rna-KK1_019911

BLAST of rna-KK1_019911 vs. DB:Swiss
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.990e-36
Identity = 84/291 (28.87%), Postives = 142/291 (48.80%), Query Frame = 1

Query:  112 NEVPIDLWNFCMGHLSFKRLQLM--QSCYPFLYSNKNFTCNTCHYAKQKKLPFTXXXXXXXXXFDLLHIDIWGPCSKVSMHGHRYFLMIVDDHSRFTWIYLMHTKSETRTHIANFVAYVETQFDKKIKTIHTDNGYEFLMHNFF---SSKGIIHQTSCVETPEQNGIVERKYQHLLSVTRALLFQSIFLQNFWCFNVST-------------------------------LRVFGCLCYISTLKAHRQKLDPQAHPCVFLGFKPHTKGYLVFDLHTHTFTVSCNILFYENQ 876
            +E+ +DLW+  MGH+S K LQ++  +S   +        C+ C + KQ ++ F +S     +  DL++ D+ GP    SM G++YF+  +DD SR  W+Y++ TK +       F A VE +  +K+K + +DNG E+    F    SS GI H+ +   TP+ NG+ ER  + ++   R++L  +   ++FW   V T                               L+VFGC  +    K  R KLD ++ PC+F+G+     GY ++D        S +++F E++
Sbjct:  418 DEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESE 708          

HSP 2 Score: 115.931 bits (289), Expect = 1.133e-25
Identity = 61/139 (43.88%), Postives = 90/139 (64.75%), Query Frame = 1

Query: 1225 MFISSNTEPTSYAEASRH---DCWVKAMQAELLGLQMNQTWILTTLPPHKIAIGCHWVYKVKYKSNGSIERHKAHLVAKGYTQREGLDFLDTFSPVAKLTTVRXXXXXXXINNWHLKKLDVNNAFLHGELHEEVYMQVP 1632
            + IS + EP S  E   H   +  +KAMQ E+  LQ N T+ L  LP  K  + C WV+K+K   +  + R+KA LV KG+ Q++G+DF + FSPV K+T++R +L+LAA  +  +++LDV  AFLHG+L EE+YM+ P
Sbjct:  803 VLISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQP 941          

BLAST of rna-KK1_019911 vs. DB:Swiss
Match: POLR1_ARATH (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.121e-31
Identity = 91/320 (28.44%), Postives = 149/320 (46.56%), Query Frame = 1

Query:   31 VKDRLYHLTPNHIIPHSIYSSVIQPKCNEVPIDLWNFCMGHLSFKRLQLMQSCYPFLY---SNKNFTCNTCHYAKQKKLPFTXXXXXXXXXFDLLHIDIWGPCSKVSMHGHRYFLMIVDDHSRFTWIYLMHTKSETRTHIANFVAYVETQFDKKIKTIHTDNGYEFL-MHNFFSSKGIIHQTSCVETPEQNGIVERKYQHLLSVTRALLFQSIFLQNFWCF-------------------------------NVSTLRVFGCLCYISTLKAHRQKLDPQAHPCVFLGFKPHTKGYLVFDLHTHTFTVSCNILFYENQFPY 885
             KD LY        P S+++S      ++     W+  +GH +   L  + S Y       S+K  +C+ C   K  K+PF+ S  +++   + ++ D+W     +S   +RY+++ VD  +R+TW+Y +  KS+ +     F   +E +F  +I T ++DNG EF+ +  +FS  GI H TS   TPE NG+ ERK++H++     LL  +   + +W +                               N   LRVFGC CY      ++ KLD ++  CVFLG+      YL   L T    +S ++ F EN FP+
Sbjct:  437 TKDELYEWPIASSQPVSLFAS----PSSKATHSSWHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPF 751          

HSP 2 Score: 128.257 bits (321), Expect = 1.244e-29
Identity = 61/135 (45.19%), Postives = 90/135 (66.67%), Query Frame = 1

Query: 1231 ISSNTEPTSYAEASRHDCWVKAMQAELLGLQMNQTWILTTLPP-HKIAIGCHWVYKVKYKSNGSIERHKAHLVAKGYTQREGLDFLDTFSPVAKLTTVRXXXXXXXINNWHLKKLDVNNAFLHGELHEEVYMQVP 1632
            +++ +EP +  +A + + W  AM +E+     N TW L   PP H   +GC W++  KY S+GS+ R+KA LVAKGY QR GLD+ +TFSPV K T++R++L +A   +W +++LDVNNAFL G L ++VYM  P
Sbjct:  950 LAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQP 1084          

