Psat4g005520.4
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Psat4g005520.4 vs. DB:Swiss
Match: CSC1_ARATH (Calcium permeable stress-gated cation channel 1 OS=Arabidopsis thaliana OX=3702 GN=CSC1 PE=2 SV=1) HSP 1 Score: 747.273 bits (1928), Expect = 0.000e+0 Identity = 366/500 (73.20%), Postives = 431/500 (86.20%), Query Frame = 1 Query: 1 MASLKDIGVAAGINILSAFIFFVAFAILRLQPLNDRVYFPKWYLKGLRTDPVHGGAFVRKVVNLDWRSYIRFLNWMPAALRMPEPELIDHAGLDSVVYLRIYLLGLKIFVPIAFLAWAMLVPVNWTSTGLEIAG-VKNITSSDIDKLSISNVQRGSERFWSHIIAAYAFTFWTCYILMKEYGKVAAMRLQFLAAEKRRPDQFSVLVRNIPPDPDESVSELVEHFFLVNHSNTYLTHQVVYNANRLAKLVKKKSKMQNWLIYYQNKLDRT-SIRPEMKTGFLGCCGTKVDSIDHYTTEIDKLSKEIALERDKVTNDPKSTMPAAFVSFKSRWGAAVCAQTQQTRNPTLWLTEWAPEPRDVYWPNLAIPYVSLTVRRLIVAVAXXXXXXXXMIPIAIVQALASLDGIEKAAPWLKPLVSVPFIKSFIQGFLPGIALKLFLIFLPSILMMMSKFEGFGSISSLERRSASRFYLFSFVNIFLGNILTGTAFQQLDSFIHQPANQ 1494 MA+L+DIGV+AGINILSAF+FF+ FA+LRLQP NDRVYF KWYLKGLR+ P GGAF ++ VNLD+RSY++FLNWMP AL+MPEPELIDHAGLDSVVYLRIY LGLKIF PIA LAWA+LVPVNWT+ LE+A ++N+TSSDIDKLS+SN+ S RFW+HI+ AYAFT WTCY+LMKEY +A MRLQF+A+E RRPDQF+VLVRN+PPD DESVSELVEHFFLVNH + YLTHQVV NAN+LA LVKKK K+QNWL YYQ K R S R +K GFLG G KVD+I+HY EIDK+SKEI+ ER++V NDPK+ MPAAFVSFK+RW AAVCAQTQQTRNPT WLTEWAPEPRDV+W NLAIPYVSLTVRRLI+ VAFFFLTFFF++PIA VQ+LA+++GI KAAP+LK +V F+KS IQGFLPGIALKLFL FLPSILM+MSKFEGF SISSLERR+A R+Y+F+ VN+FL +++ G AF+QL+SF++Q ANQ Sbjct: 1 MATLQDIGVSAGINILSAFVFFIIFAVLRLQPFNDRVYFSKWYLKGLRSSPARGGAFAQRFVNLDFRSYMKFLNWMPEALKMPEPELIDHAGLDSVVYLRIYWLGLKIFTPIAVLAWAVLVPVNWTNNTLEMAKQLRNVTSSDIDKLSVSNIPEYSMRFWTHIVMAYAFTIWTCYVLMKEYETIANMRLQFVASEARRPDQFTVLVRNVPPDADESVSELVEHFFLVNHPDHYLTHQVVCNANKLADLVKKKKKLQNWLDYYQLKYARNNSQRIMVKLGFLGLWGQKVDAIEHYIAEIDKISKEISKEREEVVNDPKAIMPAAFVSFKTRWAAAVCAQTQQTRNPTQWLTEWAPEPRDVFWSNLAIPYVSLTVRRLIMHVAFFFLTFFFIVPIAFVQSLATIEGIVKAAPFLKFIVDDKFMKSVIQGFLPGIALKLFLAFLPSILMIMSKFEGFTSISSLERRAAFRYYIFNLVNVFLASVIAGAAFEQLNSFLNQSANQ 500
BLAST of Psat4g005520.4 vs. DB:Swiss
Match: CSCL7_ARATH (CSC1-like protein At1g11960 OS=Arabidopsis thaliana OX=3702 GN=At1g11960 PE=2 SV=1) HSP 1 Score: 735.717 bits (1898), Expect = 0.000e+0 Identity = 355/499 (71.14%), Postives = 424/499 (84.97%), Query Frame = 1 Query: 1 