Vigun01g026500.1

Transcript Overview
NameVigun01g026500.1
Unique NameVigun01g026500.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length1662
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu01supercontigVu01:3118705..3121147 -Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun01g026500Vigun01g026500_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g026500.1_Vu_IT97K-499-35_v1.1Vigun01g026500.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide
Vigun01g026500.1Vigun01g026500.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g026500.1.v1.1.CDS.2Vigun01g026500.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g026500.1.v1.1.CDS.1Vigun01g026500.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g026500.1.v1.1.three_prime_UTR.1Vigun01g026500.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g026500.1.v1.1.five_prime_UTR.2Vigun01g026500.1.v1.1.five_prime_UTR.2_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR
Vigun01g026500.1.v1.1.five_prime_UTR.1Vigun01g026500.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


Homology
BLAST of Vigun01g026500.1 vs. DB:Swiss
Match: TMVRN_NICGU (TMV resistance protein N OS=Nicotiana glutinosa OX=35889 GN=N PE=1 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 4.736e-79
Identity = 164/433 (37.88%), Postives = 252/433 (58.20%), Query Frame = 1
Query:  133 YDVFVSFRVEDIRHTLLSHLIGAFQRKKICAFID-AELQRGHEIGPSLFQAIERSDILLIIFSPHYASSHWCLEELEKILECRDKYERTVIPVFYNVQPTDVRHQLRTYENAFVEHELNYQNKV---QIWKDALKHSADLSGIDSSKFPCDFELVEEIATVVLKGLAK-PLVVAKELVGIDEKIATIESWIKKDSKGTCLIGIWGMGGIGKTTLAEEVFNKLHSEYEACY------FLAHEREESNKHGIISLKEKIFSELLGCEVKIYTQNSLPGHIARRISRMKVLIVLDDVNNSDH-IKNLLGDFGNFGSGSTIIVTTRNEQVLKTNKVDETYQLTKLSFNEALELF-HLLVGKQNDNQREYNELCERVVHYAQGIPLVLKVLAGHLRGNKKEVWESELDKLKGMPHKEVYDVMTWSFYDLDRKQQQIFL 1392
            YDVF+SFR ED R T  SHL      K I  F D   L+ G  I   L +AIE S   +++FS +YA+S WCL EL KI+EC+ ++++TVIP+FY+V P+ VR+Q  ++  AF EHE  Y++ V   Q W+ AL  +A+L G   ++   D + + +I   +   L K  L   + +VGID  +  IES ++    G  ++GIWGMGG+GKTT+A  +F+ L    ++ Y      FL   +E  NK G+ SL+  + SELL  +     +      +A R+   KVLIVLDD++N DH ++ L GD   FG+GS II+TTR++ +++ N  D  Y++T L  +E+++LF     GK+  N+  + +L   VV+YA+G+PL LKV    L   +   W+S ++ +K   +  + D +  S+  L+ KQQ++FL
Sbjct:   12 YDVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELCKAIEESQFAIVVFSENYATSRWCLNELVKIMECKTRFKQTVIPIFYDVDPSHVRNQKESFAKAFEEHETKYKDDVEGIQRWRIALNEAANLKGSCDNRDKTDADCIRQIVDQISSKLCKISLSYLQNIVGIDTHLEKIESLLEIGINGVRIMGIWGMGGVGKTTIARAIFDTLLGRMDSSYQFDGACFLKDIKE--NKRGMHSLQNALLSELLREKANYNNEEDGKHQMASRLRSKKVLIVLDDIDNKDHYLEYLAGDLDWFGNGSRIIITTRDKHLIEKN--DIIYEVTALPDHESIQLFKQHAFGKEVPNE-NFEKLSLEVVNYAKGLPLALKVWGSLLHNLRLTEWKSAIEHMKNNSYSGIIDKLKISYDGLEPKQQEMFL 439          
BLAST of Vigun01g026500.1 vs. DB:Swiss
Match: DSC1_ARATH (Disease resistance-like protein DSC1 OS=Arabidopsis thaliana OX=3702 GN=DSC1 PE=1 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 1.356e-72
Identity = 162/443 (36.57%), Postives = 255/443 (57.56%), Query Frame = 1
Query:  109 ENNTPQ-IKYDVFVSFRVEDIRHTLLSHLIGAFQRKKICAFIDAELQRGHEIGPSLFQAIERSDILLIIFSPHYASSHWCLEELEKILECRDKYERTVIPVFYNVQPTDVRHQLRTYENAFVEHELNYQN----KVQIWKDALKHSADLSG-----IDSSKFPCDFELVEEIATVVLKGLAKPLVVAKE-LVGIDEKIATIE---SWIKKDSKGTCLIGIWGMGGIGKTTLAEEVFNKLHSEYEACYFLAHEREESNKHGIISLKEKIFSELLGC-EVKIYTQNSLPGHIARRISRMKVLIVLDDVNNSDHIKNLLGDFGNFGSGSTIIVTTRNEQVLKTNKVDETYQLTKLSFNEALELFHLLVGKQNDNQREYNELCERVVHYAQGIPLVLKVLAGHLRGNKKEVWESELDKLKGMPHKEVYDVMTWSFYDLDRKQQQIFL 1392
