+G IK+P++ D  Y AWER N+M+LSW+ KTLS HIAESV+YVE+A+ELW+ELKERFSKGD+FK SDLLQ+IHSIKQGER V+Q+FT LKILWEELE LRPIP C+ +IP +CDLSK   KYREMEHVICFLKGLND YNTV+TQILLM+PLPN+N VFSLIIQQERQE+Q        S T+ ++L +  ++ + WK DQ+W+  GR    RGQGRGRGRNPN GKQCSYC+KMNHT++ECYSKHGYPPWYKK D        ++ W   N        QNN  S+S      Q+N +   + FTPEQM++LL+M++ TE+SS H ++Q+ +   E+  G  SW++DTGATDHVTHDK +FT FYKIKPI++ LPNK+ +T  YAGT++F+ NF +FNVLYIP+F FNLISVQSL KD NC L FS E C+I++  +L+ IG  K +NGLYYLQ+  K      E R     +D      K  + N  W L    PG   +   C+    +K + D
Sbjct:    1 MEQSDQTFNPASPFYLHPGENPGLTLITQVLNENNYSSWSRAMRRALVSKNKVKFIDGSIKRPQKNDDTYHAWERCNVMILSWMTKTLSPHIAESVIYVEEAKELWDELKERFSKGDYFKISDLLQDIHSIKQGERGVSQFFTALKILWEELESLRPIPVCTCEIPCNCDLSKVSLKYREMEHVICFLKGLNDSYNTVKTQILLMDPLPNVNHVFSLIIQQERQEKQ--------SNTDSRILVNMAERNNQWKPDQSWRNQGRATGIRGQGRGRGRNPNYGKQCSYCNKMNHTVDECYSKHGYPPWYKKED-------KKSDWNTVNAF------QNNNDSESILKTQHQTNNSCNPNLFTPEQMQKLLKMIEKTEESSIHKINQVQRQETENKPGNSSWVIDTGATDHVTHDKTNFTIFYKIKPITITLPNKTVITTEYAGTIRFTENFILFNVLYIPNFCFNLISVQSLIKDLNCNLIFSYENCQIRENXSLKTIGYAKPWNGLYYLQDFPK-----PEQRD----IDKAVFSFKKTDVN-LWHLRXXHPGHHVVKRICEMFPYVKIKTD 542

[Close]

BLAST of rna-XM_014656228.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3VY72|A0A1S3VY72_VIGRR (uncharacterized protein LOC106779432 OS=Vigna radiata var. radiata OX=3916 GN=LOC106779432 PE=4 SV=1)

HSP 1 Score: 631.713 bits (1628), Expect = 0.000e+0
Identity = 315/511 (61.64%), Postives = 398/511 (77.89%), Query Frame = 0

Query:    1 MANTEQTNNPSSPYYLHPGENPGISLISQILDESNYTSWSRSMRRALLSKNKLKFINGEIKKPKREDALYDAWERNNMMVLSWIIKTLSVHIAESVVYVEDAQELWEELKERFSKGDHFKFSDLLQEIHSIKQGERTVNQYFTYLKILWEELEFLRPIPSCSYKIPYSCDLSKAGHKYREMEHVICFLKGLNDCYNTVRTQILLMEPLPNINRVFSLIIQQERQERQEKHESGHTSQTEIKVLASNTDKQSNWKNDQNWKGYGRGFSGRGQGRGRGRNPNQGKQCSYCHKMNHTIEECYSKHGYPPWYKKGDNSGQNSFAQNQWGNTNVCTTTADPQNNQHSQSNQQSNFNSIQSTFTPEQMKRLLEMLDSTEKSS-HSVSQIHKDIIEDXQGMFSWIMDTGATDHVTHDKNSFTTFYKIKPISVRLPNKSTVTAHYAGTVQFSPNFTIFNVLYIPDFTFNLISVQSLTKDTNCILTFSSELCKIQDRTTLRMIGCVKVYNGLYYLQNAAK 510
            M +++QT NP+SP+YLHPGENPG++LI+Q+L+E+NY+SWSR+MRRAL+SKNK+KFI+G IK+P++ D  Y+AWER N+M+LSW+ KTLS HIAESV+YVE+A+ELW+ELKERFSKGD+FK SDLLQ+IHSIKQGER V+Q+FT LKILWEELE LRPIP C+ + P  CDLSK   KYREMEHVICFLKGLND YNTV+TQILLM+PLPN+NRVFSLIIQQERQE+Q          TE K+L +  ++ + WK DQ+W+ +GRG   RGQGRGRGRNPN GKQCSYC+KMNHT++ECYSKHGYPPWYKK D        ++ W   N      D ++   +Q   Q+N +S  + FTPEQM++LL+M++ TE+S+ H ++Q+ +   ++  G  SWI+DTGATDHVTHDK  FT FYKIKPI++ LPNK+ +TA YAGT+ F+ NF +FNVLYIP F FNLISVQSL KD NC L FS E  +I+   +L+  G  K +NGLYYLQ+  K
Sbjct:    1 MEHSDQTFNPASPFYLHPGENPGLTLITQVLNENNYSSWSRAMRRALVSKNKVKFIDGSIKRPQKNDDTYEAWERCNVMILSWMTKTLSPHIAESVIYVEEAKELWDELKERFSKGDYFKISDLLQDIHSIKQGERGVSQFFTDLKILWEELESLRPIPVCTCENPCCCDLSKVSLKYREMEHVICFLKGLNDSYNTVKTQILLMDPLPNVNRVFSLIIQQERQEKQ---------NTETKILVNMAERSNQWKPDQSWRNHGRGTGMRGQGRGRGRNPNYGKQCSYCNKMNHTVDECYSKHGYPPWYKKED-------KRSDWNTVNAFQNNNDTESTLKTQ--HQTNNSSNPNLFTPEQMQKLLQMIEKTEESAIHKINQVQRQETQNKPGNSSWILDTGATDHVTHDKTHFTIFYKIKPITITLPNKTVITAEYAGTIHFNENFALFNVLYIPSFCFNLISVQSLVKDLNCNLIFSCENYQIRQNHSLKTTGFAKTWNGLYYLQDFPK 493