MASLKDIGVAAGINILSAFIFFVAFAILRLQPLNDRVYFPKWYLKGLRTDPVHGGAFVRKVVNLDWRSYIRFLNWMPAALRMPEPELIDHAGLDSVVYLRIYLLGLKIFVPIAFLAWAMLVPVNWTSTGLEIAGVKNITSSDIDKLSISNVQRGSERFWSHIIAAYAFTFWTCYILMKEYGKVAAMRLQFLAAEKRRPDQFSVLVRNIPPDPDESVSELVEHFFLVNHSNTYLTHQVVYNANRLAKLVKKKSKMQNWLIYYQNKLDRT-SIRPEMKTGFLGCCGTKVDSIDHYTTEIDKLSKEIALERDKVTNDPKSTMPAAFVSFKSRWGAAVCAQTQQTRNPTLWLTEWAPEPRDVYWPNLAIPYVSLTVRRLIVAVAXXXXXXXXMIPIAIVQALASLDGIEKAAPWLKPLVSVPFIKSFIQGFLPGIALKLFLIFLPSILMMMSKFEGFGSISSLERRSASRFYLFSFVNIFLGNILTGTAFQQLDSFIHQPANQ 1494 MA+L DIGVAA INIL+A IF +AFAILR+QP NDRVYFPKWYLKG+R+ P+H GA V K VN++ SY+RFLNWMPAAL+MPEPELIDHAGLDS VYLRIYL+GLKIFVPIA LAW++LVPVNWTS GL++A ++N+TSSDIDKLSISN++ GS+RFW+H++ AYAFTFWTCY+LMKEY KVAAMRL FL E+RRPDQF+VLVRN+P DPDES+S+ VEHFFLVNH + YLTHQVVYNAN LA LV++K QNWL YYQ K R +P +KTGFLG G KVD+IDHY EI+KL+++I ER KV D S MPAAFVSFK+RWGAAV AQTQQ+ +PT WLTEWAPE R+V+W NLAIPYVSLTVRRLI+ +AFFFLTFFFMIPIA VQ+LAS++GIEK AP+LK ++ KS IQGFLPGI LKLFLIFLPSILM+MSKFEGF S+SSLERR+A R+Y+F+ +N+FLG+++TG+AF+QLDSF+ Q A + Sbjct: 1 MATLGDIGVAAAINILTAIIFLLAFAILRIQPFNDRVYFPKWYLKGIRSSPLHSGALVSKFVNVNLGSYLRFLNWMPAALKMPEPELIDHAGLDSAVYLRIYLIGLKIFVPIALLAWSILVPVNWTSHGLQLAKLRNVTSSDIDKLSISNIENGSDRFWTHLVMAYAFTFWTCYVLMKEYEKVAAMRLAFLQNEQRRPDQFTVLVRNVPADPDESISDSVEHFFLVNHPDHYLTHQVVYNANDLAALVEQKKSTQNWLDYYQLKYTRNQEHKPRIKTGFLGLWGKKVDAIDHYIAEIEKLNEQIMEERKKVKKDDTSVMPAAFVSFKTRWGAAVSAQTQQSSDPTEWLTEWAPEAREVFWSNLAIPYVSLTVRRLIMHIAFFFLTFFFMIPIAFVQSLASIEGIEKNAPFLKSIIENDLFKSVIQGFLPGIVLKLFLIFLPSILMVMSKFEGFVSLSSLERRAAFRYYIFNLINVFLGSVITGSAFEQLDSFLKQSAKE 499
BLAST of Psat4g005520.4 vs. DB:Swiss
Match: CSCL6_ARATH (CSC1-like protein At1g62320 OS=Arabidopsis thaliana OX=3702 GN=At1g62320 PE=3 SV=2) HSP 1 Score: 726.472 bits (1874), Expect = 0.000e+0 Identity = 359/498 (72.09%), Postives = 432/498 (86.75%), Query Frame = 1 Query: 1 MASLKDIGVAAGINILSAFIFFVAFAILRLQPLNDRVYFPKWYLKGLRTDPVHGGAFVRKVVNLDWRSYIRFLNWMPAALRMPEPELIDHAGLDSVVYLRIYLLGLKIFVPIAFLAWAMLVPVNWTSTGLEIAGVKNITSSDIDKLSISNVQRGSERFWSHIIAAYAFTFWTCYILMKEYGKVAAMRLQFLAAEKRRPDQFSVLVRNIPPDPDESVSELVEHFFLVNHSNTYLTHQVVYNANRLAKLVKKKSKMQNWLIYYQNKLDRT-SIRPEMKTGFLGCCGTKVDSIDHYTTEIDKLSKEIALERDKVTNDPKSTMPAAFVSFKSRWGAAVCAQTQQTRNPTLWLTEWAPEPRDVYWPNLAIPYVSLTVRRLIVAVAXXXXXXXXMIPIAIVQALASLDGIEKAAPWLKPLVSVPFIKSFIQGFLPGIALKLFLIFLPSILMMMSKFEGFGSISSLERRSASRFYLFSFVNIFLGNILTGTAFQQLDSFIHQPAN 1491 MA+L DIG+AA INILSA IF + FAILR+QP NDRVYFPKWYLKG+R+ PV+ GAFV K++NLD+RSY+RFLNWMP AL+MPEPELIDHAGLDS VYLRIYL+GLKIF PIA L+W++LVPVNWTS GL++A ++N+TSS+IDKLSISNV+RGS+RFW+H++ AYAFTFWTCY+LMKEY K+AAMRL FL +EKRR DQF+VLVRN+PPD DES+SE V+HFFLVNH + YLTHQVVYNAN LAKLV+ K KMQNWL YYQ K R RP +K GFLG G