            E+++P   ++DVF+SFR  D R+    HL  A + + I +FID  L+RG  +  +LF  IE+S I +I+FS +YA+S WCL EL KILECR+  ++ V+P+FY V  +DV  Q  ++   F   EL +      ++  WK AL  ++++ G     I +S    + +LV+EIA    K L        E LVGI+ ++  +E   SW  +D     +IGI GM GIGKTTLA+ ++ ++  +++   FL + RE S + G+ SL +K+FS +L   +++I    +      RR+   ++LIVLDDVN+   I+ L+G    +  GS II+TTR+ ++++T K    Y L KL+  EAL+LF L     +   +E+  L   V+ YA+G PL LKVL   L       WE++LD+LK   H ++Y+V+  S+ +L  +Q+ +FL
Sbjct:    2 ESSSPSSAEFDVFLSFRGFDTRNNFTGHLQKALRLRGIDSFIDDRLRRGDNL-TALFDRIEKSKIAIIVFSTNYANSAWCLRELVKILECRNSNQQLVVPIFYKVDKSDVEKQRNSFAVPFKLPELTFPGVTPEEISSWKAALASASNILGYVVKEISTS----EAKLVDEIAVDTFKKLNDLAPSGNEGLVGIESRLKNLEKLLSW--EDLDTVHIIGIVGMVGIGKTTLADCLYGRMRGQFDGSCFLTNIRENSGRSGLESLLQKLFSTVLNDRDLEIGAPGNAHERFERRLKSKRLLIVLDDVNDEKQIRYLMGHCKWYQGGSRIIITTRDSKLIETIK-GRKYVLPKLNDREALKLFSLNAFSNSFPLKEFEGLTNMVLDYAKGHPLALKVLGSDLCERDDLYWEAKLDRLKSRSHGDIYEVLETSYEELTTEQKNVFL 436          
BLAST of Vigun01g026500.1 vs. DB:Swiss
Match: Y4117_ARATH (Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana OX=3702 GN=At4g11170 PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 3.307e-69
Identity = 154/438 (35.16%), Postives = 242/438 (55.25%), Query Frame = 1
Query:  103 SSENNTPQIKYDVFVSFRVEDIRHTLLSHLIGAFQRKKICAFIDAELQRGHEIGPSLFQAIERSDILLIIFSPHYASSHWCLEELEKILECRDKYERTVIPVFYNVQPTDVRHQLRTYENAFVEHELNYQNKVQ-IWKDALKHSADLSGIDSSKFPCDFELVEEIATVVLKGL-AKPLVVAKELVGIDEKIATIESWIKKDSKGTCLIGIWGMGGIGKTTLAEEVFNKLHSEYEACYFLAHEREESNKHGI------ISLKEKIFSELLGCEVKIYTQNSLPGHIARRISRMKVLIVLDDVNNSDHIKNLLGDFGNFGSGSTIIVTTRNEQVLKTNKVDETYQLTKLSFNEALELFHLLVGKQNDNQREYNELCERVVHYAQGIPLVLKVLAGHLRGNKKEVWESELDKLKGMPHKEVYDVMTWSFYDLDRKQQQIFL 1392
            SS +N+   +YDVF SFR ED+R+  LSHL+  F+ K I  F D  ++R H IG  L  AI  S I +++FS +YASS WCL+EL +I++C+++    V+PVFY V P+D+R Q   +  +F+E       + Q  W+ AL  +A++ G     +  +   +  I+  VL+ L A P     +LVG++  IA +ES +  +S+G  ++GIWG  G+GKTT+A  ++N+ H  +    F+ + RE   + G+      + L+++  S+LL  + K      L G I  R+   KVLI+LDDV+N + +K L  +   FG+ S I+VTT+N+Q+L ++ ++  YQ+   S  EAL +F     KQ+    +   L       A  +PL L+VL   +RG  KE WE  L  LK     EV  V+   +  L   ++ +FL
Sbjct:    3 SSSSNS--WRYDVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDDHIKRSHTIGHELRAAIRESKISVVLFSENYASSSWCLDELIEIMKCKEEQGLKVMPVFYKVDPSDIRKQTGKFGMSFLETCCGKTEERQHNWRRALTDAANILGDHPQNWDNEAYKITTISKDVLEKLNATPSRDFNDLVGMEAHIAKMESLLCLESQGVRIVGIWGPAGVGKTTIARALYNQYHENFNLSIFMENVRESYGEAGLDDYGLKLHLQQRFLSKLL--DQKDLRVRHL-GAIEERLKSQKVLIILDDVDNIEQLKALAKENQWFGNKSRIVVTTQNKQLLVSHDINHMYQVAYPSKQEALTIFCQHAFKQSSPSDDLKHLAIEFTTLAGHLPLALRVLGSFMRGKGKEEWEFSLPTLKSRLDGEVEKVLKVGYDGLHDHEKDLFL 435          
BLAST of Vigun01g026500.1 vs. DB:Swiss
Match: SNC1_ARATH (Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=SNC1 PE=1 SV=5)

HSP 1 Score: 237.269 bits (604), Expect = 3.240e-67
Identity = 147/426 (34.51%), Postives = 242/426 (56.81%), Query Frame = 1
Query:  130 KYDVFVSFRVEDIRHTLLSHLIGAFQRKKICAFIDAELQRGHEIGPSLFQAIERSDILLIIFSPHYASSHWCLEELEKILECRDKYERTVIPVFYNVQPTDVRHQLRTYENAFVEH-ELNYQNKVQIWKDALKHSADLSGIDSSKFPCDFELVEEIATVVLKGLAKPLVVAKELVGIDEKIATIESWIKKDSK-GTCLIGIWGMGGIGKTTLAEEVFNKLHSEYEACYFLAHEREESNKHGIISLK--EKIFSELLGC-EVKIYTQNSLPGHIARRISRMKVLIVLDDVNNSDHIKNLLGDFGNFGSGSTIIVTTRNEQVLKTNKVDETYQLTKLSFNEALELFHLLVGKQNDNQREYNELCERVVHYAQGIPLVLKVLAGHLRGNKKEVWESELDKLKGMPHKEVYDVMTWSFYDLDRKQQQIFL 1392
