Psat4g005520.4

Transcript Overview
NamePsat4g005520.4
Unique NamePsat4g005520.4_Ps_Cameor_v1a
TypemRNA
OrganismPisum sativum (pea)
Sequence length6870
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr4LG4supercontigchr4LG4:5925247..5932116 +Pisum sativum Cameor genome v1an/a
chr4LG4supercontigchr4LG4:5925247..5932116 +Pisum sativum Cameor genome v1an/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan: P. sativum Cameor genome v1a2019-09-12
BLAST: P. sativum Cameor genome v1a vs. Swissprot2019-09-12
Pisum sativum Cameor genome v1a2019-09-06
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pspsL05Pisum sativum Cameor genome v1aPisum sativum
psvuR303Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuR308Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuR359Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pspvR348Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pspvR375Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpsL0207Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpsL0375Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpsL0488Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpsL0691Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
pszwsR306Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pstifR307Vicia faba cv. Tiffany genome v1.0Vicia faba
psvfhR299Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
psvrvR298Vigna radiata cv. VC1973A genome v6.0Vigna radiata
psvssR344Vicia sativa cv. Studenica genome v1.0Vicia sativa
psvuaR289Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
psvuaR313Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
psvssR430Vicia sativa cv. Studenica genome v1.0Vicia sativa
avjpsL137Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpsL244Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpsL255Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpsL045Cicer arietinum
carpsL619Cicer arietinum
psvumR287Vigna umbellata FF25 genome v1.0Vigna umbellata
psvumR398Vigna umbellata FF25 genome v1.0Vigna umbellata
psvvaR323Vicia villosa cv. AU Merit genome v1.0Vicia villosa
psvvaR329Vicia villosa cv. AU Merit genome v1.0Vicia villosa
psvvaR389Vicia villosa cv. AU Merit genome v1.0Vicia villosa
psvasR279Vigna angularis cv. Shumari genome v1.a1Vigna angularis
psvstR288Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
psvstR299Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
psvasR360Vigna angularis cv. Shumari genome v1.a1Vigna angularis
psvstR377Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
psvunR282Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
psvunR293Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pspvfR365Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pspvfR389Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Psat4g005520Psat4g005520_Ps_Cameor_v1aPisum sativumgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Psat4g005520.4Psat4g005520.4_Ps_Cameor_v1a-proteinPisum sativumpolypeptide
Psat4g005520.4_Ps_Cameor_v1aPsat4g005520.4_Ps_Cameor_v1aPisum sativumpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Psat4g005520.4.exon1Psat4g005520.4.exon1_Ps_Cameor_v1aPisum sativumexon
Psat4g005520.4.exon2Psat4g005520.4.exon2_Ps_Cameor_v1aPisum sativumexon
Psat4g005520.4.exon3Psat4g005520.4.exon3_Ps_Cameor_v1aPisum sativumexon
Psat4g005520.4.exon4Psat4g005520.4.exon4_Ps_Cameor_v1aPisum sativumexon
Psat4g005520.4.exon5Psat4g005520.4.exon5_Ps_Cameor_v1aPisum sativumexon
Psat4g005520.4.exon6Psat4g005520.4.exon6_Ps_Cameor_v1aPisum sativumexon
Psat4g005520.4.exon7Psat4g005520.4.exon7_Ps_Cameor_v1aPisum sativumexon
Psat4g005520.4.exon8Psat4g005520.4.exon8_Ps_Cameor_v1aPisum sativumexon
Psat4g005520.4.exon9Psat4g005520.4.exon9_Ps_Cameor_v1aPisum sativumexon
Psat4g005520.4.exon10Psat4g005520.4.exon10_Ps_Cameor_v1aPisum sativumexon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Psat4g005520.4.five_prime_utr1Psat4g005520.4.five_prime_utr1_Ps_Cameor_v1aPisum sativumfive_prime_UTR
Psat4g005520.4.five_prime_utr2Psat4g005520.4.five_prime_utr2_Ps_Cameor_v1aPisum sativumfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Psat4g005520.4.cds1Psat4g005520.4.cds1_Ps_Cameor_v1aPisum sativumCDS
Psat4g005520.4.cds2Psat4g005520.4.cds2_Ps_Cameor_v1aPisum sativumCDS
Psat4g005520.4.cds3Psat4g005520.4.cds3_Ps_Cameor_v1aPisum sativumCDS
Psat4g005520.4.cds4Psat4g005520.4.cds4_Ps_Cameor_v1aPisum sativumCDS
Psat4g005520.4.cds5Psat4g005520.4.cds5_Ps_Cameor_v1aPisum sativumCDS
Psat4g005520.4.cds6Psat4g005520.4.cds6_Ps_Cameor_v1aPisum sativumCDS
Psat4g005520.4.cds7Psat4g005520.4.cds7_Ps_Cameor_v1aPisum sativumCDS
Psat4g005520.4.cds8Psat4g005520.4.cds8_Ps_Cameor_v1aPisum sativumCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Psat4g005520.4.three_prime_utr1Psat4g005520.4.three_prime_utr1_Ps_Cameor_v1aPisum sativumthree_prime_UTR
Psat4g005520.4.three_prime_utr2Psat4g005520.4.three_prime_utr2_Ps_Cameor_v1aPisum sativumthree_prime_UTR


Homology
BLAST of Psat4g005520.4 vs. DB:Swiss
Match: CSC1_ARATH (Calcium permeable stress-gated cation channel 1 OS=Arabidopsis thaliana OX=3702 GN=CSC1 PE=2 SV=1)

HSP 1 Score: 747.273 bits (1928), Expect = 0.000e+0
Identity = 366/500 (73.20%), Postives = 431/500 (86.20%), Query Frame = 1
Query:    1 MASLKDIGVAAGINILSAFIFFVAFAILRLQPLNDRVYFPKWYLKGLRTDPVHGGAFVRKVVNLDWRSYIRFLNWMPAALRMPEPELIDHAGLDSVVYLRIYLLGLKIFVPIAFLAWAMLVPVNWTSTGLEIAG-VKNITSSDIDKLSISNVQRGSERFWSHIIAAYAFTFWTCYILMKEYGKVAAMRLQFLAAEKRRPDQFSVLVRNIPPDPDESVSELVEHFFLVNHSNTYLTHQVVYNANRLAKLVKKKSKMQNWLIYYQNKLDRT-SIRPEMKTGFLGCCGTKVDSIDHYTTEIDKLSKEIALERDKVTNDPKSTMPAAFVSFKSRWGAAVCAQTQQTRNPTLWLTEWAPEPRDVYWPNLAIPYVSLTVRRLIVAVAXXXXXXXXMIPIAIVQALASLDGIEKAAPWLKPLVSVPFIKSFIQGFLPGIALKLFLIFLPSILMMMSKFEGFGSISSLERRSASRFYLFSFVNIFLGNILTGTAFQQLDSFIHQPANQ 1494
            MA+L+DIGV+AGINILSAF+FF+ FA+LRLQP NDRVYF KWYLKGLR+ P  GGAF ++ VNLD+RSY++FLNWMP AL+MPEPELIDHAGLDSVVYLRIY LGLKIF PIA LAWA+LVPVNWT+  LE+A  ++N+TSSDIDKLS+SN+   S RFW+HI+ AYAFT WTCY+LMKEY  +A MRLQF+A+E RRPDQF+VLVRN+PPD DESVSELVEHFFLVNH + YLTHQVV NAN+LA LVKKK K+QNWL YYQ K  R  S R  +K GFLG  G KVD+I+HY  EIDK+SKEI+ ER++V NDPK+ MPAAFVSFK+RW AAVCAQTQQTRNPT WLTEWAPEPRDV+W NLAIPYVSLTVRRLI+ VAFFFLTFFF++PIA VQ+LA+++GI KAAP+LK +V   F+KS IQGFLPGIALKLFL FLPSILM+MSKFEGF SISSLERR+A R+Y+F+ VN+FL +++ G AF+QL+SF++Q ANQ
Sbjct:    1 MATLQDIGVSAGINILSAFVFFIIFAVLRLQPFNDRVYFSKWYLKGLRSSPARGGAFAQRFVNLDFRSYMKFLNWMPEALKMPEPELIDHAGLDSVVYLRIYWLGLKIFTPIAVLAWAVLVPVNWTNNTLEMAKQLRNVTSSDIDKLSVSNIPEYSMRFWTHIVMAYAFTIWTCYVLMKEYETIANMRLQFVASEARRPDQFTVLVRNVPPDADESVSELVEHFFLVNHPDHYLTHQVVCNANKLADLVKKKKKLQNWLDYYQLKYARNNSQRIMVKLGFLGLWGQKVDAIEHYIAEIDKISKEISKEREEVVNDPKAIMPAAFVSFKTRWAAAVCAQTQQTRNPTQWLTEWAPEPRDVFWSNLAIPYVSLTVRRLIMHVAFFFLTFFFIVPIAFVQSLATIEGIVKAAPFLKFIVDDKFMKSVIQGFLPGIALKLFLAFLPSILMIMSKFEGFTSISSLERRAAFRYYIFNLVNVFLASVIAGAAFEQLNSFLNQSANQ 500          
BLAST of Psat4g005520.4 vs. DB:Swiss
Match: CSCL7_ARATH (CSC1-like protein At1g11960 OS=Arabidopsis thaliana OX=3702 GN=At1g11960 PE=2 SV=1)

