Vigun01g146900.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun01g146900.1 vs. DB:Swiss
Match: PP427_ARATH (Pentatricopeptide repeat-containing protein At5g50390, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H58 PE=2 SV=1) HSP 1 Score: 736.102 bits (1899), Expect = 0.000e+0 Identity = 354/542 (65.31%), Postives = 438/542 (80.81%), Query Frame = 1 Query: 31 MMLWVLFMHVRCGLMLDARKLFDEMPERDSASWMTMIGGLVDTGNFSEAFRLFLCMWEEINDGGSRTFVTMIRASAGLGLVQVGRQIHSCALKRGVGDDNFVSCSLIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYCGMRDSGATIDHFTISIVIRICARLASLEHAKQAHAALVRHGYGTDIVANTALVDFYSKWGRMQDAQHVFNRMRCKNIISWNALIGGYGNHGQGEEAVEMFEQMLQEGMIPNHVTFLAVLSACSYSGLSERGWEIFHSMSRDHKVKPRAMHYACMIELLGREGLLDEAYALIRSAPFKPTTNMWAALLTACRMNENLELGKLAAEKLYGMEPEKLCXXXXXXXXXXSCGKLKEAAGVLQTLKRKGLRMLSACSWIEVKKQPYVFLCGDK--SHSQT--KEIYDKVDSLMVEISRYGYAVENETLLPDVDE-EEQRILKYHSEKLAIAFGLINTPYWTPLQITQGHRVCGDCHNAIKLIAKVTGREIVIKDASRFHHFRNGSCSCGDYW 1641
MM +L MHV+CG+++DAR+LFDE+PER+ S+ ++I G V+ GN+ EAF LF MWEE++D + TF M+RASAGLG + VG+Q+H CALK GV D+ FVSC LIDMYSKCG IEDA C F+ MPEKTTV WN++IA YALHGYSEEAL L MRDSG +ID FT+SI+IRI +LA LE KQAHA+L+R+G+ ++IVANTALVDFYSKWGR+ A++VF+++ KNIISWNAL+GGY NHG+G +AV++FE+M+ + PNHVTFLAVLSAC+YSGLSE+GWEIF SMS H +KPRAMHYACMIELLGR+GLLDEA A IR AP K T NMWAALL ACRM ENLELG++ AEKLYGM PEKL NYVV+ N+YNS GK EAAGVL+TL+ KGL M+ AC+W+EV Q + FL GD+ S+++T ++IY KVD LM EIS YGY+ E + LLPDVDE EE+R+ +YHSEKLAIA+GL+NTP W PLQITQ HR+C +CH ++ I+ VTGRE+V++DASRFHHF+ G CSCG YW
Sbjct: 160 MMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701 HSP 2 Score: 108.997 bits (271), Expect = 1.303e-23 Identity = 81/325 (24.92%), Postives = 148/325 (45.54%), Query Frame = 1 Query: 91 LFDEMPERDSASWMTMIGGLVDTGNFSEAFRLFLCMWEEIN---DGGSRTFVTMIRASAGLGLVQVGRQIHSCALKRGVGDDNFVSCSLIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYCGMRDSGATIDHFTISIVIRICARLASLEHAKQAHAALVRHGYGTDIVANTALVDFYSKWGRMQDAQHVFNRMRCKNIISWNALIGGYGNHGQGEEAVEMFEQMLQEGMIPNHVTFLAVLSACSYSGLSERGWEIFHSMSRDHKVKPRAMHYACMIELLGREGLLDEAYALIRSAPFKPTTNMWAALL 1056
L D + + + I LV F EAF LF + EI G T+ ++ A L ++ ++++ + G + ++ ++ M+ KCG I DA +FD++PE+ + SII+ + G EA L+ M + + + T ++++R A L S+ KQ H ++ G + + L+D YSK G ++DA+ F M K ++WN +I GY HG EEA+ + M G+ + T ++ + E + S+ R+ + + +++ + G +D A + P K + W AL+
Sbjct: 78 LDDTQISKSGVTICSQIEKLVLCNRFREAFELFEIL--EIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRN-GFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIIS-WNALM 398
BLAST of Vigun01g146900.1 vs. DB:Swiss
Match: PP252_ARATH (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1) HSP 1 Score: 414.075 bits (1063), Expect = 8.100e-137 Identity = 205/534 (38.39%), Postives = 328/534 (61.42%), Query Frame = 1 Query: 43 VLFMHVRCGLMLDARKLFDEMPERDSASWMTMIGGLVDTGNFSEAFRLFLCMWEEINDGGSRTFVTMIRASAGLGLVQVGRQIHSCALKRGVGDDNFVSCSLIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYCGMRDSGATIDHFTISIVIRICARLASLEHAKQAHAALVRHGYGTDIVANTALVDFYSKWGRMQDAQHVFNRMRCKNIISWNALIGGYGNHGQGEEAVEMFEQMLQEGMIPNHVTFLAVLSACSYSGLSERGWEIFHSMSRDHKVKPRAMHYACMIELLGREGLLDEAYALIRSAPFKPTTNMWAALLTACRMNENLELGKLAAEKLYGMEPEKLCXXXXXXXXXXSCGKLKEAAGVLQTLKRKGLRMLSACSWIEVKKQPYVFLCGDKSHSQTKEIYDKVDSLMVEISRYGYAVENETLLPDVDEEEQRI-LKYHSEKLAIAFGLINTPYWTPLQITQGHRVCGDCHNAIKLIAKVTGREIVIKDASRFHHFRNGSCSCGDYW 1641
+L M+ +CG + +ARK+F++MP+RD +W T+I G +A F M T ++I+A+A G Q+H +K G + V +L+D+Y++ G ++DA VFD + + V WN++IA +A +E+AL L+ GM G HF+ + + C+ LE K HA +++ G A L+D Y+K G + DA+ +F+R+ ++++SWN+L+ Y HG G+EAV FE+M + G+ PN ++FL+VL+ACS+SGL + GW + M +D + P A HY +++LLGR G L+ A I P +PT +W ALL ACRM++N ELG AAE ++ ++P+ +V+L N+Y S G+ +AA V + +K G++ ACSW+E++ ++F+ D+ H Q +EI K + ++ +I GY + ++ VD++E+ + L+YHSEK+A+AF L+NTP + + I + RVCGDCH AIKL +KV GREI+++D +RFHHF++G+CSC DYW