KVD++DHYT EI+KLS++I ER ++ D KS M AAFVSFK+RWGAAVCAQTQQT+NPT WLTEWAPE R++YWPNLA+PYVSLTVRR ++ +AFFFLTFFF+IPIA VQ+LAS++GIEK+AP+L P+V +KS IQGFLPGI LKLFLIFLP+ILM+MSKFEGF SISSLERR+A R+Y+F+ VN+FLG+++TG+AF+QLDSF+ Q AN Sbjct: 1 MATLADIGLAAAINILSALIFLLLFAILRIQPFNDRVYFPKWYLKGVRSSPVNSGAFVSKIMNLDFRSYVRFLNWMPDALKMPEPELIDHAGLDSAVYLRIYLIGLKIFGPIALLSWSILVPVNWTSDGLQLAKLRNVTSSNIDKLSISNVERGSDRFWAHLVMAYAFTFWTCYVLMKEYEKIAAMRLSFLQSEKRRADQFTVLVRNVPPDSDESISENVQHFFLVNHPDHYLTHQVVYNANELAKLVEDKKKMQNWLDYYQLKYTRNKEQRPRVKMGFLGLWGKKVDAMDHYTAEIEKLSEQIMEERKRIKKDDKSVMQAAFVSFKTRWGAAVCAQTQQTKNPTEWLTEWAPEAREMYWPNLAMPYVSLTVRRFVMHIAFFFLTFFFIIPIAFVQSLASIEGIEKSAPFLSPIVKNKLMKSLIQGFLPGIVLKLFLIFLPTILMIMSKFEGFISISSLERRAAFRYYIFNLVNVFLGSVITGSAFEQLDSFLKQSAN 498
BLAST of Psat4g005520.4 vs. DB:Swiss
Match: CSCL5_ARATH (Protein OSCA1 OS=Arabidopsis thaliana OX=3702 GN=OSCA1 PE=1 SV=1) HSP 1 Score: 725.702 bits (1872), Expect = 0.000e+0 Identity = 363/501 (72.46%), Postives = 422/501 (84.23%), Query Frame = 1 Query: 1 MASLKDIGVAAGINILSAFIFFVAFAILRLQPLNDRVYFPKWYLKGLRTDPVHGGAFVRKVVNLDWRSYIRFLNWMPAALRMPEPELIDHAGLDSVVYLRIYLLGLKIFVPIAFLAWAMLVPVNWTSTGLEIAG-VKNITSSDIDKLSISNVQRGSERFWSHIIAAYAFTFWTCYILMKEYGKVAAMRLQFLAAEKRRPDQFSVLVRNIPPDPDESVSELVEHFFLVNHSNTYLTHQVVYNANRLAKLVKKKSKMQNWLIYYQNKLDR--TSIRPEMKTGFLGCCGTKVDSIDHYTTEIDKLSKEIALERDKVTNDPKSTMPAAFVSFKSRWGAAVCAQTQQTRNPTLWLTEWAPEPRDVYWPNLAIPYVSLTVRRLIVAVAXXXXXXXXMIPIAIVQALASLDGIEKAAPWLKPLVSVPFIKSFIQGFLPGIALKLFLIFLPSILMMMSKFEGFGSISSLERRSASRFYLFSFVNIFLGNILTGTAFQQLDSFIHQPANQ 1494 MA+LKDIGV+AGINIL+AFIFF+ FA LRLQP NDRVYF KWYL+GLR+ P GG F + VNL+ RSY++FL+WMP AL+MPE ELIDHAGLDSVVYLRIY LGLKIF PIA LAWA+LVPVNWT+ LE+A KN+TSSDIDKL+ISN+ GS RFW+HII AYAFT WTCY+LMKEY VA MRLQFLA+E RRPDQF+VLVRN+PPDPDE+VSELVEHFFLVNH + YLTHQVV NAN+LA LV KK+K+QNWL YYQ K R + IRP K G LG CG KVD+I+HY E+DK SKEIA ER+ V ND KS MPA+FVSFK+RW AAVCAQT QTRNPT WLTEWA EPRD+YWPNLAIPYVSLTVRRL++ VAFFFLTFFF+IPIA VQ+LA+++GIEK AP+LK ++ FIKS IQG L GIALKLFLIFLP+ILM MSKFEGF S+S LERRSASR+Y+F+ VN+FLG+++ G AF+QL+SF++Q NQ Sbjct: 1 MATLKDIGVSAGINILTAFIFFIIFAFLRLQPFNDRVYFSKWYLRGLRSSPASGGGFAGRFVNLELRSYLKFLHWMPEALKMPERELIDHAGLDSVVYLRIYWLGLKIFAPIAMLAWAVLVPVNWTNNELELAKHFKNVTSSDIDKLTISNIPEGSNRFWAHIIMAYAFTIWTCYMLMKEYETVANMRLQFLASEGRRPDQFTVLVRNVPPDPDETVSELVEHFFLVNHPDNYLTHQVVCNANKLADLVSKKTKLQNWLDYYQLKYTRNNSQIRPITKLGCLGLCGQKVDAIEHYIAEVDKTSKEIAEERENVVNDQKSVMPASFVSFKTRWAAAVCAQTTQTRNPTEWLTEWAAEPRDIYWPNLAIPYVSLTVRRLVMNVAFFFLTFFFIIPIAFVQSLATIEGIEKVAPFLKVIIEKDFIKSLIQGLLAGIALKLFLIFLPAILMTMSKFEGFTSVSFLERRSASRYYIFNLVNVFLGSVIAGAAFEQLNSFLNQSPNQ 501