[Close]

BLAST of rna-XM_014656228.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3VBK5|A0A1S3VBK5_VIGRR (uncharacterized protein LOC106773420 OS=Vigna radiata var. radiata OX=3916 GN=LOC106773420 PE=4 SV=1)

HSP 1 Score: 624.009 bits (1608), Expect = 0.000e+0
Identity = 311/485 (64.12%), Postives = 385/485 (79.38%), Query Frame = 0

Query:    5 EQTNNPSSPYYLHPGENPGISLISQILDESNYTSWSRSMRRALLSKNKLKFINGEIKKPKREDALYDAWERNNMMVLSWIIKTLSVHIAESVVYVEDAQELWEELKERFSKGDHFKFSDLLQEIHSIKQGERTVNQYFTYLKILWEELEFLRPIPSCSYKIPYSCDLSKAGHKYREMEHVICFLKGLNDCYNTVRTQILLMEPLPNINRVFSLIIQQERQERQEKHESGHTSQTEIKVLASNTDKQSNWKNDQNWKGYGRGFSGRGQGRGRGRNPNQGKQCSYCHKMNHTIEECYSKHGYPPWYKKGDNSGQNSFAQNQWGNTNVCTTTADPQNNQHSQSNQQSNFNSIQSTFTPEQMKRLLEMLDSTEKSSHSVSQIHKDIIEDXQGMFSWIMDTGATDHVTHDKNSFTTFYKIKPISVRLPNKSTVTAHYAGTVQFSPNFTIFNVLYIPDFTFNLISVQSLTKDTNCILTFSSELCKIQDRTT 489
            +Q+NNP+SP+YLHPGENPG+++ISQ+L+E+NY+SWSRSMRRALLSKNK+KFI+G IKKPKR   L+D+WER+NMMVLSWIIKTLS  I ESV+YVE+A+ELW+EL+ERFSKGD+FK SDLLQ+IHSIKQGE++VNQ+FT LKILWEELE LRPIPSC+ KIP SC+LSK   KYRE+EHVICFLKGLND Y+TVRTQILLMEPLP+INRVFSLI+QQERQER +   +     T  K+LA+  ++ SNW  DQ WK  G    G GQGRGRGRNPN GKQCSYC+KMNHT++ECYSKHGYPPWYKK D    N   +  W + N C +T  P+  Q   ++   +  + Q      QM++LL++++  ++ SH+V+ +  +  E   G  SWI+DTGATDHVTH+K +F TFYKIKPI+VRLPN + +TA YAGTVQF  +F +FNVLYIPDF+FNLISVQSLTKD NC LTFSS+ C+I++  T
Sbjct:    4 DQSNNPASPFYLHPGENPGLTVISQVLNETNYSSWSRSMRRALLSKNKIKFIDGSIKKPKRTKNLFDSWERSNMMVLSWIIKTLSPQIVESVIYVEEAKELWDELRERFSKGDYFKISDLLQDIHSIKQGEKSVNQFFTDLKILWEELESLRPIPSCTCKIPCSCELSKISLKYREIEHVICFLKGLNDTYSTVRTQILLMEPLPHINRVFSLIMQQERQERPDIAHNQLAKTT--KILATVNNRGSNWNGDQTWKNQG---RGSGQGRGRGRNPNYGKQCSYCNKMNHTVDECYSKHGYPPWYKKTDG---NPEGRGGWSSANACQSTFGPETVQKDSTSTTLSSLTAQ------QMQKLLKLIEKADEPSHNVNHMQSNDKEGDPGTLSWIIDTGATDHVTHEKENFVTFYKIKPITVRLPNNTVITAKYAGTVQFCSSFILFNVLYIPDFSFNLISVQSLTKDLNCSLTFSSKDCQIRENAT 474