Sbjct: 101 LLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633 HSP 2 Score: 150.984 bits (380), Expect = 1.024e-37 Identity = 84/279 (30.11%), Postives = 155/279 (55.56%), Query Frame = 1 Query: 226 RTFVTMIRASAGLGLVQVGRQIHSCALKRGVGDDNFVSCSLIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYCGMRDSGATIDHFTISIVIRICARLASLEHAKQAHAALVRHGYGTDIVANTALVDFYSKWGRMQDAQHVFNRMRCKNIISWNALIGGYGNHGQGEEAVEMFEQMLQEGMIPNHVTFLAVLSACSYSGLSERGWEIFHSMSRDHKVKPRAMHYACMIELLGREGLLDEAYALIRSAPFKPTTNMWAALLTA 1062
R + T+++ L+ GR +H+ L+ D + +L++MY+KCGS+E+A VF++MP++ V W ++I+ Y+ H +AL + M G + + FT+S VI+ A Q H V+ G+ +++ +AL+D Y+++G M DAQ VF+ + +N +SWNALI G+ E+A+E+F+ ML++G P+H ++ ++ ACS +G E+G + M + + K A ++++ + G + +A + + + W +LLTA
Sbjct: 61 RFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE-KLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVS-WNSLLTA 337
BLAST of Vigun01g146900.1 vs. DB:Swiss
Match: PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1) HSP 1 Score: 412.149 bits (1058), Expect = 4.187e-135 Identity = 207/520 (39.81%), Postives = 328/520 (63.08%), Query Frame = 1 Query: 85 RKLFDEMPERDSASWMTMIGGLVDTGNFSEAFRLFLCMWEEINDGGSRTFVTMIRASAGLGLVQVGRQIHSCALKRGVGDDNFVSCSLIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYCGMRDSGATIDHFTISIVIRICARLASLEHAKQAHAALVRHGYGTDIVANTALVDFYSKWGRMQDAQHVFNRMRCKNIISWNALIGGYGNHGQGEEAVEMFEQMLQEGMIPNHVTFLAVLSACSYSGLSERGWEIFHSMSRDHKVKPRAMHYACMIELLGREGLLDEAYALIRSAPFKPTTNMWAALLTACRMNENLELGKLAAEKLYGMEPEKLCXXXXXXXXXXSCGKLKEAAGVLQTLKRKGLRMLSACSWIEVKKQPYVFLCGDKSHSQTKEIYDKVDSLMVEISRYGYAVENETLLPDVDEEEQRILKY-HSEKLAIAFGLINTPYWTPLQITQGHRVCGDCHNAIKLIAKVTGREIVIKDASRFHHFRNGSCSCGDYW 1641
R++F+ MP +D S+ T+I G +G + +A R+ M S T +++ + V G++IH +++G+ D ++ SL+DMY+K IED+ VF ++ + + WNS++A Y +G EAL L+ M + S VI CA LA+L KQ H ++R G+G++I +ALVD YSK G ++ A+ +F+RM + +SW A+I G+ HG G EAV +FE+M ++G+ PN V F+AVL+ACS+ GL + W F+SM++ + + HYA + +LLGR G L+EAY I +PT ++W+ LL++C +++NLEL + AEK++ ++ E + YV++ N+Y S G+ KE A + +++KGLR ACSWIE+K + + F+ GD+SH +I + + ++M ++ + GY + +L DVDEE +R L + HSE+LA+AFG+INT T +++T+ R+C DCH AIK I+K+T REI+++D SRFHHF G+CSCGDYW
Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715 HSP 2 Score: 131.339 bits (329), Expect = 6.274e-31 Identity = 79/294 (26.87%), Postives = 143/294 (48.64%), Query Frame = 1 Query: 94 FDEMPERDSASWMTMIGGLVDTGNFSEAFRLFLCMWEEINDGGSRTFVTMIRASAGLGLVQVGRQIHSCALKRGVGDDNFVSCSLIDMYSKC---GSIEDAHCVFDQMPEKTT---------------------------------VGWNSIIASYALHGYSEEALSLYCGMRDSGATIDHFTISIVIRICARLASLEHAKQAHAALVRHGYGTDIVANTALVDFYSKWGRMQDAQHVFNRMRCKNIISWNALIGGYGNHGQGEEAVEMFEQMLQEGMIPNHVTFLAVLSACSY 867
F + +W ++I D FS+A F+ M F +++++ + ++ G +H ++ G+ D + +L++MY+K GS VFD+MP++T+ V +N+IIA YA G E+AL + M + D FT+S V+ I + + K+ H ++R G +D+ ++LVD Y+K R++D++ VF+R+ C++ ISWN+L+ GY +G+ EA+ +F QM+ + P V F +V+ AC++
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAH 355 HSP 3 Score: 129.413 bits (324), Expect = 2.571e-30 Identity = 72/254 (28.35%), Postives = 135/254 (53.15%), Query Frame = 1 Query: 52 MHVRCGLMLDARKLFDEMPERDSASWMTMIGGLVDTGNFSEAFRLFLCMWEEINDGGSRTFVTMIRASAGLGLVQVGRQIHSCALKRGVGDDNFVSCSLIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYCGMRDSGATIDHFTISIVIRICARLASLEHAKQAHAALVR-HGYGTDIVANTALVDFYSKWGRMQDAQHVFNRMRCKNIIS-WNALIGGYGNHGQGEEAVEMFEQML 807
M+ + + D+ ++F + RD SW +++ G V G ++EA RLF M G+ F ++I A A L + +G+Q+H L+ G G + F++ +L+DMYSKCG+I+ A +FD+M V W +II +ALHG+ EA+SL+ M+ G + V+ C+ + ++ A ++ + +G ++ A+ D + G++++A + ++M + S W+ L+ H E A ++ E++