            +YDVF SFR ED+R + LSHL+   + K I  FID E++R   IGP L  AI+ S I ++IFS +YASS WCL EL +I +C     + VIP+F++V  ++V+ Q   +   F E  +   +++ Q WK AL   A ++G D  K+P +  ++EE+A  VL+    P     +LVGI+  I  I+S +  +SK    ++GIWG  GIGK+T+   +++KL  ++    F+ ++    +    + L+  +++ SE+LG  ++KI       G + +R+ + KVLI+LDDV++ + +K L+G    FGSGS IIV T++ Q+LK +++D  Y++   S + AL +       ++    ++ EL   V   A  +PL L VL   L+G  KE W   + +L+   + ++   +  S+  L +K Q +FL
Sbjct:   20 RYDVFPSFRGEDVRDSFLSHLLKELRGKAI-TFIDDEIERSRSIGPELLSAIKESRIAIVIFSKNYASSTWCLNELVEIHKCYTNLNQMVIPIFFHVDASEVKKQTGEFGKVFEETCKAKSEDEKQSWKQALAAVAVMAGYDLRKWPSEAAMIEELAEDVLRKTMTPSDDFGDLVGIENHIEAIKSVLCLESKEARIMVGIWGQSGIGKSTIGRALYSKLSIQFHHRAFITYKSTSGSDVSGMKLRWEKELLSEILGQKDIKIEHF----GVVEQRLKQQKVLILLDDVDSLEFLKTLVGKAEWFGSGSRIIVITQDRQLLKAHEIDLIYEVEFPSEHLALTMLCRSAFGKDSPPDDFKELAFEVAKLAGNLPLGLSVLGSSLKGRTKEWWMEMMPRLRNGLNGDIMKTLRVSYDRLHQKDQDMFL 440          
BLAST of Vigun01g026500.1 vs. DB:Swiss
Match: RPP5_ARATH (Disease resistance protein RPP5 OS=Arabidopsis thaliana OX=3702 GN=RPP5 PE=1 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 4.849e-63
Identity = 148/438 (33.79%), Postives = 237/438 (54.11%), Query Frame = 1
Query:  103 SSENNTPQIKYDVFVSFRVEDIRHTLLSHLIGAFQRKKICAFIDAELQRGHEIGPSLFQAIERSDILLIIFSPHYASSHWCLEELEKILECRDKYERTVIPVFYNVQPTDVRHQLRTYENAF-----VEHELNYQNKVQIWKDALKHSADLSGIDSSKFPCDFELVEEIATVVLKGLAKPLVVAKELVGIDEKIATIESWIKKDSKGTCLIGIWGMGGIGKTTLAEEVFNKLHSEYEACYFLAHEREE-SNKHGI-ISLKEKIFSELLGC-EVKIYTQNSLPGHIARRISRMKVLIVLDDVNNSDHIKNLLGDFGNFGSGSTIIVTTRNEQVLKTNKVDETYQLTKLSFNEALELFHLLVGKQNDNQREYNELCERVVHYAQGIPLVLKVLAGHLRGNKKEVWESELDKLKGMPHKEVYDVMTWSFYDLDRKQQQIFL 1392
            ++ +++ + +YDVF SF   D+R T LSHLI A   K I  FID  ++R   I P L  AI  + I ++IFS +YASS WCL EL +I +C +   + VIPVFY+V P++VR Q   +   F     V  +    ++ Q W  AL   A+++G D    P +  +VE+I+  V   L        + VGI+  I  I+S +  +SK   ++GIWG  GIGK+T+   +F++L  ++    FL ++    S+  G+ +S ++++ SE+LG  ++KI       G + +R+   KVLI+LDDV+N + +K L+G    FGSGS IIV T++ Q LK + +D  Y++   S   AL +       ++    ++ EL   V   A  +PL L VL   LR   K+ W   + +L+   + ++   +  S+  L +K Q +FL
Sbjct:    2 AASSSSGRRRYDVFPSFSGVDVRKTFLSHLIEALDGKSINTFIDHGIERSRTIAPELISAIREARISIVIFSKNYASSTWCLNELVEIHKCFNDLGQMVIPVFYDVDPSEVRKQTGEFGKVFEKTCEVSKDKQPGDQKQRWVQALTDIANIAGEDLLNGPNEAHMVEKISNDVSNKLITRSKCFDDFVGIEAHIEAIKSVLCLESKEARMVGIWGQSGIGKSTIGRALFSQLSIQFPLRAFLTYKSTSGSDVSGMKLSWEKELLSEILGQKDIKIEHF----GVVEQRLKHKKVLILLDDVDNLEFLKTLVGKAEWFGSGSRIIVITQDRQFLKAHDIDLVYEVKLPSQGLALTMLCRSAFGKDSPPDDFKELAFEVAKLAGHLPLGLNVLGSSLRRRGKKEWMEMMPRLRNGLNGDIMKTLRVSYDRLHQKDQDMFL 435          
BLAST of Vigun01g026500.1 vs. DB:Swiss
Match: RLM3_ARATH (Disease resistance protein RLM3 OS=Arabidopsis thaliana OX=3702 GN=RLM3 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 9.212e-63
Identity = 146/418 (34.93%), Postives = 224/418 (53.59%), Query Frame = 1
Query:  133 YDVFVSFRVEDIRHTLLSHLIGAFQRKKICAFIDAELQRGHEIGPSLFQAIERSDILLIIFSPHYASSHWCLEELEKILECRDKYERTVIPVFYNVQPTDVRHQLRTYENAFVEH-ELNYQNKVQIWKDALKHSADLSGIDSSKFPCDFELVEEIATVVLKGLAKPLVVAKELVGIDEKIATIESWIKKDSKGTCLIGIWGMGGIGKTTLAEEVFNKLHSEYEACYFLAHERE-ESNKHGIISLKEKIFSELLGCEVKIYTQNSLPGHIARRISRMKVLIVLDDVNNSDHIKNLLGDFGNFGSGSTIIVTTRNEQVLKTNKVDETYQLTKLSFNEALELFHLLVGKQNDNQREYNELCERVVHYAQGIPLVLKVLAGHLRGNKKEVWESELDKLKGMPHKEVYDVMTWSFYDLDRKQQ 1380