BLAST of Psat4g005520.4 vs. DB:Swiss
Match: CSCL4_ARATH (CSC1-like protein At3g21620 OS=Arabidopsis thaliana OX=3702 GN=At3g21620 PE=2 SV=1) HSP 1 Score: 711.835 bits (1836), Expect = 0.000e+0 Identity = 353/499 (70.74%), Postives = 423/499 (84.77%), Query Frame = 1 Query: 1 MASLKDIGVAAGINILSAFIFFVAFAILRLQPLNDRVYFPKWYLKGLRTDPVHGGAFVRKVVNLDWRSYIRFLNWMPAALRMPEPELIDHAGLDSVVYLRIYLLGLKIFVPIAFLAWAMLVPVNWTSTGLEIAGVKNITSSDIDKLSISNVQRGSERFWSHIIAAYAFTFWTCYILMKEYGKVAAMRLQFLAAEKRRPDQFSVLVRNIPPDPDESVSELVEHFFLVNHSNTYLTHQVVYNANRLAKLVKKKSKMQNWLIYYQNKLDRT-SIRPEMKTGFLGCCGTKVDSIDHYTTEIDKLSKEIALERDKVTNDPKSTMPAAFVSFKSRWGAAVCAQTQQTRNPTLWLTEWAPEPRDVYWPNLAIPYVSLTVRRLIVAVAXXXXXXXXMIPIAIVQALASLDGIEKAAPWLKPLVSVPFIKSFIQGFLPGIALKLFLIFLPSILMMMSKFEGFGSISSLERRSASRFYLFSFVNIFLGNILTGTAFQQLDSFIHQPANQ 1494 MA+L DIGVAA INIL+AF FF+AFAILRLQP+NDRVYFPKWYLKGLR+ P+ G F K VNLD+RSYIRFLNWMP ALRMPEPELIDHAGLDSVVYLRIYLLGLKIF PIA +A+ ++VPVNWT++ L+ +KN+T SDIDKLSISN+ GS RFW H+ AY TFWTC++L +EY +A+MRLQFLA+E RRPDQF+VLVRNIPPDPDESVSELVEHFF VNH + YLT+Q VYNAN+L++LV+K+ K+QNWL YYQNK R S RP +K GFLGC G +VD+IDHY +I+ L+++I+ E++ V + KS +PAAFVSFK RWGA VC+QTQQ+RNPT WLTEWAPEPRD+YW NLA+PYV LT+RRL++AVAFFFLTFFFMIPIA VQ LA+++GIEKA P+LKPL+ V +KSFIQGFLPGIALK+FLI LPSILM+MSKFEGF S SSLERR ASR+Y+F F+N+FL +I+ GTA QQLDSF++Q A + Sbjct: 1 MATLTDIGVAATINILTAFAFFIAFAILRLQPVNDRVYFPKWYLKGLRSSPIKTGGFASKFVNLDFRSYIRFLNWMPQALRMPEPELIDHAGLDSVVYLRIYLLGLKIFFPIACIAFTVMVPVNWTNSTLD--QLKNLTFSDIDKLSISNIPTGSSRFWVHLCMAYVITFWTCFVLQREYKHIASMRLQFLASEHRRPDQFTVLVRNIPPDPDESVSELVEHFFKVNHPDYYLTYQAVYNANKLSELVQKRMKLQNWLDYYQNKHSRNPSKRPLIKIGFLGCWGEEVDAIDHYIEKIEGLTRKISEEKETVMSSTKSLVPAAFVSFKKRWGAVVCSQTQQSRNPTEWLTEWAPEPRDIYWDNLALPYVQLTIRRLVIAVAFFFLTFFFMIPIAFVQTLANIEGIEKAVPFLKPLIEVKTVKSFIQGFLPGIALKIFLIVLPSILMLMSKFEGFISKSSLERRCASRYYMFQFINVFLCSIIAGTALQQLDSFLNQSATE 497
BLAST of Psat4g005520.4 vs. DB:Swiss
Match: CSCL3_ARATH (CSC1-like protein At4g15430 OS=Arabidopsis thaliana OX=3702 GN=At4g15430 PE=2 SV=1) HSP 1 Score: 685.256 bits (1767), Expect = 0.000e+0 Identity = 332/498 (66.67%), Postives = 407/498 (81.73%), Query Frame = 1 Query: 1 