[Close]

BLAST of rna-XM_014656228.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3VFY7|A0A1S3VFY7_VIGRR (uncharacterized protein LOC106774660 OS=Vigna radiata var. radiata OX=3916 GN=LOC106774660 PE=4 SV=1)

HSP 1 Score: 597.816 bits (1540), Expect = 0.000e+0
Identity = 294/453 (64.90%), Postives = 370/453 (81.68%), Query Frame = 0

Query:    5 EQTNNPSSPYYLHPGENPGISLISQILDESNYTSWSRSMRRALLSKNKLKFINGEIKKPKREDALYDAWERNNMMVLSWIIKTLSVHIAESVVYVEDAQELWEELKERFSKGDHFKFSDLLQEIHSIKQGERTVNQYFTYLKILWEELEFLRPIPSCSYKIPYSCDLSKAGHKYREMEHVICFLKGLNDCYNTVRTQILLMEPLPNINRVFSLIIQQERQERQEKHESGHTSQTEIKVLASNTDKQSNWKNDQNWKGYGRGFSGRGQGRGRGRNPNQGKQCSYCHKMNHTIEECYSKHGYPPWYKKGDNSGQNSFAQNQWGNTNVCTTTADPQNNQHSQSNQQSNFNSIQSTFTPEQMKRLLEMLDSTEKSSHSVSQIHKDIIEDXQGMFSWIMDTGATDHVTHDKNSFTTFYKIKPISVRLPNKSTVTAHYAGTVQFSPNFTIFNVLYIPDF 457
            +Q+ NPSSPYYLHPGENPG+ L++Q+L+E+NY+SWSRSMRR LLSKNK+KF++G IKKP++ D L++AWER NMM+LSWI K LS HIAESV+YVE+A++LW+ELKERFSKGD+FK SDLLQ+IHSIKQGER V+Q+FT LKILWEELE LRPIP+C+ ++P SCDLS+   KYREMEHVICFLKGLND Y+TVRTQILLM+PLPNINRVFSLI+QQERQE+Q           +IK LAS TD+ + W+N  N    GRG   RGQGRGRGRNPN GKQCSYC+KMNHTI+ECYSKHGYPPWYKKGDN   N   ++ W   N+C  + +P+  Q++   QQ+  NS+ ++FT EQM++LL M+D  ++SSH ++Q+ ++  E+ QG  SWI+DTGATDHVTHDK +F TF+KI+P+S++LPN +T+TA +AGT+QFS +F IFNVLYIPDF
Sbjct:    2 DQSCNPSSPYYLHPGENPGLMLVTQVLNENNYSSWSRSMRRTLLSKNKIKFVDGFIKKPQKIDTLFEAWERCNMMILSWITKALSPHIAESVIYVEEAKDLWDELKERFSKGDYFKISDLLQDIHSIKQGERGVSQFFTDLKILWEELESLRPIPTCTCQVPCSCDLSRVFLKYREMEHVICFLKGLNDSYSTVRTQILLMDPLPNINRVFSLIMQQERQEKQ--------GVADIKALASMTDRNNQWRNQGN---QGRGSGTRGQGRGRGRNPNYGKQCSYCNKMNHTIDECYSKHGYPPWYKKGDN---NQEKRSDWSFVNICQNSTEPEGTQNT---QQTGNNSVFNSFTAEQMEKLLRMIDRADESSHKINQVQRNETENRQGNLSWIIDTGATDHVTHDKRNFVTFHKIRPVSIKLPNNTTLTAEHAGTMQFSKDFIIFNVLYIPDF 437

[Close]

BLAST of rna-XM_014656228.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3TAU5|A0A1S3TAU5_VIGRR (uncharacterized protein LOC106753581 OS=Vigna radiata var. radiata OX=3916 GN=LOC106753581 PE=4 SV=1)

HSP 1 Score: 561.607 bits (1446), Expect = 0.000e+0
Identity = 282/450 (62.67%), Postives = 351/450 (78.00%), Query Frame = 0

