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Transcript Overview
Name | Psat6g005640.1 |
Unique Name | Psat6g005640.1_Ps_Cameor_v1a |
Type | mRNA |
Organism | Pisum sativum (pea) |
Sequence length | 693 |
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Species | Type |
Psat6g005640.1 | Psat6g005640.1_Ps_Cameor_v1a-protein | Pisum sativum | polypeptide |
Psat6g005640.1_Ps_Cameor_v1a | Psat6g005640.1_Ps_Cameor_v1a | Pisum sativum | polypeptide |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Psat6g005640.1.cds1 | Psat6g005640.1.cds1_Ps_Cameor_v1a | Pisum sativum | CDS |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Psat6g005640.1.exon1 | Psat6g005640.1.exon1_Ps_Cameor_v1a | Pisum sativum | exon |
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Psat6g005640.1.three_prime_utr1 | Psat6g005640.1.three_prime_utr1_Ps_Cameor_v1a | Pisum sativum | three_prime_UTR |
Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan: P. sativum Cameor genome v1a
Date Performed: 2019-09-12
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 17..40 |
Sequences
The
following sequences are available for this feature:
mRNA sequence >Psat6g005640.1_Ps_Cameor_v1a ID=Psat6g005640.1_Ps_Cameor_v1a; Name=Psat6g005640.1; organism=Pisum sativum; type=mRNA; length=693bp ATGGGCATACAGGATGCTGATGAAGGAGCACATGTCAATACATTTACTGA GGCTGCAGATTTAAATGATGTAAATGAAAGTACACATCCTGAAAGTATCC GAAGAAAATCCTCAGTGTCTAATGGAACTGCTAGTAGAGATACCATTGTG GATATGTTGGCTTCATTAATAGAAGTGGTACGGACAACAGTTTCCTGTGA ATATGTTTATGTTCGAGCGACAGTGATCGAGGCATTGATCTGGATGCAAG GCCCAATCGACTCATTTGATGAAATAGAATCCATTATTGCATCAGAACTC TCTGATCCAGCTTGGTCGGCATGCCTATTAAATGATGTATTGCTTACTCT ACATGCTCGTTTTAAGGCTTCTCCCGATATGGTCGTTACTCTCCTTGAAA TTGATTGAATATTTGCTACTAAAGTTCCAGGAAAGGTTGATGTTGATGAG CTATAATTACTTTGGAAAACTTGTCTTGTTGGAGCTGGTCCTGATGGGAA ACATTAAGCTTTAGAAGTAGTCACAATTGTTCTTGATCTACCACCTCCCT AACCAGGATCTATGCTTGGTCTGACTTTCTTTGGAAAACTTGTCTTGTTG GAGCTGGTCCTGATGGGAAACATTAAGCTTTAGAAGTAGTCACAATTGTT CTTGATCTACCACCTCCCTAACCAGGATCTATGCTTGGTCTGA back to topprotein sequence of Psat6g005640.1_Ps_Cameor_v1a >Psat6g005640.1_Ps_Cameor_v1a ID=Psat6g005640.1_Ps_Cameor_v1a; Name=Psat6g005640.1_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=136bp MGIQDADEGAHVNTFTEAADLNDVNESTHPESIRRKSSVSNGTASRDTIV DMLASLIEVVRTTVSCEYVYVRATVIEALIWMQGPIDSFDEIESIIASEL SDPAWSACLLNDVLLTLHARFKASPDMVVTLLEID* back to topmRNA from alignment at chr6LG2:3951430..3952122+ Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >Psat6g005640.1_Ps_Cameor_v1a ID=Psat6g005640.1_Ps_Cameor_v1a; Name=Psat6g005640.1; organism=Pisum sativum; type=mRNA; length=693bp; location=Sequence derived from: chr6LG2:3951430..3952122+ (Pisum sativum ATGGGCATACAGGATGCTGATGAAGGAGCACATGTCAATACATTTACTGA
GGCTGCAGATTTAAATGATGTAAATGAAAGTACACATCCTGAAAGTATCC
GAAGAAAATCCTCAGTGTCTAATGGAACTGCTAGTAGAGATACCATTGTG
GATATGTTGGCTTCATTAATAGAAGTGGTACGGACAACAGTTTCCTGTGA
ATATGTTTATGTTCGAGCGACAGTGATCGAGGCATTGATCTGGATGCAAG
GCCCAATCGACTCATTTGATGAAATAGAATCCATTATTGCATCAGAACTC
TCTGATCCAGCTTGGTCGGCATGCCTATTAAATGATGTATTGCTTACTCT
ACATGCTCGTTTTAAGGCTTCTCCCGATATGGTCGTTACTCTCCTTGAAA
TTGATTGAATATTTGCTACTAAAGTTCCAGGAAAGGTTGATGTTGATGAG
CTATAATTACTTTGGAAAACTTGTCTTGTTGGAGCTGGTCCTGATGGGAA
ACATTAAGCTTTAGAAGTAGTCACAATTGTTCTTGATCTACCACCTCCCT
AACCAGGATCTATGCTTGGTCTGACTTTCTTTGGAAAACTTGTCTTGTTG
GAGCTGGTCCTGATGGGAAACATTAAGCTTTAGAAGTAGTCACAATTGTT
CTTGATCTACCACCTCCCTAACCAGGATCTATGCTTGGTCTGA back to topCoding sequence (CDS) from alignment at chr6LG2:3951430..3952122+ >Psat6g005640.1_Ps_Cameor_v1a ID=Psat6g005640.1_Ps_Cameor_v1a; Name=Psat6g005640.1; organism=Pisum sativum; type=CDS; length=816bp; location=Sequence derived from: chr6LG2:3951430..3952122+ (Pisum sativum ATGGGCATACAGGATGCTGATGAAGGAGCACATGTCAATACATTTACTGA GGCTGCAGATTTAAATGATGTAAATGAAAGTACACATCCTGAAAGTATCC GAAGAAAATCCTCAGTGTCTAATGGAACTGCTAGTAGAGATACCATTGTG GATATGTTGGCTTCATTAATAGAAGTGGTACGGACAACAGTTTCCTGTGA ATATGTTTATGTTCGAGCGACAGTGATCGAGGCATTGATCTGGATGCAAG GCCCAATCGACTCATTTGATGAAATAGAATCCATTATTGCATCAGAACTC TCTGATCCAGCTTGGTCGGCATGCCTATTAAATGATGTATTGCTTACTCT ACATGCTCGTTTTAAGGCTTCTCCCGATATGGTCGTTACTCTCCTTGAAA TTGATTGAATGGGCATACAGGATGCTGATGAAGGAGCACATGTCAATACA TTTACTGAGGCTGCAGATTTAAATGATGTAAATGAAAGTACACATCCTGA AAGTATCCGAAGAAAATCCTCAGTGTCTAATGGAACTGCTAGTAGAGATA CCATTGTGGATATGTTGGCTTCATTAATAGAAGTGGTACGGACAACAGTT TCCTGTGAATATGTTTATGTTCGAGCGACAGTGATCGAGGCATTGATCTG GATGCAAGGCCCAATCGACTCATTTGATGAAATAGAATCCATTATTGCAT CAGAACTCTCTGATCCAGCTTGGTCGGCATGCCTATTAAATGATGTATTG CTTACTCTACATGCTCGTTTTAAGGCTTCTCCCGATATGGTCGTTACTCT CCTTGAAATTGATTGA back to top
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