rna-KK1_009529

BLAST of rna-KK1_009529 vs. DB:Swiss
Match: POLR1_ARATH (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 337.806 bits (865), Expect = 6.314e-104
Identity = 177/400 (44.25%), Postives = 239/400 (59.75%), Query Frame = 1

Query:    1 LDINNAFLHGDLNEEVYMHLPPG-LPSTKSGQVCRLNRSLYGLKQASRQWYARLSTFLLTHGYTHSFADHSLFLKFTDSTSTALLVYVDDIVLAGNN---------------------------------------LIQRKYTLDILSHTGMLACCPSSTPMDYKTGLSADTGTPLTDPSSYRRLIGRLIYLTNTRHDIAHAVHHLSQFVSQPTSSHQQAVFRILRYLKQAPGQGIFLAADSSLQLKAFSDSDWAGCIDTRRSVTGFSVYIGHSLISWRSKKQPTVSRSSSEAEYRALASTACEIQWLTYLLEDFRISFTRPALLYCDNQSALQIASNQVFHERTKHIEIDCHLFREKVTNGLLKLLPVSSSSQLADIYTKALSLSHFKELCSKLGMSNI 1080
            LD+NNAFL G L ++VYM  PPG +   +   VC+L ++LYGLKQA R WY  L  +LLT G+ +S +D SLF+     +   +LVYVDDI++ GN+                                       L QR+Y LD+L+ T M+   P +TPM     LS  +GT LTDP+ YR ++G L YL  TR DI++AV+ LSQF+  PT  H QA+ RILRYL   P  GIFL   ++L L A+SD+DWAG  D   S  G+ VY+GH  ISW SKKQ  V RSS+EAEYR++A+T+ E+QW+  LL +  I  TRP ++YCDN  A  + +N VFH R KHI ID H  R +V +G L+++ VS+  QLAD  TK LS + F+   SK+G++ +
Sbjct: 1064 LDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAFQNFASKIGVTRV 1463          

BLAST of rna-KK1_009529 vs. DB:Swiss
Match: POLR2_ARATH (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 327.791 bits (839), Expect = 2.672e-100
Identity = 171/406 (42.12%), Postives = 236/406 (58.13%), Query Frame = 1

Query:    1 LDINNAFLHGDLNEEVYMHLPPG-LPSTKSGQVCRLNRSLYGLKQASRQWYARLSTFLLTHGYTHSFADHSLFLKFTDSTSTALLVYVDDIVLAGNNLI---------------------------------------QRKYTLDILSHTGMLACCPSSTPMDYKTGLSADTGTPLTDPSSYRRLIGRLIYLTNTRHDIAHAVHHLSQFVSQPTSSHQQAVFRILRYLKQAPGQGIFLAADSSLQLKAFSDSDWAGCIDTRRSVTGFSVYIGHSLISWRSKKQPTVSRSSSEAEYRALASTACEIQWLTYLLEDFRISFTRPALLYCDNQSALQIASNQVFHERTKHIEIDCHLFREKVTNGLLKLLPVSSSSQLADIYTKALSLSHFKELCSKLGMSNIYSQLEG 1098
            LD+NNAFL G L +EVYM  PPG +   +   VCRL +++YGLKQA R WY  L T+LLT G+ +S +D SLF+     +   +LVYVDDI++ GN+ +                                       QR+YTLD+L+ T ML   P +TPM     L+  +GT L DP+ YR ++G L YL  TR D+++AV+ LSQ++  PT  H  A+ R+LRYL   P  GIFL   ++L L A+SD+DWAG  D   S  G+ VY+GH  ISW SKKQ  V RSS+EAEYR++A+T+ E+QW+  LL +  I  + P ++YCDN  A  + +N VFH R KHI +D H  R +V +G L+++ VS+  QLAD  TK LS   F+    K+G+  +     G
Sbjct: 1047 LDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGVIKVPPSCGG 1452          

BLAST of rna-KK1_009529 vs. DB:Swiss
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 1.108e-66
Identity = 140/405 (34.57%), Postives = 208/405 (51.36%), Query Frame = 1