Sbjct: 286 MYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIF 539
BLAST of Vigun01g146900.1 vs. DB:Swiss
Match: PP206_ARATH (Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H36 PE=3 SV=1) HSP 1 Score: 409.838 bits (1052), Expect = 6.483e-133 Identity = 210/535 (39.25%), Postives = 315/535 (58.88%), Query Frame = 1 Query: 43 VLFMHVRCGLMLDARKLFDEMPERDSASWMTMIGGLVDTGNFSEAFRLFLCMWEEINDGGSRTFVTMIRASAGLGLVQVGRQIHSCALKRGVGDDNFVSCSLIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYCGMRDSGATIDHFTISIVIRICARLASLEHAKQAHAALVRHGYGTDIVANTALVDFYSKWGRMQDAQHVFNRMRCKNIISWNALIGGYGNHGQGEEAVEMFEQMLQEGMIPNHVTFLAVLSACSYSGLSERGWEIFHSMSRDHKVKPRAMHYACMIELLGREGLLDEAYALIRSAPFKPTTNMWAALLTACRMNENLELGKLAAEKLYGMEP-EKLCXXXXXXXXXXSCGKLKEAAGVLQTLKRKGLRMLSACSWIEVKKQPYVFLCGDKSHSQTKEIYDKVDSLMVEISRYGYAVENETLLPDVDEEEQ-RILKYHSEKLAIAFGLINTPYWTPLQITQGHRVCGDCHNAIKLIAKVTGREIVIKDASRFHHFRNGSCSCGDYW 1641
+L + + +L+ R LFDEMPE D S+ +I + + F M D + F TM+ +A L +Q+GRQ+H AL V SL+DMY+KC E+A +F +P++TTV W ++I+ Y G L L+ MR S D T + V++ A ASL KQ HA ++R G ++ + + LVD Y+K G ++DA VF M +N +SWNALI + ++G GE A+ F +M++ G+ P+ V+ L VL+ACS+ G E+G E F +MS + + P+ HYACM++LLGR G EA L+ PF+P MW+++L ACR+++N L + AAEKL+ ME YV + N+Y + G+ ++ V + ++ +G++ + A SW+EV + +VF D++H EI K++ L EI R GY + +++ DVDE+ + LKYHSE+LA+AF LI+TP P+ + + R C DCH AIKLI+K+ REI ++D SRFHHF G CSCGDYW
Sbjct: 291 ILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825 HSP 2 Score: 138.272 bits (347), Expect = 3.797e-33 Identity = 90/351 (25.64%), Postives = 173/351 (49.29%), Query Frame = 1 Query: 91 LFDEMPERDSASWMTMIGGLVDTGNFSEAFRLFLCMWEEINDGGSRTFVTMIRASAGLGLVQVGRQIHSCALKRGVGDDNFVSCSLIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYCGMRDSGATIDHFTISIVIRICARLASLEHAKQAHAALVRHGYGTDIVANTALVDFYSKWGRMQDAQHVFNRMRCKNIISWNALIGGYGNHGQGEEAVEMFEQMLQEGMIPNHVTFLAVLSACSYSGLSERGWEIFHSMSRDHKVKPRAMHYACMIELLGREGLLDEAYALIRSAPFKPTTNMWAALLTACRMNENLE--LGKLAAEKLYGMEPEKL 1137
LF+E+PE+DS ++ T+I G G ++E+ LFL M + + TF +++A GL +G+Q+H+ ++ G D V ++D YSK + + +FD+MPE V +N +I+SY+ E +L + M+ G +F + ++ I A L+SL+ +Q H + + + +LVD Y+K ++A+ +F + + +SW ALI GY G +++F +M + + TF VL A + G ++ + R ++ + ++++ + G + +A + P + + W AL++A N + E +G A G++P+ +
Sbjct: 206 LFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE-NVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVS-WNALISAHADNGDGEAAIGAFAKMIESGLQPDSV 554 HSP 3 Score: 134.42 bits (337), Expect = 7.814e-32 Identity = 90/339 (26.55%), Postives = 159/339 (46.90%), Query Frame = 1 Query: 55 HVRCGLMLDARKLFDEMPERDSASWMTMIGGLVDTGNFSEAFRLF--LCMWEEINDGGSRTFVTMIRASAGLGLVQVGRQIHSCALKRGVGDDNFVSCS--LIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYCGMRDSGATIDHFTISIVIRICARLASLEHAKQAHAALVRHGYGTDIVANTALVDFYSKWGRMQDAQHVFNRMRCKNIISWNALIGGYGNHGQGEEAVEMFEQMLQEGMIPNHVTFLAVLSACSYSGLSERGWEIFHSMSRDHKVKPRAMHYACMIELLGREGLLDEAYALIRSAPFKPTTNMWAALLT 1059
HV+ G + AR LFD MP+R +W ++G +F EAF+LF +C TF T++ Q+H+ A+K G + F++ S L+ Y + ++ A +F+++PEK +V +N++I Y G E++ L+ MR SG FT S V++ L +Q HA V G+ D ++DFYSK R+ + + +F+ M + +S+N +I Y Q E ++ F +M G + F +LS + + G ++ H + ++++ + + +EA + +S P + TT W AL++
Sbjct: 89 HVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQL-HCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP-QRTTVSWTALIS 425 HSP 4 Score: 85.8853 bits (211), Expect = 3.197e-16 Identity = 57/202 (28.22%), Postives = 97/202 (48.02%), Query Frame = 1 Query: 265 GLVQVGRQIHSCALKRGVGDDNFVSCSLIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYCGM-RDSGATI-DHFTISIVIRICARLASLEHAKQAHAALVRHGYGTD--IVANTALVDFYSKWGRMQDAQHVFNRMRCKNIISWNALIGGYGNHGQGEEAVEMFEQMLQEGMIPNHVTFLAVLSA 858