Query:    2 ANTEQTNNPSSPYYLHPGENPGISLISQILDESNYTSWSRSMRRALLSKNKLKFINGEIKKPKREDALYDAWERNNMMVLSWIIKTLSVHIAESVVYVEDAQELWEELKERFSKGDHFKFSDLLQEIHSIKQGERTVNQYFTYLKILWEELEFLRPIPSCSYKIPYSCDLSKAGHKYREMEHVICFLKGLNDCYNTVRTQILLMEPLPNINRVFSLIIQQERQERQEKHESGHTSQTEIKVLASNTDKQSNWKNDQNWKGYGRGFSGRGQGRGRGRNPNQGKQCSYCHKMNHTIEECYSKHGYPPWYKKGDN-SGQNSFAQNQWGNTNVCTTTADPQNNQHSQSNQQSNFNSIQSTFTPEQMKRLLEMLDSTE-KSSHSVSQIHKDIIEDXQGMFSWIMDTGATDHVTHDKNSFTTFYKIKPISVRLPNKSTVTAHYAGTVQFSPNFTIF 449
            +  + T NPSSPYYLHPGENPGI+LISQIL ESNY+SWSR+++RALLSKNK KFI+G I+KP R D L++AWER + MVLSWIIKTLS  IA+SV+Y + AQELWE+LKERFSKGD+FK SDLLQ+IHSIKQGE+ +N Y+T LKILWEELE LRPIP+C+   P  CDLSK   +YRE EHVICFLKGLND Y TVRTQILLMEPLPNIN+VFSL++QQERQ +    + G TS T  K+LAS +DK        NW+G GRG S RGQ RGRGRNPN GKQC++CHKMNHTI+ECYSKHG+PPWYKK D+ + Q+    N+W   N C    D ++ Q   ++Q++  N +Q  FTPEQM++L +++++T+ +++HS+SQ+ ++   + QG FSWI+DTGATDHVTH+K  F TF KIKPI+V+LPN S VTA YAGT+QFS +F I 
Sbjct:    4 STADPTTNPSSPYYLHPGENPGITLISQILTESNYSSWSRNLKRALLSKNKFKFIDGSIQKPARTDKLFEAWERCDTMVLSWIIKTLSPQIADSVLYXDTAQELWEDLKERFSKGDYFKISDLLQDIHSIKQGEQNINHYYTDLKILWEELESLRPIPTCTCPDPCVCDLSKISLRYRENEHVICFLKGLNDTYQTVRTQILLMEPLPNINKVFSLLMQQERQHQ----DRGGTSDT-FKILASTSDK-------TNWRGQGRGISSRGQXRGRGRNPNYGKQCAHCHKMNHTIDECYSKHGFPPWYKKNDHQNSQDRGGHNEWSYANAC--KEDSKSTQTQSTHQENQSNPMQ-VFTPEQMQKLXQIIENTQTQNTHSISQVQRNTSGENQGTFSWIIDTGATDHVTHEKKYFITFQKIKPITVKLPNNSVVTAQYAGTIQFSEDFIIL 438

[Close]

BLAST of rna-XM_014656228.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0FL22|A0A3Q0FL22_VIGRR (uncharacterized protein LOC111242680 OS=Vigna radiata var. radiata OX=3916 GN=LOC111242680 PE=4 SV=1)

HSP 1 Score: 558.14 bits (1437), Expect = 0.000e+0
Identity = 267/418 (63.88%), Postives = 328/418 (78.47%), Query Frame = 0

Query:    1 MANTEQ----TNNPSSPYYLHPGENPGISLISQILDESNYTSWSRSMRRALLSKNKLKFINGEIKKPKREDALYDAWERNNMMVLSWIIKTLSVHIAESVVYVEDAQELWEELKERFSKGDHFKFSDLLQEIHSIKQGERTVNQYFTYLKILWEELEFLRPIPSCSYKIPYSCDLSKAGHKYREMEHVICFLKGLNDCYNTVRTQILLMEPLPNINRVFSLIIQQERQERQEKHESGHTSQTEIKVLASNTDKQSN-WKNDQNWKGYGRGFSGRGQGRGRGRNPNQGKQCSYCHKMNHTIEECYSKHGYPPWYKKGDNSGQNSFAQNQWGNTNVCTTTADPQNNQHSQSNQQSNFNSIQSTFTPEQMKRLLEMLDSTEKSSHSVSQIHKDIIEDXQGMFSWIMDTGATDHVTHDKNSF 413
            M +T+Q     N+PSSP+YLHPGENPG++LISQ+L E+NY+SWSRSMRRALLSKNK+KFI+G IKKPKR +AL+D WER NMMVLSWIIKTLS  IAESV+YVE+A+ELW+EL+ERFSKGD+FK SDLLQ+IHSI QGERTVNQ+FT LKILWEELE LRPIP+C+ KIP SC+LSK   KYRE+EHVICFLKGLND YNTVRTQILLMEPLPNINRVFSLI+QQERQER   ++   T+    K+L +  D+  N WKNDQ+WK   RG    GQGRGR RNPN GKQCSYC+KMNHT++ECYSKHGYPPWYKK DNS +    +  W + N+C +   P+  Q   +N   N      + T +QM++LL+M++  + S+H ++Q++++  ED  G  SWI+DTGA DHVT+DK +F
Sbjct:    1 MDHTDQHDNPANDPSSPFYLHPGENPGLTLISQVLSETNYSSWSRSMRRALLSKNKIKFIDGSIKKPKRTEALFDTWERCNMMVLSWIIKTLSPQIAESVIYVEEAKELWDELRERFSKGDYFKISDLLQDIHSITQGERTVNQFFTDLKILWEELESLRPIPNCTCKIPCSCELSKISLKYREIEHVICFLKGLNDNYNTVRTQILLMEPLPNINRVFSLIMQQERQERSNANQFAETT----KILVNTADRNINSWKNDQSWKNQDRGTGANGQGRGRVRNPNHGKQCSYCNKMNHTVDECYSKHGYPPWYKKTDNSQEK---KGGWNSANICHSAPGPETVQKGSTNTALN------SLTQDQMEKLLKMIEKADDSTHKINQMNRNEKEDKTGTLSWIIDTGAIDHVTYDKGNF 405

