Vigun01g014600.2

Transcript Overview
NameVigun01g014600.2
Unique NameVigun01g014600.2_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length1879
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu01supercontigVu01:1616366..1618332 -Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
psvuL389Pisum sativum Cameor genome v1aPisum sativum
crvuL582Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL468Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL358Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuL366Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuL580Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anvuL0393Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0781Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
vuzwsR039Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL218Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL192Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL471Vicia faba cv. Tiffany genome v1.0Vicia faba
vrvvuL327Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL609Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL618Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR001Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR006Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
avjvuL495Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL338Cicer arietinum
carvuL347Cicer arietinum
carvuL535Cicer arietinum
ccavuL073Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR050Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR063Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR017Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL490Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL509Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL399Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR000Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
evm.model.Chr01.131.1.6211316aVigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun01g014600.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun01g014600Vigun01g014600_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g014600.2Vigun01g014600.2_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun01g014600.2_Vu_IT97K-499-35_v1.1Vigun01g014600.2_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g014600.2.v1.1.CDS.2Vigun01g014600.2.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g014600.2.v1.1.CDS.1Vigun01g014600.2.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g014600.2.v1.1.three_prime_UTR.1Vigun01g014600.2.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g014600.2.v1.1.five_prime_UTR.1Vigun01g014600.2.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


Homology
BLAST of Vigun01g014600.2 vs. DB:Swiss
Match: PP422_ARATH (Pentatricopeptide repeat-containing protein At5g47360 OS=Arabidopsis thaliana OX=3702 GN=At5g47360 PE=2 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 4.654e-106
Identity = 176/361 (48.75%), Postives = 227/361 (62.88%), Query Frame = 1
Query:  115 ADTLCTHLHQSSGSVENSLSKVKPELDSQCVIQVLNSCHPKQPLLGVRFFVWAGVQSGYRHSAYTYNKACKLLGIRQNPQIIRDVVLSYEAEGCLVNANMFREVLKLCKEAQLAEEALWVLRKLEQSFNIRADTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEK---GGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDS-LCVEGRVEEAYKLIDKFVVEHGVSYGDCCSSLVISLIRIKKVEEATKLFMEMLSGDARPDTLASSLLLKELCM 1185
            A+ L   L   + ++E  L+    +LDS C+ +VL  C P Q   G+RFF+WAG  S +RHSAY Y KAC +L IR  P +I+ V+ SY  E C VN    R VL LC +A LA+EALWVLRK  + FN+ ADTV YN+VIRL    GD+  A+ L  EM   GLYPD+ITY +++ G+C+AG+ + A+ L K M  H C  N V  S IL+G+C+SG ME ALELL +MEK   GG  SPN VTYT VIQ+FC++ +  EAL +LDRM   GC  N VT   L+   L  +  V+   KLIDK V   GVS  +C SS  +SLIR+K+ EEA K+F  ML    RPD LA S + +ELC+
Sbjct:   33 AERLYGQLQGCTSNLEKELASANVQLDSSCINEVLRRCDPNQFQSGLRFFIWAGTLSSHRHSAYMYTKACDILKIRAKPDLIKYVIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPE-FNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCL 392          
BLAST of Vigun01g014600.2 vs. DB:Swiss
Match: PPR39_ARATH (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 4.000e-42
Identity = 91/259 (35.14%), Postives = 147/259 (56.76%), Query Frame = 1
Query:  433 LCKEAQLAEEALWVLRKLEQSFNIRADTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKF----VVEHGVSYGDCCSSLVISLIRIKKVEEATKLFMEMLSGDARPDTLASSLLLKELCMKAQL 1197
            +CK  Q A  A+ +LRK+E+  NI+ D V Y+++I   CK+G ++ A  L  EM + G   D+ITY  L+ GFC+AGR +    LL+ M   + SPN+V  S ++D   + G +  A +LL +M + G  +PN +TY S+I  FCK  +  EA+ ++D M + GC  + +T   L++  C   R+++  +L  +     V+ + V+Y    ++LV    +  K+E A KLF EM+S   RPD ++  +LL  LC   +L
Sbjct:  238 MCKSGQTAL-AMELLRKMEER-NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG-IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTY----NTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGEL 489          

HSP 2 Score: 102.834 bits (255), Expect = 2.262e-22
Identity = 86/334 (25.75%), Postives = 146/334 (43.71%), Query Frame = 1
Query:  292 RHSAYTYNKACKLLGIRQNPQI--IRDVVLSYEAE---------GCLVNANMFREVLKLCK--EAQLAEEALWVL----------RKLEQSFNI---------RADTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKFVVEHGVSYGDCCSSLVISLIRIKKVEEATKLFMEMLSGDARPDTLASSLLLKELCMKAQL 1197
            R+ +Y    +  L+GI+ +  +   RD++ S               +     +  VL LCK  E++    +++ L          RKL  +F+            DTV++N ++   C    +  A +L   M   G  P LIT   LV G C  G+   A  L+  M      PN V    +L+ +C+SG   +A+ELL KME+  +   + V Y+ +I   CK G    A ++ + M+  G  A+ +T  TL+   C  GR ++  KL+   +           S L+ S ++  K+ EA +L  EM+     P+T+  + L+   C + +L
Sbjct:   52 RNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEE-RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL 384          

HSP 3 Score: 91.2781 bits (225), Expect = 1.827e-18
Identity = 61/198 (30.81%), Postives = 98/198 (49.49%), Query Frame = 1
Query:  433 LCKEAQLAEEALWVLRKLEQSFNIRADTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKFVVE 1026
             CKE +L EEA+ ++  L  S     D + +N++I   CK   I+   +L  EMSL G+  + +TY  LV+GFC +G+ E A  L + M   R  P++V    +LDGLC +G +E ALE+  K+EK      ++  Y  +I   C   +  +A D+   +   G   +      ++  LC +  + +A  L  K   E
Sbjct:  378 FCKENRL-EEAIQMV-DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEK-SKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEE 572          
BLAST of Vigun01g014600.2 vs. DB:Swiss
Match: PPR36_ARATH (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12300 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 8.099e-38
Identity = 96/306 (31.37%), Postives = 158/306 (51.63%), Query Frame = 1
Query:  277 VQSGYRHSAYTYNKACK---LLGIRQNPQIIRDVVLSYEAEGCLVNANMFREVLK-LCKEAQLAEEALWVLRKLEQSFNIRADTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKFVVEHGVSYGDCCSSLVISLIRIKKVEEATKLFMEMLSGDARPDTLASSLLLKELC 1182
            V+ G++    T N       L G      ++ D ++ Y   GC  NA  +  VL  +CK  Q A  A+ +LRK+E+  NI+ D V Y+++I   CK+G ++ A  L  EM + G+  ++ITY  L+ GFC+AGR +    LL+ M   + +PN+V  S ++D   + G +  A EL  +M   G  +P+ +TYTS+I  FCK     +A  ++D M + GC  N  T   L++  C   R+++  +L  K  +   V+     ++L+     + K+  A +LF EM+S    P+ +   +LL  LC
Sbjct:  185 VEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY---GCQPNAVTYGPVLNVMCKSGQTAL-AMELLRKMEER-NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG-IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLC 484          