G V R+++ + N ++I + K G + A +FD MP++T V W ++ YA + + +EA L+ M R S T+ DH T + ++ C Q HA V+ G+ T+ + + L+ Y + R+ A +F + K+ +++N LI GY G E++ +F +M Q G P+ TF VL A
Sbjct: 62 GQVSAARKVYDEMPHKNTVSTN----TMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
BLAST of Vigun01g146900.1 vs. DB:Swiss
Match: PP147_ARATH (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H44 PE=2 SV=1) HSP 1 Score: 397.512 bits (1020), Expect = 1.519e-130 Identity = 209/542 (38.56%), Postives = 321/542 (59.23%), Query Frame = 1 Query: 28 PMMLWV---LFMHVRCGLMLDARKLFDEMPERDSASWMTMIGGLVDTGNFSEAFRLFLCMWEEINDGGSRTFVTMIRASAGLGLVQVGRQIHSCALKRGVGDDNFVSCSLIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYCGMRDSGATIDHFTISIVIRICARLASLEHAKQAHAALVRHGYGTDIVANTALVDFYSKWGRMQDAQHVFNRMRCKNIISWNALIGGYGNHGQGEEAVEMFEQMLQEGMIPNHVTFLAVLSACSYSGLSERGWEIFHSMSRDHKVKPRAMHYACMIELLGREGLLDEAYALIRSAPFKPTTNMWAALLTACRMNENLELGKLAAEKLYGMEPEKLCXXXXXXXXXXSCGKLKEAAGVLQTLKRKGLRMLSACSWIEVKKQPYVFLCGDKSHSQTKEIYDKVDSLMVEISRYGYAVENETLLPDVD-EEEQRILKYHSEKLAIAFGLINTPYWTPLQITQGHRVCGDCHNAIKLIAKVTGREIVIKDASRFHHFRNGSCSCGDYW 1641
PMM V + M+V+ L+ DA +LFD+MP+R+ SW TMI +A L + M + T+ +++R+ G+ V R +H +K G+ D FV +LID+++K G EDA VFD+M + WNSII +A + S+ AL L+ M+ +G + T++ V+R C LA LE QAH +V+ Y D++ N ALVD Y K G ++DA VFN+M+ +++I+W+ +I G +G +EA+++FE+M G PN++T + VL ACS++GL E GW F SM + + + P HY CMI+LLG+ G LD+A L+ +P W LL ACR+ N+ L + AA+K+ ++PE Y +L N+Y + K + ++ +G++ CSWIEV KQ + F+ GD SH Q E+ K++ L+ ++ GY E +L D++ E+ + L++HSEKLA+AFGL+ P ++I + R+CGDCH KL +K+ R IVI+D R+HHF++G CSCGDYW
Sbjct: 94 PMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630 HSP 2 Score: 57.7658 bits (138), Expect = 1.806e-7 Identity = 33/129 (25.58%), Postives = 65/129 (50.39%), Query Frame = 1 Query: 496 GMRDSGATIDHFTISIVIRICARLASLEHAKQAHAALVRHGYGTDIVANTALVDFYSKWGRMQDAQHVFNRMRCKNIISWNALIGGYGNHGQGEEAVEMFEQMLQEGMIPNHVTFLAVLSACSYSGLSE 882
++ G D T S +I+ C ++ L +G+ + L++ Y K+ + DA +F++M +N+ISW +I Y ++A+E+ ML++ + PN T+ +VL +C +G+S+
Sbjct: 51 SLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSC--NGMSD 177
BLAST of Vigun01g146900.1 vs. DB:Swiss
Match: PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1) HSP 1 Score: 402.134 bits (1032), Expect = 1.587e-130 Identity = 200/530 (37.74%), Postives = 329/530 (62.08%), Query Frame = 1 Query: 55 HVRCGLMLDARKLFDEMPERDSASWMTMIGGLVDTGNFSEAFRLFLCMWEEINDGGSRTFVTMIRASAGLGLVQVGRQIHSCALKRGVGDDNFVSCSLIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYCGMRDSGATIDHFTISIVIRICARLASLEHAKQAHAALVRHGYGTDIVANTALVDFYSKWGRMQDAQHVFNRMRCKNIISWNALIGGYGNHGQGEEAVEMFEQMLQEGMIPNHVTFLAVLSACSYSGLSERGWEIFHSMSRDHKVKPRAMHYACMIELLGREGLLDEAYALIRSAPFKPTTNMWAALLTACRMNENLELGKLAAEKLYGMEPEKLCXXXXXXXXXXSCGKLKEAAGVLQTLKRKGLRMLSACSWIEVKKQPYVFLCGDKSHSQTKEIYDKVDSLMVEISRYGYAVENETLLPDVDEEE-QRILKYHSEKLAIAFGLINTPYWTPLQITQGHRVCGDCHNAIKLIAKVTGREIVIKDASRFHHFRNGSCSCGDYW 1641
+ + G + +AR+LFDE P +D +W M+ G + EA LF +++ + ++ M+ +++ +++ R V N ++I Y++CG I +A +FD+MP++ V W ++IA Y+ G+S EAL L+ M G ++ + S + CA + +LE KQ H LV+ GY T AL+ Y K G +++A +F M K+I+SWN +I GY HG GE A+ FE M +EG+ P+ T +AVLSACS++GL ++G + F++M++D+ V P + HYACM++LLGR GLL++A+ L+++ PF+P +W LL A R++ N EL + AA+K++ MEPE YV+L NLY S G+ + + ++ KG++ + SWIE++ + + F GD+ H + EI+ ++ L + + + GY + +L DV+EEE +R+++YHSE+LA+A+G++ P+++ + RVC DCHNAIK +A++TGR I+++D +RFHHF++GSCSCGDYW