The following BLAST results are available for this feature:

BLAST of rna-XM_014656228.1 vs. UniProtKB/Swiss-Prot
BLAST of rna-XM_014656228.1 vs. Araport11
BLAST of rna-XM_014656228.1 vs. UniProtKB/TrEMBL

BLAST of rna-XM_014656228.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 4


Match Name	E-value	Identity	Description
sp\|P92520\|M820_ARATH	1.091e-14	46.67	Uncharacterized mitochondrial protein AtMg00820 OS...	[more]
sp\|P10978\|POLX_TOBAC	1.536e-11	40.70	Retrovirus-related Pol polyprotein from transposon...	[more]
sp\|Q94HW2\|POLR1_ARATH	4.121e-11	43.59	Retrovirus-related Pol polyprotein from transposon...	[more]
sp\|Q9ZT94\|POLR2_ARATH	1.981e-10	43.59	Retrovirus-related Pol polyprotein from transposon...	[more]

BLAST of rna-XM_014656228.1 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 4


Match Name	E-value	Identity	Description
AT1G21280.1	4.190e-34	33.18	\| Copia-like polyprotein/retrotransposon \| Chr1:74...	[more]
AT4G23160.3	1.190e-24	57.47	\| cysteine-rich RECEPTOR-like kinase \| Chr4:121294...	[more]
AT4G23160.2	1.190e-24	57.47	\| cysteine-rich RECEPTOR-like kinase \| Chr4:121294...	[more]
ATMG00820.1	1.116e-15	46.67	\| Reverse transcriptase (RNA-dependent DNA polymer...	[more]

BLAST of rna-XM_014656228.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
tr\|A0A1S3V0N0\|A0A1S3V0N0_VIGRR	0.000e+0	100.00	uncharacterized protein LOC106770416 OS=Vigna radi...	[more]
tr\|A0A1S3VZD5\|A0A1S3VZD5_VIGRR	0.000e+0	61.73	uncharacterized protein LOC106779879 OS=Vigna radi...	[more]
tr\|A0A1S3VAY2\|A0A1S3VAY2_VIGRR	0.000e+0	63.78	uncharacterized protein LOC106773217 OS=Vigna radi...	[more]
tr\|A0A1S3U3H2\|A0A1S3U3H2_VIGRR	0.000e+0	64.43	uncharacterized protein LOC106761528 OS=Vigna radi...	[more]
tr\|A0A1S3VMX5\|A0A1S3VMX5_VIGRR	0.000e+0	57.42	uncharacterized protein LOC106776772 OS=Vigna radi...	[more]
tr\|A0A1S3VY72\|A0A1S3VY72_VIGRR	0.000e+0	61.64	uncharacterized protein LOC106779432 OS=Vigna radi...	[more]
tr\|A0A1S3VBK5\|A0A1S3VBK5_VIGRR	0.000e+0	64.12	uncharacterized protein LOC106773420 OS=Vigna radi...	[more]
tr\|A0A1S3VFY7\|A0A1S3VFY7_VIGRR	0.000e+0	64.90	uncharacterized protein LOC106774660 OS=Vigna radi...	[more]
tr\|A0A1S3TAU5\|A0A1S3TAU5_VIGRR	0.000e+0	62.67	uncharacterized protein LOC106753581 OS=Vigna radi...	[more]
tr\|A0A3Q0FL22\|A0A3Q0FL22_VIGRR	0.000e+0	63.88	uncharacterized protein LOC111242680 OS=Vigna radi...	[more]

InterPro

Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029472	Retrotransposon Copia-like, N-terminal	PFAM	PF14244	Retrotran_gag_3	coord: 17..64 e-value: 6.8E-19 score: 67.4
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 538..584 e-value: 9.6E-10 score: 38.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 333..354
None	No IPR available	PANTHER	PTHR37610	CCHC-TYPE DOMAIN-CONTAINING PROTEIN	coord: 9..212