HSP 1 Score: 735.717 bits (1898), Expect = 0.000e+0
Identity = 355/499 (71.14%), Postives = 424/499 (84.97%), Query Frame = 1
Query:    1 MASLKDIGVAAGINILSAFIFFVAFAILRLQPLNDRVYFPKWYLKGLRTDPVHGGAFVRKVVNLDWRSYIRFLNWMPAALRMPEPELIDHAGLDSVVYLRIYLLGLKIFVPIAFLAWAMLVPVNWTSTGLEIAGVKNITSSDIDKLSISNVQRGSERFWSHIIAAYAFTFWTCYILMKEYGKVAAMRLQFLAAEKRRPDQFSVLVRNIPPDPDESVSELVEHFFLVNHSNTYLTHQVVYNANRLAKLVKKKSKMQNWLIYYQNKLDRT-SIRPEMKTGFLGCCGTKVDSIDHYTTEIDKLSKEIALERDKVTNDPKSTMPAAFVSFKSRWGAAVCAQTQQTRNPTLWLTEWAPEPRDVYWPNLAIPYVSLTVRRLIVAVAXXXXXXXXMIPIAIVQALASLDGIEKAAPWLKPLVSVPFIKSFIQGFLPGIALKLFLIFLPSILMMMSKFEGFGSISSLERRSASRFYLFSFVNIFLGNILTGTAFQQLDSFIHQPANQ 1494
            MA+L DIGVAA INIL+A IF +AFAILR+QP NDRVYFPKWYLKG+R+ P+H GA V K VN++  SY+RFLNWMPAAL+MPEPELIDHAGLDS VYLRIYL+GLKIFVPIA LAW++LVPVNWTS GL++A ++N+TSSDIDKLSISN++ GS+RFW+H++ AYAFTFWTCY+LMKEY KVAAMRL FL  E+RRPDQF+VLVRN+P DPDES+S+ VEHFFLVNH + YLTHQVVYNAN LA LV++K   QNWL YYQ K  R    +P +KTGFLG  G KVD+IDHY  EI+KL+++I  ER KV  D  S MPAAFVSFK+RWGAAV AQTQQ+ +PT WLTEWAPE R+V+W NLAIPYVSLTVRRLI+ +AFFFLTFFFMIPIA VQ+LAS++GIEK AP+LK ++     KS IQGFLPGI LKLFLIFLPSILM+MSKFEGF S+SSLERR+A R+Y+F+ +N+FLG+++TG+AF+QLDSF+ Q A +
Sbjct:    1 MATLGDIGVAAAINILTAIIFLLAFAILRIQPFNDRVYFPKWYLKGIRSSPLHSGALVSKFVNVNLGSYLRFLNWMPAALKMPEPELIDHAGLDSAVYLRIYLIGLKIFVPIALLAWSILVPVNWTSHGLQLAKLRNVTSSDIDKLSISNIENGSDRFWTHLVMAYAFTFWTCYVLMKEYEKVAAMRLAFLQNEQRRPDQFTVLVRNVPADPDESISDSVEHFFLVNHPDHYLTHQVVYNANDLAALVEQKKSTQNWLDYYQLKYTRNQEHKPRIKTGFLGLWGKKVDAIDHYIAEIEKLNEQIMEERKKVKKDDTSVMPAAFVSFKTRWGAAVSAQTQQSSDPTEWLTEWAPEAREVFWSNLAIPYVSLTVRRLIMHIAFFFLTFFFMIPIAFVQSLASIEGIEKNAPFLKSIIENDLFKSVIQGFLPGIVLKLFLIFLPSILMVMSKFEGFVSLSSLERRAAFRYYIFNLINVFLGSVITGSAFEQLDSFLKQSAKE 499          
BLAST of Psat4g005520.4 vs. DB:Swiss
Match: CSCL6_ARATH (CSC1-like protein At1g62320 OS=Arabidopsis thaliana OX=3702 GN=At1g62320 PE=3 SV=2)

HSP 1 Score: 726.472 bits (1874), Expect = 0.000e+0
Identity = 359/498 (72.09%), Postives = 432/498 (86.75%), Query Frame = 1
Query:    1 MASLKDIGVAAGINILSAFIFFVAFAILRLQPLNDRVYFPKWYLKGLRTDPVHGGAFVRKVVNLDWRSYIRFLNWMPAALRMPEPELIDHAGLDSVVYLRIYLLGLKIFVPIAFLAWAMLVPVNWTSTGLEIAGVKNITSSDIDKLSISNVQRGSERFWSHIIAAYAFTFWTCYILMKEYGKVAAMRLQFLAAEKRRPDQFSVLVRNIPPDPDESVSELVEHFFLVNHSNTYLTHQVVYNANRLAKLVKKKSKMQNWLIYYQNKLDRT-SIRPEMKTGFLGCCGTKVDSIDHYTTEIDKLSKEIALERDKVTNDPKSTMPAAFVSFKSRWGAAVCAQTQQTRNPTLWLTEWAPEPRDVYWPNLAIPYVSLTVRRLIVAVAXXXXXXXXMIPIAIVQALASLDGIEKAAPWLKPLVSVPFIKSFIQGFLPGIALKLFLIFLPSILMMMSKFEGFGSISSLERRSASRFYLFSFVNIFLGNILTGTAFQQLDSFIHQPAN 1491
            MA+L DIG+AA INILSA IF + FAILR+QP NDRVYFPKWYLKG+R+ PV+ GAFV K++NLD+RSY+RFLNWMP AL+MPEPELIDHAGLDS VYLRIYL+GLKIF PIA L+W++LVPVNWTS GL++A ++N+TSS+IDKLSISNV+RGS+RFW+H++ AYAFTFWTCY+LMKEY K+AAMRL FL +EKRR DQF+VLVRN+PPD DES+SE V+HFFLVNH + YLTHQVVYNAN LAKLV+ K KMQNWL YYQ K  R    RP +K GFLG  G KVD++DHYT EI+KLS++I  ER ++  D KS M AAFVSFK+RWGAAVCAQTQQT+NPT WLTEWAPE R++YWPNLA+PYVSLTVRR ++ +AFFFLTFFF+IPIA VQ+LAS++GIEK+AP+L P+V    +KS IQGFLPGI LKLFLIFLP+ILM+MSKFEGF SISSLERR+A R+Y+F+ VN+FLG+++TG+AF+QLDSF+ Q AN
Sbjct:    1 MATLADIGLAAAINILSALIFLLLFAILRIQPFNDRVYFPKWYLKGVRSSPVNSGAFVSKIMNLDFRSYVRFLNWMPDALKMPEPELIDHAGLDSAVYLRIYLIGLKIFGPIALLSWSILVPVNWTSDGLQLAKLRNVTSSNIDKLSISNVERGSDRFWAHLVMAYAFTFWTCYVLMKEYEKIAAMRLSFLQSEKRRADQFTVLVRNVPPDSDESISENVQHFFLVNHPDHYLTHQVVYNANELAKLVEDKKKMQNWLDYYQLKYTRNKEQRPRVKMGFLGLWGKKVDAMDHYTAEIEKLSEQIMEERKRIKKDDKSVMQAAFVSFKTRWGAAVCAQTQQTKNPTEWLTEWAPEAREMYWPNLAMPYVSLTVRRFVMHIAFFFLTFFFIIPIAFVQSLASIEGIEKSAPFLSPIVKNKLMKSLIQGFLPGIVLKLFLIFLPTILMIMSKFEGFISISSLERRAAFRYYIFNLVNVFLGSVITGSAFEQLDSFLKQSAN 498          
BLAST of Psat4g005520.4 vs. DB:Swiss
Match: CSCL5_ARATH (Protein OSCA1 OS=Arabidopsis thaliana OX=3702 GN=OSCA1 PE=1 SV=1)

HSP 1 Score: 725.702 bits (1872), Expect = 0.000e+0
Identity = 363/501 (72.46%), Postives = 422/501 (84.23%), Query Frame = 1
Query:    1 MASLKDIGVAAGINILSAFIFFVAFAILRLQPLNDRVYFPKWYLKGLRTDPVHGGAFVRKVVNLDWRSYIRFLNWMPAALRMPEPELIDHAGLDSVVYLRIYLLGLKIFVPIAFLAWAMLVPVNWTSTGLEIAG-VKNITSSDIDKLSISNVQRGSERFWSHIIAAYAFTFWTCYILMKEYGKVAAMRLQFLAAEKRRPDQFSVLVRNIPPDPDESVSELVEHFFLVNHSNTYLTHQVVYNANRLAKLVKKKSKMQNWLIYYQNKLDR--TSIRPEMKTGFLGCCGTKVDSIDHYTTEIDKLSKEIALERDKVTNDPKSTMPAAFVSFKSRWGAAVCAQTQQTRNPTLWLTEWAPEPRDVYWPNLAIPYVSLTVRRLIVAVAXXXXXXXXMIPIAIVQALASLDGIEKAAPWLKPLVSVPFIKSFIQGFLPGIALKLFLIFLPSILMMMSKFEGFGSISSLERRSASRFYLFSFVNIFLGNILTGTAFQQLDSFIHQPANQ 1494
            MA+LKDIGV+AGINIL+AFIFF+ FA LRLQP NDRVYF KWYL+GLR+ P  GG F  + VNL+ RSY++FL+WMP AL+MPE ELIDHAGLDSVVYLRIY LGLKIF PIA LAWA+LVPVNWT+  LE+A   KN+TSSDIDKL+ISN+  GS RFW+HII AYAFT WTCY+LMKEY  VA MRLQFLA+E RRPDQF+VLVRN+PPDPDE+VSELVEHFFLVNH + YLTHQVV NAN+LA LV KK+K+QNWL YYQ K  R  + IRP  K G LG CG KVD+I+HY  E+DK SKEIA ER+ V ND KS MPA+FVSFK+RW AAVCAQT QTRNPT WLTEWA EPRD+YWPNLAIPYVSLTVRRL++ VAFFFLTFFF+IPIA VQ+LA+++GIEK AP+LK ++   FIKS IQG L GIALKLFLIFLP+ILM MSKFEGF S+S LERRSASR+Y+F+ VN+FLG+++ G AF+QL+SF++Q  NQ
Sbjct:    1 MATLKDIGVSAGINILTAFIFFIIFAFLRLQPFNDRVYFSKWYLRGLRSSPASGGGFAGRFVNLELRSYLKFLHWMPEALKMPERELIDHAGLDSVVYLRIYWLGLKIFAPIAMLAWAVLVPVNWTNNELELAKHFKNVTSSDIDKLTISNIPEGSNRFWAHIIMAYAFTIWTCYMLMKEYETVANMRLQFLASEGRRPDQFTVLVRNVPPDPDETVSELVEHFFLVNHPDNYLTHQVVCNANKLADLVSKKTKLQNWLDYYQLKYTRNNSQIRPITKLGCLGLCGQKVDAIEHYIAEVDKTSKEIAEERENVVNDQKSVMPASFVSFKTRWAAAVCAQTTQTRNPTEWLTEWAAEPRDIYWPNLAIPYVSLTVRRLVMNVAFFFLTFFFIIPIAFVQSLATIEGIEKVAPFLKVIIEKDFIKSLIQGLLAGIALKLFLIFLPAILMTMSKFEGFTSVSFLERRSASRYYIFNLVNVFLGSVIAGAAFEQLNSFLNQSPNQ 501          
BLAST of Psat4g005520.4 vs. DB:Swiss
Match: CSCL4_ARATH (CSC1-like protein At3g21620 OS=Arabidopsis thaliana OX=3702 GN=At3g21620 PE=2 SV=1)