Sbjct: 260 YAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELF----DKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWN----TMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781 HSP 2 Score: 102.834 bits (255), Expect = 1.186e-21 Identity = 88/337 (26.11%), Postives = 154/337 (45.70%), Query Frame = 1 Query: 55 HVRCGLMLDARKLFDEMPERDSASWMTMIGGLVDTGNFSEAFRLFLCMWEEINDGGSRTFVTMIRASAGLGLVQVGRQIHSCALKRGVGDDNFVSCSLIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYCGMRDSGATIDHFTISIVIRICARLASLEHAKQAHAAL-VRHGYGTDIVANTALVDFYSKWGRMQDAQHVFNRMRCKNIISWNALIGGYGNHGQGEEAVEMFEQMLQEGMIPNHVTFLAVLSACSYSGLSERGWEIFHSMSRDHKVKPRAMHYACMIELLGREGLLDEAYALIRSAPFKPTTNMWAALLTA 1062
++R G ARKLFDEMPERD SW MI G V N +A LF M E R V N +++ Y++ G ++DA VFD+MPEK V WN+++++Y + EEA L+ R++ A + + + ++ + + A+Q ++ VR D+V+ ++ Y++ G++ +A+ +F+ +++ +W A++ GY + EEA E+F++M + N V++ A+L+ E E+F M + + MI + G + EA L P + + WAA++
Sbjct: 105 YLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPE-----------------------------------RDVCSWN----TMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKS-RENWALV---SWNCLLGGFVKKKKIVEARQFFDSMNVR-----DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCRN-----VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVS-WAAMIAG 383 HSP 3 Score: 73.9442 bits (180), Expect = 1.875e-12 Identity = 47/148 (31.76%), Postives = 72/148 (48.65%), Query Frame = 1 Query: 43 VLFMHVRCGLMLDARKLFDEMPERDSASWMTMIGGLVDTGNFSEAFRLFLCMWEEINDGGSRTFVTMIRASAGLGLVQVGRQ-IHSCALKRGVGDDNFVSCSLIDMYSKCGSIEDAHCVFDQMP-EKTTVGWNSIIASYALHGYSEEA 480
+L M+ +CG + +A LF EM +D SW TMI G G A R F M E T V ++ A + GLV GRQ ++ GV ++ ++D+ + G +EDAH + MP E W +++ + +HG +E A
Sbjct: 450 LLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELA 597
BLAST of Vigun01g146900.1 vs. DB:Swiss
Match: PP258_ARATH (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H34 PE=2 SV=1) HSP 1 Score: 396.356 bits (1017), Expect = 1.090e-129 Identity = 206/543 (37.94%), Postives = 328/543 (60.41%), Query Frame = 1 Query: 43 VLFMHVRCGLMLDARKLFDEMPERDSASWMTMIGGLVDTGNFSEAFRLFLCMWEEINDGGSRTF------VTMIRASAGLGLVQVGRQIHSCALKRGVGDDNFVSCSLIDMYSKCGS--IEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYCGM-RDSGATIDHFTISIVIRICARLASLEHAKQAHAALVRHGYGTDIVANTALVDFYSKWGRMQDAQHVFNRMRCKNIISWNALIGGYGNHGQGEEAVEMFEQMLQEGMIPNHVTFLAVLSACSYSGLSERGWEIFHSMSRDHKVKPRAMHYACMIELLGREGLLDEAYALIRSAPFKPTTNMWAALLTACRMNENLELGKLAAEKLYGMEPEKLCXXXXXXXXXXSCGKLKEAAGVLQTLKRKGLRMLSACSWIEVKKQPYVFLCGDKSHSQTKEIYDKVDSLMVEISRYGYAVENETLLPDVDEEEQRI-LKYHSEKLAIAFGLINTPYWTPLQITQGHRVCGDCHNAIKLIAKVTGREIVIKDASRFHHFRNGSCSCGDYW 1641
++ M+ CG + DARK+FDE+P+R+ SW +MI G GN +A LF + + ND F V++I A + + + IHS +KRG V +L+D Y+K G + A +FDQ+ +K V +NSI++ YA G S EA ++ + ++ T + T+S V+ + +L K H ++R G D++ T+++D Y K GR++ A+ F+RM+ KN+ SW A+I GYG HG +A+E+F M+ G+ PN++TF++VL+ACS++GL GW F++M V+P HY CM++LLGR G L +AY LI+ KP + +W++LL ACR+++N+EL +++ +L+ ++ Y++L ++Y G+ K+ V +K +GL S +E+ + +VFL GD+ H Q ++IY+ + L ++ GY ++ DVDEEE+ + L+ HSEKLAIAFG++NT + + + + RVC DCHN IKLI+K+ RE V++DA RFHHF++G CSCGDYW
Sbjct: 117 LIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659 HSP 2 Score: 130.954 bits (328), Expect = 6.026e-31 Identity = 81/271 (29.89%), Postives = 143/271 (52.77%), Query Frame = 1 Query: 91 LFDEMPER-DSASWMTMIGGLVDTGNFSEAFRLFLCMWEEINDGGSRTFVTMIRASAGLGLVQVGRQIHSCALKRGVGDDNFVSCSLIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYCGM------RDSGATIDHFTISIVIRICARLASLEHAKQAHAALVRHGYGTDIVANTALVDFYSKWGR--MQDAQHVFNRMRCKNIISWNALIGGYGNHGQGEEAVEMFEQMLQEGMIP-NHVTFLAVLSACSYSG 873
LF+ ++ D SW ++I L +G+ +EA F M + +F I+A + L + G+Q H A G D FVS +LI MYS CG +EDA VFD++P++ V W S+I Y L+G + +A+SL+ + D +D + VI C+R+ + + H+ +++ G+ + L+D Y+K G + A+ +F+++ K+ +S+N+++ Y G EA E+F ++++ ++ N +T VL A S+SG
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSG 301