HSP 2 Score: 111.694 bits (278), Expect = 3.029e-25
Identity = 75/254 (29.53%), Postives = 120/254 (47.24%), Query Frame = 1
Query:  436 CKEAQLAEEALWVLRKLEQSFNIRADTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKFVVEHGVSYGDCCSSLVISLIRIKKVEEATKLFMEMLSGDARPDTLASSLLLKELCMKAQL 1197
            C++  LA  A+  + KL    N    T+ ++ +I   C  G +  A +L   M   G  PDLIT   LV G C +G+   A  L+  M  + C PN V    +L+ +C+SG   +A+ELL KME+  +   + V Y+ +I   CK G    A ++ + M+  G   N +T   L+   C  GR ++  KL+   +           S L+ S ++  K+ EA +L  EM+     PDT+  + L+   C +  L
Sbjct:  136 CRKLCLAFSAMGKIIKLGYEPN----TITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEE-RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 384          

HSP 3 Score: 89.3521 bits (220), Expect = 7.272e-18
Identity = 54/172 (31.40%), Postives = 85/172 (49.42%), Query Frame = 1
Query:  499 NIRADTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDK 1014
            NIR     +N++I   CK   I+   +L  +MSL G+  D +TY  L++GFC+ G+   A  L + M   +  PN+V    +LDGLC +G  E ALE+ +K+EK      ++  Y  +I   C   +  +A D+   +   G      T   ++  LC +G + EA  L  K
Sbjct:  402 NIRT----FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK-SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 568          

HSP 4 Score: 88.1965 bits (217), Expect = 1.818e-17
Identity = 63/248 (25.40%), Postives = 125/248 (50.40%), Query Frame = 1
Query:  385 AEGCLVNANMFREVLKLCKEAQLAEEALWVLRKLEQSFNIRADTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKFVVEHGVSYGDCCSSLVISLIRIKKVEEATKLFMEMLS 1128
            ++GC  N   F  ++    +A   ++ L + RK+     + ADTV YN +I+  C+ G +  A++L  EM    + P+++TY  L++G CD G  E A  + + +   +   ++ + + I+ G+C +  ++ A +L   +   G   P V TY  +I   CK+G  +EA  +  +M+  G   +  T   L+ +   +G   ++ KLI++ +   G S       +VI ++   +++++   F++MLS
Sbjct:  396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLR-GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG-VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEE-LKRCGFSVDASTIKMVIDMLSDGRLKKS---FLDMLS 637          

HSP 5 Score: 80.8777 bits (198), Expect = 4.257e-15
Identity = 60/230 (26.09%), Postives = 111/230 (48.26%), Query Frame = 1
Query:  496 FNIRADTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKFVVEHGVSYGDCCSSLVIS-LIRIKKVEEATKLFMEMLSGDARPDTLASSLLLKELC 1182
            F+  A T  Y++V+ LC              +M L G+  +L T   ++  FC   +   A+S +  +      PN +  S +++GLC  G +  ALEL+D+M + G   P+++T  +++   C  G+ AEA+ ++D+M   GC  N VT   +++ +C  G+   A +L+ K + E  +       S++I  L +   ++ A  LF EM       + +  ++L+   C
Sbjct:   95 FSAIAKTKQYDLVLALC-------------KQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH-KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRK-MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309          

HSP 6 Score: 62.3882 bits (150), Expect = 3.792e-9
Identity = 47/183 (25.68%), Postives = 84/183 (45.90%), Query Frame = 1
Query:  664 RPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKFVVEHGVSYGDCCSSLVISLIRIKKVEEATKLFMEMLSGDARPDTLASSLLLKELCMKAQLAFVKE 1212
            + + A  L + M   R  P ++  S +   + ++   ++ L L  +ME  G  + N+ T + +I  FC+  +   A   + ++   G   N +T  TL++ LC+EGRV EA +L+D+ V           ++LV  L    K  EA  L  +M+    +P+ +    +L  +C   Q A   E
Sbjct:   68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKG-IAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249          
BLAST of Vigun01g014600.2 vs. DB:Swiss
Match: PPR37_ARATH (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX=3702 GN=At1g12620 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.378e-37
Identity = 94/265 (35.47%), Postives = 144/265 (54.34%), Query Frame = 1
Query:  403 NANMFREVLK-LCKEAQLAEEALWVLRKLEQSFNIRADTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKF----VVEHGVSYGDCCSSLVISLIRIKKVEEATKLFMEMLSGDARPDTLASSLLLKELC 1182
            N   +  VLK +CK  Q A  A+ +LRK+E+   I+ D V Y+++I   CK+G ++ A  L  EM + G   D+I Y  L+ GFC AGR +    LL+ M   + +P++V  SA++D   + G +  A EL  +M + G  SP+ VTYTS+I  FCK  Q  +A  +LD M + GC  N  T   L++  C    +++  +L  K     VV   V+Y    ++L+     + K+E A +LF EM+S   RPD ++  +LL  LC
Sbjct:  211 NEVTYGPVLKVMCKSGQTAL-AMELLRKMEER-KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG-ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTY----NTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468          

HSP 2 Score: 105.916 bits (263), Expect = 2.175e-23
Identity = 75/254 (29.53%), Postives = 117/254 (46.06%), Query Frame = 1
Query:  436 CKEAQLAEEALWVLRKLEQSFNIRADTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKFVVEHGVSYGDCCSSLVISLIRIKKVEEATKLFMEMLSGDARPDTLASSLLLKELCMKAQL 1197
            C++  LA  A+  + KL        DTV ++ +I   C  G +  A +L   M   G  P LIT  ALV G C  G+   A  L+  M      PN V    +L  +C+SG   +A+ELL KME+      + V Y+ +I   CK G    A ++ + M+  G  A+ +   TL+   C  GR ++  KL+   +           S+L+   ++  K+ EA +L  EM+     PDT+  + L+   C + QL
Sbjct:  120 CRKLSLAFSAMGKIIKL----GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEE-RKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368          

HSP 3 Score: 100.908 bits (250), Expect = 1.079e-21
Identity = 67/248 (27.02%), Postives = 129/248 (52.02%), Query Frame = 1
Query:  385 AEGCLVNANMFREVLKLCKEAQLAEEALWVLRKLEQSFNIRADTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKFVVEHGVSYGDCCSSLVISLIRIKKVEEATKLFMEMLS 1128
            ++GC  N   F  ++    +A L ++ L + RK+     + ADTV YN +I+  C+ G +E A++L  EM    + PD+++Y  L++G CD G PE A  + + +   +   ++ + + I+ G+C +  ++ A +L   +   G   P+V TY  +I   CK+G  +EA  +  +M+  G   N  T   L+ +   EG   ++ KLI++ +   G S       +V+ ++   +++++   F++MLS
Sbjct:  380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR-GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG-VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEE-IKRCGFSVDASTVKMVVDMLSDGRLKKS---FLDMLS 621          