HSP 1 Score: 711.835 bits (1836), Expect = 0.000e+0
Identity = 353/499 (70.74%), Postives = 423/499 (84.77%), Query Frame = 1
Query:    1 MASLKDIGVAAGINILSAFIFFVAFAILRLQPLNDRVYFPKWYLKGLRTDPVHGGAFVRKVVNLDWRSYIRFLNWMPAALRMPEPELIDHAGLDSVVYLRIYLLGLKIFVPIAFLAWAMLVPVNWTSTGLEIAGVKNITSSDIDKLSISNVQRGSERFWSHIIAAYAFTFWTCYILMKEYGKVAAMRLQFLAAEKRRPDQFSVLVRNIPPDPDESVSELVEHFFLVNHSNTYLTHQVVYNANRLAKLVKKKSKMQNWLIYYQNKLDRT-SIRPEMKTGFLGCCGTKVDSIDHYTTEIDKLSKEIALERDKVTNDPKSTMPAAFVSFKSRWGAAVCAQTQQTRNPTLWLTEWAPEPRDVYWPNLAIPYVSLTVRRLIVAVAXXXXXXXXMIPIAIVQALASLDGIEKAAPWLKPLVSVPFIKSFIQGFLPGIALKLFLIFLPSILMMMSKFEGFGSISSLERRSASRFYLFSFVNIFLGNILTGTAFQQLDSFIHQPANQ 1494
            MA+L DIGVAA INIL+AF FF+AFAILRLQP+NDRVYFPKWYLKGLR+ P+  G F  K VNLD+RSYIRFLNWMP ALRMPEPELIDHAGLDSVVYLRIYLLGLKIF PIA +A+ ++VPVNWT++ L+   +KN+T SDIDKLSISN+  GS RFW H+  AY  TFWTC++L +EY  +A+MRLQFLA+E RRPDQF+VLVRNIPPDPDESVSELVEHFF VNH + YLT+Q VYNAN+L++LV+K+ K+QNWL YYQNK  R  S RP +K GFLGC G +VD+IDHY  +I+ L+++I+ E++ V +  KS +PAAFVSFK RWGA VC+QTQQ+RNPT WLTEWAPEPRD+YW NLA+PYV LT+RRL++AVAFFFLTFFFMIPIA VQ LA+++GIEKA P+LKPL+ V  +KSFIQGFLPGIALK+FLI LPSILM+MSKFEGF S SSLERR ASR+Y+F F+N+FL +I+ GTA QQLDSF++Q A +
Sbjct:    1 MATLTDIGVAATINILTAFAFFIAFAILRLQPVNDRVYFPKWYLKGLRSSPIKTGGFASKFVNLDFRSYIRFLNWMPQALRMPEPELIDHAGLDSVVYLRIYLLGLKIFFPIACIAFTVMVPVNWTNSTLD--QLKNLTFSDIDKLSISNIPTGSSRFWVHLCMAYVITFWTCFVLQREYKHIASMRLQFLASEHRRPDQFTVLVRNIPPDPDESVSELVEHFFKVNHPDYYLTYQAVYNANKLSELVQKRMKLQNWLDYYQNKHSRNPSKRPLIKIGFLGCWGEEVDAIDHYIEKIEGLTRKISEEKETVMSSTKSLVPAAFVSFKKRWGAVVCSQTQQSRNPTEWLTEWAPEPRDIYWDNLALPYVQLTIRRLVIAVAFFFLTFFFMIPIAFVQTLANIEGIEKAVPFLKPLIEVKTVKSFIQGFLPGIALKIFLIVLPSILMLMSKFEGFISKSSLERRCASRYYMFQFINVFLCSIIAGTALQQLDSFLNQSATE 497          
BLAST of Psat4g005520.4 vs. DB:Swiss
Match: CSCL3_ARATH (CSC1-like protein At4g15430 OS=Arabidopsis thaliana OX=3702 GN=At4g15430 PE=2 SV=1)

HSP 1 Score: 685.256 bits (1767), Expect = 0.000e+0
Identity = 332/498 (66.67%), Postives = 407/498 (81.73%), Query Frame = 1
Query:    1 MASLKDIGVAAGINILSAFIFFVAFAILRLQPLNDRVYFPKWYLKGLRTDPVHGGAFVRKVVNLDWRSYIRFLNWMPAALRMPEPELIDHAGLDSVVYLRIYLLGLKIFVPIAFLAWAMLVPVNWTSTGLEIAGVKNITSSDIDKLSISNVQRGSERFWSHIIAAYAFTFWTCYILMKEYGKVAAMRLQFLAAEKRRPDQFSVLVRNIPPDPDESVSELVEHFFLVNHSNTYLTHQVVYNANRLAKLVKKKSKMQNWLIYYQNKLDRT-SIRPEMKTGFLGCCGTKVDSIDHYTTEIDKLSKEIALERDKVTNDPKSTMPAAFVSFKSRWGAAVCAQTQQTRNPTLWLTEWAPEPRDVYWPNLAIPYVSLTVRRLIVAVAXXXXXXXXMIPIAIVQALASLDGIEKAAPWLKPLVSVPFIKSFIQGFLPGIALKLFLIFLPSILMMMSKFEGFGSISSLERRSASRFYLFSFVNIFLGNILTGTAFQQLDSFIHQPAN 1491
            MA++ DIGVAA INI++AF F +AFAI R+QP+NDRVYFPKWYLKGLR+  +  G F  K +NLD+RSYIRFLNWMP AL+MPEPEL+DHAGLDSVVYLRIYLLGLKIF PIA +A+  +VPVNWT+ GL+     NI+ SDIDKLS+SN+  GS RFW H+  AYA TFWTC+IL +EY  +A MRLQFLA ++RRP+QF+VLVRNIP DP ES+ ELVEHFF VNH + YLT Q V++A +L++LV  + +MQN L Y  NK  R  S RP +K GFLGCCG + D I +YT+ ++ L++EI+ E+ ++    KS +PAAFVSFKSRWGAAVCAQTQQTRNPT WLTEWA EPRD+Y+ NLA+PYV L +RRLIV VA+FFLTFFFMIPIA VQ+LA+++GIEKA P+LKPL+ V  +KS IQGFLPGIALK+FL+FLP ILM MSKFEGF S SSLERR+A+RFY+F F+N+FLG+I+TGTAFQQL+SF++Q AN
Sbjct:    1 MATINDIGVAAAINIVTAFAFLLAFAIFRIQPVNDRVYFPKWYLKGLRSSSIQTGGFGSKFINLDFRSYIRFLNWMPEALKMPEPELVDHAGLDSVVYLRIYLLGLKIFFPIACVAFTTMVPVNWTNKGLDRLRHSNISFSDIDKLSLSNIPNGSPRFWVHLCMAYAITFWTCFILKREYQNIALMRLQFLANDQRRPNQFTVLVRNIPADPHESICELVEHFFKVNHPDHYLTFQAVHDATKLSELVLTRKQMQNLLDYNINKHMRNLSNRPVIKMGFLGCCGEEADGIKYYTSVVEGLTREISEEKQRLRTGTKSIVPAAFVSFKSRWGAAVCAQTQQTRNPTEWLTEWAAEPRDIYYDNLALPYVDLKIRRLIVGVAYFFLTFFFMIPIAFVQSLANIEGIEKAFPFLKPLIEVKLLKSIIQGFLPGIALKIFLLFLPRILMQMSKFEGFVSTSSLERRAATRFYMFQFINVFLGSIVTGTAFQQLNSFLNQSAN 498          
BLAST of Psat4g005520.4 vs. DB:Swiss
Match: CSCL2_ARATH (CSC1-like protein At4g02900 OS=Arabidopsis thaliana OX=3702 GN=At4g02900 PE=3 SV=1)

HSP 1 Score: 660.988 bits (1704), Expect = 0.000e+0
Identity = 326/499 (65.33%), Postives = 401/499 (80.36%), Query Frame = 1
Query:    1 MASLKDIGVAAGINILSAFIFFVAFAILRLQPLNDRVYFPKWYLKGLRTDPVHGGAFVRKVVNLDWRSYIRFLNWMPAALRMPEPELIDHAGLDSVVYLRIYLLGLKIFVPIAFLAWAMLVPVNWTSTGLEIAGVKNITSSDIDKLSISNVQRGSERFWSHIIAAYAFTFWTCYILMKEYGKVAAMRLQFLAAEKRRPDQFSVLVRNIPPDPDESVSELVEHFFLVNHSNTYLTHQVVYNANRLAKLVKKKSKMQNWLIYYQNKLDRT-SIRPEMKTGFLGCCGTKVDSIDHYTTEIDKLSKEIALERDKVTNDPKSTMPAAFVSFKSRWGAAVCAQTQQTRNPTLWLTEWAPEPRDVYWPNLAIPYVSLTVRRLIVAVAXXXXXXXXMIPIAIVQALASLDGIEKAAPWLKPLVSVPFIKSFIQGFLPGIALKLFLIFLPSILMMMSKFEGFGSISSLERRSASRFYLFSFVNIFLGNILTGTAFQQLDSFIHQPANQ 1494
            MAS++DIG++A IN+LSAF F  AFA+LRLQP+NDRVYFPKWYLKG+R  P      + + VNLDW +Y++FLNWMPAAL+MPEPELI+HAGLDS VY+RIYLLGLK+FVPI  LA+ +LVPVNWT   LE   + ++T S++DKLSISNV  GS RFW+HI   Y  TFWTCYIL  EY  VA MRL+ LAAE RRPDQ +VLVRN+PPDPDESV+E VEHFF VNH + YL HQVVYNAN LAKLV ++  MQNWL YY+NK +R  S RP  KTG+ G  GT VD+ID YT+++D L+++ A+ER+K+ NDPK+ MPAAFVSF+SRWG AVCAQTQQ  NPT+WLTEWAPEPRDV+W NLAIPYV L++RRL+  VA FFL F FMIPIA VQ+LA+L+GI+K  P+LKP++ +  +KS IQGFLPGIALK+FLI LP+ILM MS+ EG+ S+S L+RRSA +++ F  VN+FLG+I+TGTAFQQL SF+ QP  +
Sbjct:    1 MASVQDIGLSAAINLLSAFAFLFAFAMLRLQPVNDRVYFPKWYLKGIRGSPTRSRGIMTRFVNLDWTTYVKFLNWMPAALQMPEPELIEHAGLDSAVYIRIYLLGLKMFVPITLLAFGVLVPVNWTGETLE--NIDDLTFSNVDKLSISNVPPGSPRFWAHITMTYVITFWTCYILYMEYKAVANMRLRHLAAESRRPDQLTVLVRNVPPDPDESVNEHVEHFFCVNHPDHYLCHQVVYNANDLAKLVAQRKAMQNWLTYYENKFERKPSSRPTTKTGYGGFWGTTVDAIDFYTSKMDILAEQEAVEREKIMNDPKAIMPAAFVSFRSRWGTAVCAQTQQCHNPTIWLTEWAPEPRDVFWDNLAIPYVELSIRRLLTTVALFFLIFCFMIPIAFVQSLANLEGIQKVLPFLKPVIEMKTVKSVIQGFLPGIALKIFLIILPTILMTMSQIEGYTSLSYLDRRSAEKYFWFIIVNVFLGSIITGTAFQQLKSFLEQPPTE 497          
BLAST of Psat4g005520.4 vs. DB:Swiss
Match: CSCL1_ARATH (CSC1-like protein At1g32090 OS=Arabidopsis thaliana OX=3702 GN=At1g32090 PE=1 SV=1)