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr08:25639643..25641403+
coding sequence from alignment at chr08:25639643..25641403+

mRNA sequence

>rna-XM_014656228.1_VrVC1973A-SNU_v1 ID=rna-XM_014656228.1_VrVC1973A-SNU_v1; Name=rna-XM_014656228.1; organism=Vigna radiata; type=mRNA; length=1761bp
ATGGCCAATACGGAACAAACCAACAATCCTTCCAGCCCCTATTATCTTCA
CCCGGGAGAAAACCCAGGTATTTCACTTATTTCACAGATTCTTGATGAAT
CAAATTATACTTCTTGGAGCAGAAGTATGAGAAGGGCGCTATTATCCAAA
AACAAGCTGAAGTTTATAAATGGAGAGATCAAGAAACCGAAAAGAGAGGA
TGCTCTTTATGATGCTTGGGAAAGGAATAATATGATGGTATTGTCTTGGA
TTATCAAGACTCTCTCGGTTCACATAGCTGAAAGTGTTGTCTATGTTGAA
GATGCTCAAGAACTATGGGAGGAGTTAAAAGAGAGGTTCTCAAAGGGAGA
CCATTTCAAATTTTCAGATTTGCTGCAAGAAATTCACTCCATCAAGCAAG
GGGAGAGAACTGTGAATCAGTATTTCACATATTTGAAAATACTGTGGGAA
GAACTCGAATTTTTGAGACCCATTCCTAGTTGTAGCTACAAGATTCCTTA
TAGCTGTGATCTTTCAAAAGCTGGGCACAAATATAGGGAGATGGAACATG
TTATATGTTTCTTGAAAGGCCTAAATGATTGCTATAATACTGTTAGAACG
CAGATTTTGCTAATGGAACCCCTACCCAACATTAATCGGGTCTTCTCCCT
CATCATACAACAAGAGAGGCAAGAAAGGCAAGAAAAACATGAATCTGGAC
ACACTAGCCAGACTGAAATTAAGGTGCTTGCCAGCAACACTGACAAACAA
AGTAATTGGAAGAATGATCAAAACTGGAAGGGCTATGGACGTGGTTTTTC
TGGTCGTGGACAAGGAAGGGGCAGAGGAAGAAATCCTAACCAAGGAAAGC
AATGTTCCTATTGCCATAAAATGAATCATACCATTGAGGAATGTTATTCT
AAACATGGATATCCTCCATGGTACAAGAAAGGTGATAATAGCGGACAGAA
CAGCTTTGCTCAGAATCAGTGGGGAAATACTAATGTTTGCACCACTACAG
CTGACCCACAAAACAACCAACACTCACAGAGTAATCAACAAAGCAATTTT
AACAGCATTCAAAGTACTTTCACTCCAGAACAAATGAAAAGACTTCTCGA
AATGTTAGACAGCACAGAAAAGTCCTCACACAGTGTCAGTCAAATTCACA
AAGATATCATAGAGGATANACAAGGTATGTTTTCCTGGATAATGGACACA
GGAGCTACAGATCATGTTACCCATGATAAAAATTCATTCACAACATTTTA
TAAAATCAAACCTATATCTGTTAGATTACCAAACAAATCCACTGTCACAG
CCCATTATGCTGGAACAGTGCAGTTTTCTCCAAATTTTACTATTTTCAAT
GTTTTATACATACCAGATTTCACTTTTAATCTAATATCTGTCCAATCCTT
GACTAAAGACACAAATTGCATACTAACTTTCTCTTCTGAGTTATGTAAAA
TACAGGACAGAACCACATTGAGGATGATTGGATGTGTTAAAGTATATAAT
GGGCTCTACTACTTACAAAATGCTGCAAAGGAACCTAACTCTTATGCAGA
GGCCAGAGGAAGTCTTGAATGGGTTGATGCTATGAACAAAGAAATTAAAG
CCTTGGAGTACAATGGAACCTGGTTCTTGACTAAATTACCTCCTGGTAAG
AAAGCTATAGGCTGTAAGTGGGTTTACAAGATCAAACATAGAGCTGATGG
GACTGTGGAGAGGTATAAATCTCGGTTAGTTGCAAAAGGATATACCCAAC
AGAGGGTATAG