            YDVF +FR ED+RH+L+SHL     RK I  F D  ++R  +I P L  AIE S I L++FS +YASS WCL+EL KI EC +K ++ VIP+FY V P+ VR Q   +   F E  +   +N+ + W  AL   A L+G D   +  + E++E IA  V   L  P     + VGI+  I  + S ++ DSK   +IGI G    GKTT+   ++++L S++    F+A++R+  S+    +  +E+  SE+L C+  I  +    G + +R+   KVLIVLDDV++ + +K L+G    FGS S I+V T+  ++LK + +   Y++   S   A ++F      +N     +NEL +     A   P  LK +    R   KE W   L + +   +K     +  S+ +LD K Q
Sbjct:    9 YDVFPNFRGEDVRHSLVSHLRKELDRKFINTFNDNRIERSRKITPELLLAIENSRISLVVFSKNYASSTWCLDELVKIQECYEKLDQMVIPIFYKVDPSHVRKQTGEFGMVFGETCKGRTENEKRKWMRALAEVAHLAGEDLRNWRSEAEMLENIAKDVSNKLFPPSNNFSDFVGIEAHIEALISMLRFDSKKARMIGICGPSETGKTTIGRALYSRLKSDFHHRAFVAYKRKIRSDYDQKLYWEEQFLSEIL-CQKDIKIEEC--GAVEQRLKHTKVLIVLDDVDDIELLKTLVGRIRWFGSESKIVVITQKRELLKAHNIAHVYEVGFPSEELAHQMFCRYAFGKNSPPHGFNELADEAAKIAGNRPKALKYVGSSFRRLDKEQWVKMLSEFRSNGNK-----LKISYDELDGKGQ 418          
BLAST of Vigun01g026500.1 vs. DB:Swiss
Match: TAO1_ARATH (Disease resistance protein TAO1 OS=Arabidopsis thaliana OX=3702 GN=TAO1 PE=4 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 2.364e-62
Identity = 142/427 (33.26%), Postives = 235/427 (55.04%), Query Frame = 1
Query:  133 YDVFVSFRVEDIRHTLLSHLIGAFQRKKICAFIDAELQRGHEIGPSLFQAIERSDILLIIFSPHYASSHWCLEELEKILECRDKYERTVIPVFYNVQPTDVRHQLRTYENAFVEHELNY-QNKVQIWKDALKHSADLSGIDSSKFPCDFELVEEIATVVLKGLA-KPLVVAKELVGIDEKIATIESWIKKDSKGTCLIGIWGMGGIGKTTLAEEVFNKLHSEYEACYFLAH--EREESNKHGIISLKEKIFSELLGCEVKIYTQNSLPGHIA---RRISRMKVLIVLDDVNNSDHIKNLLGDFGNFGSGSTIIVTTRNEQVLKTNKVDETYQLTKLSFNEALELFHLLVGKQNDNQREYNELCERVVHYAQGIPLVLKVLAGHLRGNKKEVWESELDKLKGMPHKEVYDVMTWSFYDLDRKQQQIFL 1392
            + VF+SFR ED+R  LLSH+   FQR  I  FID E++RG  IGP L QAI  S I +I+ S +Y SS WCL+EL +I++CR++  +TV+ VFY+V P+DVR Q   +   F +  +   +  VQ WK AL  +A++ G DS  +  + +++ +I+  V   L+  P     E VGI+     I S ++ D +   +IGIWG  GIGKTT++  ++NKL  +++    + +   R     H   S K ++  ELL     I  ++ +  H+     R+   KVL+VLDDV+    +  +  D   FG GS IIV T++ ++LK + +   Y++   + +EALE+F +    +   +  + ++   V   A  +PL L+V+  +LR   K+ W   + +L+     ++  V+ +S+  L  +++ +FL
Sbjct:   40 HPVFLSFRGEDVRKGLLSHIQKEFQRNGITPFIDNEMKRGGSIGPELLQAIRGSKIAIILLSRNYGSSKWCLDELVEIMKCREELGQTVMTVFYDVDPSDVRKQKGDFGKVFKKTCVGRPEEMVQRWKQALTSAANILGEDSRNWENEADMIIKISKDVSDVLSFTPSKDFDEFVGIEAHTTEITSLLQLDLEEVRMIGIWGPAGIGKTTISRVLYNKLFHQFQLGAIIDNIKVRYPRPCHDEYSAKLQLQKELLS--QMINQKDMVVPHLGVAQERLKDKKVLLVLDDVDGLVQLDAMAKDVQWFGLGSRIIVVTQDLKLLKAHGIKYIYKVDFPTSDEALEIFCMYAFGEKSPKVGFEQIARTVTTLAGKLPLGLRVMGSYLRRMSKQEWAKSIPRLRTSLDDDIESVLKFSYNSLAEQEKDLFL 464          
BLAST of Vigun01g026500.1 vs. DB:Swiss
Match: RPP4_ARATH (Disease resistance protein RPP4 OS=Arabidopsis thaliana OX=3702 GN=RPP4 PE=1 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 3.995e-62
Identity = 144/425 (33.88%), Postives = 239/425 (56.24%), Query Frame = 1
Query:  130 KYDVFVSFRVEDIRHTLLSHLIGAFQRKKICAFIDAELQRGHEIGPSLFQAIERSDILLIIFSPHYASSHWCLEELEKILECRDKYERTVIPVFYNVQPTDVRHQLRTYENAFVEH-ELNYQNKVQIWKDALKHSADLSGIDSSKFPCDFELVEEIATVVLKGLAKPLVVAKELVGIDEKIATIESWIKKDSK-GTCLIGIWGMGGIGKTTLAEEVFNKLHSEYEACYFLAHEREE-SNKHGI-ISLKEKIFSELLGC-EVKIYTQNSLPGHIARRISRMKVLIVLDDVNNSDHIKNLLGDFGNFGSGSTIIVTTRNEQVLKTNKVDETYQLTKLSFNEALELFHLLVGKQNDNQREYNELCERVVHYAQGIPLVLKVLAGHLRGNKKEVWESELDKLKGMPHKEVYDVMTWSFYDLDRKQQQIF 1389
            +YDVF SF   D+R T LSHLI A  R+ I  F+D  + R   I  +L  AI  + I ++IFS +YASS WCL EL +I +C  K E+ VIPVFY V P+ VR Q+  + + F +  E   +++ Q W  AL   ++L+G D    P +  +V++IA  V   L        + VGI++ I  I+S +  +SK    ++GIWG  GIGK+T+   +F++L S++    F+ ++    S+  G+ +S ++++ SE+LG  ++KI       G + +R+   KVLI+LDDV+N + +K L+G    FGSGS IIV T+++Q+LK +++D  Y++   S   AL++       ++    ++ EL   V      +PL L VL   L+G  K+ W   + +L+     ++ + +   +  L++K +++F