BLAST of Vigun01g146900.1 vs. DB:Swiss
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1) HSP 1 Score: 395.201 bits (1014), Expect = 1.824e-127 Identity = 204/530 (38.49%), Postives = 319/530 (60.19%), Query Frame = 1 Query: 52 MHVRCGLMLDARKLFDEMPERDSASWMTMIGGLVDTGNFSEAFRLFLCMWEEINDGGSRTFVTMIRASAGLGLVQVGRQIHSCALKRGVGDDNFVSCSLIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYCGMRDSGATIDHFTISIVIRICARLASLEHAKQAHAALVRHGYGTDIVANTALVDFYSKWGRMQDAQHVFNRMRCKNIISWNALIGGYGNHGQGEEAVEMFEQMLQEGMIPNHVTFLAVLSACSYSGLSERGWEIFHSMSRDHKVKPRAMHYACMIELLGREGLLDEAYALIRSAPFKPTTNMWAALLTACRMNENLELGKLAAEKLYGMEPEKLCXXXXXXXXXXSCGKLKEAAGVLQTLKRKGLRMLSACSWIEVKKQPYVFLCGDKSHSQTKEIYDKVDSLMVEISRYGYAVENETLLPDVDEEEQRILKYHSEKLAIAFGLINTPYWTPLQITQGHRVCGDCHNAIKLIAKVTGREIVIKDASRFHHFRNGSCSCGDYW 1641
M+ +CG + AR+LFD M ER+ SW +MI V N EA +F M +E + + + A A LG ++ GR IH +++ G+ + V SLI MY KC ++ A +F ++ +T V WN++I +A +G +AL+ + MR D FT VI A L+ HAK H ++R ++ TALVD Y+K G + A+ +F+ M +++ +WNA+I GYG HG G+ A+E+FE+M + + PN VTFL+V+SACS+SGL E G + F+ M ++ ++ HY M++LLGR G L+EA+ I P KP N++ A+L AC++++N+ + AAE+L+ + P+ +V+L N+Y + ++ V ++ R+GLR CS +E+K + + F G +H +K+IY ++ L+ I GY + +L ++ ++++L HSEKLAI+FGL+NT T + + + RVC DCHNA K I+ VTGREIV++D RFHHF+NG+CSCGDYW
Sbjct: 280 MYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809 HSP 2 Score: 167.933 bits (424), Expect = 4.536e-43 Identity = 86/271 (31.73%), Postives = 147/271 (54.24%), Query Frame = 1 Query: 52 MHVRCGLMLDARKLFDEMPERDSASWMTMIGGLVDTGNFSEAFRLFLCMWEEINDGGSRTFVTMIRASAGLGLVQVGRQIHSCALKRGVGDDNFVSCSLIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYCGMRDSGATIDHFTISIVIRICARLASLEHAKQAHAALVRHGYGTDIVANTALVDFYSKWGRMQDAQHVFNRMRCKNIISWNALIGGYGNHGQGEEAVEMFEQMLQEGMIPNHVTFLAVLSACS 864
M+ +C + +ARK+FD MPERD SW T++ G G A + M EE T V+++ A + L L+ VG++IH A++ G +S +L+DMY+KCGS+E A +FD M E+ V WNS+I +Y + +EA+ ++ M D G ++ + CA L LE + H V G ++ +L+ Y K + A +F +++ + ++SWNA+I G+ +G+ +A+ F QM + P+ T+++V++A +
Sbjct: 179 MYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIA 449 HSP 3 Score: 155.606 bits (392), Expect = 5.914e-39 Identity = 84/284 (29.58%), Postives = 152/284 (53.52%), Query Frame = 1 Query: 61 RCGLMLDARKLFDEMPERDSASWMTMIGGLVDTGNFSEAFRLFLCMWEEINDGGSRTFVTMIRASAGLGLVQVGRQIHSCALKRGVGDDNFVSCSLIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYCGMRDSGATIDHFTISIVIRICARLASLEHAKQAHAALVRHGYGTDIVANTALVDFYSKWGRMQDAQHVFNRMRCKNIISWNALIGGYGNHGQGEEAVEMFEQMLQEGMIPNHVTFLAVLSACSYSGLSERGWEIFHSMS 912
R G + +A ++F+ + + + + TM+ G + +A + F+ M + + F +++ ++VG++IH +K G D F L +MY+KC + +A VFD+MPE+ V WN+I+A Y+ +G + AL + M + TI V+ + L + K+ H +R G+ + + +TALVD Y+K G ++ A+ +F+ M +N++SWN++I Y + +EA+ +F++ML EG+ P V+ + L AC+ G ERG H +S
Sbjct: 81 RYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG-RFIHKLS 363 HSP 4 Score: 121.709 bits (304), Expect = 1.063e-27 Identity = 73/284 (25.70%), Postives = 142/284 (50.00%), Query Frame = 1 Query: 283 RQIHSCALKRGVGDDNFVSCSLIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYCGMRDSGATIDHFTISIVIRICARLASLEHAKQAHAALVRHGYGTDIVANTALVDFYSKWGRMQDAQHVFNRMRCKNIISWNALIGGYGNHGQGEEAVEMFEQMLQEGMIPNHVTFLAVLSACSYSGLSERGWEIFHSMSRDHKVKPRAMHYACMIELLGREGLLDEAYALIRSAPFKPTTNMWAALLTACRMNENLELGKLAAEKLY--GMEP 1128
RQI K G+ ++F L+ ++ + GS+++A VF+ + K V +++++ +A ++AL + MR + + ++++C A L K+ H LV+ G+ D+ A T L + Y+K ++ +A+ VF+RM ++++SWN ++ GY +G A+EM + M +E + P+ +T ++VL A S L G EI H + ++++ + G L+ A L + W +++ A NEN + L +K+ G++P
Sbjct: 54 RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEI-HGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLF-DGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKP 335