HSP 1 Score: 573.933 bits (1478), Expect = 0.000e+0
Identity = 279/500 (55.80%), Postives = 373/500 (74.60%), Query Frame = 1
Query:    1 MASLKDIGVAAGINILSAFIFFVAFAILRLQPLNDRVYFPKWYLKGLRTDPVHGG-AFVRKVVNLDWRSYIRFLNWMPAALRMPEPELIDHAGLDSVVYLRIYLLGLKIFVPIAFLAWAMLVPVNWTSTGLEIAGVKNITSSDIDKLSISNVQRGSERFWSHIIAAYAFTFWTCYILMKEYGKVAAMRLQFLAAEKRRPDQFSVLVRNIPPDPDESVSELVEHFFLVNHSNTYLTHQVVYNANRLAKLVKKKSKMQNWLIYYQNKLDRTSIR-PEMKTGFLGCCGTKVDSIDHYTTEIDKLSKEIALERDKVTNDPKSTMPAAFVSFKSRWGAAVCAQTQQTRNPTLWLTEWAPEPRDVYWPNLAIPYVSLTVRRLIVAVAXXXXXXXXMIPIAIVQALASLDGIEKAAPWLKPLVSVPFIKSFIQGFLPGIALKLFLIFLPSILMMMSKFEGFGSISSLERRSASRFYLFSFVNIFLGNILTGTAFQQLDSFIHQPANQ 1494
            MA+L+DIGV+A IN+  AF+F +AFA+LR+QP+NDRVYFPKWYL G R  P       V K VNL++++Y  FLNWMP A++M E E+I HAGLDS ++LRIY LGLKIF P+  LA  +LV     S+G      K +  S+IDKLSISNVQ  S +F+ HI   Y FTFW C++L +EY  VA MRLQ+LA+++RRP+QF+V+VRN+P  P  SV + V+ FF  NH   YL HQ VYNAN  AKLVK+++K+Q W  YY  K  R   + P  +TGFLG  G +VDSI++Y  +I +    ++LER KV  D K  +P AFVSF SRWGAAVCAQTQQ++NPTLWLT  APEPRD+YW NLAIP++SLT+R+L++ V+ F L FF+MIPIA VQ+LA+L+G+++ AP+L+P+  + FIKSF+QGFLPG+ALK+FL  LP++L++MSK EG+ ++S+LERR+A+++Y F  VN+FLG+I+ GTAF+QL SF+HQ  +Q
Sbjct:    1 MATLQDIGVSALINLFGAFLFLIAFAVLRIQPINDRVYFPKWYLTGERNSPRRSDRTLVGKFVNLNYKTYFTFLNWMPQAMKMSESEIIRHAGLDSAIFLRIYTLGLKIFAPVMVLALVVLV-PVNVSSGTLFFLKKELVVSNIDKLSISNVQPKSSKFFFHIAVEYIFTFWACFMLYREYNNVAIMRLQYLASQRRRPEQFTVVVRNVPDMPGHSVPDTVDQFFKTNHPEHYLCHQAVYNANTYAKLVKQRAKLQRWFDYYVLKHQRNPHKQPTCRTGFLGLWGKRVDSIEYYKQQIKEFDHNMSLERQKVLKDSKLMLPVAFVSFDSRWGAAVCAQTQQSKNPTLWLTSSAPEPRDIYWQNLAIPFISLTIRKLVIGVSVFALVFFYMIPIAFVQSLANLEGLDRVAPFLRPVTRLDFIKSFLQGFLPGLALKIFLWILPTVLLIMSKIEGYIALSTLERRAAAKYYYFMLVNVFLGSIIAGTAFEQLHSFLHQSPSQ 499          
BLAST of Psat4g005520.4 vs. DB:Swiss
Match: CSCLC_ARATH (CSC1-like protein HYP1 OS=Arabidopsis thaliana OX=3702 GN=HYP1 PE=2 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 3.282e-84
Identity = 158/484 (32.64%), Postives = 269/484 (55.58%), Query Frame = 1
Query:   28 AAGINILSAFIFFVAFAILRLQPLNDRVYFPKWYLKGLRTDPVHGGAFVRKVVNLDWRSYIRFLNWMPAALRMPEPELIDHAGLDSVVYLRIYLLGLKIFVPIAFLAWAMLVPVNWTSTGLEIAGVKNITSSDIDKLSISNVQRGSERFWSHIIAAYAFTFWTCYILMKEYGKVAAMRLQFLAAEKRRPDQFSVLVRNIPPDPDESVSELVEHFFLVNHSNTYLTHQVVYNANRLAKLVKKKSKMQNWLIYYQNKLDRTSIRPEMKTGFLGCCGTKVDSIDHYTTEIDKLSKEIALERDKVTNDPKSTMPAAFVSFKSRWGAAVCAQTQQTRNPTLWLTEWAPEPRDVYWPNLAIPYVSLTVRRLIVAVAXXXXXXXXMIPIAIVQALASLDGIEKAAPWLKPLVSVPFIKSFIQGFLPGIALKLFLIFLPSILMMMSKFEGFGSISSLERRSASRFYLFSFVNIFLGNILTGTAFQQLDSFIH 1479
            + GIN+   F+FF  ++ILR QP N  VY P+   K  ++         ++    +    +    W+  AL     E++ + GLD++V++R+++  +++F   + +   +L+PVN+   G E     ++    +D  SISNV  GS + W H  A Y FT   C +L  E+  +   R+  L + K +P +F+VLV  +P     S+SE VE+FF   HS++YL+H VV+  ++L  L+    K+   L   + K    S +     GFLG  G  VD +DHY  ++DKL  ++ L++  +  +    +PAAFVSF++R GAA+    QQ  +PT WLTE APEP DV+WP     +V   +  ++V VAF  L   +++P+ +VQ LA+L  +E   P+LK ++++  +   I G+LP +  +LFL+ +P I++++S  +GF S S +E+ +  +  +F+  N F  N+L+G+A  +++ F+ 
Sbjct:    9 SVGINLGLCFLFFTLYSILRKQPSNVTVYGPRLVKKDGKS---------QQSNEFNLERLLPTAGWVKRALEPTNDEILSNLGLDALVFIRVFVFSIRVFSFASVVGIFILLPVNYM--GTEFEEFFDLPKKSMDNFSISNVNDGSNKLWIHFCAIYIFTAVVCSLLYYEHKYILTKRIAHLYSSKPQPQEFTVLVSGVPLVSGNSISETVENFFREYHSSSYLSHIVVHRTDKLKVLMNDAEKLYKKLT--RVKSGSISRQKSRWGGFLGMFGNNVDVVDHYQKKLDKLEDDMRLKQSLLAGE---EVPAAFVSFRTRHGAAIATNIQQGIDPTQWLTEAAPEPEDVHWPFFTASFVRRWISNVVVLVAFVALLILYIVPVVLVQGLANLHQLETWFPFLKGILNMKIVSQVITGYLPSLIFQLFLLIVPPIMLLLSSMQGFISHSQIEKSACIKLLIFTVWNSFFANVLSGSALYRVNVFLE 476          
BLAST of Psat4g005520.4 vs. DB:Swiss
Match: CSCLA_ARATH (CSC1-like protein RXW8 OS=Arabidopsis thaliana OX=3702 GN=RXW8 PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 1.677e-75
Identity = 161/485 (33.20%), Postives = 258/485 (53.20%), Query Frame = 1
Query:   28 AAGINILSAFIFFVAFAILRLQPLNDRVYFPKWYLKGLRTDPVHGGAFVRKVVNLDWRSYIRFLNWMPAALRMPEPELIDHAGLDSVVYLRIYLLGLKIFVPIAFLAWAMLVPVNWTSTGLEIAGVKNITSSDIDKLSISNVQRGSERFWSHIIAAYAFTFWTCYILMKEYGKVAAMRLQFLAAEKRRPDQFSVLVRNIPPDPDESVSELVEHFFLVNHSNTYLTHQVVYNANRLAKLVKKKSKMQNWLIYYQNKLD-RTSIRPEMKTGFLGCCG--TKVDSIDHYTTEIDKLSKEIALERDKVTNDPKSTMPAAFVSFKSRWGAAVCAQTQQTRNPTLWLTEWAPEPRDVYWPNLAIPYVSLTVRRLIVAVAXXXXXXXXMIPIAIVQALASLDGIEKAAPWLKPLVSVPFIKSFIQGFLPGIALKLFLIFLPSILMMMSKFEGFGSISSLERRSASRFYLFSFVNIFLGNILTGTAFQQLDSF 1473
            +AGINI    +    ++ILR QP N  VYF      G R   V GGA  R+     +  ++   +W+  A    E EL+  AGLD+VV+LR+ +  ++IF  +A +  A ++PVN+    + +    ++ SS++   +I N++ GS+  W H +A Y  T   C +L  EY  +A MRL  +     +P QF+VL+R IP  P++S S+ +  FF   +S++Y++HQ+VY+   + +L++   +M   L +   +++ + S+RP         CG  T   S    + E D +      E    T   +    AAFV FK+R+ A V ++  Q+ NP LW+T+ APEP DVYW NL IPY  L +R++   V      F F+IP+  +Q L  L  +  A P+L+ ++S  FI   I G+LP + L LF   +P ++M  S  EG  S S  ++ +  +   F+  N+F  NIL+G+  +QL+ F
Sbjct:    9 SAGINISICIVLLSLYSILRKQPANYCVYF------GRRL--VCGGA--RRYDPFWYERFVPSPSWLVKAWETSEDELLAAAGLDAVVFLRMVIFSIRIFFIVAVICIAFVLPVNYYGQPM-VHKEIHLESSEV--FTIENLKEGSKWLWVHCLALYIITSAACLLLYFEYSTIAKMRLGHITGCASKPSQFTVLIRAIPWSPEQSYSDTLSKFFTNYYSSSYVSHQMVYHNGIIQRLLRDAERMCQTLKHVSPEINCKPSLRP------CTFCGGPTATSSFHILSNEADSVKGMELGELTMTTTTTEQERSAAFVFFKTRYDALVVSEVLQSSNPMLWVTDLAPEPHDVYWKNLNIPYRQLWIRKIATLVGAVAFMFVFLIPVTFIQGLTQLVQLSHAFPFLRGILSKNFINQVITGYLPSVILILFFYAVPPLMMYFSALEGCISRSIRKKSACIKVLYFTIWNVFFVNILSGSVIRQLNVF 474          
The following BLAST results are available for this feature:
BLAST of Psat4g005520.4 vs. DB:Swiss
Analysis Date: 2019-09-12 (BLAST: P. sativum Cameor genome v1a vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
CSC1_ARATH0.000e+073.20Calcium permeable stress-gated cation channel 1 OS... [more]
CSCL7_ARATH0.000e+071.14CSC1-like protein At1g11960 OS=Arabidopsis thalian... [more]
CSCL6_ARATH0.000e+072.09CSC1-like protein At1g62320 OS=Arabidopsis thalian... [more]
CSCL5_ARATH0.000e+072.46Protein OSCA1 OS=Arabidopsis thaliana OX=3702 GN=O... [more]
CSCL4_ARATH0.000e+070.74CSC1-like protein At3g21620 OS=Arabidopsis thalian... [more]
CSCL3_ARATH0.000e+066.67CSC1-like protein At4g15430 OS=Arabidopsis thalian... [more]
CSCL2_ARATH0.000e+065.33CSC1-like protein At4g02900 OS=Arabidopsis thalian... [more]
CSCL1_ARATH0.000e+055.80CSC1-like protein At1g32090 OS=Arabidopsis thalian... [more]
CSCLC_ARATH3.282e-8432.64CSC1-like protein HYP1 OS=Arabidopsis thaliana OX=... [more]
CSCLA_ARATH1.677e-7533.20CSC1-like protein RXW8 OS=Arabidopsis thaliana OX=... [more]
back to top
InterPro
Analysis Name: InterProScan: P. sativum Cameor genome v1a
Date Performed: 2019-09-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 289..309
IPR02781510TM putative phosphate transporter, cytosolic domainPFAMPF14703PHM7_cytcoord: 200..361
e-value: 9.4E-45
score: 153.0
IPR003864Calcium-dependent channel, 7TM region, putative phosphatePFAMPF02714RSN1_7TMcoord: 372..496
e-value: 5.9E-30
score: 104.5
IPR032880Calcium permeable stress-gated cation channel 1, N-terminal transmembrane domainPFAMPF13967RSN1_TMcoord: 7..179
e-value: 2.9E-48
score: 163.6