Sbjct:   12 RYDVFPSFSGVDVRKTFLSHLIEALDRRSINTFMDHGIVRSCIIADALITAIREARISIVIFSENYASSTWCLNELVEIHKCYKKGEQMVIPVFYGVDPSHVRKQIGGFGDVFKKTCEDKPEDQKQRWVKALTDISNLAGEDLRNGPTEAFMVKKIANDVSNKLFPLPKGFGDFVGIEDHIKAIKSILCLESKEARIMVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFITYKSTSGSDVSGMKLSWEKELLSEILGQKDIKI----DHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGKAEWFGSGSRIIVITQDKQLLKAHEIDLVYEVELPSQGLALKMISQYAFGKDSPPDDFKELAFEVAELVGSLPLGLSVLGSSLKGRDKDEWVKMMPRLRNDSDDKIEETLRVGYDRLNKKNRELF 432          
BLAST of Vigun01g026500.1 vs. DB:Swiss
Match: RLM1B_ARATH (Disease resistance protein RML1B OS=Arabidopsis thaliana OX=3702 GN=RLM1B PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 6.368e-62
Identity = 143/432 (33.10%), Postives = 232/432 (53.70%), Query Frame = 1
Query:  130 KYDVFVSFRVEDIRHTLLSHLIGAFQRKKICAFIDAELQRGHEIGPSLFQAIERSDILLIIFSPHYASSHWCLEELEKILECRDKYERTVIPVFYNVQPTDVRHQLRTYENAFVEH-ELNYQNKVQIWKDALKHSADLSGIDSSKFPCDFELVEEIATVVLKGL-AKPLVVAKELVGIDEKIATIESWIKKDSKGTCLIGIWGMGGIGKTTLAEEVFNKLHSEYEACYFLAHEREES----NKHGI-ISLKEKIFSELLGCEVKIYTQNSLP----GHIARRISRMKVLIVLDDVNNSDHIKNLLGDFGNFGSGSTIIVTTRNEQVLKTNKVDETYQLTKLSFNEALELFHLLVGKQNDNQREYNELCERVVHYAQGIPLVLKVLAGHLRGNKKEVWESELDKLKGMPHKEVYDVMTWSFYDLDRKQQQIFL 1392
            K++VF SF   D+R TLLSH+   F R  I  F D ++ R   IGPSL +AI+ S I ++I S  YASS WCL+EL +ILEC+    + V+ +FY V P+DVR Q+  +  AF E      + + Q W  AL   ++++G D  ++  +  ++E+IA  VL  L A P      +VGI+  +  I+S +  D+    ++ I G  GIGKTT+A  ++  L   ++   F+ + R       +++G  + L+E+  S       K+  Q+ +     G I   +S  +VLI+LDDVN    ++ L  +   FG GS I+VTT N+++L+ + ++ TY +   S  +AL++      KQ   +  + EL E V      +PL L V+   LRG K++ WE  + +L+ +  +++ DV+   +  LD   Q +FL
Sbjct:   13 KFNVFASFHGPDVRKTLLSHIRLQFNRNGITMFDDQKIVRSATIGPSLVEAIKESRISIVILSKKYASSSWCLDELVEILECKKAMGQIVMTIFYGVDPSDVRKQIGKFGIAFNETCARKTEEERQKWSKALNQVSNIAGEDFLRWDNEAIMIEKIARDVLDKLNATPSRDFDGMVGIEAHLREIKSLLDLDNVEVKIVAIAGPAGIGKTTIARALYGLLSKRFQLSCFVDNLRGSYHSGFDEYGFKLHLQEQFLS-------KVLNQSGMRICHLGAIKENLSDQRVLIILDDVNKLKQLEALANETTWFGPGSRIVVTTENKELLQQHGINNTYHVGFPSDEDALKILCSYAFKQTSPRHGFEELSESVTKLCGKLPLGLCVVGSSLRGKKEDEWEDVVTRLETILDQDIEDVLRVGYESLDENAQTLFL 437          
BLAST of Vigun01g026500.1 vs. DB:Swiss
Match: DSC2_ARATH (Disease resistance-like protein DSC2 OS=Arabidopsis thaliana OX=3702 GN=DSC2 PE=1 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 1.463e-60
Identity = 141/441 (31.97%), Postives = 236/441 (53.51%), Query Frame = 1
Query:  133 YDVFVSFRVEDIRHTLLSHLIGAFQRKKICAFIDAELQRGHEIGPSLFQAIERSDILLIIFSPHYASSHWCLEELEKILECRDKYERTVIPVFYNVQPTDVRHQLRTYENAFVEHELNYQNKV-QIWKDALKHSADLSGIDSSKFPCDFELVEEIATVVLKGLA-KPLVVAKELVGIDEKIATIESWIKKDSKGTCLIGIWGMGGIGKTTLAEEVFNKLHSEYEACYFLAHER--------EESN-----------KHGIISLKEKIFSELLGCEVKIYTQNSLPGHIARRISRMKVLIVLDDVNNSDHIKNLLGDFGNFGSGSTIIVTTRNEQVLKTNKVDETYQLTKLSFNEALELFHLLVGKQNDNQREYNELCERVVHYAQGIPLVLKVLAGHLRGNKKEVWESELDKLKGMPHKEVYDVMTWSFYDLDRKQQQIFL 1392
            + VF SFR ED+R   LSH+   F+ K I  FID E++RG  IGP LFQAI  S I +++ S +YASS WCL EL +I+ CR++  +TV+ VFY V P+DVR Q   +  AF +  +    +V Q W  AL   A++ G DS K+  + +++ ++A  V   L+  P     + VGI   I  I S +  +S    +IGI G  GIGKTT+A  +++++  +++   F+ + R        +E N           +   ++L+ ++ SEL     +   Q    G +  R+   KVL++LD V+  + +  L  +   FG GS II+TT+++++L+ ++++  Y++   + +EAL++F L    Q      + +L       A  +PL L+VL  +LRG   E W++ L +L+     E+   + +++  L  K + +FL