HSP 4 Score: 100.523 bits (249), Expect = 1.531e-21
Identity = 71/264 (26.89%), Postives = 125/264 (47.35%), Query Frame = 1
Query:  424 VLKLCKEAQLAEEALWVLRKLEQSFNIRADTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKFVVEHGVSYGDCCSSLVISLIRIKKVEEATKLFMEMLSGDARPDTLASSLLLKELCMKAQLAFVKEA 1215
            VL LCK+ +L                I  +    +++I  CC+   +  A    G++   G  PD +T+  L+ G C  GR   A  L+  M      P L+ L+A+++GLC +G +  A+ L+D+M + G   PN VTY  V++  CK GQ A A+++L +M+      + V    ++D LC +G ++ A+ L ++  ++   +     ++L+       + ++  KL  +M+     PD +A S L+          FVKE 
Sbjct:   91 VLDLCKQMELK--------------GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETG-FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALID--------CFVKEG 331          
BLAST of Vigun01g014600.2 vs. DB:Swiss
Match: PPR2_ARATH (Pentatricopeptide repeat-containing protein At1g02060, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g02060 PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 4.106e-36
Identity = 91/328 (27.74%), Postives = 166/328 (50.61%), Query Frame = 1
Query:  235 KQPLLGVRFFVWAGVQSGYRHSAYTYNKACKLLGIRQNPQIIRDVVLSYE--AEGCL-VNANMFREVLKLCKEAQLAEEALWVLRKLEQSFNIRADTVMYNVVIRLCCKNGDIETAEKLTGEMSLN-GLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKM-EKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKFVVEHGVSYGDCCSS--LVISLIRIKKVEEATKLFMEMLSGDARPDTLASSLLLKELCMKAQL 1197
            K P  G+RFF W     G+ H   ++    + LG  +N  + R+ + S E  + GC+ +    F  +++    A L +E++ + + ++Q   I    + +N ++ +  K G    A  L  EM    G+ PD  T+  L+ GFC     + A+ + K M ++ C+P++V  + I+DGLCR+G +++A  +L  M +K  D  PNVV+YT++++ +C + +  EA+ +   M + G   N VT  TL+  L    R +E   ++            D C+   L+ +      ++ A K+F EML+    PD+ + S+L++ LCM+ + 
Sbjct:   79 KVPADGLRFFDWVS-NKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQ-MGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEF 404          

HSP 2 Score: 58.5362 bits (140), Expect = 6.212e-8
Identity = 65/292 (22.26%), Postives = 121/292 (41.44%), Query Frame = 1
Query:  352 QIIRDVVLSYE---AEGCLVNANMFREVLKLCKEAQLAEEALWVLRKLEQSFNIRA-DTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLK-------VMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKFVVEHGVSYGDCCSSLVISLIRIKKVEEATKLFMEMLSGDARPDTLASSLLLKELCMKAQ 1194
            Q I + VL +    + G   NA  +  ++K   EA   +E   +L     +F   A D   +N++I+  C  G ++ A K+  EM    L+PD  +Y  L+   C     + A +L         ++    C P     + + + LC +G  + A ++  ++ K G   P   +Y ++I   C+ G++  A ++L  M       +  T   L+D L   G    A+  + + +    +       S++  L + K   E+  L   ML    R +   S+ +++ L   AQ
Sbjct:  295 QEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDP--PSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQ 584          

HSP 3 Score: 54.6842 bits (130), Expect = 9.899e-7
Identity = 45/170 (26.47%), Postives = 76/170 (44.71%), Query Frame = 1
Query:  523 YNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKFVVEHG 1032
            YN +    C NG  + AEK+  ++   G+  D  +Y  L+ G C  G+ + AY LL +M      P+L     ++DGL + G   +A + L +M +     P   T+ SV+    KR    E+  ++  M       N + + T V  L      +E   LI + + ++G
Sbjct:  433 YNPMFEYLCANGKTKQAEKVFRQLMKRGV-QDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYL-PVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQN-IDLSTQVVRLLFSSAQKEKAFLIVRLLYDNG 599          
BLAST of Vigun01g014600.2 vs. DB:Swiss
Match: PP281_ARATH (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 4.330e-35
Identity = 105/343 (30.61%), Postives = 165/343 (48.10%), Query Frame = 1
Query:  277 VQSGYRHSAYTYNKA----CKLLGIRQNPQIIRDVVLSYEAEGCLVNANMFREVLK-LCKEAQLAEEALWVLRKLEQ--------SFN---------------------IRA-----DTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKFVVEHGVSYGDCCSSLVI-SLIRIKKVEEATKLFMEML-SGDARPDTLASSLLLKELC 1182
            +Q GY    YTYN      CKL  +++  +++  ++       C  N   +  ++  LCKE Q+ EEA  + R L          +FN                     +R+     D   YN++I   C  G ++ A  +  +M L+G    +ITY  L++GFC A +   A  +   M VH  S N V  + ++DGLC+S  +E A +L+D+M   G   P+  TY S++  FC+ G   +A DI+  M ++GC  + VT  TL+  LC  GRVE A KL+ + +   G++      + VI  L R +K  EA  LF EML   +A PD ++  ++ + LC
Sbjct:  322 LQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI----TRDCSPNTVTYNTLISTLCKENQV-EEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ-KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL-RSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLC 657          

HSP 2 Score: 140.969 bits (354), Expect = 4.540e-35
Identity = 94/306 (30.72%), Postives = 156/306 (50.98%), Query Frame = 1
Query:  280 QSGYRHSAYTYNKA----CKLLGIRQNPQIIRDVVLSYEAEGCLVNANMFREVLK-LCKEAQLAEEALWVLRKLEQSFNIRADTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKFVVEHGVSYGDCCSSLVISLIRIKKVEEATKLFMEMLSGDARPDTLASSLLLKELC 1182
            Q G+    YT+N      CK   ++   +I+ DV+L    EG   +   +  V+  LCK  ++ +EA+ VL ++  + +   +TV YN +I   CK   +E A +L   ++  G+ PD+ T+ +L++G C       A  L + MR   C P+    + ++D LC  G ++ AL +L +ME  G C+ +V+TY ++I  FCK  +  EA +I D M+  G   N VT  TL+D LC   RVE+A +L+D+ ++E         +SL+    R   +++A  +   M S    PD +    L+  LC
Sbjct:  288 QDGFFPDQYTFNTLVNGLCKAGHVKHAIEIM-DVMLQ---EGYDPDVYTYNSVISGLCKLGEV-KEAVEVLDQM-ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG-CARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC 586          

HSP 3 Score: 122.865 bits (307), Expect = 5.487e-29
Identity = 83/311 (26.69%), Postives = 145/311 (46.62%), Query Frame = 1
Query:  358 IRDVVLSYEAEGCLVNANMFREVLKLCKEAQLAEEALWVLRKLEQSFNIRADTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSME-----------------------------------MALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKFVVEHGVSYGDCC-SSLVISLIRIKKVEEATKLFMEMLSGDARPDTLASSLLLKELC 1182
            IR+ ++ +      V+ N+   V   CKE ++ E+AL  ++++        D   +N ++   CK G ++ A ++   M   G  PD+ TY +++ G C  G  + A  +L  M    CSPN V  + ++  LC+   +E                                   +A+EL ++M   G C P+  TY  +I S C +G+  EAL++L +M+ SGC  + +T  TL+D  C   +  EA ++ D+  V HGVS      ++L+  L + ++VE+A +L  +M+    +PD    + LL   C
Sbjct:  246 IREQMVEFGCSWSNVSVNVI--VHGFCKEGRV-EDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG-CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEV-HGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFC 551          