MASLKDIGVAAGINILSAFIFFVAFAILRLQPLNDRVYFPKWYLKGLRTDPVHGGAFVRKVVNLDWRSYIRFLNWMPAALRMPEPELIDHAGLDSVVYLRIYLLGLKIFVPIAFLAWAMLVPVNWTSTGLEIAGVKNITSSDIDKLSISNVQRGSERFWSHIIAAYAFTFWTCYILMKEYGKVAAMRLQFLAAEKRRPDQFSVLVRNIPPDPDESVSELVEHFFLVNHSNTYLTHQVVYNANRLAKLVKKKSKMQNWLIYYQNKLDRT-SIRPEMKTGFLGCCGTKVDSIDHYTTEIDKLSKEIALERDKVTNDPKSTMPAAFVSFKSRWGAAVCAQTQQTRNPTLWLTEWAPEPRDVYWPNLAIPYVSLTVRRLIVAVAXXXXXXXXMIPIAIVQALASLDGIEKAAPWLKPLVSVPFIKSFIQGFLPGIALKLFLIFLPSILMMMSKFEGFGSISSLERRSASRFYLFSFVNIFLGNILTGTAFQQLDSFIHQPAN 1491 MA++ DIGVAA INI++AF F +AFAI R+QP+NDRVYFPKWYLKGLR+ + G F K +NLD+RSYIRFLNWMP AL+MPEPEL+DHAGLDSVVYLRIYLLGLKIF PIA +A+ +VPVNWT+ GL+ NI+ SDIDKLS+SN+ GS RFW H+ AYA TFWTC+IL +EY +A MRLQFLA ++RRP+QF+VLVRNIP DP ES+ ELVEHFF VNH + YLT Q V++A +L++LV + +MQN L Y NK R S RP +K GFLGCCG + D I +YT+ ++ L++EI+ E+ ++ KS +PAAFVSFKSRWGAAVCAQTQQTRNPT WLTEWA EPRD+Y+ NLA+PYV L +RRLIV VA+FFLTFFFMIPIA VQ+LA+++GIEKA P+LKPL+ V +KS IQGFLPGIALK+FL+FLP ILM MSKFEGF S SSLERR+A+RFY+F F+N+FLG+I+TGTAFQQL+SF++Q AN Sbjct: 1 MATINDIGVAAAINIVTAFAFLLAFAIFRIQPVNDRVYFPKWYLKGLRSSSIQTGGFGSKFINLDFRSYIRFLNWMPEALKMPEPELVDHAGLDSVVYLRIYLLGLKIFFPIACVAFTTMVPVNWTNKGLDRLRHSNISFSDIDKLSLSNIPNGSPRFWVHLCMAYAITFWTCFILKREYQNIALMRLQFLANDQRRPNQFTVLVRNIPADPHESICELVEHFFKVNHPDHYLTFQAVHDATKLSELVLTRKQMQNLLDYNINKHMRNLSNRPVIKMGFLGCCGEEADGIKYYTSVVEGLTREISEEKQRLRTGTKSIVPAAFVSFKSRWGAAVCAQTQQTRNPTEWLTEWAAEPRDIYYDNLALPYVDLKIRRLIVGVAYFFLTFFFMIPIAFVQSLANIEGIEKAFPFLKPLIEVKLLKSIIQGFLPGIALKIFLLFLPRILMQMSKFEGFVSTSSLERRAATRFYMFQFINVFLGSIVTGTAFQQLNSFLNQSAN 498
BLAST of Psat4g005520.4 vs. DB:Swiss
Match: CSCL2_ARATH (CSC1-like protein At4g02900 OS=Arabidopsis thaliana OX=3702 GN=At4g02900 PE=3 SV=1) HSP 1 Score: 660.988 bits (1704), Expect = 0.000e+0 Identity = 326/499 (65.33%), Postives = 401/499 (80.36%), Query Frame = 1 Query: 1 MASLKDIGVAAGINILSAFIFFVAFAILRLQPLNDRVYFPKWYLKGLRTDPVHGGAFVRKVVNLDWRSYIRFLNWMPAALRMPEPELIDHAGLDSVVYLRIYLLGLKIFVPIAFLAWAMLVPVNWTSTGLEIAGVKNITSSDIDKLSISNVQRGSERFWSHIIAAYAFTFWTCYILMKEYGKVAAMRLQFLAAEKRRPDQFSVLVRNIPPDPDESVSELVEHFFLVNHSNTYLTHQVVYNANRLAKLVKKKSKMQNWLIYYQNKLDRT-SIRPEMKTGFLGCCGTKVDSIDHYTTEIDKLSKEIALERDKVTNDPKSTMPAAFVSFKSRWGAAVCAQTQQTRNPTLWLTEWAPEPRDVYWPNLAIPYVSLTVRRLIVAVAXXXXXXXXMIPIAIVQALASLDGIEKAAPWLKPLVSVPFIKSFIQGFLPGIALKLFLIFLPSILMMMSKFEGFGSISSLERRSASRFYLFSFVNIFLGNILTGTAFQQLDSFIHQPANQ 1494 MAS++DIG++A IN+LSAF F AFA+LRLQP+NDRVYFPKWYLKG+R P + + VNLDW +Y++FLNWMPAAL+MPEPELI+HAGLDS VY+RIYLLGLK+FVPI LA+ +LVPVNWT LE + ++T S++DKLSISNV GS RFW+HI Y TFWTCYIL EY VA MRL+ LAAE RRPDQ +VLVRN+PPDPDESV+E VEHFF VNH + YL