BLAST of rna-KK1_019911 vs. DB:Swiss
Match: POLR2_ARATH (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.402e-31
Identity = 92/328 (28.05%), Postives = 155/328 (47.26%), Query Frame = 1

Query:   34 KDRLYHLTPNHIIPHSIYSSVIQPKCNEVPIDLWNFCMGHLSFKRLQLMQS--CYPFLY-SNKNFTCNTCHYAKQKKLPFTXXXXXXXXXFDLLHIDIWGPCSKVSMHGHRYFLMIVDDHSRFTWIYLMHTKSETRTHIANFVAYVETQFDKKIKTIHTDNGYEF-LMHNFFSSKGIIHQTSCVETPEQNGIVERKYQHLLSVTRALLFQSIFLQNFWCF-------------------------------NVSTLRVFGCLCYISTLKAHRQKLDPQAHPCVFLGFKPHTKGYLVFDLHTHTFTVSCNILFYENQFPYPSLNIDITT 912
            KD LY       I  S   S+    C++     W+  +GH S   L  + S    P L  S+K  +C+ C   K  K+PF++S   +S   + ++ D+W     +S+  +RY+++ VD  +R+TW+Y +  KS+ +     F + VE +F  +I T+++DNG EF ++ ++ S  GI H TS   TPE NG+ ERK++H++ +   LL  +   + +W +                               N   L+VFGC CY      +R KL+ ++  C F+G+      YL   + T     S ++ F E  FP+ + N  ++T
Sbjct:  417 KDELYEWP----IASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVST 739          

HSP 2 Score: 133.265 bits (334), Expect = 2.740e-31
Identity = 63/135 (46.67%), Postives = 92/135 (68.15%), Query Frame = 1

Query: 1231 ISSNTEPTSYAEASRHDCWVKAMQAELLGLQMNQTWILTTLPPHKIAI-GCHWVYKVKYKSNGSIERHKAHLVAKGYTQREGLDFLDTFSPVAKLTTVRXXXXXXXINNWHLKKLDVNNAFLHGELHEEVYMQVP 1632
            +++N+EP +  +A + D W +AM +E+     N TW L   PP  + I GC W++  K+ S+GS+ R+KA LVAKGY QR GLD+ +TFSPV K T++R++L +A   +W +++LDVNNAFL G L +EVYM  P
Sbjct:  933 LAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQP 1067          

BLAST of rna-KK1_019911 vs. DB:Swiss
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 2.706e-21
Identity = 52/134 (38.81%), Postives = 83/134 (61.94%), Query Frame = 1

Query: 1240 NTEPTSYAEASRHD---CWVKAMQAELLGLQMNQTWILTTLPPHKIAIGCHWVYKVKYKSNGSIERHKAHLVAKGYTQREGLDFLDTFSPVAKLTTVRXXXXXXXINNWHLKKLDVNNAFLHGELHEEVYMQVP 1632
            N  P S+ E    D    W +A+  EL   ++N TW +T  P +K  +   WV+ VKY   G+  R+KA LVA+G+TQ+  +D+ +TF+PVA++++ R +L+L    N  + ++DV  AFL+G L EE+YM++P
Sbjct:  888 NDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLP 1021          

HSP 2 Score: 95.9005 bits (237), Expect = 3.251e-19
Identity = 74/292 (25.34%), Postives = 128/292 (43.84%), Query Frame = 1

Query:  130 LWNFCMGHLSFKRLQLMQSCYPF----LYSNKNFTCNTCH---YAKQKKLPFTXXXXXXXXXFDL--LHIDIWGPCSKVSMHGHRYFLMIVDDHSRFTWIYLMHTKSETRTHIANFVAYVETQFDKKIKTIHTDNGYEFL---MHNFFSSKGIIHQTSCVETPEQNGIVERKYQHLLSVTRALLFQSIFLQNFWCFNVST---------------------------------LRVFGCLCYISTLKAHRQKLDPQAHPCVFLGFKPHTKGYLVFDLHTHTFTVSCNILFYE 870
            LW+   GH+S  +L  ++    F    L +N   +C  C      KQ +LPF            L  +H D+ GP + V++    YF++ VD  + +   YL+  KS+  +   +FVA  E  F+ K+  ++ DNG E+L   M  F   KGI +  +   TP+ NG+ ER  + +    R ++  +   ++FW   V T                                 LRVFG   Y+  +K  + K D ++   +F+G++P+  G+ ++D     F V+ +++  E
Sbjct:  417 LWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVH-IKNKQGKFDDKSFKSIFVGYEPN--GFKLWDAVNEKFIVARDVVVDE 705          