Sequences
The following sequences are available for this feature:

mRNA sequence

>Psat4g005520.4_Ps_Cameor_v1a ID=Psat4g005520.4_Ps_Cameor_v1a; Name=Psat4g005520.4; organism=Pisum sativum; type=mRNA; length=6870bp
ATAGCCGTTACCACACGCCACGTGTCATTTTGCCGACAATCGGCTTCTAC
TTCACACAATCAATGCTCACCTGTTTATTTGCTGTTCTTCTCGAATTCTC
CTCACAACAACAACAATATTATCCGCATTTTTTCATTTTATTTTTTATTT
CAATAATAACAATTTATTTTAATTAATTAATTAATTGATAATAAGGAAAA
ATCAGTGTTTTATAATGGTAGCTTAAGCTTGTTCTAAGTACTCACTGGTA
CAAAGAACGATCTTCTAAGATATTCTCATATTCACCAATAACGTAACAAC
TAAGAATCATCACCACTTTCTTTTTTTTCCACCTTTTTCTCTTTCTTCAA
TCTAACCTAATCTCAACGATAATCCACACTACTAGTTGGTGTGTACAACA
GGAAAACCTCCAATTCATGTAGTTTCATTTCACTCCTCAACGGTGTTGGA
ATCTTCTTGCTTTCTTTCGTTTTCAAGATATCCTTTGATTCGCCTTTGGA
TCTTCGATTTATACATGCTTTGAGGGTTTCATCCTTGGCGACAACTACAA
AGTATCAACTTTTTCATCTTTTTCCTTTCAATTTTGTTGTTGTTTTGTTA
AGCTTAACTGTTTAGGATAGAATTACATACTAATTCATGTGAGTTTTTAT
TTCTATAATGAGAAAAAAGCTTTCTATTTGTGATTCTGTTGTAGTTCAAC
CAAAATAAGGGAATTTATGAGCTATGATAAATTACTTTCCTTTTTGGATG
TTTGAAATTTAGGGTAGATGAGAAATTAGTTATATATTGTTGCTGTAAAT
AGTATGGAAAGAAATGTTATGCTTATGTTTATTAAAGTATGTATGAAATT
AGTTGTGTGTTAGTTAATCTATAATTTTGTTTATTCAATTGGTTTAATTG
GTTCTCAGGAGAGTTGTGATTTGTTCTAGAGGAAGAAAAGATGGCCTCAC
TGAAAGATATTGGGGTTGCAGCTGGGATTAATATTTTGAGTGCATTTATC
TTCTTTGTGGCATTTGCTATTTTGAGGCTTCAGCCATTGAATGATAGGGT
ATACTTTCCGAAATGGTATCTCAAGGGTTTAAGAACGGATCCTGTGCATG
GAGGAGCCTTTGTGAGAAAGGTTGTTAATTTGGATTGGAGATCATATATT
AGGTTTTTGAATTGGATGCCAGCTGCACTTAGAATGCCAGAGCCTGAGCT
TATTGATCATGCTGGATTGGATTCTGTTGTTTACTTGAGGATTTACTTGT
TGGGGTATGGTCATCATCATGGACAATGTTTGAATTGAATACCACATTGG
TGAATATGATCCCTGATTTTTTGTTTGTTTCTTTTTGTTCAGACTTAAAA
TCTTTGTTCCTATAGCATTTCTGGCGTGGGCGATGCTGGTTCCTGTCAAC
TGGACAAGCACTGGGCTAGAAATAGCTGGGGTAAAAAACATTACTTCCAG
TGACATTGATAAGCTCTCAATTTCAAATGTCCAGCGTGGATCCGAAAGGT
TTGAAAACTAGTATCATTCAGTGCAATTACAGTTTTGTTTCTTCTTCTTG
ATATTGTTTGGTGAATTGTCTTCATATCCAAAGTACTTGCATGTCAAGAT
GTATTCTTGACCAAATATATATGGATTAACTAAGTCGAGACATTAGCTGG
GTGTGCAACTAGAAGTACATTTGTTAACTGTAAAAAATCTTGATTGTTTT
GCATCTTTTCTCAAGATACCGTTATTATATCTTAGTTATATTTGTTCTCA
TCAGTATCCTATAACTTCTCCATTCCAATTATCAATTTTTTGTTTTCAAT
TTTGTATTATTTCATTGGTTAGAGCTGTATAGTTGCTTTTATGGTGCATT
CATGTTAGTATTTGATTGTGTAAACTATTTTCAAGTATTGGCTTTTCTGA
AATTTTTGCTAAATCTTGTGATTTTCTAAAGTTTTACTCTCTATCCTAGG
TTTTGGTCACATATAATAGCTGCTTATGCATTTACCTTCTGGACATGCTA
TATTTTGATGAAGGAGTATGGAAAAGTTGCCGCAATGAGATTGCAGTTTC
TTGCAGCAGAAAAACGTCGTCCTGATCAATTTTCGGTAAAAAAAAATTGT
TCTCCATTTAAGAACTATTTTTATCTTTTTTTGGAAGCTTTGGATGAAGC
GTCAAATTCTGGTTTTATGTTTCTTGTGTTAGAGTGGGTATCCTTTTTAT
TTTAGGTGTGTAATGGTGACAAAAATGTTGAACCTAACACTTCATACATA
CCAAATCCCCTCACCACCAACCTAATCATAGTATTTAGAGGCAGTACTGA
GTCATTATTTCTAGGTAGACACAATTGTTACTTTCTACATTTAAAATAGG
TCGATTACCGGTGTGGATTCGCTAGAAATTTGGCATTCATAATAAGAACC
CAGCTATTCATATAAGTGAGTAATTAAGCAAAACAATATAGTGATGACAG
CTGTGCAGTATTTAGACATATCAAAGACATAAGAAACGACAAAGAGACTA
ACGGAAAGTTTTGTAAAAAAATAATAAAACGAGGTAGAAAAAAGATAATT
TAAACACCAAAGAGCTCTCCAATCTGTCAGTATCTTACTATAACCCAGTT
TGGGGAAATTAAAATCACGGGCAGAATTGTCACGCGTTGAAATTGAGATA
TTCCTTCATGCATATTTTGCTTATAGAATATATATTATTTTGAAGGTGCT
CGTTAGAAACATTCCACCAGATCCTGACGAATCTGTTAGTGAGCTTGTGG
AGCACTTCTTTCTGGTCAACCATTCGAATACCTATCTGACTCACCAGGTT
GGTTCCTACTATATACACTATGCTACCAGAATATTGTGTTCATTAATCAT
CTTGTTGATTTTGATATTTAAAATTTAAGAAACTTTGGGTGGTAAACATT
TTGAAAGTTGTTATTTGTCAAATTAGTTCTGAGATAATATTAAACCTGTT
GTTTGTCAAATTGATTCTGAGATAATGTTTATGAAACATGGAGTAGATTA
TTAACTAGATCTAGTGCAACAGATTAATTTTGCCCATTTATTTGGGAAAG
TAAAAAATAGTGTGTGACAGCATCTTTATTGCGACACTTGTATAGGTTGT
TTATAATGCAAACCGGTTGGCAAAATTGGTTAAAAAGAAGAGCAAGATGC
AGAATTGGCTCATCTATTATCAAAATAAGCTGGACAGAACTTCAATAAGA
CCAGAAATGAAGGTATTTAAGTTTTAATCTCACGTGCATTCAAATGTTGG
TATAATGATATTCAGATTTACCACAATCTTTCTTTTATATTTTACCAGAC
TGGTTTCCTTGGTTGTTGTGGAACGAAAGTAGATTCTATTGATCATTACA
CCACTGAAATTGACAAGCTGTCAAAAGAAGTAAGTACCATAATCTTTTTC
TGTTATAAATTTCACCCCACACTGCATGCAGTTTTTTTTGTAATATAAGT
TCATTATGCTAATAAAAAAAATTATTCCAACACAGTAATTAAATATAAAT
TTTGCAGAATTAATGTCACAGACTATGATGATATGCTAAACTTTAACTAG
TGTATCTAGTGTGTGCATTAATATTATTCTGCTTTTGACGAGTTATCTCA
CTAACTAGCTGCTTTGCAACTGTTGATGTAATAAATAGTTTTCTGATGGG
TCGCCTGAACTAAAACTGAAATTTGAAAGACTTCAAGAGATAGTGAAAGA
ACTTGTTTACCATAATAAAATTTTAAATGGGATAACATATGCGGAAACTT
TGGGCCTTATTGTTGTTTCATAATCATATTTGTTCTTTCAGAAATTTTCA
TGATACTTACTGTGATTCAAGTTTATCACCTTTTGCAGATAGCTTTAGAG
AGGGATAAGGTCACCAATGATCCCAAGTCTACCATGCCTGCTGCATTTGT
TTCTTTTAAAAGTCGATGGGGTGCTGCAGTTTGTGCTCAAACCCAACAAA
CCAGAAATCCAACACTTTGGTTGACTGAGTGGGCTCCAGAGCCACGGGAC
GTCTATTGGCCAAACTTAGCGATTCCATATGTTTCCCTAACTGTTAGAAG
GTTGATCGTAGCTGTTGCGTTCTTTTTTCTCACTTTCTTTTTCATGATCC
CCATTGCAATAGTACAAGCTCTTGCGAGTCTTGACGGAATAGAGAAAGCA
GCACCATGGTTGAAGCCGCTTGTTAGTGTGTAAGTCTAATCTCAAAATTG
GATCTCTGGAGATATGATTATGTCCACATTACTCACTGGATTTTATTTAT
TTGAATTAACTTCATTGTGCAGCCCTTTCATTAAGTCATTCATTCAGGGT
TTTCTACCTGGTATTGCATTGAAGCTTTTTCTTATCTTCTTACCGTCAAT
ATTGATGATGATGTCAAAATTTGAAGGCTTTGGATCTATATCTTCTCTTG
AGAGAAGATCGGCTTCTAGATTCTACCTTTTTAGTTTTGTGAATATATTT
CTTGGGAACATACTTACCGGGACAGCATTTCAACAGCTCGACTCTTTCAT
TCACCAACCAGCCAATCAGTAAGTCATTCAATTTAAGACAGTAGCTTCTT
CTTTCCTTTTCCTTTGATAATTATATTTTCATTTTTAATTGGCATTATAT
TTCCTGTGTTTGGAGTGCATCCATTTGCTCTCCTGCACTGAAAAGTTTGC
ATGGATATGAAACTTTTTGGTAATGTTGATTTTATCTGTGGTCAACTTAT
TAGCTTATGTAAATTATACTAGTACATACATAAGGGATTTTTTCCACTAT
TGGTTATGCTTTTTAGCTGTTTAAGAACCATGATGTTATTTTTGTTTACA
GTTAAAGTTGTTAGACACTATGCTACAAGCATGTCTTATTTATACTGTGT
TAGTATGATTAAGATTCCTTGTATATTATTCTCAGATATCCCATAACAAT
TGGCACTGCAATTCCTTTAAAAGCAAGTTTCTTCATCACCTATATAATGG
TTGATGGATGGTCCGGTATAGCTGCTGAGGTTTTGATGTTGAAACCACTA
ATTATATATCACTTGAAGAACTTCTTCTTGGTTAAGACTGAAAAGGACAG
GGAAGAGGCCATGGATCCTGGAAGTATAGGTTTCAACACTGGAGAACCCC
GCATACAATTGTACTTTCTGCTGGGCCTAGTCTATGCTGCAGTGACACCT
ACTGTTCTTCCTTTCATAATAATTTTCTTTGGGTTGGCATATGTTGTGTT
CCGCCATCAGGTAATGAGATGCTTGAGTTATGCTGTGGCCTATTTGGGTC
CCCTATTTGTGTTGCCATATACAAGATGAAAACTCTTAACTTCTAATTGC
AGATAATCAATGTTTATAATCAAGAATACGAGAGTGGTGCTGCATTCTGG
CCTGATGTCCATTTCCGTGTCATAATTGCACTGATAGTCTCACAGCTCGT
TCTTATGGGACTCTTAACCACCAAAAGAGCTGCTTCATCAACTCCTTTTC
TCATTGCACTCCCGGTACTGACGATATGGTTCCATATATACTGCAAAGGC
CGTTTCGAATCTGCATTTTCTAAATATCCCTTACAGGTATGTCAACTAGT
CATTTGGATGCTTGTTTCAAATTTGAAGAAGCTATGATGTGTTCATTGAT
GGTGGAGTTTGTTGTTTCAGTTATCATCTGTTCGATTGTTAGATATCCCT
AAAACCATTGAGCTATAACAATTTAAATGGCTAGAATTTACGACTGTACA
CCTGATTGTTGAAACACAACTAATTCTTATGCTTGAATACATAACTTTAC
CGCTGGCCAAATCTGCAACTCAGTTTCCTCTATCATGTAATTTTTATGTT
GCTTTTGTAAATCTGTACACAGGAAGCAATGATGAAAGATACATTAGAAC
GAGCTACAGACCCAAACCTGAACATAAAAGGTTACCTTCAACATGCTTAT
ATTCATCCAGTTTTTAAGGCTAGCCTTGAGGATGCTGATGAGGAGGAAGA
TGTAATGAGTCTAAAGTGGGAAACTGAGAGTGCTACTGTACCTACAAAAC
GCCATTCACGAAGGAATACACCATTGCCCAGCAGAGTTAGCGGCGCATCG
TCTCCATCTATGCTTGATGGCATTAAAAATGATCTAGAGTCATAGATCAT
TCACGGACCAAGAAATGATGTCATATTATTGAAATGAGACAAACCAGGAC
GTATGTGAATGTGAGTCTACATCAATGGACATGTGGTAGTGGTTGAAGCA
TATAAGCTGAGAAAGTTGAGTGGTCGTGCAAAAGCATTTTGGACTTTCTG
GTCAGCAGATGAAATATACCACAACATGCGGAGACTGTGAGGCAGAGATT
TTTTTTCATTATGTTTCAGATTTTGTTAATAGTGAGTTTGTTCCCTTAGT
AGATAGATAAACATGTTTTTCTATTTTTATCACCTAGCTTATAGAGATTT
GCATAACATTACACTATGGATACTGTAAATTATCATCCTAAATTGATTAT
GATTCTAGATTGTGTGTATAATTTTTCTCTTTTTTATAACATTTGAATTC
AAGAGGTTTTCTGTTAAATATTATCCCCAAGTTACTTGTGTCAAAATACT
CACACCTCACTCATTTGTTTGTGAACTTTAATCTATTTTATTCTCTATTG
ACACTATTATTATGATAATTTGTTAAGCTCTTATTTTCCCTTGTTGAGTT
GTGTTTACTATATTTTTGGTCCCCAACACTTCCACTAAAGAAAGCCTGAT
GTGAAGGGATATCTGTTATTTTTCTGCCACATTTCTTTGTTGTGTTGGAT
GTTGACACCTAAGTTTATTATGGATAATATTAACTTGTGCTTTTAAAAAT
TAAATAAATTGGGTATTGAATTATCCATTTATTATCTTTTCTTTTTTTAA
TTTTAGAATTAATTAAATTA
back to top

protein sequence of Psat4g005520.4_Ps_Cameor_v1a

>Psat4g005520.4_Ps_Cameor_v1a ID=Psat4g005520.4_Ps_Cameor_v1a; Name=Psat4g005520.4_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=499bp
MASLKDIGVAAGINILSAFIFFVAFAILRLQPLNDRVYFPKWYLKGLRTD
PVHGGAFVRKVVNLDWRSYIRFLNWMPAALRMPEPELIDHAGLDSVVYLR
IYLLGLKIFVPIAFLAWAMLVPVNWTSTGLEIAGVKNITSSDIDKLSISN
VQRGSERFWSHIIAAYAFTFWTCYILMKEYGKVAAMRLQFLAAEKRRPDQ
FSVLVRNIPPDPDESVSELVEHFFLVNHSNTYLTHQVVYNANRLAKLVKK
KSKMQNWLIYYQNKLDRTSIRPEMKTGFLGCCGTKVDSIDHYTTEIDKLS
KEIALERDKVTNDPKSTMPAAFVSFKSRWGAAVCAQTQQTRNPTLWLTEW
APEPRDVYWPNLAIPYVSLTVRRLIVAVAFFFLTFFFMIPIAIVQALASL
DGIEKAAPWLKPLVSVPFIKSFIQGFLPGIALKLFLIFLPSILMMMSKFE
GFGSISSLERRSASRFYLFSFVNIFLGNILTGTAFQQLDSFIHQPANQ*
back to top

mRNA from alignment at chr4LG4:5925247..5932116+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Psat4g005520.4_Ps_Cameor_v1a ID=Psat4g005520.4_Ps_Cameor_v1a; Name=Psat4g005520.4; organism=Pisum sativum; type=mRNA; length=6870bp; location=Sequence derived from: chr4LG4:5925247..5932116+ (Pisum sativum
ATAGCCGTTACCACACGCCACGTGTCATTTTGCCGACAATCGGCTTCTAC TTCACACAATCAATGCTCACCTGTTTATTTGCTGTTCTTCTCGAATTCTC CTCACAACAACAACAATATTATCCGCATTTTTTCATTTTATTTTTTATTT CAATAATAACAATTTATTTTAATTAATTAATTAATTGATAATAAGGAAAA ATCAGTGTTTTATAATGGTAGCTTAAGCTTGTTCTAAGTACTCACTGGTA CAAAGAACGATCTTCTAAGATATTCTCATATTCACCAATAACGTAACAAC TAAGAATCATCACCACTTTCTTTTTTTTCCACCTTTTTCTCTTTCTTCAA TCTAACCTAATCTCAACGATAATCCACACTACTAGTTGGTGTGTACAACA GGAAAACCTCCAATTCATGTAGTTTCATTTCACTCCTCAACGGTGTTGGA ATCTTCTTGCTTTCTTTCGTTTTCAAGATATCCTTTGATTCGCCTTTGGA TCTTCGATTTATACATGCTTTGAGGGTTTCATCCTTGGCGACAACTACAA AGTATCAACTTTTTCATCTTTTTCCTTTCAATTTTGTTGTTGTTTTGTTA AGCTTAACTGTTTAGGATAGAATTACATACTAATTCATGTGAGTTTTTAT TTCTATAATGAGAAAAAAGCTTTCTATTTGTGATTCTGTTGTAGTTCAAC CAAAATAAGGGAATTTATGAGCTATGATAAATTACTTTCCTTTTTGGATG TTTGAAATTTAGGGTAGATGAGAAATTAGTTATATATTGTTGCTGTAAAT AGTATGGAAAGAAATGTTATGCTTATGTTTATTAAAGTATGTATGAAATT AGTTGTGTGTTAGTTAATCTATAATTTTGTTTATTCAATTGGTTTAATTG GTTCTCAGGAGAGTTGTGATTTGTTCTAGAGGAAGAAAAGATGGCCTCAC TGAAAGATATTGGGGTTGCAGCTGGGATTAATATTTTGAGTGCATTTATC TTCTTTGTGGCATTTGCTATTTTGAGGCTTCAGCCATTGAATGATAGGGT ATACTTTCCGAAATGGTATCTCAAGGGTTTAAGAACGGATCCTGTGCATG GAGGAGCCTTTGTGAGAAAGGTTGTTAATTTGGATTGGAGATCATATATT AGGTTTTTGAATTGGATGCCAGCTGCACTTAGAATGCCAGAGCCTGAGCT TATTGATCATGCTGGATTGGATTCTGTTGTTTACTTGAGGATTTACTTGT TGGGGTATGGTCATCATCATGGACAATGTTTGAATTGAATACCACATTGG TGAATATGATCCCTGATTTTTTGTTTGTTTCTTTTTGTTCAGACTTAAAA TCTTTGTTCCTATAGCATTTCTGGCGTGGGCGATGCTGGTTCCTGTCAAC TGGACAAGCACTGGGCTAGAAATAGCTGGGGTAAAAAACATTACTTCCAG TGACATTGATAAGCTCTCAATTTCAAATGTCCAGCGTGGATCCGAAAGGT TTGAAAACTAGTATCATTCAGTGCAATTACAGTTTTGTTTCTTCTTCTTG ATATTGTTTGGTGAATTGTCTTCATATCCAAAGTACTTGCATGTCAAGAT GTATTCTTGACCAAATATATATGGATTAACTAAGTCGAGACATTAGCTGG GTGTGCAACTAGAAGTACATTTGTTAACTGTAAAAAATCTTGATTGTTTT GCATCTTTTCTCAAGATACCGTTATTATATCTTAGTTATATTTGTTCTCA TCAGTATCCTATAACTTCTCCATTCCAATTATCAATTTTTTGTTTTCAAT TTTGTATTATTTCATTGGTTAGAGCTGTATAGTTGCTTTTATGGTGCATT CATGTTAGTATTTGATTGTGTAAACTATTTTCAAGTATTGGCTTTTCTGA AATTTTTGCTAAATCTTGTGATTTTCTAAAGTTTTACTCTCTATCCTAGG TTTTGGTCACATATAATAGCTGCTTATGCATTTACCTTCTGGACATGCTA TATTTTGATGAAGGAGTATGGAAAAGTTGCCGCAATGAGATTGCAGTTTC TTGCAGCAGAAAAACGTCGTCCTGATCAATTTTCGGTAAAAAAAAATTGT TCTCCATTTAAGAACTATTTTTATCTTTTTTTGGAAGCTTTGGATGAAGC GTCAAATTCTGGTTTTATGTTTCTTGTGTTAGAGTGGGTATCCTTTTTAT TTTAGGTGTGTAATGGTGACAAAAATGTTGAACCTAACACTTCATACATA CCAAATCCCCTCACCACCAACCTAATCATAGTATTTAGAGGCAGTACTGA GTCATTATTTCTAGGTAGACACAATTGTTACTTTCTACATTTAAAATAGG TCGATTACCGGTGTGGATTCGCTAGAAATTTGGCATTCATAATAAGAACC CAGCTATTCATATAAGTGAGTAATTAAGCAAAACAATATAGTGATGACAG CTGTGCAGTATTTAGACATATCAAAGACATAAGAAACGACAAAGAGACTA ACGGAAAGTTTTGTAAAAAAATAATAAAACGAGGTAGAAAAAAGATAATT TAAACACCAAAGAGCTCTCCAATCTGTCAGTATCTTACTATAACCCAGTT TGGGGAAATTAAAATCACGGGCAGAATTGTCACGCGTTGAAATTGAGATA TTCCTTCATGCATATTTTGCTTATAGAATATATATTATTTTGAAGGTGCT CGTTAGAAACATTCCACCAGATCCTGACGAATCTGTTAGTGAGCTTGTGG AGCACTTCTTTCTGGTCAACCATTCGAATACCTATCTGACTCACCAGGTT GGTTCCTACTATATACACTATGCTACCAGAATATTGTGTTCATTAATCAT CTTGTTGATTTTGATATTTAAAATTTAAGAAACTTTGGGTGGTAAACATT TTGAAAGTTGTTATTTGTCAAATTAGTTCTGAGATAATATTAAACCTGTT GTTTGTCAAATTGATTCTGAGATAATGTTTATGAAACATGGAGTAGATTA TTAACTAGATCTAGTGCAACAGATTAATTTTGCCCATTTATTTGGGAAAG TAAAAAATAGTGTGTGACAGCATCTTTATTGCGACACTTGTATAGGTTGT TTATAATGCAAACCGGTTGGCAAAATTGGTTAAAAAGAAGAGCAAGATGC AGAATTGGCTCATCTATTATCAAAATAAGCTGGACAGAACTTCAATAAGA CCAGAAATGAAGGTATTTAAGTTTTAATCTCACGTGCATTCAAATGTTGG TATAATGATATTCAGATTTACCACAATCTTTCTTTTATATTTTACCAGAC TGGTTTCCTTGGTTGTTGTGGAACGAAAGTAGATTCTATTGATCATTACA CCACTGAAATTGACAAGCTGTCAAAAGAAGTAAGTACCATAATCTTTTTC TGTTATAAATTTCACCCCACACTGCATGCAGTTTTTTTTGTAATATAAGT TCATTATGCTAATAAAAAAAATTATTCCAACACAGTAATTAAATATAAAT TTTGCAGAATTAATGTCACAGACTATGATGATATGCTAAACTTTAACTAG TGTATCTAGTGTGTGCATTAATATTATTCTGCTTTTGACGAGTTATCTCA CTAACTAGCTGCTTTGCAACTGTTGATGTAATAAATAGTTTTCTGATGGG TCGCCTGAACTAAAACTGAAATTTGAAAGACTTCAAGAGATAGTGAAAGA ACTTGTTTACCATAATAAAATTTTAAATGGGATAACATATGCGGAAACTT TGGGCCTTATTGTTGTTTCATAATCATATTTGTTCTTTCAGAAATTTTCA TGATACTTACTGTGATTCAAGTTTATCACCTTTTGCAGATAGCTTTAGAG AGGGATAAGGTCACCAATGATCCCAAGTCTACCATGCCTGCTGCATTTGT TTCTTTTAAAAGTCGATGGGGTGCTGCAGTTTGTGCTCAAACCCAACAAA CCAGAAATCCAACACTTTGGTTGACTGAGTGGGCTCCAGAGCCACGGGAC GTCTATTGGCCAAACTTAGCGATTCCATATGTTTCCCTAACTGTTAGAAG GTTGATCGTAGCTGTTGCGTTCTTTTTTCTCACTTTCTTTTTCATGATCC CCATTGCAATAGTACAAGCTCTTGCGAGTCTTGACGGAATAGAGAAAGCA GCACCATGGTTGAAGCCGCTTGTTAGTGTGTAAGTCTAATCTCAAAATTG GATCTCTGGAGATATGATTATGTCCACATTACTCACTGGATTTTATTTAT TTGAATTAACTTCATTGTGCAGCCCTTTCATTAAGTCATTCATTCAGGGT TTTCTACCTGGTATTGCATTGAAGCTTTTTCTTATCTTCTTACCGTCAAT ATTGATGATGATGTCAAAATTTGAAGGCTTTGGATCTATATCTTCTCTTG AGAGAAGATCGGCTTCTAGATTCTACCTTTTTAGTTTTGTGAATATATTT CTTGGGAACATACTTACCGGGACAGCATTTCAACAGCTCGACTCTTTCAT TCACCAACCAGCCAATCAGTAAGTCATTCAATTTAAGACAGTAGCTTCTT CTTTCCTTTTCCTTTGATAATTATATTTTCATTTTTAATTGGCATTATAT TTCCTGTGTTTGGAGTGCATCCATTTGCTCTCCTGCACTGAAAAGTTTGC ATGGATATGAAACTTTTTGGTAATGTTGATTTTATCTGTGGTCAACTTAT TAGCTTATGTAAATTATACTAGTACATACATAAGGGATTTTTTCCACTAT TGGTTATGCTTTTTAGCTGTTTAAGAACCATGATGTTATTTTTGTTTACA GTTAAAGTTGTTAGACACTATGCTACAAGCATGTCTTATTTATACTGTGT TAGTATGATTAAGATTCCTTGTATATTATTCTCAGATATCCCATAACAAT TGGCACTGCAATTCCTTTAAAAGCAAGTTTCTTCATCACCTATATAATGG TTGATGGATGGTCCGGTATAGCTGCTGAGGTTTTGATGTTGAAACCACTA ATTATATATCACTTGAAGAACTTCTTCTTGGTTAAGACTGAAAAGGACAG GGAAGAGGCCATGGATCCTGGAAGTATAGGTTTCAACACTGGAGAACCCC GCATACAATTGTACTTTCTGCTGGGCCTAGTCTATGCTGCAGTGACACCT ACTGTTCTTCCTTTCATAATAATTTTCTTTGGGTTGGCATATGTTGTGTT CCGCCATCAGGTAATGAGATGCTTGAGTTATGCTGTGGCCTATTTGGGTC CCCTATTTGTGTTGCCATATACAAGATGAAAACTCTTAACTTCTAATTGC AGATAATCAATGTTTATAATCAAGAATACGAGAGTGGTGCTGCATTCTGG CCTGATGTCCATTTCCGTGTCATAATTGCACTGATAGTCTCACAGCTCGT TCTTATGGGACTCTTAACCACCAAAAGAGCTGCTTCATCAACTCCTTTTC TCATTGCACTCCCGGTACTGACGATATGGTTCCATATATACTGCAAAGGC CGTTTCGAATCTGCATTTTCTAAATATCCCTTACAGGTATGTCAACTAGT CATTTGGATGCTTGTTTCAAATTTGAAGAAGCTATGATGTGTTCATTGAT GGTGGAGTTTGTTGTTTCAGTTATCATCTGTTCGATTGTTAGATATCCCT AAAACCATTGAGCTATAACAATTTAAATGGCTAGAATTTACGACTGTACA CCTGATTGTTGAAACACAACTAATTCTTATGCTTGAATACATAACTTTAC CGCTGGCCAAATCTGCAACTCAGTTTCCTCTATCATGTAATTTTTATGTT GCTTTTGTAAATCTGTACACAGGAAGCAATGATGAAAGATACATTAGAAC GAGCTACAGACCCAAACCTGAACATAAAAGGTTACCTTCAACATGCTTAT ATTCATCCAGTTTTTAAGGCTAGCCTTGAGGATGCTGATGAGGAGGAAGA TGTAATGAGTCTAAAGTGGGAAACTGAGAGTGCTACTGTACCTACAAAAC GCCATTCACGAAGGAATACACCATTGCCCAGCAGAGTTAGCGGCGCATCG TCTCCATCTATGCTTGATGGCATTAAAAATGATCTAGAGTCATAGATCAT TCACGGACCAAGAAATGATGTCATATTATTGAAATGAGACAAACCAGGAC GTATGTGAATGTGAGTCTACATCAATGGACATGTGGTAGTGGTTGAAGCA TATAAGCTGAGAAAGTTGAGTGGTCGTGCAAAAGCATTTTGGACTTTCTG GTCAGCAGATGAAATATACCACAACATGCGGAGACTGTGAGGCAGAGATT TTTTTTCATTATGTTTCAGATTTTGTTAATAGTGAGTTTGTTCCCTTAGT AGATAGATAAACATGTTTTTCTATTTTTATCACCTAGCTTATAGAGATTT GCATAACATTACACTATGGATACTGTAAATTATCATCCTAAATTGATTAT GATTCTAGATTGTGTGTATAATTTTTCTCTTTTTTATAACATTTGAATTC AAGAGGTTTTCTGTTAAATATTATCCCCAAGTTACTTGTGTCAAAATACT CACACCTCACTCATTTGTTTGTGAACTTTAATCTATTTTATTCTCTATTG ACACTATTATTATGATAATTTGTTAAGCTCTTATTTTCCCTTGTTGAGTT GTGTTTACTATATTTTTGGTCCCCAACACTTCCACTAAAGAAAGCCTGAT GTGAAGGGATATCTGTTATTTTTCTGCCACATTTCTTTGTTGTGTTGGAT GTTGACACCTAAGTTTATTATGGATAATATTAACTTGTGCTTTTAAAAAT TAAATAAATTGGGTATTGAATTATCCATTTATTATCTTTTCTTTTTTTAA TTTTAGAATTAATTAAATTA
back to top

Coding sequence (CDS) from alignment at chr4LG4:5925247..5932116+

>Psat4g005520.4_Ps_Cameor_v1a ID=Psat4g005520.4_Ps_Cameor_v1a; Name=Psat4g005520.4; organism=Pisum sativum; type=CDS; length=2994bp; location=Sequence derived from: chr4LG4:5925247..5932116+ (Pisum sativum
ATGGCCTCACTGAAAGATATTGGGGTTGCAGCTGGGATTAATATTTTGAG
TGCATTTATCTTCTTTGTGGCATTTGCTATTTTGAGGCTTCAGCCATTGA
ATGATAGGGTATACTTTCCGAAATGGTATCTCAAGGGTTTAAGAACGGAT
CCTGTGCATGGAGGAGCCTTTGTGAGAAAGGTTGTTAATTTGGATTGGAG
ATCATATATTAGGTTTTTGAATTGGATGCCAGCTGCACTTAGAATGCCAG
AGCCTGAGCTTATTGATCATGCTGGATTGGATTCTGTTGTTTACTTGAGG
ATTTACTTGTTGGGATGGCCTCACTGAAAGATATTGGGGTTGCAGCTGGG
ATTAATATTTTGAGTGCATTTATCTTCTTTGTGGCATTTGCTATTTTGAG
GCTTCAGCCATTGAATGATAGGGTATACTTTCCGAAATGGTATCTCAAGG
GTTTAAGAACGGATCCTGTGCATGGAGGAGCCTTTGTGAGAAAGGTTGTT
AATTTGGATTGGAGATCATATATTAGGTTTTTGAATTGGATGCCAGCTGC
ACTTAGAATGCCAGAGCCTGAGCTTATTGATCATGCTGGATTGGATTCTG
TTGTTTACTTGAGGATTTACTTGTTGGGACTTAAAATCTTTGTTCCTATA
GCATTTCTGGCGTGGGCGATGCTGGTTCCTGTCAACTGGACAAGCACTGG
GCTAGAAATAGCTGGGGTAAAAAACATTACTTCCAGTGACATTGATAAGC
TCTCAATTTCAAATGTCCAGCGTGGATCCGAAAGACTTAAAATCTTTGTT
CCTATAGCATTTCTGGCGTGGGCGATGCTGGTTCCTGTCAACTGGACAAG
CACTGGGCTAGAAATAGCTGGGGTAAAAAACATTACTTCCAGTGACATTG
ATAAGCTCTCAATTTCAAATGTCCAGCGTGGATCCGAAAGGTTTTGGTCA
CATATAATAGCTGCTTATGCATTTACCTTCTGGACATGCTATATTTTGAT
GAAGGAGTATGGAAAAGTTGCCGCAATGAGATTGCAGTTTCTTGCAGCAG
AAAAACGTCGTCCTGATCAATTTTCGGTTTTGGTCACATATAATAGCTGC
TTATGCATTTACCTTCTGGACATGCTATATTTTGATGAAGGAGTATGGAA
AAGTTGCCGCAATGAGATTGCAGTTTCTTGCAGCAGAAAAACGTCGTCCT
GATCAATTTTCGGTGCTCGTTAGAAACATTCCACCAGATCCTGACGAATC
TGTTAGTGAGCTTGTGGAGCACTTCTTTCTGGTCAACCATTCGAATACCT
ATCTGACTCACCAGGTGCTCGTTAGAAACATTCCACCAGATCCTGACGAA
TCTGTTAGTGAGCTTGTGGAGCACTTCTTTCTGGTCAACCATTCGAATAC
CTATCTGACTCACCAGGTTGTTTATAATGCAAACCGGTTGGCAAAATTGG
TTAAAAAGAAGAGCAAGATGCAGAATTGGCTCATCTATTATCAAAATAAG
CTGGACAGAACTTCAATAAGACCAGAAATGAAGGTTGTTTATAATGCAAA
CCGGTTGGCAAAATTGGTTAAAAAGAAGAGCAAGATGCAGAATTGGCTCA
TCTATTATCAAAATAAGCTGGACAGAACTTCAATAAGACCAGAAATGAAG
ACTGGTTTCCTTGGTTGTTGTGGAACGAAAGTAGATTCTATTGATCATTA
CACCACTGAAATTGACAAGCTGTCAAAAGAAACTGGTTTCCTTGGTTGTT
GTGGAACGAAAGTAGATTCTATTGATCATTACACCACTGAAATTGACAAG
CTGTCAAAAGAAATAGCTTTAGAGAGGGATAAGGTCACCAATGATCCCAA
GTCTACCATGCCTGCTGCATTTGTTTCTTTTAAAAGTCGATGGGGTGCTG
CAGTTTGTGCTCAAACCCAACAAACCAGAAATCCAACACTTTGGTTGACT
GAGTGGGCTCCAGAGCCACGGGACGTCTATTGGCCAAACTTAGCGATTCC
ATATGTTTCCCTAACTGTTAGAAGGTTGATCGTAGCTGTTGCGTTCTTTT
TTCTCACTTTCTTTTTCATGATCCCCATTGCAATAGTACAAGCTCTTGCG
AGTCTTGACGGAATAGAGAAAGCAGCACCATGGTTGAAGCCGCTTGTTAG
TGTATAGCTTTAGAGAGGGATAAGGTCACCAATGATCCCAAGTCTACCAT
GCCTGCTGCATTTGTTTCTTTTAAAAGTCGATGGGGTGCTGCAGTTTGTG
CTCAAACCCAACAAACCAGAAATCCAACACTTTGGTTGACTGAGTGGGCT
CCAGAGCCACGGGACGTCTATTGGCCAAACTTAGCGATTCCATATGTTTC
CCTAACTGTTAGAAGGTTGATCGTAGCTGTTGCGTTCTTTTTTCTCACTT
TCTTTTTCATGATCCCCATTGCAATAGTACAAGCTCTTGCGAGTCTTGAC
GGAATAGAGAAAGCAGCACCATGGTTGAAGCCGCTTGTTAGTGTCCCTTT
CATTAAGTCATTCATTCAGGGTTTTCTACCTGGTATTGCATTGAAGCTTT
TTCTTATCTTCTTACCGTCAATATTGATGATGATGTCAAAATTTGAAGGC
TTTGGATCTATATCTTCTCTTGAGAGAAGATCGGCTTCTAGATTCTACCT
TTTTAGTTTTGTGAATATATTTCTTGGGAACATACTTACCGGGACAGCAT
TTCAACAGCTCGACTCTTTCATTCACCAACCAGCCAATCAGTAACCCTTT
CATTAAGTCATTCATTCAGGGTTTTCTACCTGGTATTGCATTGAAGCTTT
TTCTTATCTTCTTACCGTCAATATTGATGATGATGTCAAAATTTGAAGGC
TTTGGATCTATATCTTCTCTTGAGAGAAGATCGGCTTCTAGATTCTACCT
TTTTAGTTTTGTGAATATATTTCTTGGGAACATACTTACCGGGACAGCAT
TTCAACAGCTCGACTCTTTCATTCACCAACCAGCCAATCAGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR027815CSC1/OSCA1-like_cyt
IPR003864CSC1/OSCA1-like_7TM
IPR032880Csc1/OSCA1-like_N
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane