rna-XM_014656927.2

Transcript Overview
Namerna-XM_014656927.2
Unique Namerna-XM_014656927.2_VrVC1973A-SNU_v1
TypemRNA
OrganismVigna radiata (Mung bean, green gram)
Sequence length291
Productuncharacterized LOC106771043, transcript variant X4
References
External references for this mRNA
DatabaseAccession
GeneID106771043
GenbankXM_014656927.2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr08chromosomechr08:30923755..30927480 -Vigna radiata cv. VC1973A genome v6.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
anvrvL0435Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0619Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0668Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0794Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0797Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL1108Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caivrvL292Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivrvL391Cicer arietinum ICC 4958 genome v2Cicer arietinum
ccvrvL0819Cajanus cajan Asha genome v1.0Cajanus cajan
psvrvL227Pisum sativum Cameor genome v1aPisum sativum
pvvrvL065Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvrvL069Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvrvL539Pisum sativum Cameor genome v1aPisum sativum
pvvrvL570Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvrvL389Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL410Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL612Vicia faba cv. Tiffany genome v1.0Vicia faba
vrvvrvL144Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvL402Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvrvL616Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvssR773Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR802Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR826Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR831Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvzwsR626Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvzwsR656Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuaR545Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvzwsR704Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuR588Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuaR577Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvvuR638Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvrvL216Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvrvL224Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvrvL314Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvrvL352Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
carvrvL222Cicer arietinum
carvrvL228Cicer arietinum
carvrvL312Cicer arietinum
ccavrvL251Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL261Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL365Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL383Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vrvvumR621Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR682Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvvaR743Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR797Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR804Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvstR656Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR674Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvrvL394Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL584Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL603Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvrvL056Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL063Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL530Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vrvvunR548Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vrvvunR599Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC106771043gene-LOC106771043_VrVC1973A-SNU_v1Vigna radiatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_014656927.2-3exon-XM_014656927.2-3_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014656927.2-2exon-XM_014656927.2-2_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014656927.2-1exon-XM_014656927.2-1_VrVC1973A-SNU_v1Vigna radiataexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_014512413.1cds-XP_014512413.1_VrVC1973A-SNU_v1_2Vigna radiataCDS
cds-XP_014512413.1cds-XP_014512413.1_VrVC1973A-SNU_v1Vigna radiataCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_014656927.2_VrVC1973A-SNU_v1rna-XM_014656927.2_VrVC1973A-SNU_v1Vigna radiatapolypeptide
rna-XM_014656927.2_VrVC1973A-SNU_v1rna-XM_014656927.2_VrVC1973A-SNU_v1-proteinVigna radiatapolypeptide


Homology
[Close]
BLAST of rna-XM_014656927.2 vs. Araport11
Match: AT1G57540.3 (| 40S ribosomal protein | Chr1:21310478-21311215 REVERSE LENGTH=103 | 201606)

HSP 1 Score: 169.088 bits (427), Expect = 4.460e-56
Identity = 76/96 (79.17%), Postives = 90/96 (93.75%), Query Frame = 0 
Query:    1 MSLRRFLGFSDGEVMRSDAKPCSRLMRHTAGIYSVGGALGFWILCRLHYGPRITNPRSLRWAACGAVTVSSSTALLVRLFSPECEPQNIAAYDNKK 96
            M+LR+ LG+S+G++MRSDAKPCSRLM+ TA I++VGGALGFW+LCRLHYGPRIT PRSLRWA CGA++VS+STA+LVRLFSPECEPQNIAAYDN K
Sbjct:    1 MALRQKLGWSEGDLMRSDAKPCSRLMKQTAAIFTVGGALGFWVLCRLHYGPRITVPRSLRWAGCGALSVSTSTAMLVRLFSPECEPQNIAAYDNIK 96
[Close]
BLAST of rna-XM_014656927.2 vs. Araport11
Match: AT1G57540.2 (| 40S ribosomal protein | Chr1:21310478-21311215 REVERSE LENGTH=103 | 201606)

HSP 1 Score: 169.088 bits (427), Expect = 4.460e-56
Identity = 76/96 (79.17%), Postives = 90/96 (93.75%), Query Frame = 0 
Query:    1 MSLRRFLGFSDGEVMRSDAKPCSRLMRHTAGIYSVGGALGFWILCRLHYGPRITNPRSLRWAACGAVTVSSSTALLVRLFSPECEPQNIAAYDNKK 96
            M+LR+ LG+S+G++MRSDAKPCSRLM+ TA I++VGGALGFW+LCRLHYGPRIT PRSLRWA CGA++VS+STA+LVRLFSPECEPQNIAAYDN K
Sbjct:    1 MALRQKLGWSEGDLMRSDAKPCSRLMKQTAAIFTVGGALGFWVLCRLHYGPRITVPRSLRWAGCGALSVSTSTAMLVRLFSPECEPQNIAAYDNIK 96
[Close]
BLAST of rna-XM_014656927.2 vs. Araport11
Match: AT1G57540.1 (| 40S ribosomal protein | Chr1:21310478-21311215 REVERSE LENGTH=103 | 201606)

HSP 1 Score: 169.088 bits (427), Expect = 4.460e-56
Identity = 76/96 (79.17%), Postives = 90/96 (93.75%), Query Frame = 0 
Query:    1 MSLRRFLGFSDGEVMRSDAKPCSRLMRHTAGIYSVGGALGFWILCRLHYGPRITNPRSLRWAACGAVTVSSSTALLVRLFSPECEPQNIAAYDNKK 96
            M+LR+ LG+S+G++MRSDAKPCSRLM+ TA I++VGGALGFW+LCRLHYGPRIT PRSLRWA CGA++VS+STA+LVRLFSPECEPQNIAAYDN K
Sbjct:    1 MALRQKLGWSEGDLMRSDAKPCSRLMKQTAAIFTVGGALGFWVLCRLHYGPRITVPRSLRWAGCGALSVSTSTAMLVRLFSPECEPQNIAAYDNIK 96
[Close]