BLAST of Vigun01g146900.1 vs. DB:Swiss
Match: PPR53_ARATH (Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H21 PE=2 SV=2) HSP 1 Score: 392.504 bits (1007), Expect = 5.934e-127 Identity = 216/601 (35.94%), Postives = 327/601 (54.41%), Query Frame = 1 Query: 52 MHVRCGLMLDARKLFDEMPERDSASWMTMIGGLVDTGNFSEAFRLF-----------LCMWEEINDGGSRT-----FVTMIRASAGLG-------------------LVQVGRQIHSCALKRGVGDDNFVSCSLIDMYSKCGSIEDAHCVFDQMP-----------------------------------EKTTVGWNSIIASYALHGYSEEALSLYCGMRDSGATIDHFTISIVIRICARLASLEHAKQAHAALVRHGYGTDIVANTALVDFYSKWGRMQDAQHVFNRMRCKNIISWNALIGGYGNHGQGEEAVEMFEQMLQEGMIPNHVTFLAVLSACSYSGLSERGWEIFHSMSRDHKVKPRAMHYACMIELLGREGLLDEAYALIRSAPFKPTTNMWAALLTACRMNENLELGKLAAEKLYGMEPEKLCXXXXXXXXXXSCGKLKEAAGVLQTLKRKGLRMLSACSWIEVKKQPYVFLCGDKSHSQTKEIYDKVDSLMVEISRYGYAVENETLLPDVDEEEQ-RILKYHSEKLAIAFGLINTPYWTPLQITQGHRVCGDCHNAIKLIAKVTGREIVIKDASRFHHFRNGSCSCGDYW 1641
M++RCG M DARK+FD M ++D + ++ G E R+ + W I G +R+ V M + LG ++ +GR IH +K+G+ D V ++IDMY K G + +F+Q E V W SIIA A +G EAL L+ M+ +G +H TI ++ C +A+L H + H VR ++ +AL+D Y+K GR+ +Q VFN M KN++ WN+L+ G+ HG+ +E + +FE +++ + P+ ++F ++LSAC GL++ GW+ F MS ++ +KPR HY+CM+ LLGR G L EAY LI+ PF+P + +W ALL +CR+ N++L ++AAEKL+ +EPE YV+L N+Y + G E + ++ GL+ CSWI+VK + Y L GDKSH Q +I +K+D + E+ + G+ + L DV+E+EQ ++L HSEKLA+ FGL+NTP TPLQ+ + R+CGDCH IK I+ GREI I+D +RFHHF++G CSCGD+W
Sbjct: 160 MYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760 HSP 2 Score: 109.383 bits (272), Expect = 8.689e-24 Identity = 101/440 (22.95%), Postives = 181/440 (41.14%), Query Frame = 1 Query: 79 DARKLFDEMPERDSASWMTMIGGLVDTGNFSEAFRLFLCMWEEINDGGSRTFVTMIRASAGLGLVQVGRQIHSCALKRGVGDDNFVSCSLIDMYSKCGSIEDAHCVFDQMPEK-----------------------------------TTVGWNSIIASYALHGYSEEALSLYCGMRDSGATIDHFTISIVIRICARLASLEHAKQAHAALVRHGYGTDIVANTALVDFYSKWGRMQDAQHVFNRMRCKNIISWNALIGGYGNHGQGEEAVEMFEQMLQEGMIPNHVTFLAVLSACSYSGLSERGWEIFHSMSRDHKVKPRAMHYACMIELLGREGLLD---EAYALIRSAPFKPTTNMWAALLTACRMNENLELGKLAAEKLYGMEPEK-LCXXXXXXXXXXSCGKLKEAAGVLQTLKRKGLR--------MLSACSWI 1257
DA + +P+ S+ ++I L F+++ +F M+ S + + A L +VG+QIH + G+ D FV S+ MY +CG + DA VFD+M +K V WN I++ + GY +EA+ ++ + G D T+S V+ L + H +++ G D +A++D Y K G + +FN+ NA I G +G ++A+EMFE ++ M N V++ ++++ C+ +G E+F M + VKP + M+ G L + ++ +AL+ + L ++ ++ M P K L + L+N ++ GK KE + ++L R L+ +LSAC +
Sbjct: 68 DADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM-QVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQI----VFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQV 502 HSP 3 Score: 98.5969 bits (244), Expect = 2.666e-20 Identity = 56/208 (26.92%), Postives = 99/208 (47.60%), Query Frame = 1 Query: 286 QIHSCALKRGVGDDNFVSCSLIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYCGMRDSGATIDHFTISIVIRICARLASLEHAKQAHAALVRHGYGTDIVANTALVDFYSKWGRMQDAQHVFNRMRCKNIISWNALIGGYGNHGQGEEAVEMFEQMLQEGMIPNHVTFLAVLSACSYSGLSERGWEIFHSM 909
Q H+ LK G +D ++S LI YS DA V +P+ T ++S+I + +++ ++ M G D + + ++CA L++ + KQ H G D ++ Y + GRM DA+ VF+RM K++++ +AL+ Y G EE V + +M G+ N V++ +LS + SG + +F +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKI 243
BLAST of Vigun01g146900.1 vs. DB:Swiss
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1) HSP 1 Score: 389.808 bits (1000), Expect = 1.101e-126 Identity = 202/536 (37.69%), Postives = 324/536 (60.45%), Query Frame = 1 Query: 43 VLFMHVRCGLMLDARKLFD--EMPERDSASWMTMIGGLVDTGNFSEAFRLFLCMWEEINDGGSRTFVTMIRASAGLGLVQVGRQIHSCALKRGVGDDNFVSCSLIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYCGMRDSGATIDHFTISIVIRICARLASLEHAKQAHAALVRHGYGTDIVANTALVDFYSKWGRMQDAQHVFNRMRCKNIISWNALIGGYGNHGQGEEAVEMFEQMLQEGMIPNHVTFLAVLSACSYSGLSERGWEIFHSMSRDHKVKPRAMHYACMIELLGREGLLDEAYALIRSAPFKPTTNMWAALLTACRMNENLELGKLAAEKLYGMEPEKLCXXXXXXXXXXSCGKLKEAAGVLQTLKRKGLRMLSACSWIEVKKQPYVFLCGDKSHSQTKEIYDKVDSLMVEISRYGYAVENETLLPDV-DEEEQRILKYHSEKLAIAFGLINTPYWTPLQITQGHRVCGDCHNAIKLIAKVTGREIVIKDASRFHHFRNGSCSCGDYW 1641