BLAST of rna-KK1_019911 vs. DB:Swiss
Match: M820_ARATH (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.571e-21
Identity = 47/109 (43.12%), Postives = 67/109 (61.47%), Query Frame = 1

Query: 1198 LSPSYHHFIMFISSNTEPTSYAEASRHDCWVKAMQAELLGLQMNQTWILTTLPPHKIAIGCHWVYKVKYKSNGSIERHKAHLVAKGYTQREGLDFLDTFSPVAKLTTVR 1524
            L+P Y   I   +   EP S   A +   W +AMQ EL  L  N+TWIL   P ++  +GC WV+K K  S+G+++R KA LVAKG+ Q EG+ F++T+SPV +  T+R
Sbjct:   12 LNPKYSLTIT-TTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIR 119          

BLAST of rna-KK1_019911 vs. DB:Swiss
Match: YH41B_YEAST (Transposon Ty4-H Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY4B-H PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.913e-15
Identity = 60/205 (29.27%), Postives = 92/205 (44.88%), Query Frame = 1

Query:  310 IDIWGPCSKVSMHGHRYFLMIVDDHSRF--TWIYLMHTKSETRTHIANFVAYVETQFDKKIKTIHTDNGYEFL---MHNFFSSKGIIHQTSCVETPEQNGIVERKYQHLLSVTRALLFQSIFLQNFWCFNV-STLRVFGCLCYIST----LKA-------------------------HRQKLDPQAHPCVFLGFKPHTKGYLVF 819
            +DI+GP S  +    RY L++VD+++R+  T  +           I   + YVETQFD+K++ I++D G EF    +  +F SKGI H  +  +    NG  ER  + +++    LL QS     FW + V S   +  CL + ST    LKA                         + +KL P   P + L   P++ GY  F
Sbjct:  629 MDIFGPVSSSNADTKRYMLIMVDNNTRYCMTSTHFNKNAETILAQIRKNIQYVETQFDRKVREINSDRGTEFTNDQIEEYFISKGIHHILTSTQDHAANGRAERYIRTIVTDATTLLRQSNLRVKFWEYAVTSATNIRNCLEHKSTGKLPLKAISRQPVTVRLMSFLPFGEKGIIWNHNHKKLKPSGLPSIILCKDPNSYGYKFF 833          

BLAST of rna-KK1_019911 vs. DB:Swiss
Match: YP41B_YEAST (Transposon Ty4-P Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY4B-P PE=5 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 5.183e-15
Identity = 60/205 (29.27%), Postives = 92/205 (44.88%), Query Frame = 1

Query:  310 IDIWGPCSKVSMHGHRYFLMIVDDHSRF--TWIYLMHTKSETRTHIANFVAYVETQFDKKIKTIHTDNGYEFL---MHNFFSSKGIIHQTSCVETPEQNGIVERKYQHLLSVTRALLFQSIFLQNFWCFNV-STLRVFGCLCYIST----LKA-------------------------HRQKLDPQAHPCVFLGFKPHTKGYLVF 819
            +DI+GP S  +    RY L++VD+++R+  T  +           I   + YVETQFD+K++ I++D G EF    +  +F SKGI H  +  +    NG  ER  + +++    LL QS     FW + V S   +  CL + ST    LKA                         + +KL P   P + L   P++ GY  F
Sbjct:  629 MDIFGPVSSSNADTKRYMLIMVDNNTRYCMTSTHFNKNAETILAQIRKNIQYVETQFDRKVREINSDRGTEFTNDQIEEYFISKGIHHILTSTQDHAANGRAERYIRTIVTDATTLLRQSNLRVKFWEYAVTSATNIRNCLEHKSTGKLPLKAISRQPVTVRLMSFLPFGEKGIIWNHNHKKLKPSGLPSIILCKDPNSYGYKFF 833          

BLAST of rna-KK1_019911 vs. DB:Swiss
Match: YJ41B_YEAST (Transposon Ty4-J Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY4B-J PE=3 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 1.779e-13
Identity = 58/205 (28.29%), Postives = 91/205 (44.39%), Query Frame = 1

Query:  310 IDIWGPCSKVSMHGHRYFLMIVDDHSRF--TWIYLMHTKSETRTHIANFVAYVETQFDKKIKTIHTDNGYEFL---MHNFFSSKGIIHQTSCVETPEQNGIVERKYQHLLSVTRALLFQSIFLQNFWCFNV-STLRVFGCLCYIST----LKA-------------------------HRQKLDPQAHPCVFLGFKPHTKGYLVF 819
            +DI+GP S  +    RY L++VD+++R+  T  +           +   + YVETQFD+K++ I++D G EF    +  +F SKGI H  +  +    NG  ER  + +++    LL QS     FW + V S   +   L + ST    LKA                         + +KL P   P + L   P++ GY  F
Sbjct:  630 MDIFGPVSSSNADTKRYMLIMVDNNTRYCMTSTHFNKNAETILAQVRKNIQYVETQFDRKVREINSDRGTEFTNDQIEEYFISKGIHHILTSTQDHAANGRAERYIRTIITDATTLLRQSNLRVKFWEYAVTSATNIRNYLEHKSTGKLPLKAISRQPVTVRLMSFLPFGEKGIIWNHNHKKLKPSGLPSIILCKDPNSYGYKFF 834          

BLAST of rna-KK1_019911 vs. DB:Swiss
Match: YG21B_YEAST (Transposon Ty2-GR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-GR1 PE=5 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 3.991e-13
Identity = 73/294 (24.83%), Postives = 124/294 (42.18%), Query Frame = 1

Query:   49 HLTPNHIIPHSIYSSVIQPKCNEVPIDLWNFCMGHLSFKRLQ--LMQSCYPFL------YSNKN-FTCNTCHYAKQKK----LPFTXXXXXXXXXFDLLHIDIWGPCSKVSMHGHRYFLMIVDDHSRFTWIYLMHTKSETR--THIANFVAYVETQFDKKIKTIHTDNGYEF---LMHNFFSSKGIIHQTSCVETPEQNGIVERKYQHLLSVTRALLFQSIFLQNFW--CFNVSTLRVFGCLCYISTLKAHRQ-----KLD-----PQAHPCVFLGFKP----HTKGYLVFDLH 828
            +L P+HI   +I +       N+ P  L +  +GH +F+ +Q  L ++   +L      +SN + + C  C   K  K          +  +   F  LH DI+GP   +      YF+   D+ +RF W+Y +H + E        + +A+++ QF+ ++  I  D G E+    +H FF+++GI    +       +G+ ER  + LL+  R LL  S    + W      ST+ +   L      K+ RQ      LD     P   P +     P    H +G   + LH
Sbjct:  566 YLIPSHISKLTINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTI-IRNSLVSPKKRKSARQHAGLAGLDITTILPFGQPVIVNNHNPDSKIHPRGIPGYALH 858          

BLAST of rna-KK1_019911 vs. DB:Swiss
Match: YL21B_YEAST (Transposon Ty2-LR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-LR1 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 4.662e-13
Identity = 73/294 (24.83%), Postives = 124/294 (42.18%), Query Frame = 1

Query:   49 HLTPNHIIPHSIYSSVIQPKCNEVPIDLWNFCMGHLSFKRLQ--LMQSCYPFL------YSNKN-FTCNTCHYAKQKK----LPFTXXXXXXXXXFDLLHIDIWGPCSKVSMHGHRYFLMIVDDHSRFTWIYLMHTKSETR--THIANFVAYVETQFDKKIKTIHTDNGYEF---LMHNFFSSKGIIHQTSCVETPEQNGIVERKYQHLLSVTRALLFQSIFLQNFW--CFNVSTLRVFGCLCYISTLKAHRQ-----KLD-----PQAHPCVFLGFKP----HTKGYLVFDLH 828
            +L P+HI   +I +       N+ P  L +  +GH +F+ +Q  L ++   +L      +SN + + C  C   K  K          +  +   F  LH DI+GP   +      YF+   D+ +RF W+Y +H + E        + +A+++ QF+ ++  I  D G E+    +H FF+++GI    +       +G+ ER  + LL+  R LL  S    + W      ST+ +   L      K+ RQ      LD     P   P +     P    H +G   + LH
Sbjct:  566 YLIPSHISKLTINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTI-IRNSLVSPKNDKSARQHAGLAGLDITTILPFGQPVIVNNHNPDSKIHPRGIPGYALH 858