HSP 4 Score: 122.865 bits (307), Expect = 6.614e-29
Identity = 90/314 (28.66%), Postives = 157/314 (50.00%), Query Frame = 1
Query:  268 WAGVQSGYRHSAYTYNKACKLLGIRQNPQIIRDVVLSYEAEGCLVNANMFREVLK-LCKEAQLAEEALWVLRKLEQSFNIRADTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCS-PNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKFVVEHGVSYGDCCS--SLVISLIRIKKVEEATKLFMEMLSGDARPDTLASSLLLKELCMKAQL 1197
            W   + G +   + YN+   LL    + +++          G   + + F  ++K LC+  QL   A+ +L  +  S+ +  D   +  V++   + GD++ A ++  +M   G     ++   +V GFC  GR E A + ++ M       P+    + +++GLC++G ++ A+E++D M + G   P+V TY SVI   CK G+  EA+++LD+M    C  N VT  TL+ +LC E +VEEA +L  + +   G+   D C+  SL+  L   +    A +LF EM S    PD    ++L+  LC K +L
Sbjct:  143 WMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQL-RPAILMLEDM-PSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEG-YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA-RVLTSKGI-LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451          

HSP 5 Score: 109.383 bits (272), Expect = 1.703e-24
Identity = 96/395 (24.30%), Postives = 185/395 (46.84%), Query Frame = 1
Query:   52 FPRCHALKTLPFSTHRMGMGMADTLCTH---LHQSSGSVENSLSKVKPELDSQCVIQVLNSCHPKQP--LLGVRFFVWAGVQSGYRHSAYTYNKACKLLGIRQNPQIIRDVVLSYEAEGCLVNANMFREVLKLCKEAQLAEEALWVLRKLEQSFNIRADTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRM-KASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKFVVEHGVSYGDCCSSLVISLIRIKKVEEATKLFMEMLSGDARPDTLASSLLLKELCMKAQLAFVKEAT 1218
            F  C  LK  PFS     +  A TL  H   L+ +  S   S +       S   +++L+S    QP     +R F  A  +  +      Y +    LG   +   ++ ++   ++  C +  + F  +++   + +L +E L V+  +   F ++ DT  YN ++ L      ++  E    +MS+ G+ PD+ T+  L++  C A +   A  +L+ M  +   P+    + ++ G    G ++ AL + ++M + G CS + V+   ++  FCK G+  +AL+ +  M    G   +  T  TLV+ LC  G V+ A +++D  + E         +S++  L ++ +V+EA ++  +M++ D  P+T+  + L+  LC + Q   V+EAT
Sbjct:    3 FSSC--LKFYPFS-----ISQAVTLTHHSFSLNLTPPSSTISFASPHSAALSSTDVKLLDSLR-SQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG-CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ---VEEAT 385          

HSP 6 Score: 88.5817 bits (218), Expect = 1.628e-17
Identity = 71/279 (25.45%), Postives = 128/279 (45.88%), Query Frame = 1
Query:  283 SGYRHSAYTYNKA----CKLLGIRQNPQIIRDVVLSYEAEGCLVNANMFREVLK-LCKEAQLAEEALWVLRKLEQSFNIRADTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCK-RGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKFVVEHGVSYGDCCSSLVISLIRIKKVEEA 1101
            SG   S  TYN      CK    R+  +I  ++    E  G   N+  +  ++  LCK  ++ + A  + + + +    + D   YN ++   C+ GDI+ A  +   M+ NG  PD++TY  L+ G C AGR E A  LL+ +++   +      + ++ GL R      A+ L  +M +  +  P+ V+Y  V +  C   G   EA+D L  +   G      +++ L + L      E   KL++  +V     + +   S+V  L++I+K ++A
Sbjct:  464 SGCARSVITYNTLIDGFCKANKTREAEEIFDEM----EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG--QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVN--MVMQKARFSEEEVSMVKGLLKIRKFQDA 734          
BLAST of Vigun01g014600.2 vs. DB:Swiss
Match: PP248_ARATH (Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22670 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 5.320e-35
Identity = 87/304 (28.62%), Postives = 162/304 (53.29%), Query Frame = 1
Query:  118 DTLCTHLHQSSGSVEN---SLSKVKPELDSQCVIQVLNS-CHPKQPLLGVRFFVWAGVQSGYRHSAYTYNKACKLLGIRQNPQIIRDVV--LSYEAEGCLVNANMFREVLKLCKEAQLAEEALWVLRKLEQSFNIRADTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLID 1011
            D +C  L++   S E+    LSK    +    V+QVL    +      G  FF+WA  Q+GY HS +TYN    +LG  +N  ++ ++V  ++   E  LV  +   +V++   ++    +A+    ++E+S+ ++ DT+  N ++    K   IE A ++  ++  + + PD  T+  L+ GFC A + + A +++ +M+V   +P++V  ++ ++  C+ G      E+L++M + G C+PNVVTYT V+ S  K  Q AEAL + ++MK  GC  +     +L+  L   GR ++A ++ +
Sbjct:  103 DKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYG--FFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKL-FDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENG-CNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFE 402          

HSP 2 Score: 63.5438 bits (153), Expect = 1.285e-9
Identity = 57/237 (24.05%), Postives = 94/237 (39.66%), Query Frame = 1
Query:  511 DTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSM-----------------------------------EMALELLDKME--KGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKFVVEHGVSYGDCCSSLVISLIRIKKVEEATKL 1110
            D V Y   +   CK GD     ++  EM  NG  P+++TY  ++     + +   A  + + M+   C P+    S+++  L ++G                                     EMAL LL +ME  +G  CSPNV TY  +++  C + +      +L  M  +    +  T   L+  LC+ G+VEEA    ++ V +  V     C  LV  L +    E   K+
Sbjct:  307 DVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKKNMAEAKLKI 543          
BLAST of Vigun01g014600.2 vs. DB:Swiss
Match: PPR94_ARATH (Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX=3702 GN=At1g62910 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.576e-33
Identity = 103/348 (29.60%), Postives = 167/348 (47.99%), Query Frame = 1
Query:  175 KVKPELDSQCVIQVLNS-CHPKQPLLGVRFFVWAGVQSGYRHSAYTYNKACKLLGIRQNPQIIRDVVLSYEAEGCLVNANMFREVLK-LCKEAQLAEEALWVLRKLEQSFNIRADTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLI----DKFVVEHGVSYGDCCSSLVISLIRIKKVEEATKLFMEMLSGDARPDTLASSLLLKELCMKAQLA 1200
            K+  E D   +  +LN  CH K+    V   V   V+ GY+   +T+      L +         +V      GC  +   +  V+  LCK   + + AL +L+K+E+   I AD V+YN +I   CK   ++ A  L  EM   G+ PD+ TY +L+   C+ GR   A  LL  M   + +PN+V  SA++D   + G +  A +L D+M K     P++ TY+S+I  FC   +  EA  + + M +  C  N VT  TL+   C   RVEE  +L      + +V + V+Y    ++L+    + +  + A  +F +M+S    P+ L  ++LL  LC   +LA
Sbjct:  146 KLGYEPDIVTLSSLLNGYCHSKRISDAVAL-VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI-DLALSLLKKMEKG-KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS-IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY----TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLA 485          