++ ++ +C + AR +F+ +PER SW ++ G EA +F M + V+++ A L ++ GR IH+ +K G+ + + SL MY+KCG + A +FD+M + WN++I+ YA +GY+ EA+ ++ M + D +I+ I CA++ SLE A+ + + R Y D+ ++AL+D ++K G ++ A+ VF+R ++++ W+A+I GYG HG+ EA+ ++ M + G+ PN VTFL +L AC++SG+ GW F+ M+ DHK+ P+ HYAC+I+LLGR G LD+AY +I+ P +P +W ALL+AC+ + ++ELG+ AA++L+ ++P +YV L NLY + A V +K KGL CSW+EV+ + F GDKSH + +EI +V+ + + G+ + L D+ DEE + L HSE++AIA+GLI+TP TPL+IT+ R C +CH A KLI+K+ REIV++D +RFHHF++G CSCGDYW
Sbjct: 160 LIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694 HSP 2 Score: 157.532 bits (397), Expect = 8.115e-40 Identity = 89/328 (27.13%), Postives = 168/328 (51.22%), Query Frame = 1 Query: 82 ARKLFDEMPERDSASWMTMIGGLVDTGNFSEAFRLFLCMWEEINDGGSRTFVTMIRASAGLGLVQVGRQIHSCALKRGVGDDNFVSCSLIDMYSKCGSIEDAHCVFD--QMPEKTTVGWNSIIASYALHGYSEEALSLYCGMRDSGATIDHFTISIVIRICARLASLEHAKQAHAALVRHGYGTDIVANTALVDFYSKWGRMQDAQHVFNRMRCKNIISWNALIGGYGNHGQGEEAVEMFEQMLQEGMIPNHVTFLAVLSACSYSGLSERGWEIFHSMSRDHKVKPRAMHYACMIELLGREGLLDEAYALIRSAPFKPTTNMWAALLT 1059
AR++FD++P W +I G +F +A ++ M S TF +++A +GL +Q+GR +H+ + G D FV LI +Y+KC + A VF+ +PE+T V W +I+++YA +G EAL ++ MR D + V+ L L+ + HA++V+ G + +L Y+K G++ A+ +F++M+ N+I WNA+I GY +G EA++MF +M+ + + P+ ++ + +SAC+ G E+ ++ + R + + +I++ + G + E L+ +W+A++
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS-DYRDDVFISSALIDMFAKCGSV-EGARLVFDRTLDRDVVVWSAMIV 397 HSP 3 Score: 112.849 bits (281), Expect = 5.829e-25 Identity = 60/194 (30.93%), Postives = 104/194 (53.61%), Query Frame = 1 Query: 283 RQIHSCALKRGVGDDNFVSCSLIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYCGMRDSGATIDHFTISIVIRICARLASLEHAKQAHAALVRHGYGTDIVANTALVDFYSKWGRMQDAQHVFNRMRC--KNIISWNALIGGYGNHGQGEEAVEMFEQMLQEGMIPNHVTFLAVLSA 858
+QIH+ L G+ F+ LI S G I A VFD +P WN+II Y+ + + ++AL +Y M+ + + D FT +++ C+ L+ L+ + HA + R G+ D+ L+ Y+K R+ A+ VF + + I+SW A++ Y +G+ EA+E+F QM + + P+ V ++VL+A
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNA 231 The following BLAST results are available for this feature:
BLAST of Vigun01g146900.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun01g146900.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g146900.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g146900.1; organism=Vigna unguiculata; type=mRNA; length=2275bpback to top protein sequence of Vigun01g146900.1_Vu_IT97K-499-35_v1.1 >Vigun01g146900.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g146900.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g146900.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=548bpback to top mRNA from alignment at Vu01:32860196..32862571+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun01g146900.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g146900.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g146900.1; organism=Vigna unguiculata; type=mRNA; length=2376bp; location=Sequence derived from: Vu01:32860196..32862571+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu01:32860196..32862571+ >Vigun01g146900.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g146900.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g146900.1; organism=Vigna unguiculata; type=CDS; length=1644bp; location=Sequence derived from: Vu01:32860196..32862571+ (Vigna unguiculataback to top |