Sbjct:   61 HQVFPSFRGEDVRKGFLSHIQKEFKSKGIVPFIDDEMKRGESIGPGLFQAIRESKIAIVLLSKNYASSSWCLNELVEIMNCREEIGQTVMTVFYQVDPSDVRKQTGDFGKAFKKTCVGKTQEVKQRWSRALMDVANILGQDSRKWDKEADMIVKVAKDVSDVLSYTPSRDFDDYVGIRPHITRINSLLCLESSDVRMIGILGPPGIGKTTIARVLYDQISEKFQFSAFIENIRLSYWKGWHDEGNLDFPVEIMTGDRQRKLNLQRRLLSELFN---QKDIQVRHLGAVQERLRDHKVLVILDGVDQLEQLTALAKETQWFGYGSRIIITTQDQRLLRAHEINHVYKVDLPATDEALQIFCLYAFGQKFPYDGFKKLAREFTALAGELPLGLRVLGSYLRGMSLEEWKNALPRLRTSLDGEIEKTLRFAYNVLSDKDKSLFL 498          
The following BLAST results are available for this feature:
BLAST of Vigun01g026500.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
TMVRN_NICGU4.736e-7937.88TMV resistance protein N OS=Nicotiana glutinosa OX... [more]
DSC1_ARATH1.356e-7236.57Disease resistance-like protein DSC1 OS=Arabidopsi... [more]
Y4117_ARATH3.307e-6935.16Putative disease resistance protein At4g11170 OS=A... [more]
SNC1_ARATH3.240e-6734.51Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Ar... [more]
RPP5_ARATH4.849e-6333.79Disease resistance protein RPP5 OS=Arabidopsis tha... [more]
RLM3_ARATH9.212e-6334.93Disease resistance protein RLM3 OS=Arabidopsis tha... [more]
TAO1_ARATH2.364e-6233.26Disease resistance protein TAO1 OS=Arabidopsis tha... [more]
RPP4_ARATH3.995e-6233.88Disease resistance protein RPP4 OS=Arabidopsis tha... [more]
RLM1B_ARATH6.368e-6233.10Disease resistance protein RML1B OS=Arabidopsis th... [more]
DSC2_ARATH1.463e-6031.97Disease resistance-like protein DSC2 OS=Arabidopsi... [more]
back to top
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00364DISEASERSISTcoord: 314..328
score: 44.67
coord: 239..254
score: 65.0
coord: 407..421
score: 40.83
NoneNo IPR availableGENE3D3.40.50.300coord: 210..368
e-value: 3.3E-30
score: 106.9
IPR000157Toll/interleukin-1 receptor homology (TIR) domainSMARTSM00255till_3coord: 44..180
e-value: 3.6E-44
score: 162.7
IPR000157Toll/interleukin-1 receptor homology (TIR) domainPFAMPF01582TIRcoord: 44..202
e-value: 3.0E-38
score: 131.4
IPR000157Toll/interleukin-1 receptor homology (TIR) domainPROSITEPS50104TIRcoord: 43..180
score: 24.54
IPR002182NB-ARCPFAMPF00931NB-ARCcoord: 226..437
e-value: 1.9E-30
score: 105.9
IPR035897Toll/interleukin-1 receptor homology (TIR) domain superfamilyGENE3D3.40.50.10140coord: 39..209
e-value: 1.2E-59
score: 202.9
IPR035897Toll/interleukin-1 receptor homology (TIR) domain superfamilySUPERFAMILY52200Toll/Interleukin receptor TIR domaincoord: 36..182
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 209..464

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun01g026500.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g026500.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g026500.1; organism=Vigna unguiculata; type=mRNA; length=1662bp
GTGATTCTTGTTTTTGTTCTTATGCCAGGGTCAAACCCCGTGTTTGTTTG
GACTGTTATTGATTGCTCTACTCTCATTTTCCCAAGGCTGGTGTTTGTGG
GAAAACTGAAGAGTTGGTACACAATACCTAAGGCTTAATTTCTGAATTTG
CTAATCAAGAAGAAGCTGCAGGGTGTAGAGGTAAAACCATGTCACACGAC
AAGGCTACCAAAAGACTGAGGCGTGGCAGGGAGAAACCAGTGTTAGACAA
CCATGCGCCTAAGAAACTGAAGTACTGGGTGGAGGAAAAATCCTCAGAGA
ACAACACTCCTCAAATAAAGTATGATGTTTTTGTTAGCTTCAGGGTTGAA
GACATCCGCCACACGCTTCTTAGCCATTTGATTGGTGCTTTTCAAAGAAA
GAAAATATGTGCCTTTATAGATGCTGAACTTCAGAGGGGACATGAAATAG
GACCATCACTTTTTCAAGCAATTGAACGATCAGACATCCTGTTGATCATA
TTCTCACCACATTATGCTTCTTCTCATTGGTGCTTAGAGGAACTAGAGAA