HSP 2 Score: 105.145 bits (261), Expect = 4.880e-23
Identity = 72/271 (26.57%), Postives = 118/271 (43.54%), Query Frame = 1
Query:  490 QSFNIRADTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVM----------------------------------RVHR-CSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKFVVEHGVSYGDCCSSLVISLIRIKKVEEATKLFMEMLSGDARPDTLASSLLLKELCMKAQL 1197
            Q+  I  D   Y++ I   C+   +  A  +  +M   G  PD++T  +L+ G+C + R   A +L+  M                                   V R C P+LV    +++GLC+ G +++AL LL KMEK G    +VV Y ++I   CK     +AL++   M   G   +  T  +L+  LC  GR  +A +L+   +           S+L+ + ++  K+ EA KL+ EM+     PD    S L+   CM  +L
Sbjct:  110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEK-GKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 379          

HSP 3 Score: 95.5153 bits (236), Expect = 7.128e-20
Identity = 66/224 (29.46%), Postives = 112/224 (50.00%), Query Frame = 1
Query:  517 VMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKFVVEHGVSYGDCC--SSLVISLIRIKKVEEATKLFMEMLSGDARPDTLASSLLLKELC 1182
            V +N ++    K    E    L  +M   G+  DL TY   +  FC   +   A ++L  M      P++V LS++L+G C S  +  A+ L+D+M + G   P+  T+T++I       + +EA+ ++D+M   GC  + VT  T+V+ LC  G ++ A  L+ K  +E G    D    ++++  L + K +++A  LF EM +   RPD    S L+  LC
Sbjct:   84 VEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKK--MEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304          

HSP 4 Score: 92.8189 bits (229), Expect = 5.406e-19
Identity = 58/223 (26.01%), Postives = 110/223 (49.33%), Query Frame = 1
Query:  511 DTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKFVVEHGVSYGDCCSSLVISLIRIKKVEEATKLFMEM----LSGDARPDTLASSLL 1167
            + V Y+ +I+  CK   +E   +L  EMS  GL  + +TY  L+ GF  A   ++A  + K M      PN++  + +LDGLC++G +  A+ + + +++     P++ TY  +I+  CK G+  +  ++   +   G   N +   T++   C +G  EEA  L+ K   +  +      ++L+ + +R    E + +L  EM     +GDA    L +++L
Sbjct:  397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR-STMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 618          

HSP 5 Score: 90.8929 bits (224), Expect = 2.157e-18
Identity = 55/226 (24.34%), Postives = 116/226 (51.33%), Query Frame = 1
Query:  322 CKLLGIRQNPQIIRDVVLSYEAEGCLVNANMFREVLKLCKEAQLAEEALWVLRKLEQSFNIRADTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAY 999
            CK   + +  ++ R++       G + N   +  ++    +A+  + A  V +++  S  +  + + YN+++   CKNG +  A  +   +  + + PD+ TY  ++EG C AG+ E  + L   + +   SPN++  + ++ G CR GS E A  LL KM++ G   PN  TY ++I++  + G    + +++  M++ G  A   +   LV ++  +GR+++++
Sbjct:  409 CKAKRVEEGMELFREM----SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM-VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL-PNSGTYNTLIRARLRDGDREASAELIKEMRSCG-FAGDASTIGLVTNMLHDGRLDKSF 627          
BLAST of Vigun01g014600.2 vs. DB:Swiss
Match: PP247_ARATH (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.607e-33
Identity = 83/260 (31.92%), Postives = 138/260 (53.08%), Query Frame = 1
Query:  430 KLCKEAQLAEEALWVLRKLEQSFNIRADTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLI----DKFVVEHGVSYGDCCSSLVISLIRIKKVEEATKLFMEMLSGDARPDTLASSLLLKELCMKAQL 1197
            +LCK    A  AL + RK+E+  NI+A  V Y++VI   CK+G  + A  L  EM + G+  D++TY +L+ G C+ G+ +    +L+ M      P++V  SA++D   + G +  A EL ++M   G  +P+ +TY S+I  FCK     EA  + D M + GC  + VT   L++S C   RV++  +L      K ++ + ++Y    ++LV+   +  K+  A +LF EM+S    P  +   +LL  LC   +L
Sbjct:  219 RLCKSGNSAL-ALDLFRKMEER-NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG-IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY----NTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGEL 471          

HSP 2 Score: 106.686 bits (265), Expect = 1.186e-23
Identity = 62/235 (26.38%), Postives = 121/235 (51.49%), Query Frame = 1
Query:  499 NIRADTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKFVVEHGVSYGDCCSSLVI-SLIRIKKVEEATKLFMEMLSGDARPDTLASSLLLKELCMKAQLA 1200
            NI  D V ++ +I +  K G +  A++L  EM   G+ PD ITY +L++GFC       A  +  +M    C P++V  S +++  C++  ++  + L  ++   G   PN +TY +++  FC+ G+   A ++   M + G   + VT   L+D LC  G + +A ++ +K + +  ++ G    +++I  +    KV++A  LF  +     +PD +  ++++  LC K  L+
Sbjct:  310 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG-LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK-MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS 542          

HSP 3 Score: 106.686 bits (265), Expect = 1.388e-23
Identity = 75/241 (31.12%), Postives = 117/241 (48.55%), Query Frame = 1
Query:  502 IRADTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLID----KFVVEHGVSYGDCCSSLVISLIRIKKVEEATKLFMEMLSGDARPDTLASSLLLKELCMKAQLAFVKE 1212
            I  D     ++I   C+   +  A  + G     G  PD IT+  LV GFC  GR   A +L+  M   +  P+LV +S +++GLC  G +  AL L+D+M + G   P+ VTY  V+   CK G  A ALD+  +M+     A+ V    ++DSLC +G  ++A  L +    K +    V+Y    SSL+  L    K ++  K+  EM+  +  PD +  S L+     + +L   KE
Sbjct:  101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG-FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY----SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKE 336          

HSP 4 Score: 94.3597 bits (233), Expect = 1.680e-19
Identity = 68/240 (28.33%), Postives = 113/240 (47.08%), Query Frame = 1
Query:  511 DTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKG--------------GDCS--------------------PNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKFVVEHGVSYGDCCSSLVISLIRIKKVEEATKLFMEMLS 1128
            D V Y+++I   CK   ++   +L  E+S  GL P+ ITY  LV GFC +G+   A  L + M      P++V    +LDGLC +G +  ALE+ +KM+K               G C+                    P+VVTY  +I   CK+G  +EA  +  +MK  GC  +  T   L+ +      +  + +LI++  V  G S       +VI ++  ++++++   F++MLS
Sbjct:  384 DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKV-CGFSADSSTIKMVIDMLSDRRLDKS---FLDMLS 619          