Query:    1 LDINNAFLHGDLNEEVYMHLPPGLP-STKSGQVCRLNRSLYGLKQASRQWYARLSTFLLTHGYTHSFADHSLFLK-FTDSTSTALLVYVDDIVLAGNN-----------------------------------------LIQRKYTLDILSHTGMLACCPSSTPMDYKTGLSADTGTPLTDPSS------YRRLIGRLIY-LTNTRHDIAHAVHHLSQFVSQPTSSHQQAVFRILRYLKQAPGQGIFLAADSSLQLKAFSDSDWAGCIDTRRSVTGFSVYIGHSLISWRSKKQPTVSRSSSEAEYRALASTACEIQWLTYLLEDFRISFTRPALLYCDNQSALQIASNQVFHERTKHIEIDCHLFREKVTNGLLKLLPVSSSSQLADIYTKALSLSHFKELCSKL 1065
            LD+  AFLHGDL EE+YM  P G   + K   VC+LN+SLYGLKQA RQWY +  +F+ +  Y  +++D  ++ K F+++    LL+YVDD+++ G +                                         L Q KY   +L    M    P STP+     LS        +         Y   +G L+Y +  TR DIAHAV  +S+F+  P   H +AV  ILRYL+   G  +       + LK ++D+D AG ID R+S TG+        ISW+SK Q  V+ S++EAEY A   T  E+ WL   L++  +   +  ++YCD+QSA+ ++ N ++H RTKHI++  H  RE V +  LK+L +S++   AD+ TK +  + F ELC +L
Sbjct:  921 LDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPI-LKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLH-QKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKF-ELCKEL 1322          

BLAST of rna-KK1_009529 vs. DB:Swiss
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 209.92 bits (533), Expect = 5.040e-59
Identity = 142/407 (34.89%), Postives = 203/407 (49.88%), Query Frame = 1

Query:    1 LDINNAFLHGDLNEEVYMHLPPGLPSTKSGQVCRLNRSLYGLKQASRQWYARLSTFLLTHGYTHSFADHSLFL--KFTDSTSTALLVYVDDIVLAG------NN---------------------------------LIQRKYTLDILSHTGMLACCPSSTPMDYKTGLS-----ADTGTPLTDPSSYRRLIGRLIYLT-NTRHDIAHAVHHLSQFVSQPTSSHQQAVFRILRYLKQAPGQGIFLAADSSLQLK--AFSDSDWAGCIDTRRSVTGFSVYI-GHSLISWRSKKQPTVSRSSSEAEYRALASTACEIQWLTYLLEDFRISFTRPALLYCDNQSALQIASNQVFHERTKHIEIDCHLFREKVTNGLLKLLPVSSSSQLADIYTKALSLSHFKELCSKLGM 1071
            +D+  AFL+G L EE+YM LP G+ S  S  VC+LN+++YGLKQA+R W+      L    + +S  D  +++  K   + +  +L+YVDD+V+A       NN                                 L Q  Y   ILS   M  C   STP+  K          D  TP       R LIG L+Y+   TR D+  AV+ LS++ S+  S   Q + R+LRYLK      +    + + + K   + DSDWAG    R+S TG+   +   +LI W +K+Q +V+ SS+EAEY AL     E  WL +LL    I    P  +Y DNQ  + IA+N   H+R KHI+I  H  RE+V N ++ L  + + +QLADI+TK L  + F EL  KLG+
Sbjct: 1001 MDVKTAFLNGTLKEEIYMRLPQGI-SCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCNTPC------RSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKLGL 1400          

BLAST of rna-KK1_009529 vs. DB:Swiss
Match: M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 1.289e-47
Identity = 84/175 (48.00%), Postives = 115/175 (65.71%), Query Frame = 1

Query:  277 AGNNLIQRKYTLDILSHTGMLACCPSSTPMDYKTGLSADTGTPLTDPSSYRRLIGRLIYLTNTRHDIAHAVHHLSQFVSQPTSSHQQAVFRILRYLKQAPGQGIFLAADSSLQLKAFSDSDWAGCIDTRRSVTGFSVYIGHSLISWRSKKQPTVSRSSSEAEYRALASTACEIQW 801
            +G  L Q KY   IL++ GML C P STP+  K   S  T     DPS +R ++G L YLT TR DI++AV+ + Q + +PT +    + R+LRY+K     G+++  +S L ++AF DSDWAGC  TRRS TGF  ++G ++ISW +K+QPTVSRSS+E EYRALA TA E+ W
Sbjct:   52 SGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAK-YPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225          

BLAST of rna-KK1_009529 vs. DB:Swiss
Match: M240_ARATH (Uncharacterized mitochondrial protein AtMg00240 OS=Arabidopsis thaliana OX=3702 GN=AtMg00240 PE=4 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.255e-23
Identity = 46/78 (58.97%), Postives = 58/78 (74.36%), Query Frame = 1

Query:  448 IYLTNTRHDIAHAVHHLSQFVSQPTSSHQQAVFRILRYLKQAPGQGIFLAADSSLQLKAFSDSDWAGCIDTRRSVTGF 681
            +YLT TR D+  AV+ LSQF S   ++  QAV+++L Y+K   GQG+F +A S LQLKAF+DSDWA C DTRRSVTGF
Sbjct:    1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSDWASCPDTRRSVTGF 78          

BLAST of rna-KK1_009529 vs. DB:Swiss
Match: YCH4_YEAST (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 2.472e-23
Identity = 78/308 (25.32%), Postives = 135/308 (43.83%), Query Frame = 1

Query:    1 LDINNAFLHGDLNEEVYMHLPPGLPSTKSGQ-VCRLNRSLYGLKQASRQWYARLSTFLLTHGYTHSFADHSLFLKFTDSTSTALLVYVDDIVLA------------------------------GNNLIQ----------RKYTLDILSHTGMLACCPSSTPMDYKTGLSADTGTPLTDPSSYRRLIGRLIYLTNT-RHDIAHAVHHLSQFVSQPTSSHQQAVFRILRYLKQAPGQGIFLAADSSLQLKAFSDSDWAGCIDTRRSVTGFSVYIGHSLISWRSKK-QPTVSRSSSEAEYRALASTACEI 795
            +D++ AFL+  ++E +Y+  PPG  + ++   V  L   +YGLKQA   W   ++  L   G+     +H L+ + T      + VYVDD+++A                              G N+ Q          + Y     S + +     + TP+     L   T   L D + Y+ ++G+L++  NT R DI++ V  LS+F+ +P + H ++  R+LRYL       +   + S L L  + D+      D   S  G+   +  + ++W SKK +  +   S+EAEY   + T  EI
Sbjct:    1 MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKKIGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKVDKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDITPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAEYITASETVMEI 308          

BLAST of rna-KK1_009529 vs. DB:Swiss
Match: YB11B_YEAST (Transposon Ty1-BL Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY1B-BL PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.829e-10
Identity = 36/107 (33.64%), Postives = 59/107 (55.14%), Query Frame = 1

Query:    1 LDINNAFLHGDLNEEVYMHLPPGLPSTKSGQVCRLNRSLYGLKQASRQWYARLSTFLLTHGYTHSFADHSLFLKFTDSTSTALLVYVDDIVLAGNNLIQRKYTLDIL 321
            LDI++A+L+ D+ EE+Y+  PP L    + ++ RL +SLYGLKQ+   WY  + ++L+           S   K   ++   + ++VDD+VL   NL   K  +D L
Sbjct: 1345 LDISSAYLYADIKEELYIRPPPHL--GMNDKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFK---NSQVTICLFVDDMVLFSKNLNSNKRIIDKL 1446          

BLAST of rna-KK1_009529 vs. DB:Swiss
Match: YG11B_YEAST (Transposon Ty1-GR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY1B-GR1 PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 2.453e-10
Identity = 36/107 (33.64%), Postives = 59/107 (55.14%), Query Frame = 1

Query:    1 LDINNAFLHGDLNEEVYMHLPPGLPSTKSGQVCRLNRSLYGLKQASRQWYARLSTFLLTHGYTHSFADHSLFLKFTDSTSTALLVYVDDIVLAGNNLIQRKYTLDIL 321
            LDI++A+L+ D+ EE+Y+  PP L    + ++ RL +SLYGLKQ+   WY  + ++L+           S   K   ++   + ++VDD+VL   NL   K  +D L
Sbjct: 1345 LDISSAYLYADIKEELYIRPPPHL--GMNDKLIRLKKSLYGLKQSGANWYETIKSYLIQQCGMEEVRGWSCVFK---NSQVTICLFVDDMVLFSKNLNSNKRIIDKL 1446          

BLAST of rna-KK1_009529 vs. DB:Swiss
Match: YM13B_YEAST (Transposon Ty1-MR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY1B-MR1 PE=1 SV=2)

HSP 1 Score: 65.0846 bits (157), Expect = 5.359e-10
Identity = 35/107 (32.71%), Postives = 59/107 (55.14%), Query Frame = 1

Query:    1 LDINNAFLHGDLNEEVYMHLPPGLPSTKSGQVCRLNRSLYGLKQASRQWYARLSTFLLTHGYTHSFADHSLFLKFTDSTSTALLVYVDDIVLAGNNLIQRKYTLDIL 321
            LDI++A+L+ D+ EE+Y+  PP L    + ++ RL +SLYGLKQ+   WY  + ++L+           S      +++   + ++VDD+VL   NL   K  +D L
Sbjct: 1345 LDISSAYLYADIKEELYIRPPPHL--GMNDKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVF---ENSQVTICLFVDDMVLFSKNLNSNKRIIDKL 1446