protein sequence of rna-XM_014656228.1_VrVC1973A-SNU_v1

>rna-XM_014656228.1_VrVC1973A-SNU_v1 ID=rna-XM_014656228.1_VrVC1973A-SNU_v1; Name=rna-XM_014656228.1_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=586bp
MANTEQTNNPSSPYYLHPGENPGISLISQILDESNYTSWSRSMRRALLSK
NKLKFINGEIKKPKREDALYDAWERNNMMVLSWIIKTLSVHIAESVVYVE
DAQELWEELKERFSKGDHFKFSDLLQEIHSIKQGERTVNQYFTYLKILWE
ELEFLRPIPSCSYKIPYSCDLSKAGHKYREMEHVICFLKGLNDCYNTVRT
QILLMEPLPNINRVFSLIIQQERQERQEKHESGHTSQTEIKVLASNTDKQ
SNWKNDQNWKGYGRGFSGRGQGRGRGRNPNQGKQCSYCHKMNHTIEECYS
KHGYPPWYKKGDNSGQNSFAQNQWGNTNVCTTTADPQNNQHSQSNQQSNF
NSIQSTFTPEQMKRLLEMLDSTEKSSHSVSQIHKDIIEDXQGMFSWIMDT
GATDHVTHDKNSFTTFYKIKPISVRLPNKSTVTAHYAGTVQFSPNFTIFN
VLYIPDFTFNLISVQSLTKDTNCILTFSSELCKIQDRTTLRMIGCVKVYN
GLYYLQNAAKEPNSYAEARGSLEWVDAMNKEIKALEYNGTWFLTKLPPGK
KAIGCKWVYKIKHRADGTVERYKSRLVAKGYTQQRV

mRNA from alignment at chr08:25639643..25641403+

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>rna-XM_014656228.1_VrVC1973A-SNU_v1 ID=rna-XM_014656228.1_VrVC1973A-SNU_v1; Name=rna-XM_014656228.1; organism=Vigna radiata; type=mRNA; length=1761bp; location=Sequence derived from: chr08:25639643..25641403+ (Vigna radiata
ATGGCCAATACGGAACAAACCAACAATCCTTCCAGCCCCTATTATCTTCA
CCCGGGAGAAAACCCAGGTATTTCACTTATTTCACAGATTCTTGATGAAT
CAAATTATACTTCTTGGAGCAGAAGTATGAGAAGGGCGCTATTATCCAAA
AACAAGCTGAAGTTTATAAATGGAGAGATCAAGAAACCGAAAAGAGAGGA
TGCTCTTTATGATGCTTGGGAAAGGAATAATATGATGGTATTGTCTTGGA
TTATCAAGACTCTCTCGGTTCACATAGCTGAAAGTGTTGTCTATGTTGAA
GATGCTCAAGAACTATGGGAGGAGTTAAAAGAGAGGTTCTCAAAGGGAga
ccatttcaaattttcagATTTGCTGCAAGAAATTCACTCCATCAAGCAAG
GGGAGAGAACTGTGAATCAGTATTTCACATATTTGAAAATACTGTGGGAA
GAACTCGAATTTTTGAGACCCATTCCTAGTTGTAGCTACAAGATTCCTTA
TAGCTGTGATCTTTCAAAAGCTGGGCACAAATATAGGGAGATGGAACATG
TTATATGTTTCTTGAAAGGCCTAAATGATTGCTATAATACTGTTAGAACG
CAGATTTTGCTAATGGAACCCCTACCCAACATTAATCGGGTCTTCTCCCT
CATCATACAACAAGAGAGGCAAGAAAGGCAAGAAAAACATGAATCTGGAC
ACACTAGCCAGACTGAAATTAAGGTGCTTGCCAGCAACACTGACAAACAA
AGTAATTGGAAGAATGATCAAAACTGGAAGGGCTATGGACGTGGTTTTTC
TGGTCGTGGACAAGGAAGGGGCAGAGGAAGAAATCCTAACCAAGGAAAGC
AATGTTCCTATTGCCATAAAATGAATCATACCATTGAGGAATGTTATTCT
AAACATGGATATCCTCCATGGTACAAGAAAGGTGATAATAGCGGACAGAA
CAGCTTTGCTCAGAATCAGTGGGGAAATACTAATGTTTGCACCACTACAG
CTGACCCACAAAACAACCAACACTCACAGAGTAATCAACAAAGCAATTTT
AACAGCATTCAAAGTACTTTCACTCCAGAACAAATGAAAAGACTTCTCGA
AATGTTAGACAGCACAGAAAAGTCCTCACACAGTGTCAGTCAAATTCACA
AAGATATCATAGAGGATANACAAGGTATGTTTTCCTGGATAATGGACACA
GGAGCTACAGATCATGTTACCCATGATAAAAATTCATTCacaacatttta
taaaatcaaacctaTATCTGTTAGATTACCAAACAAATCCACTGTCACAG
CCCATTATGCTGGAACAGTGCAGTTTTCTccaaattttactattttcaat
gttttatacATACCAGATTTCACTTTTAATCTAATATCTGTCCAATCCTT
GACTAAAGACACAAATTGCATACTAACTTTCTCTTCTGAGTTATGTAAAA
TACAGGACAGAACCACATTGAGGATGATTGGATGTGTTAAAGTATATAAT
GGGCTCTACTACTTACAAAATGCTGCAAAGGAACCTAACTCTTATGCAGA
GGCCAGAGGAAGTCTTGAATGGGTTGATGCTATGAACAAAGAAATTAAAG
CCTTGGAGTACAATGGAACCTGGTTCTTGACTAAATTACCTCCTGGTAAG
AAAGCTATAGGCTGTAAGTGGGTTTACAAGATCAAACATAGAGCTGATGG
GACTGTGGAGAGGTATAAATCTCGGTTAGTTgcaaaaggatatacccaaC
AGAGGGTATAG