HSP 5 Score: 73.559 bits (179), Expect = 8.338e-13
Identity = 53/223 (23.77%), Postives = 108/223 (48.43%), Query Frame = 1
Query:  436 CKEAQLAEEALWVLRKLEQSFNIRADTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHR----------------------------CS-------PNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAY 999
            CK A+  ++ + + R++  S  +  +T+ YN ++   C++G +  A++L  EM   G+ P ++TY  L++G CD G    A  + + M+  R                            CS       P++V  + ++ GLC+ GS+  A  L  KM++ G C+P+  TY  +I++         ++++++ MK  G  A+  T+  ++D L  + R+++++
Sbjct:  396 CK-AKRVDDGMRLFREI-SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG-CTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLS-DRRLDKSF 614          
BLAST of Vigun01g014600.2 vs. DB:Swiss
Match: PPR28_ARATH (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.264e-32
Identity = 79/254 (31.10%), Postives = 134/254 (52.76%), Query Frame = 1
Query:  433 LCKEAQLAEEALWVLRKLEQSFNIRADTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKFVVEHGVSYGDCCSSLVISLIRIKKVEEATKLFMEMLSGDARPDTLASSLLLKELCMKAQ 1194
            +CKE +L +EA+  L  +  S   + + + +N+++R  C  G    AEKL  +M   G  P ++T+  L+   C  G    A  +L+ M  H C PN +  + +L G C+   M+ A+E L++M   G C P++VTY +++ + CK G+  +A++IL+++ + GC    +T  T++D L   G+  +A KL+D+   +         SSLV  L R  KV+EA K F E      RP+ +  + ++  LC   Q
Sbjct:  284 ICKEGRL-DEAIKFLNDMPSS-GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG-CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQ 534          

HSP 2 Score: 124.405 bits (311), Expect = 1.331e-29
Identity = 84/299 (28.09%), Postives = 150/299 (50.17%), Query Frame = 1
Query:  316 KACKLLGIRQNPQIIRDVVLSYEAEGCLVNANMFREVLKLCKEAQLAEEALWVLRKLEQSFNIRADTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKFVVEHG-----VSYGDCCSSLVISLIRIKKVEEATKLFMEMLSGDARPDTLASSLLLKELCMKAQL 1197
            KA K+L I +    + DV+ +Y              +   CK  ++   AL VL ++    ++  D V YN ++R  C +G ++ A ++   M     YPD+ITY  L+E  C      HA  LL  MR   C+P++V  + +++G+C+ G ++ A++ L+ M   G C PNV+T+  +++S C  G+W +A  +L  M   G   + VT   L++ LC +G +  A  +++K + +HG     +SY    + L+    + KK++ A +    M+S    PD +  + +L  LC   ++
Sbjct:  155 KAAKILEILEGSGAVPDVI-TYNVM-----------ISGYCKAGEI-NNALSVLDRM----SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG-CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEK-MPQHGCQPNSLSY----NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430          

HSP 3 Score: 114.775 bits (286), Expect = 2.102e-26
Identity = 73/282 (25.89%), Postives = 144/282 (51.06%), Query Frame = 1
Query:  385 AEGCLVNANMFREVLK-LCKEAQLAEEALWVLRKLEQSFNIRADTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKF----VVEHGVSYGDCCSSLVISLIRIKKVEEATKLFMEMLSGDARPDTLASSLLLKELCMKAQLAFVKEA 1215
            + GC  N      +L+ +C   +  +    +   L + F+     V +N++I   C+ G +  A  +  +M  +G  P+ ++Y  L+ GFC   + + A   L+ M    C P++V  + +L  LC+ G +E A+E+L+++   G CSP ++TY +VI    K G+  +A+ +LD M+A     + +T  +LV  L  EG+V+EA K   +F    +  + V++    +S+++ L + ++ + A    + M++   +P+  + ++L++ L   A     KEA
Sbjct:  302 SSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS--PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG-CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTF----NSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGL---AYEGMAKEA 573          

HSP 4 Score: 113.62 bits (283), Expect = 5.281e-26
Identity = 63/232 (27.16%), Postives = 121/232 (52.16%), Query Frame = 1
Query:  511 DTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKF--------VVEHGVSYGDCCSSLVISLIRIKKVEEATKLFMEMLSGDARPDTLASSLLLKELC 1182
            + V  N  +R   + G++E   K    M  +G  PD+I    L+ GFC  G+   A  +L+++      P+++  + ++ G C++G +  AL +LD+M      SP+VVTY ++++S C  G+  +A+++LDRM    C+ + +T   L+++ C +  V  A KL+D+         VV + V        LV  + +  +++EA K   +M S   +P+ +  +++L+ +C
Sbjct:  101 EDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS----VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV--------LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320          

HSP 5 Score: 111.309 bits (277), Expect = 3.225e-25
Identity = 71/248 (28.63%), Postives = 122/248 (49.19%), Query Frame = 1
Query:  277 VQSGYRHSAYTYNKACKLLGIRQNPQIIRDVVLSYEAEGCLVNANMFREVLK-LCKEAQLAEEALWVLRKLEQSFNIRADTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILDGLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKF 1017
            ++ G+  S  T+N     L  +       D++      GC  N+  +  +L   CKE ++ + A+  L ++  S     D V YN ++   CK+G +E A ++  ++S  G  P LITY  +++G   AG+   A  LL  MR     P+ +  S+++ GL R G ++ A++   + E+ G   PN VT+ S++   CK  Q   A+D L  M   GC  N  +   L++ L  EG  +EA +L+++ 
Sbjct:  336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKM-DRAIEYLERM-VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG-IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580          
The following BLAST results are available for this feature:
BLAST of Vigun01g014600.2 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
PP422_ARATH4.654e-10648.75Pentatricopeptide repeat-containing protein At5g47... [more]
PPR39_ARATH4.000e-4235.14Pentatricopeptide repeat-containing protein At1g12... [more]
PPR36_ARATH8.099e-3831.37Pentatricopeptide repeat-containing protein At1g12... [more]
PPR37_ARATH1.378e-3735.47Pentatricopeptide repeat-containing protein At1g12... [more]
PPR2_ARATH4.106e-3627.74Pentatricopeptide repeat-containing protein At1g02... [more]
PP281_ARATH4.330e-3530.61Pentatricopeptide repeat-containing protein At3g53... [more]
PP248_ARATH5.320e-3528.62Pentatricopeptide repeat-containing protein At3g22... [more]
PPR94_ARATH1.576e-3329.60Pentatricopeptide repeat-containing protein At1g62... [more]
PP247_ARATH4.607e-3331.92Pentatricopeptide repeat-containing protein At3g22... [more]
PPR28_ARATH1.264e-3231.10Pentatricopeptide repeat-containing protein At1g09... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 276..324
e-value: 2.4E-13
score: 50.1
coord: 171..219
e-value: 4.7E-12
score: 45.9
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 238..269
e-value: 1.2E-7
score: 31.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 351..376
e-value: 0.097
score: 13.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 279..312
e-value: 5.7E-10
score: 36.8
coord: 246..278
e-value: 1.8E-6
score: 25.7
coord: 173..206
e-value: 1.7E-8
score: 32.1
coord: 208..241
e-value: 2.1E-6
score: 25.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 206..240
score: 11.356
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 241..275
score: 9.942
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 277..311
score: 13.066
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 171..205
score: 11.937
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 351..381
score: 6.138
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 135..165
score: 5.667
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 312..347
score: 7.947
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 43..198
e-value: 2.7E-16
score: 61.6
coord: 199..269
e-value: 1.2E-18
score: 69.3
coord: 270..342
e-value: 4.1E-21
score: 77.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 278..376