AATCCTTGAGTGTAGAGACAAGTATGAACGGACTGTGATCCCTGTTTTCT
ACAATGTGCAACCCACAGATGTACGACATCAATTGCGGACTTATGAAAAT
GCATTTGTTGAGCATGAACTAAATTATCAGAACAAGGTACAAATCTGGAA
AGATGCCTTGAAGCATTCTGCTGATTTATCTGGAATTGATTCGTCAAAAT
TTCCATGTGATTTTGAACTGGTTGAAGAAATTGCCACTGTTGTGCTGAAG
GGGTTGGCTAAACCCCTGGTTGTTGCAAAAGAACTTGTTGGAATTGATGA
AAAAATTGCAACAATAGAATCATGGATAAAAAAGGATTCAAAAGGCACTT
GTCTGATTGGAATTTGGGGTATGGGCGGTATAGGCAAAACAACCCTTGCA
GAAGAGGTCTTCAACAAACTACATTCTGAATATGAAGCTTGTTATTTTTT
GGCTCATGAAAGGGAAGAATCAAACAAACATGGAATAATTTCTTTGAAGG
AAAAAATATTCTCCGAACTATTAGGATGTGAAGTGAAAATTTATACACAA
AATTCATTGCCAGGACATATTGCTAGGAGAATCAGTCGAATGAAGGTTCT
CATTGTTCTTGATGATGTTAATAATTCTGATCACATAAAAAATCTATTGG
GAGATTTTGGAAATTTTGGATCGGGCAGTACAATAATTGTAACAACTAGA
AATGAGCAAGTGCTCAAGACAAACAAGGTTGATGAGACATACCAGCTTAC
GAAACTCAGTTTCAACGAAGCTCTTGAACTTTTTCATTTACTTGTCGGAA
AACAAAACGATAATCAAAGGGAGTACAATGAGCTATGTGAAAGGGTGGTC
CATTATGCCCAAGGTATTCCATTAGTTCTTAAAGTTTTGGCTGGTCATCT
TCGTGGAAACAAAAAGGAAGTGTGGGAAAGTGAGCTAGACAAGCTTAAAG
GGATGCCTCACAAAGAAGTTTATGATGTAATGACATGGAGTTTCTATGAT
CTAGATCGTAAACAACAGCAGATTTTTCTTACAGAGTGAGATAAATGTGG
GTGAGCTAAAGTTTTTATTGAAAGATAGCGAAAGGGATAATTCTGTTGTG
GCTGATTTACAA
back to top

protein sequence of Vigun01g026500.1_Vu_IT97K-499-35_v1.1

>Vigun01g026500.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g026500.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g026500.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=467bp
MSHDKATKRLRRGREKPVLDNHAPKKLKYWVEEKSSENNTPQIKYDVFVS
FRVEDIRHTLLSHLIGAFQRKKICAFIDAELQRGHEIGPSLFQAIERSDI
LLIIFSPHYASSHWCLEELEKILECRDKYERTVIPVFYNVQPTDVRHQLR
TYENAFVEHELNYQNKVQIWKDALKHSADLSGIDSSKFPCDFELVEEIAT
VVLKGLAKPLVVAKELVGIDEKIATIESWIKKDSKGTCLIGIWGMGGIGK
TTLAEEVFNKLHSEYEACYFLAHEREESNKHGIISLKEKIFSELLGCEVK
IYTQNSLPGHIARRISRMKVLIVLDDVNNSDHIKNLLGDFGNFGSGSTII
VTTRNEQVLKTNKVDETYQLTKLSFNEALELFHLLVGKQNDNQREYNELC
ERVVHYAQGIPLVLKVLAGHLRGNKKEVWESELDKLKGMPHKEVYDVMTW
SFYDLDRKQQQIFLTE*
back to top

mRNA from alignment at Vu01:3118705..3121147-

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun01g026500.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g026500.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g026500.1; organism=Vigna unguiculata; type=mRNA; length=2443bp; location=Sequence derived from: Vu01:3118705..3121147- (Vigna unguiculata
GTGATTCTTGTTTTTGTTCTTATGCCAGGGTCAAACCCCGTGTTTGTTTG GACTGTTATTGATTGCTCTACTCTCATTTTCCCAAGGCTGGTGTTTGTGG GAAAACTGAAGAGTTGGTACACAATACCTAAGGCTTAATTTCTGAATTTG CTAATCAAGAAGAAGCTGCAGGTATTGTATGTTTCATGTGAAACTCTCTT CCTACTCATTTCTAGCTTCTCATATATATAGTTTATTTAAGTTTCATAAA TTCCATTTTTTTCTACTTCGTTTTTAACTCTGTTTTCTTTCCAGTTACCT ATTCTGATGTAATCCTCTGATTTATTTTGAAACGGAACATACTGTGTTGA TTTCTATAATTACGCAACCTTTATGTTTTTTTGCTTCGAAATTGTAGTTT CTATATAGCATATTTAATCTTTTTTATGGATACTATTCACTATTTTTGAG TTCCTGGAGTCAAAATTCACATGGACTGAACAAAAATGTATATATAAAAT CCCAAATGAATATTTTTCTAGTATAAGAAGTGGAAGTACAGTCTGTATAA CTCTGGTGTCAAATGAGTAATTAAAGATGCTCTAACTTTTTGGCTCTAGG TGATAACATTGTGCTATGTTTTTCACTGTCTCTGTTATTTCACTGAAGGG TGTAGAGGTAAAACCATGTCACACGACAAGGCTACCAAAAGACTGAGGCG TGGCAGGGAGAAACCAGTGTTAGACAACCATGCGCCTAAGAAACTGAAGT ACTGGGTGGAGGAAAAATCCTCAGAGAACAACACTCCTCAAATAAAGTAT GATGTTTTTGTTAGCTTCAGGGTTGAAGACATCCGCCACACGCTTCTTAG CCATTTGATTGGTGCTTTTCAAAGAAAGAAAATATGTGCCTTTATAGATG CTGAACTTCAGAGGGGACATGAAATAGGACCATCACTTTTTCAAGCAATT GAACGATCAGACATCCTGTTGATCATATTCTCACCACATTATGCTTCTTC TCATTGGTGCTTAGAGGAACTAGAGAAAATCCTTGAGTGTAGAGACAAGT ATGAACGGACTGTGATCCCTGTTTTCTACAATGTGCAACCCACAGATGTA CGACATCAATTGCGGACTTATGAAAATGCATTTGTTGAGCATGAACTAAA TTATCAGAACAAGGTACAAATCTGGAAAGATGCCTTGAAGCATTCTGCTG ATTTATCTGGAATTGATTCGTCAAAATTTCCGTAAGCTCTTTTTTTTTTT TTCTGTTAATGTTTCATATTTTCTAGCTGTTATATAATTATCATGTACAT AATACATGCTTGTTGAGGTTGCAAAGCGATGTAACCTTTGTATATATTAA ATTGTTTTCAGCAGAATGTATACTTAACATTTTCCATGGTAACGTAATTT TAGCCAATACCGCTGTGATTGTATTCAGATGGAACCAATTATGCTTTGTT AGTCCATTGCATTATGACTGAGTTGTACATTTGAATATATTGTGACAACA TTGATTTTAAAACACTTTCTCTCTGTGTCATATAGATGTGATTTTGAACT GGTTGAAGAAATTGCCACTGTTGTGCTGAAGGGGTTGGCTAAACCCCTGG TTGTTGCAAAAGAACTTGTTGGAATTGATGAAAAAATTGCAACAATAGAA TCATGGATAAAAAAGGATTCAAAAGGCACTTGTCTGATTGGAATTTGGGG TATGGGCGGTATAGGCAAAACAACCCTTGCAGAAGAGGTCTTCAACAAAC TACATTCTGAATATGAAGCTTGTTATTTTTTGGCTCATGAAAGGGAAGAA TCAAACAAACATGGAATAATTTCTTTGAAGGAAAAAATATTCTCCGAACT ATTAGGATGTGAAGTGAAAATTTATACACAAAATTCATTGCCAGGACATA TTGCTAGGAGAATCAGTCGAATGAAGGTTCTCATTGTTCTTGATGATGTT AATAATTCTGATCACATAAAAAATCTATTGGGAGATTTTGGAAATTTTGG ATCGGGCAGTACAATAATTGTAACAACTAGAAATGAGCAAGTGCTCAAGA CAAACAAGGTTGATGAGACATACCAGCTTACGAAACTCAGTTTCAACGAA GCTCTTGAACTTTTTCATTTACTTGTCGGAAAACAAAACGATAATCAAAG GGAGTACAATGAGCTATGTGAAAGGGTGGTCCATTATGCCCAAGGTATTC CATTAGTTCTTAAAGTTTTGGCTGGTCATCTTCGTGGAAACAAAAAGGAA GTGTGGGAAAGTGAGCTAGACAAGCTTAAAGGGATGCCTCACAAAGAAGT TTATGATGTAATGACATGGAGTTTCTATGATCTAGATCGTAAACAACAGC AGATTTTTCTTACAGAGTGAGATAAATGTGGGTGAGCTAAAGTTTTTATT GAAAGATAGCGAAAGGGATAATTCTGTTGTGGCTGATTTACAA
back to top

Coding sequence (CDS) from alignment at Vu01:3118705..3121147-

>Vigun01g026500.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g026500.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g026500.1; organism=Vigna unguiculata; type=CDS; length=1401bp; location=Sequence derived from: Vu01:3118705..3121147- (Vigna unguiculata
ATGTCACACGACAAGGCTACCAAAAGACTGAGGCGTGGCAGGGAGAAACC
AGTGTTAGACAACCATGCGCCTAAGAAACTGAAGTACTGGGTGGAGGAAA
AATCCTCAGAGAACAACACTCCTCAAATAAAGTATGATGTTTTTGTTAGC
TTCAGGGTTGAAGACATCCGCCACACGCTTCTTAGCCATTTGATTGGTGC
TTTTCAAAGAAAGAAAATATGTGCCTTTATAGATGCTGAACTTCAGAGGG
GACATGAAATAGGACCATCACTTTTTCAAGCAATTGAACGATCAGACATC
CTGTTGATCATATTCTCACCACATTATGCTTCTTCTCATTGGTGCTTAGA
GGAACTAGAGAAAATCCTTGAGTGTAGAGACAAGTATGAACGGACTGTGA
TCCCTGTTTTCTACAATGTGCAACCCACAGATGTACGACATCAATTGCGG
ACTTATGAAAATGCATTTGTTGAGCATGAACTAAATTATCAGAACAAGGT
ACAAATCTGGAAAGATGCCTTGAAGCATTCTGCTGATTTATCTGGAATTG
ATTCGTCAAAATTTCCATGTGATTTTGAACTGGTTGAAGAAATTGCCACT
GTTGTGCTGAAGGGGTTGGCTAAACCCCTGGTTGTTGCAAAAGAACTTGT
TGGAATTGATGAAAAAATTGCAACAATAGAATCATGGATAAAAAAGGATT
CAAAAGGCACTTGTCTGATTGGAATTTGGGGTATGGGCGGTATAGGCAAA
ACAACCCTTGCAGAAGAGGTCTTCAACAAACTACATTCTGAATATGAAGC
TTGTTATTTTTTGGCTCATGAAAGGGAAGAATCAAACAAACATGGAATAA
TTTCTTTGAAGGAAAAAATATTCTCCGAACTATTAGGATGTGAAGTGAAA
ATTTATACACAAAATTCATTGCCAGGACATATTGCTAGGAGAATCAGTCG
AATGAAGGTTCTCATTGTTCTTGATGATGTTAATAATTCTGATCACATAA
AAAATCTATTGGGAGATTTTGGAAATTTTGGATCGGGCAGTACAATAATT
GTAACAACTAGAAATGAGCAAGTGCTCAAGACAAACAAGGTTGATGAGAC
ATACCAGCTTACGAAACTCAGTTTCAACGAAGCTCTTGAACTTTTTCATT
TACTTGTCGGAAAACAAAACGATAATCAAAGGGAGTACAATGAGCTATGT
GAAAGGGTGGTCCATTATGCCCAAGGTATTCCATTAGTTCTTAAAGTTTT
GGCTGGTCATCTTCGTGGAAACAAAAAGGAAGTGTGGGAAAGTGAGCTAG
ACAAGCTTAAAGGGATGCCTCACAAAGAAGTTTATGATGTAATGACATGG
AGTTTCTATGATCTAGATCGTAAACAACAGCAGATTTTTCTTACAGAGTG
A
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000157TIR_dom
IPR002182NB-ARC
IPR035897Toll_tir_struct_dom_sf
IPR027417P-loop_NTPase
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0043531ADP binding