HQVVYNAN LAKLV ++ MQNWL YY+NK +R S RP KTG+ G GT VD+ID YT+++D L+++ A+ER+K+ NDPK+ MPAAFVSF+SRWG AVCAQTQQ NPT+WLTEWAPEPRDV+W NLAIPYV L++RRL+ VA FFL F FMIPIA VQ+LA+L+GI+K P+LKP++ + +KS IQGFLPGIALK+FLI LP+ILM MS+ EG+ S+S L+RRSA +++ F VN+FLG+I+TGTAFQQL SF+ QP + Sbjct: 1 MASVQDIGLSAAINLLSAFAFLFAFAMLRLQPVNDRVYFPKWYLKGIRGSPTRSRGIMTRFVNLDWTTYVKFLNWMPAALQMPEPELIEHAGLDSAVYIRIYLLGLKMFVPITLLAFGVLVPVNWTGETLE--NIDDLTFSNVDKLSISNVPPGSPRFWAHITMTYVITFWTCYILYMEYKAVANMRLRHLAAESRRPDQLTVLVRNVPPDPDESVNEHVEHFFCVNHPDHYLCHQVVYNANDLAKLVAQRKAMQNWLTYYENKFERKPSSRPTTKTGYGGFWGTTVDAIDFYTSKMDILAEQEAVEREKIMNDPKAIMPAAFVSFRSRWGTAVCAQTQQCHNPTIWLTEWAPEPRDVFWDNLAIPYVELSIRRLLTTVALFFLIFCFMIPIAFVQSLANLEGIQKVLPFLKPVIEMKTVKSVIQGFLPGIALKIFLIILPTILMTMSQIEGYTSLSYLDRRSAEKYFWFIIVNVFLGSIITGTAFQQLKSFLEQPPTE 497
BLAST of Psat4g005520.4 vs. DB:Swiss
Match: CSCL1_ARATH (CSC1-like protein At1g32090 OS=Arabidopsis thaliana OX=3702 GN=At1g32090 PE=1 SV=1) HSP 1 Score: 573.933 bits (1478), Expect = 0.000e+0 Identity = 279/500 (55.80%), Postives = 373/500 (74.60%), Query Frame = 1 Query: 1 MASLKDIGVAAGINILSAFIFFVAFAILRLQPLNDRVYFPKWYLKGLRTDPVHGG-AFVRKVVNLDWRSYIRFLNWMPAALRMPEPELIDHAGLDSVVYLRIYLLGLKIFVPIAFLAWAMLVPVNWTSTGLEIAGVKNITSSDIDKLSISNVQRGSERFWSHIIAAYAFTFWTCYILMKEYGKVAAMRLQFLAAEKRRPDQFSVLVRNIPPDPDESVSELVEHFFLVNHSNTYLTHQVVYNANRLAKLVKKKSKMQNWLIYYQNKLDRTSIR-PEMKTGFLGCCGTKVDSIDHYTTEIDKLSKEIALERDKVTNDPKSTMPAAFVSFKSRWGAAVCAQTQQTRNPTLWLTEWAPEPRDVYWPNLAIPYVSLTVRRLIVAVAXXXXXXXXMIPIAIVQALASLDGIEKAAPWLKPLVSVPFIKSFIQGFLPGIALKLFLIFLPSILMMMSKFEGFGSISSLERRSASRFYLFSFVNIFLGNILTGTAFQQLDSFIHQPANQ 1494 MA+L+DIGV+A IN+ AF+F +AFA+LR+QP+NDRVYFPKWYL G R P V K VNL++++Y FLNWMP A++M E E+I HAGLDS ++LRIY LGLKIF P+ LA +LV S+G K + S+IDKLSISNVQ S +F+ HI Y FTFW C++L +EY VA MRLQ+LA+++RRP+QF+V+VRN+P P SV + V+ FF NH YL HQ VYNAN AKLVK+++K+Q W YY K R + P +TGFLG G +VDSI++Y +I + ++LER KV D K +P AFVSF SRWGAAVCAQTQQ++NPTLWLT APEPRD+YW NLAIP++SLT+R+L++ V+ F L FF+MIPIA VQ+LA+L+G+++ AP+L+P+ + FIKSF+QGFLPG+ALK+FL LP++L++MSK EG+ ++S+LERR+A+++Y F VN+FLG+I+ GTAF+QL SF+HQ +Q Sbjct: 1 MATLQDIGVSALINLFGAFLFLIAFAVLRIQPINDRVYFPKWYLTGERNSPRRSDRTLVGKFVNLNYKTYFTFLNWMPQAMKMSESEIIRHAGLDSAIFLRIYTLGLKIFAPVMVLALVVLV-PVNVSSGTLFFLKKELVVSNIDKLSISNVQPKSSKFFFHIAVEYIFTFWACFMLYREYNNVAIMRLQYLASQRRRPEQFTVVVRNVPDMPGHSVPDTVDQFFKTNHPEHYLCHQAVYNANTYAKLVKQRAKLQRWFDYYVLKHQRNPHKQPTCRTGFLGLWGKRVDSIEYYKQQIKEFDHNMSLERQKVLKDSKLMLPVAFVSFDSRWGAAVCAQTQQSKNPTLWLTSSAPEPRDIYWQNLAIPFISLTIRKLVIGVSVFALVFFYMIPIAFVQSLANLEGLDRVAPFLRPVTRLDFIKSFLQGFLPGLALKIFLWILPTVLLIMSKIEGYIALSTLERRAAAKYYYFMLVNVFLGSIIAGTAFEQLHSFLHQSPSQ 499
BLAST of Psat4g005520.4 vs. DB:Swiss
Match: CSCLC_ARATH (CSC1-like protein HYP1 OS=Arabidopsis thaliana OX=3702 GN=HYP1 PE=2 SV=1) HSP 1 Score: 277.715 bits (709), Expect = 3.282e-84 Identity = 158/484 (32.64%), Postives = 269/484 (55.58%), Query Frame = 1 Query: 28 AAGINILSAFIFFVAFAILRLQPLNDRVYFPKWYLKGLRTDPVHGGAFVRKVVNLDWRSYIRFLNWMPAALRMPEPELIDHAGLDSVVYLRIYLLGLKIFVPIAFLAWAMLVPVNWTSTGLEIAGVKNITSSDIDKLSISNVQRGSERFWSHIIAAYAFTFWTCYILMKEYGKVAAMRLQFLAAEKRRPDQFSVLVRNIPPDPDESVSELVEHFFLVNHSNTYLTHQVVYNANRLAKLVKKKSKMQNWLIYYQNKLDRTSIRPEMKTGFLGCCGTKVDSIDHYTTEIDKLSKEIALERDKVTNDPKSTMPAAFVSFKSRWGAAVCAQTQQTRNPTLWLTEWAPEPRDVYWPNLAIPYVSLTVRRLIVAVAXXXXXXXXMIPIAIVQALASLDGIEKAAPWLKPLVSVPFIKSFIQGFLPGIALKLFLIFLPSILMMMSKFEGFGSISSLERRSASRFYLFSFVNIFLGNILTGTAFQQLDSFIH 1479 + GIN+ F+FF ++ILR QP N VY P+ K ++ ++ + + W+ AL E++ + GLD++V++R+++ +++F + + +L+PVN+ G E ++ +D SISNV GS + W H A Y FT C +L E+ + R+ L + K +P +F+VLV +P S+SE VE+FF HS++YL+H VV+ ++L L+ K+ L + K S + GFLG G VD +DHY ++DKL ++ L++ + + +PAAFVSF++R GAA+ QQ +PT WLTE APEP DV+WP +V + ++V VAF L +++P+ +VQ LA+L +E P+LK ++++ + I G+LP + +LFL+ +P I++++S +GF S S +E+ + + +F+ N F N+L+G+A +++ F+ Sbjct: 9 SVGINLGLCFLFFTLYSILRKQPSNVTVYGPRLVKKDGKS---------QQSNEFNLERLLPTAGWVKRALEPTNDEILSNLGLDALVFIRVFVFSIRVFSFASVVGIFILLPVNYM--GTEFEEFFDLPKKSMDNFSISNVNDGSNKLWIHFCAIYIFTAVVCSLLYYEHKYILTKRIAHLYSSKPQPQEFTVLVSGVPLVSGNSISETVENFFREYHSSSYLSHIVVHRTDKLKVLMNDAEKLYKKLT--RVKSGSISRQKSRWGGFLGMFGNNVDVVDHYQKKLDKLEDDMRLKQSLLAGE---EVPAAFVSFRTRHGAAIATNIQQGIDPTQWLTEAAPEPEDVHWPFFTASFVRRWISNVVVLVAFVALLILYIVPVVLVQGLANLHQLETWFPFLKGILNMKIVSQVITGYLPSLIFQLFLLIVPPIMLLLSSMQGFISHSQIEKSACIKLLIFTVWNSFFANVLSGSALYRVNVFLE 476
BLAST of Psat4g005520.4 vs. DB:Swiss
Match: CSCLA_ARATH (CSC1-like protein RXW8 OS=Arabidopsis thaliana OX=3702 GN=RXW8 PE=2 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 1.677e-75 Identity = 161/485 (33.20%), Postives = 258/485 (53.20%), Query Frame = 1 Query: 28 AAGINILSAFIFFVAFAILRLQPLNDRVYFPKWYLKGLRTDPVHGGAFVRKVVNLDWRSYIRFLNWMPAALRMPEPELIDHAGLDSVVYLRIYLLGLKIFVPIAFLAWAMLVPVNWTSTGLEIAGVKNITSSDIDKLSISNVQRGSERFWSHIIAAYAFTFWTCYILMKEYGKVAAMRLQFLAAEKRRPDQFSVLVRNIPPDPDESVSELVEHFFLVNHSNTYLTHQVVYNANRLAKLVKKKSKMQNWLIYYQNKLD-RTSIRPEMKTGFLGCCG--TKVDSIDHYTTEIDKLSKEIALERDKVTNDPKSTMPAAFVSFKSRWGAAVCAQTQQTRNPTLWLTEWAPEPRDVYWPNLAIPYVSLTVRRLIVAVAXXXXXXXXMIPIAIVQALASLDGIEKAAPWLKPLVSVPFIKSFIQGFLPGIALKLFLIFLPSILMMMSKFEGFGSISSLERRSASRFYLFSFVNIFLGNILTGTAFQQLDSF 1473 +AGINI + ++ILR QP N VYF G R V GGA R+ + ++ +W+ A E EL+ AGLD+VV+LR+ + ++IF +A + A ++PVN+ + + ++ SS++ +I N++ GS+ W H +A Y T C +L EY +A MRL + +P QF+VL+R IP P++S S+ + FF +S++Y++HQ+VY+ + +L++ +M L + +++ + S+RP CG T S + E D + E T + AAFV FK+R+ A V ++ Q+ NP LW+T+ APEP DVYW NL IPY L +R++ V F F+IP+ +Q L L + A P+L+ ++S FI I G+LP + L LF +P ++M S EG S S ++ + + F+ N+F NIL+G+ +QL+ F Sbjct: 9 SAGINISICIVLLSLYSILRKQPANYCVYF------GRRL--VCGGA--RRYDPFWYERFVPSPSWLVKAWETSEDELLAAAGLDAVVFLRMVIFSIRIFFIVAVICIAFVLPVNYYGQPM-VHKEIHLESSEV--FTIENLKEGSKWLWVHCLALYIITSAACLLLYFEYSTIAKMRLGHITGCASKPSQFTVLIRAIPWSPEQSYSDTLSKFFTNYYSSSYVSHQMVYHNGIIQRLLRDAERMCQTLKHVSPEINCKPSLRP------CTFCGGPTATSSFHILSNEADSVKGMELGELTMTTTTTEQERSAAFVFFKTRYDALVVSEVLQSSNPMLWVTDLAPEPHDVYWKNLNIPYRQLWIRKIATLVGAVAFMFVFLIPVTFIQGLTQLVQLSHAFPFLRGILSKNFINQVITGYLPSVILILFFYAVPPLMMYFSALEGCISRSIRKKSACIKVLYFTIWNVFFVNILSGSVIRQLNVF 474 The following BLAST results are available for this feature:
BLAST of Psat4g005520.4 vs. DB:Swiss
Analysis Date: 2019-09-12 (BLAST: P. sativum Cameor genome v1a vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: P. sativum Cameor genome v1a
Date Performed: 2019-09-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Psat4g005520.4_Ps_Cameor_v1a ID=Psat4g005520.4_Ps_Cameor_v1a; Name=Psat4g005520.4; organism=Pisum sativum; type=mRNA; length=6870bpback to top protein sequence of Psat4g005520.4_Ps_Cameor_v1a >Psat4g005520.4_Ps_Cameor_v1a ID=Psat4g005520.4_Ps_Cameor_v1a; Name=Psat4g005520.4_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=499bpback to top mRNA from alignment at chr4LG4:5925247..5932116+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Psat4g005520.4_Ps_Cameor_v1a ID=Psat4g005520.4_Ps_Cameor_v1a; Name=Psat4g005520.4; organism=Pisum sativum; type=mRNA; length=6870bp; location=Sequence derived from: chr4LG4:5925247..5932116+ (Pisum sativumback to top Coding sequence (CDS) from alignment at chr4LG4:5925247..5932116+ >Psat4g005520.4_Ps_Cameor_v1a ID=Psat4g005520.4_Ps_Cameor_v1a; Name=Psat4g005520.4; organism=Pisum sativum; type=CDS; length=2994bp; location=Sequence derived from: chr4LG4:5925247..5932116+ (Pisum sativumback to top |