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun01g014600.2_Vu_IT97K-499-35_v1.1 ID=Vigun01g014600.2_Vu_IT97K-499-35_v1.1; Name=Vigun01g014600.2; organism=Vigna unguiculata; type=mRNA; length=1879bp
AAAACAAGGGAACTTGTAATCGTGAAACCCCCCATCTCACATTTCTCTCT
TCCCCTTTCTCCAGTCCCAATTTCAGCTTCCATTGTCACCACCAATAAGC
TCCAAAGGAGAGGTGTGGTAGGAAAATATGTTAATACCCCAATTTCTGTC
AGCAAATTTTGGAAGCCTAGGGTTCATGTGGGGTGCTTTCACAAAGGATT
GCACGCCAAATTGATATCTTATGCAAAACTATGTATGTATCACACTATGT
TTATGTTTATGCCCCAATTTGTAAATTTTCGGCTTTTTCCGCGCTGCCAT
GCCCTCAAAACCCTTCCTTTCTCCACCCACCGAATGGGCATGGGCATGGC
CGATACCCTCTGTACCCATCTCCACCAAAGCAGTGGCAGTGTCGAGAACT
CATTGTCCAAGGTTAAGCCTGAACTCGATTCTCAATGTGTCATTCAAGTC
CTCAACTCATGTCATCCCAAGCAACCTCTATTGGGTGTCAGATTTTTCGT
TTGGGCTGGAGTTCAATCTGGCTACAGGCACAGTGCTTACACGTACAACA
AAGCTTGCAAATTGCTAGGGATTCGGCAAAATCCCCAAATTATTCGTGAT
GTCGTTCTGTCTTATGAGGCCGAAGGGTGTTTAGTCAATGCCAACATGTT
CAGGGAGGTTCTGAAGCTGTGCAAAGAAGCTCAACTAGCTGAAGAGGCAT
TGTGGGTGTTGAGGAAGTTGGAGCAGAGTTTCAACATCCGTGCTGACACG
GTGATGTATAATGTGGTTATTAGGCTGTGTTGCAAGAATGGCGACATTGA
AACGGCTGAGAAGTTGACCGGGGAGATGAGTTTGAACGGTCTTTACCCTG
ATCTTATTACGTACATGGCACTAGTGGAGGGATTCTGTGATGCTGGTCGT
CCAGAGCATGCTTATTCTTTGCTTAAGGTTATGAGAGTGCATAGATGTTC
ACCCAATTTGGTCCTTTTATCAGCCATTTTAGACGGCTTGTGTAGGTCTG
GATCCATGGAAATGGCATTGGAGTTGTTGGATAAAATGGAGAAAGGTGGG
GATTGCAGTCCAAATGTTGTTACTTATACATCTGTGATTCAAAGTTTCTG
TAAGAGAGGTCAATGGGCGGAAGCATTGGATATTCTGGATAGAATGAAAG
CTTCGGGGTGCCATGCAAACCATGTTACTGTCTTTACTTTGGTTGATAGC
CTTTGTGTTGAGGGTCGTGTGGAAGAAGCTTACAAGTTGATTGATAAGTT
TGTGGTCGAACATGGTGTTTCTTATGGTGATTGTTGCAGTTCACTTGTGA
TTTCATTGATAAGGATTAAAAAGGTGGAAGAAGCAACGAAGCTATTCATG
GAAATGCTTTCTGGTGATGCCAGACCTGATACTTTGGCATCTAGCCTTTT
GCTAAAGGAGCTTTGTATGAAGGCCCAGTTGGCCTTTGTCAAAGAAGCCA
CCTGACGGAGGCCACAAAGCTGGCCAAGATAATGCTTAAGAAATCAGTTT
CGCTAAAACCTCCGTACAAAGATGGTGCAATCGATATCCTAATAGAATCT
GGAGAAAAAGATCTTGTGAACCAGTTGACTGGCATTCGTAAGGGACTTTG
ATGATAAAATGCCTTGTGAAGGAGGTCACGTCCATTGTTCTCTGCCACCT
CTGGTCATAAGTTTGCATTGTATAACAGCAACAGTAAGAATTGATTTCCG
TGATGTAGTCTGCTGGTACTTTCTTTATTTCTTCCCCTTGTAGGAGAATG
TATTCTTGAGAAACAGTATGCTTGTCTTTATCTGTGTTTGCTAAACCCTT
TCTTTCTCTTGTAGATTCCTTTTAATATCGATGAGTTGGCAAACCCATTT
TCCTCATACAAATTAGTGAAACTTCTTTT
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protein sequence of Vigun01g014600.2_Vu_IT97K-499-35_v1.1

>Vigun01g014600.2_Vu_IT97K-499-35_v1.1 ID=Vigun01g014600.2_Vu_IT97K-499-35_v1.1; Name=Vigun01g014600.2_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=407bp
MYHTMFMFMPQFVNFRLFPRCHALKTLPFSTHRMGMGMADTLCTHLHQSS
GSVENSLSKVKPELDSQCVIQVLNSCHPKQPLLGVRFFVWAGVQSGYRHS
AYTYNKACKLLGIRQNPQIIRDVVLSYEAEGCLVNANMFREVLKLCKEAQ
LAEEALWVLRKLEQSFNIRADTVMYNVVIRLCCKNGDIETAEKLTGEMSL
NGLYPDLITYMALVEGFCDAGRPEHAYSLLKVMRVHRCSPNLVLLSAILD
GLCRSGSMEMALELLDKMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDI
LDRMKASGCHANHVTVFTLVDSLCVEGRVEEAYKLIDKFVVEHGVSYGDC
CSSLVISLIRIKKVEEATKLFMEMLSGDARPDTLASSLLLKELCMKAQLA
FVKEAT*
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mRNA from alignment at Vu01:1616366..1618332-