BLAST of rna-XM_014656927.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SQQ5|A0A0S3SQQ5_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G184600 PE=4 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 3.614e-65
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0 
Query:    1 MSLRRFLGFSDGEVMRSDAKPCSRLMRHTAGIYSVGGALGFWILCRLHYGPRITNPRSLRWAACGAVTVSSSTALLVRLFSPECEPQNIAAYDNKK 96
            MSLRRFLGFSDGEVMRSDAKPCSRLMRHTAGIYSVGGALGFWILCRLHYGPRITNPRSLRWAACGAVTVSSSTALLVRLFSPECEPQNIAAYDNKK
Sbjct:    1 MSLRRFLGFSDGEVMRSDAKPCSRLMRHTAGIYSVGGALGFWILCRLHYGPRITNPRSLRWAACGAVTVSSSTALLVRLFSPECEPQNIAAYDNKK 96
[Close]
BLAST of rna-XM_014656927.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3V2K5|A0A1S3V2K5_VIGRR (uncharacterized protein LOC106771043 OS=Vigna radiata var. radiata OX=3916 GN=LOC106771043 PE=4 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 3.614e-65
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0 
Query:    1 MSLRRFLGFSDGEVMRSDAKPCSRLMRHTAGIYSVGGALGFWILCRLHYGPRITNPRSLRWAACGAVTVSSSTALLVRLFSPECEPQNIAAYDNKK 96
            MSLRRFLGFSDGEVMRSDAKPCSRLMRHTAGIYSVGGALGFWILCRLHYGPRITNPRSLRWAACGAVTVSSSTALLVRLFSPECEPQNIAAYDNKK
Sbjct:    1 MSLRRFLGFSDGEVMRSDAKPCSRLMRHTAGIYSVGGALGFWILCRLHYGPRITNPRSLRWAACGAVTVSSSTALLVRLFSPECEPQNIAAYDNKK 96
[Close]
BLAST of rna-XM_014656927.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3V325|A0A1S3V325_VIGRR (uncharacterized protein LOC106771310 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106771310 PE=4 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.737e-65
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0 
Query:    1 MSLRRFLGFSDGEVMRSDAKPCSRLMRHTAGIYSVGGALGFWILCRLHYGPRITNPRSLRWAACGAVTVSSSTALLVRLFSPECEPQNIAAYDNKK 96
            MSLRRFLGFSDGEVMRSDAKPCSRLMRHTAGIYSVGGALGFWILCRLHYGPRITNPRSLRWAACGAVTVSSSTALLVRLFSPECEPQNIAAYDNKK
Sbjct:   21 MSLRRFLGFSDGEVMRSDAKPCSRLMRHTAGIYSVGGALGFWILCRLHYGPRITNPRSLRWAACGAVTVSSSTALLVRLFSPECEPQNIAAYDNKK 116
[Close]
BLAST of rna-XM_014656927.2 vs. UniProtKB/TrEMBL
Match: tr|V7BKE2|V7BKE2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G205000g PE=4 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.321e-64
Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0 
Query:    1 MSLRRFLGFSDGEVMRSDAKPCSRLMRHTAGIYSVGGALGFWILCRLHYGPRITNPRSLRWAACGAVTVSSSTALLVRLFSPECEPQNIAAYDNKK 96
            MSLRRF GFSDGEVMRSDAKPCSRLMRHTAGIYSVGGALGFWILCRLHYGPRITNPRSLRWAACGAVTVSSSTALLVRLFSPECEPQNIAAYDNKK
Sbjct:    1 MSLRRFFGFSDGEVMRSDAKPCSRLMRHTAGIYSVGGALGFWILCRLHYGPRITNPRSLRWAACGAVTVSSSTALLVRLFSPECEPQNIAAYDNKK 96
[Close]
BLAST of rna-XM_014656927.2 vs. UniProtKB/TrEMBL
Match: tr|A0A371DZH5|A0A371DZH5_MUCPR (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_62771 PE=4 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 2.099e-62
Identity = 90/96 (93.75%), Postives = 94/96 (97.92%), Query Frame = 0 
Query:    1 MSLRRFLGFSDGEVMRSDAKPCSRLMRHTAGIYSVGGALGFWILCRLHYGPRITNPRSLRWAACGAVTVSSSTALLVRLFSPECEPQNIAAYDNKK 96
            MSLRRFLG+SDGEVMRSDAKPCSRLMRHTA I+SVGGALGFW+LCR+HYGPRITNPRS RWAACGAVTVSSSTALLVRLFSPECEPQNIAAYDNKK
Sbjct:   24 MSLRRFLGYSDGEVMRSDAKPCSRLMRHTAAIFSVGGALGFWVLCRMHYGPRITNPRSFRWAACGAVTVSSSTALLVRLFSPECEPQNIAAYDNKK 119
[Close]
BLAST of rna-XM_014656927.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XY99|A0A1S2XY99_CICAR (uncharacterized protein LOC101500096 OS=Cicer arietinum OX=3827 GN=LOC101500096 PE=4 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 2.714e-62
Identity = 91/96 (94.79%), Postives = 95/96 (98.96%), Query Frame = 0 
Query:    1 MSLRRFLGFSDGEVMRSDAKPCSRLMRHTAGIYSVGGALGFWILCRLHYGPRITNPRSLRWAACGAVTVSSSTALLVRLFSPECEPQNIAAYDNKK 96
            MSLRRFLG+SDGEVMRSDAKPCSRLMRHTAGI+SVGGALGFW+LCR+HYGPRIT PRSLRWAACGAVTVSSSTALLVRLFSPECEPQNIAAYDNKK
Sbjct:    1 MSLRRFLGYSDGEVMRSDAKPCSRLMRHTAGIFSVGGALGFWVLCRMHYGPRITIPRSLRWAACGAVTVSSSTALLVRLFSPECEPQNIAAYDNKK 96
[Close]
BLAST of rna-XM_014656927.2 vs. UniProtKB/TrEMBL
Match: tr|A0A6P4C1B6|A0A6P4C1B6_ARADU (uncharacterized protein LOC107465128 OS=Arachis duranensis OX=130453 GN=LOC107465128 PE=4 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 4.352e-62
Identity = 91/96 (94.79%), Postives = 94/96 (97.92%), Query Frame = 0 
Query:    1 MSLRRFLGFSDGEVMRSDAKPCSRLMRHTAGIYSVGGALGFWILCRLHYGPRITNPRSLRWAACGAVTVSSSTALLVRLFSPECEPQNIAAYDNKK 96
            MSLRRFLGFSDGE+MRSDAKPCSRLMRHTAGIYSVGGALGFW+LCRLHYGPRIT PRSLRWAACGAVT S+STALLVRLFSPECEPQNIAAYDNKK
Sbjct:    1 MSLRRFLGFSDGELMRSDAKPCSRLMRHTAGIYSVGGALGFWVLCRLHYGPRITIPRSLRWAACGAVTTSASTALLVRLFSPECEPQNIAAYDNKK 96
[Close]
BLAST of rna-XM_014656927.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445BLC7|A0A445BLC7_ARAHY (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A09g045023 PE=4 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 4.352e-62
Identity = 91/96 (94.79%), Postives = 94/96 (97.92%), Query Frame = 0 
Query:    1 MSLRRFLGFSDGEVMRSDAKPCSRLMRHTAGIYSVGGALGFWILCRLHYGPRITNPRSLRWAACGAVTVSSSTALLVRLFSPECEPQNIAAYDNKK 96
            MSLRRFLGFSDGE+MRSDAKPCSRLMRHTAGIYSVGGALGFW+LCRLHYGPRIT PRSLRWAACGAVT S+STALLVRLFSPECEPQNIAAYDNKK
Sbjct:    1 MSLRRFLGFSDGELMRSDAKPCSRLMRHTAGIYSVGGALGFWVLCRLHYGPRITIPRSLRWAACGAVTTSASTALLVRLFSPECEPQNIAAYDNKK 96
[Close]
BLAST of rna-XM_014656927.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445ABD2|A0A445ABD2_ARAHY (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A02g010063 PE=4 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 1.538e-61
Identity = 90/96 (93.75%), Postives = 94/96 (97.92%), Query Frame = 0 
Query:    1 MSLRRFLGFSDGEVMRSDAKPCSRLMRHTAGIYSVGGALGFWILCRLHYGPRITNPRSLRWAACGAVTVSSSTALLVRLFSPECEPQNIAAYDNKK 96
            MSLRRFLGFSDGE+MRSDAKPCSRLMRHTAGI+SVGGALGFW+LCRLHYGPRIT PRSLRWAACGAVT S+STALLVRLFSPECEPQNIAAYDNKK
Sbjct:    1 MSLRRFLGFSDGELMRSDAKPCSRLMRHTAGIFSVGGALGFWVLCRLHYGPRITIPRSLRWAACGAVTTSASTALLVRLFSPECEPQNIAAYDNKK 96
[Close]
BLAST of rna-XM_014656927.2 vs. UniProtKB/TrEMBL
Match: tr|A0A6P4C093|A0A6P4C093_ARADU (uncharacterized protein LOC107472368 OS=Arachis duranensis OX=130453 GN=LOC107472368 PE=4 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 1.538e-61
Identity = 90/96 (93.75%), Postives = 94/96 (97.92%), Query Frame = 0 
Query:    1 MSLRRFLGFSDGEVMRSDAKPCSRLMRHTAGIYSVGGALGFWILCRLHYGPRITNPRSLRWAACGAVTVSSSTALLVRLFSPECEPQNIAAYDNKK 96
            MSLRRFLGFSDGE+MRSDAKPCSRLMRHTAGI+SVGGALGFW+LCRLHYGPRIT PRSLRWAACGAVT S+STALLVRLFSPECEPQNIAAYDNKK
Sbjct:    1 MSLRRFLGFSDGELMRSDAKPCSRLMRHTAGIFSVGGALGFWVLCRLHYGPRITIPRSLRWAACGAVTTSASTALLVRLFSPECEPQNIAAYDNKK 96
The following BLAST results are available for this feature:
BLAST of rna-XM_014656927.2 vs.
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of rna-XM_014656927.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 3
Match NameE-valueIdentityDescription
AT1G57540.34.460e-5679.17| 40S ribosomal protein | Chr1:21310478-21311215 R... [more]
AT1G57540.24.460e-5679.17| 40S ribosomal protein | Chr1:21310478-21311215 R... [more]
AT1G57540.14.460e-5679.17| 40S ribosomal protein | Chr1:21310478-21311215 R... [more]
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BLAST of rna-XM_014656927.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A0S3SQQ5|A0A0S3SQQ5_PHAAN3.614e-65100.00Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A1S3V2K5|A0A1S3V2K5_VIGRR3.614e-65100.00uncharacterized protein LOC106771043 OS=Vigna radi... [more]
tr|A0A1S3V325|A0A1S3V325_VIGRR3.737e-65100.00uncharacterized protein LOC106771310 isoform X1 OS... [more]
tr|V7BKE2|V7BKE2_PHAVU1.321e-6498.96Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|A0A371DZH5|A0A371DZH5_MUCPR2.099e-6293.75Uncharacterized protein (Fragment) OS=Mucuna pruri... [more]
tr|A0A1S2XY99|A0A1S2XY99_CICAR2.714e-6294.79uncharacterized protein LOC101500096 OS=Cicer arie... [more]
tr|A0A6P4C1B6|A0A6P4C1B6_ARADU4.352e-6294.79uncharacterized protein LOC107465128 OS=Arachis du... [more]
tr|A0A445BLC7|A0A445BLC7_ARAHY4.352e-6294.79Uncharacterized protein OS=Arachis hypogaea OX=381... [more]
tr|A0A445ABD2|A0A445ABD2_ARAHY1.538e-6193.75Uncharacterized protein OS=Arachis hypogaea OX=381... [more]
tr|A0A6P4C093|A0A6P4C093_ARADU1.538e-6193.75uncharacterized protein LOC107472368 OS=Arachis du... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR3633140S RIBOSOMAL PROTEINcoord: 1..96

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_014656927.2_VrVC1973A-SNU_v1 ID=rna-XM_014656927.2_VrVC1973A-SNU_v1; Name=rna-XM_014656927.2; organism=Vigna radiata; type=mRNA; length=291bp
ATGTCGCTGAGGCGTTTCTTAGGCTTTTCTGATGGTGAGGTTATGAGGTC
TGATGCAAAACCTTGTTCTCGGCTAATGAGGCACACGGCTGGAATCTATA
GTGTTGGGGGCGCATTAGGATTTTGGATCCTTTGTCGACTGCATTATGGT
CCTCGAATTACAAATCCTAGGAGCCTTCGTTGGGCAGCATGTGGAGCTGT
AACTGTAAGCTCAAGCACAGCTTTACTGGTTCGTTTATTTAGTCCTGAAT
GTGAGCCCCAGAATATAGCTGCTTACGACAATAAAAAGTAA
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protein sequence of rna-XM_014656927.2_VrVC1973A-SNU_v1

>rna-XM_014656927.2_VrVC1973A-SNU_v1 ID=rna-XM_014656927.2_VrVC1973A-SNU_v1; Name=rna-XM_014656927.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=96bp
MSLRRFLGFSDGEVMRSDAKPCSRLMRHTAGIYSVGGALGFWILCRLHYG
PRITNPRSLRWAACGAVTVSSSTALLVRLFSPECEPQNIAAYDNKK
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mRNA from alignment at chr08:30923755..30927480-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_014656927.2_VrVC1973A-SNU_v1 ID=rna-XM_014656927.2_VrVC1973A-SNU_v1; Name=rna-XM_014656927.2; organism=Vigna radiata; type=mRNA; length=3726bp; location=Sequence derived from: chr08:30923755..30927480- (Vigna radiata
CAAACGCATATCGGAGAAGGAAGAAACAAGAAGCTTGAGCGCGGTGGGAA
CGACGTCGTTAAGCTTCCAAATGAGTTGCCATATCTCTCATCGATGACAA
ACACGTGATCTTCTTCTTCAACCCTTTTGCTAACACAAAAAATGAGGGGA
CAGTGGAATAAAAGAAAAAGGGTGATTGGTGCGTTAGTATAAAAGGTAGT
TTAAATAGTAGCTTCCTAAAAAGACTTATCAAGTTAGAACAGGTCTAAAG
AAAATGGGCCTATACATCTGTATCTGATTTTGAACTCAAACCCTCCCATC
AAAATAGAGGGAATAAAGATAGGGTTTATGGCTTTCAGTGAGATATCATC
TGAGACTGCTGCTTCACTCTCCACTTTCACATCCAGATCTTATTCCTCCT
CGTAATCAAGGTATGCTGCTTTTGCTTCTACTCTTGGTTTCTTCCAGATA
TCTGCTTCTTTTGTCTGAATATGTTCTACCGTGTGTATTTCTGCAATTGA
TTCTGGACATTCTTCTTTCTTTGATGAGGATCTGATTCAGTTCAAATGAT
CGTTTTTCTAGCCATCTGTGTGTCTCATCATTTCTATTTGTTTTGCACTT
GATTTCCCAAATAAAACCTTGCTCCTTCATCTGCTTCCAATACCGGGCTT
CTTTGACCCTGAAATATATGCCTCTTTATTAGAAATATGCTATCGCTTGC
AAGCCATTCGTCGCGGTATCAAACTCCATCACGTTATCCCAACATCTATG
TTGCATAGGAATTTTGGCATCTCTTCCAAGCTTCTTAGGTTGTATGCGGT
GTGTGGATATGTGGACGATGCCCACGAGCTGTTTGATCAAATGTCTAATA
GGGACACGTCTGCATTTCCCTGGAATTCGCTCATCTCAGGGTATTCCCAA
ATGGGCCTCTATGACGACGCCATTGCACTCTACTTCCAAATGGTAGAAGA
GGGTGTTGAACCTGACTTTCAAACGTTCATGATGATCATAGTTTCATCTA
TGAGCATGTTCATTATTCTTGTTTCCTTCTCTTCATTTTATTAGATGAAA
AAAATACATACACACAGAACCTAAGATGTCAATTAAAAGTTGATTAGTAA
TTGTTACCAACGGGTATGCTTCTGTTTTCTGTTTTCTGTTCTAAAGAAAA
TTTAGAACTGTTCTATGGGTTTATTGCCTACTATTGATACCATTTATAAA
CCAACAGATTTTTCTTTTTATTTATATTTCACATTTAATTCATAAACATC
GACCTCTTTATGTTTAAATGAAAAATAAACAGTGGATTTTTTTAATTCTG
TCTCGTTCAAATAAAAAGTTGGGAGGAAGAAAATAAAGATAACATATCCA
AATAATCTTTCAAATATAAAGTTGTTAACAGCATGTAAAATCTCGTATAT
GAAAGTTCGACTTGGTTCACATTCAAGTTATGTAACTACTGTTGTTTTTA
TGTTTTCCTTTATGCTACCTGAAGATCAAAATAAAAGGCATGTTTGAAAA
GTTTTTTATTGGGACTTTAAAGAAAAATAAAGACAATTTTTTTAATGAGT
TAAGATTATTTTATATACACATTGAAAAGTAAAAATTTATATAAGTCACT
GAAGAACTTTTTCAAATTAATTTGAATGTATGTATGTTAAAATATAATGT
GTATATATCTGGTGCATGTGTGCGTGAACTAGAACATGGTTTTTCATGCT
TTATTTTAGAGTTAGAAAACAGTTCAAAAAACAAGTATTTAATGGGCTAA
AGGGTGGGCTATCTCTTAACTAACCCCGGCCCATTTCAGTCNGNCCCAGT
AGCTCTTCAAGGCACAATTCGCATAGAGGCGCCTTCTTCCTTGCAGTGAT
TAGGCAGCAAAGTGACCTTCTCTCTGACTTCGGTGGCTTTGTATTTTGAG
GTAATTTTCTTTATCAGTTTGAACTGAAGCTTTAATTCAACTTCACCTTC
GTCAATGCCATAATGTAACATGTTCTTGCAATCCTGTTTCTGCTGAAATT
TTGGAATCTGGTTTTGTCTTTGGTTTGATTAGTGTATGACCTTGCATTTT
GGGTGTTTGATAAAATGACCTCAAGGGAGTTCACACCACTTTGGTTGAGA
CATAATATATTGGTAGCTTCTACTCTCGGTTAAAGAATAATTAGTGTAGA
AAACTGGGAATCTCAATAATATAGAGGCTTCTCATATTGTTCTATTATTG
AGAAGTCTTCGTACTTTTCGTTTTTCTACTTTGTTTGGATAAAGGGTCTA
TAAAAGCATAATCGGTATGCAATTTACTGTCTTTTGGGGAATAACGTCCA
ATTCGACAAATTCTTCTATGACGCCTATAGGAGACACAAAAAATAAAAGG
TGAATTAATTGAGCTTCTTCTGTGATAACTGGTTTAGCTTATAAAAGAAA
CTAATTCGTTTTGCATTTTTCTTTTATTCTATAATTTTTTATGAAAGCAA
AAATAATCAAACAGGACATCAATTCTAATTCTTATAATGAGACAATACCT
CCAGGGTAGTCTGAAATTGGACTTTTGAATTTGACTCTTTAAAGAACACT
ATAAAGCTATTTCACAGGGAACATGAGACAAATTTCTCTTTTATAAATTC
TATCGGATAACATTTGTAACTAACTGGCCTCACCCTGCAAATGCTGCACT
ATCAATATGATCTGCTACAGCTAAAGTTTCTGTTGCTGCATTATATTTGT
GTAATGAAGCTACTATTTGTTAATTTTTATGGTTGAAGTGCATAACATTG
TATAGCAAACTAGTCTCATATATTGGGTGGCTATTTTTTTAGTTTATTAC
TAAATTAAAAGTTATTACAGGCGAAATTCTAATAAAATAAAACTAGTTTT
CACATCCTTTAATATCAGTAGCATCAACTTTATAGTTTTCTGTGCTTACA
ACGAATATTTGTTTTATTCTATTTGATTTTCATTTTACATCAACCACTTT
TAAGTTTAATATTGACATTTTTCATGTGCCGTCTAACTGTTAAGAGTGAA
TTCTGCTTGCATTGCAATCACAAGCACGCTAATGCATAGTGACTTTGTGA
TATACTTACTGTTATATTGAAGTTGGAGGTATTCTATCAGACATCTTTCT
TATCACAATTGTCTAGTATGTTGAGTATTAACTCTTAACTACCCGGGGTT
GTCTTTCTGTAGGTAACTAACACAATGTCGCTGAGGCGTTTCTTAGGCTT
TTCTGATGGTGAGGTTATGAGGTCTGATGCAAAACCTTGTTCTCGGCTAA
TGAGGCACACGGCTGGAATCTATAGTGTTGGGGGCGCATTAGGATTTTGG
ATCCTTTGTCGACTGCATTATGGTTTGTTCTTCTACCTTTTAATCTTGCT
TCCTTCTTGTTCTAGCAGAACTTTGCAACTGAATTGCTCATAATATTGTT
TTCCTGTGGATGATGATTAAATTCTGAACAGTTTGAATTTTTTGTATCGC
TTGAATATCAAAAATTGTGACATTGTAACTCATCCTTCTAGACTCTCTCT
CAATCTTTGTTGGTCATGCAGGTCCTCGAATTACAAATCCTAGGAGCCTT
CGTTGGGCAGCATGTGGAGCTGTAACTGTAAGCTCAAGCACAGCTTTACT
GGTTCGTTTATTTAGTCCTGAATGTGAGCCCCAGAATATAGCTGCTTACG
ACAATAAAAAGTAACACTGATATTCCTTTTCACTCTTAGTTAATATAAGA
AATTGAAAATTATGGGTTTTTGAGAA
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Coding sequence (CDS) from alignment at chr08:30923755..30927480-

>rna-XM_014656927.2_VrVC1973A-SNU_v1 ID=rna-XM_014656927.2_VrVC1973A-SNU_v1; Name=rna-XM_014656927.2; organism=Vigna radiata; type=CDS; length=291bp; location=Sequence derived from: chr08:30923755..30927480- (Vigna radiata
ATGTCGCTGAGGCGTTTCTTAGGCTTTTCTGATGGTGAGGTTATGAGGTC
TGATGCAAAACCTTGTTCTCGGCTAATGAGGCACACGGCTGGAATCTATA
GTGTTGGGGGCGCATTAGGATTTTGGATCCTTTGTCGACTGCATTATGGT
CCTCGAATTACAAATCCTAGGAGCCTTCGTTGGGCAGCATGTGGAGCTGT
AACTGTAAGCTCAAGCACAGCTTTACTGGTTCGTTTATTTAGTCCTGAAT
GTGAGCCCCAGAATATAGCTGCTTACGACAATAAAAAGTAA
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