Coding sequence (CDS) from alignment at chr08:25639643..25641403+

>rna-XM_014656228.1_VrVC1973A-SNU_v1 ID=rna-XM_014656228.1_VrVC1973A-SNU_v1; Name=rna-XM_014656228.1; organism=Vigna radiata; type=CDS; length=1761bp; location=Sequence derived from: chr08:25639643..25641403+ (Vigna radiata
ATGGCCAATACGGAACAAACCAACAATCCTTCCAGCCCCTATTATCTTCA
CCCGGGAGAAAACCCAGGTATTTCACTTATTTCACAGATTCTTGATGAAT
CAAATTATACTTCTTGGAGCAGAAGTATGAGAAGGGCGCTATTATCCAAA
AACAAGCTGAAGTTTATAAATGGAGAGATCAAGAAACCGAAAAGAGAGGA
TGCTCTTTATGATGCTTGGGAAAGGAATAATATGATGGTATTGTCTTGGA
TTATCAAGACTCTCTCGGTTCACATAGCTGAAAGTGTTGTCTATGTTGAA
GATGCTCAAGAACTATGGGAGGAGTTAAAAGAGAGGTTCTCAAAGGGAga
ccatttcaaattttcagATTTGCTGCAAGAAATTCACTCCATCAAGCAAG
GGGAGAGAACTGTGAATCAGTATTTCACATATTTGAAAATACTGTGGGAA
GAACTCGAATTTTTGAGACCCATTCCTAGTTGTAGCTACAAGATTCCTTA
TAGCTGTGATCTTTCAAAAGCTGGGCACAAATATAGGGAGATGGAACATG
TTATATGTTTCTTGAAAGGCCTAAATGATTGCTATAATACTGTTAGAACG
CAGATTTTGCTAATGGAACCCCTACCCAACATTAATCGGGTCTTCTCCCT
CATCATACAACAAGAGAGGCAAGAAAGGCAAGAAAAACATGAATCTGGAC
ACACTAGCCAGACTGAAATTAAGGTGCTTGCCAGCAACACTGACAAACAA
AGTAATTGGAAGAATGATCAAAACTGGAAGGGCTATGGACGTGGTTTTTC
TGGTCGTGGACAAGGAAGGGGCAGAGGAAGAAATCCTAACCAAGGAAAGC
AATGTTCCTATTGCCATAAAATGAATCATACCATTGAGGAATGTTATTCT
AAACATGGATATCCTCCATGGTACAAGAAAGGTGATAATAGCGGACAGAA
CAGCTTTGCTCAGAATCAGTGGGGAAATACTAATGTTTGCACCACTACAG
CTGACCCACAAAACAACCAACACTCACAGAGTAATCAACAAAGCAATTTT
AACAGCATTCAAAGTACTTTCACTCCAGAACAAATGAAAAGACTTCTCGA
AATGTTAGACAGCACAGAAAAGTCCTCACACAGTGTCAGTCAAATTCACA
AAGATATCATAGAGGATANACAAGGTATGTTTTCCTGGATAATGGACACA
GGAGCTACAGATCATGTTACCCATGATAAAAATTCATTCacaacatttta
taaaatcaaacctaTATCTGTTAGATTACCAAACAAATCCACTGTCACAG
CCCATTATGCTGGAACAGTGCAGTTTTCTccaaattttactattttcaat
gttttatacATACCAGATTTCACTTTTAATCTAATATCTGTCCAATCCTT
GACTAAAGACACAAATTGCATACTAACTTTCTCTTCTGAGTTATGTAAAA
TACAGGACAGAACCACATTGAGGATGATTGGATGTGTTAAAGTATATAAT
GGGCTCTACTACTTACAAAATGCTGCAAAGGAACCTAACTCTTATGCAGA
GGCCAGAGGAAGTCTTGAATGGGTTGATGCTATGAACAAAGAAATTAAAG
CCTTGGAGTACAATGGAACCTGGTTCTTGACTAAATTACCTCCTGGTAAG
AAAGCTATAGGCTGTAAGTGGGTTTACAAGATCAAACATAGAGCTGATGG
GACTGTGGAGAGGTATAAATCTCGGTTAGTTgcaaaaggatatacccaaC
AGAGGGTATAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR029472	Copia-like_N
IPR013103	RVT_2

Search form

rna-XM_014656228.1