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun01g014600.2_Vu_IT97K-499-35_v1.1 ID=Vigun01g014600.2_Vu_IT97K-499-35_v1.1; Name=Vigun01g014600.2; organism=Vigna unguiculata; type=mRNA; length=1967bp; location=Sequence derived from: Vu01:1616366..1618332- (Vigna unguiculata
AAAACAAGGGAACTTGTAATCGTGAAACCCCCCATCTCACATTTCTCTCT TCCCCTTTCTCCAGTCCCAATTTCAGCTTCCATTGTCACCACCAATAAGC TCCAAAGGAGAGGTGTGGTAGGAAAATATGTTAATACCCCAATTTCTGTC AGCAAATTTTGGAAGCCTAGGGTTCATGTGGGGTGCTTTCACAAAGGATT GCACGCCAAATTGATATCTTATGCAAAACTATGTATGTATCACACTATGT TTATGTTTATGCCCCAATTTGTAAATTTTCGGCTTTTTCCGCGCTGCCAT GCCCTCAAAACCCTTCCTTTCTCCACCCACCGAATGGGCATGGGCATGGC CGATACCCTCTGTACCCATCTCCACCAAAGCAGTGGCAGTGTCGAGAACT CATTGTCCAAGGTTAAGCCTGAACTCGATTCTCAATGTGTCATTCAAGTC CTCAACTCATGTCATCCCAAGCAACCTCTATTGGGTGTCAGATTTTTCGT TTGGGCTGGAGTTCAATCTGGCTACAGGCACAGTGCTTACACGTACAACA AAGCTTGCAAATTGCTAGGGATTCGGCAAAATCCCCAAATTATTCGTGAT GTCGTTCTGTCTTATGAGGCCGAAGGGTGTTTAGTCAATGCCAACATGTT CAGGGAGGTTCTGAAGCTGTGCAAAGAAGCTCAACTAGCTGAAGAGGCAT TGTGGGTGTTGAGGAAGTTGGAGCAGAGTTTCAACATCCGTGCTGACACG GTGATGTATAATGTGGTTATTAGGCTGTGTTGCAAGAATGGCGACATTGA AACGGCTGAGAAGTTGACCGGGGAGATGAGTTTGAACGGTCTTTACCCTG ATCTTATTACGTACATGGCACTAGTGGAGGGATTCTGTGATGCTGGTCGT CCAGAGCATGCTTATTCTTTGCTTAAGGTTATGAGAGTGCATAGATGTTC ACCCAATTTGGTCCTTTTATCAGCCATTTTAGACGGCTTGTGTAGGTCTG GATCCATGGAAATGGCATTGGAGTTGTTGGATAAAATGGAGAAAGGTGGG GATTGCAGTCCAAATGTTGTTACTTATACATCTGTGATTCAAAGTTTCTG TAAGAGAGGTCAATGGGCGGAAGCATTGGATATTCTGGATAGAATGAAAG CTTCGGGGTGCCATGCAAACCATGTTACTGTCTTTACTTTGGTTGATAGC CTTTGTGTTGAGGGTCGTGTGGAAGAAGCTTACAAGTTGATTGATAAGTT TGTGGTCGAACATGGTGTTTCTTATGGTGATTGTTGCAGTTCACTTGTGA TTTCATTGATAAGGATTAAAAAGGTGGAAGAAGCAACGAAGCTATTCATG GAAATGCTTTCTGGTGATGCCAGACCTGATACTTTGGCATCTAGCCTTTT GCTAAAGGAGCTTTGTATGAAGGCCCAGGTATTGGATGGATTCTACTTGC TTGAAGCAATTGAGAACAAGGGATGTTTGTCCGCCATTGACTCTGGTATT TATTCTATTCTTTTAGTTGGCCTTTGTCAAAGAAGCCACCTGACGGAGGC CACAAAGCTGGCCAAGATAATGCTTAAGAAATCAGTTTCGCTAAAACCTC CGTACAAAGATGGTGCAATCGATATCCTAATAGAATCTGGAGAAAAAGAT CTTGTGAACCAGTTGACTGGCATTCGTAAGGGACTTTGATGATAAAATGC CTTGTGAAGGAGGTCACGTCCATTGTTCTCTGCCACCTCTGGTCATAAGT TTGCATTGTATAACAGCAACAGTAAGAATTGATTTCCGTGATGTAGTCTG CTGGTACTTTCTTTATTTCTTCCCCTTGTAGGAGAATGTATTCTTGAGAA ACAGTATGCTTGTCTTTATCTGTGTTTGCTAAACCCTTTCTTTCTCTTGT AGATTCCTTTTAATATCGATGAGTTGGCAAACCCATTTTCCTCATACAAA TTAGTGAAACTTCTTTT
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Coding sequence (CDS) from alignment at Vu01:1616366..1618332-

>Vigun01g014600.2_Vu_IT97K-499-35_v1.1 ID=Vigun01g014600.2_Vu_IT97K-499-35_v1.1; Name=Vigun01g014600.2; organism=Vigna unguiculata; type=CDS; length=1221bp; location=Sequence derived from: Vu01:1616366..1618332- (Vigna unguiculata
ATGTATCACACTATGTTTATGTTTATGCCCCAATTTGTAAATTTTCGGCT
TTTTCCGCGCTGCCATGCCCTCAAAACCCTTCCTTTCTCCACCCACCGAA
TGGGCATGGGCATGGCCGATACCCTCTGTACCCATCTCCACCAAAGCAGT
GGCAGTGTCGAGAACTCATTGTCCAAGGTTAAGCCTGAACTCGATTCTCA
ATGTGTCATTCAAGTCCTCAACTCATGTCATCCCAAGCAACCTCTATTGG
GTGTCAGATTTTTCGTTTGGGCTGGAGTTCAATCTGGCTACAGGCACAGT
GCTTACACGTACAACAAAGCTTGCAAATTGCTAGGGATTCGGCAAAATCC
CCAAATTATTCGTGATGTCGTTCTGTCTTATGAGGCCGAAGGGTGTTTAG
TCAATGCCAACATGTTCAGGGAGGTTCTGAAGCTGTGCAAAGAAGCTCAA
CTAGCTGAAGAGGCATTGTGGGTGTTGAGGAAGTTGGAGCAGAGTTTCAA
CATCCGTGCTGACACGGTGATGTATAATGTGGTTATTAGGCTGTGTTGCA
AGAATGGCGACATTGAAACGGCTGAGAAGTTGACCGGGGAGATGAGTTTG
AACGGTCTTTACCCTGATCTTATTACGTACATGGCACTAGTGGAGGGATT
CTGTGATGCTGGTCGTCCAGAGCATGCTTATTCTTTGCTTAAGGTTATGA
GAGTGCATAGATGTTCACCCAATTTGGTCCTTTTATCAGCCATTTTAGAC
GGCTTGTGTAGGTCTGGATCCATGGAAATGGCATTGGAGTTGTTGGATAA
AATGGAGAAAGGTGGGGATTGCAGTCCAAATGTTGTTACTTATACATCTG
TGATTCAAAGTTTCTGTAAGAGAGGTCAATGGGCGGAAGCATTGGATATT
CTGGATAGAATGAAAGCTTCGGGGTGCCATGCAAACCATGTTACTGTCTT
TACTTTGGTTGATAGCCTTTGTGTTGAGGGTCGTGTGGAAGAAGCTTACA
AGTTGATTGATAAGTTTGTGGTCGAACATGGTGTTTCTTATGGTGATTGT
TGCAGTTCACTTGTGATTTCATTGATAAGGATTAAAAAGGTGGAAGAAGC
AACGAAGCTATTCATGGAAATGCTTTCTGGTGATGCCAGACCTGATACTT
TGGCATCTAGCCTTTTGCTAAAGGAGCTTTGTATGAAGGCCCAGTTGGCC
TTTGTCAAAGAAGCCACCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_rpt
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding