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Transcript Overview
| Name | Vigun01g160700.1 |
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| Unique Name | Vigun01g160700.1_Vu_IT97K-499-35_v1.1 |
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| Type | mRNA |
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| Organism | Vigna unguiculata (cowpea) |
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| Sequence length | 1335 |
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks
Orthologs
Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
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| Vigun01g160700.1 | Vigun01g160700.1_Vu_IT97K-499-35_v1.1-protein | Vigna unguiculata | polypeptide |
| Vigun01g160700.1_Vu_IT97K-499-35_v1.1 | Vigun01g160700.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | polypeptide |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Vigun01g160700.1.v1.1.CDS.1 | Vigun01g160700.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
| Vigun01g160700.1.v1.1.CDS.2 | Vigun01g160700.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 148..177 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 161..177 |
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun01g160700.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g160700.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g160700.1; organism=Vigna unguiculata; type=mRNA; length=1335bp
ATGAGCGACCACCACCCACGGCTGCATCACCTTCGTTCCACATCGCACCT
ATTGAAGGAATCTCTGTCATCATTCTCATCCAATTTCATCACATTCCTTT
TCCTCTCTTTGCTAACCCTCTCCTTCCGAACCCTTGTCGAGACAGGCACC
GCCCATGTCACCTCCTTCATCGACCGCGACCCTTCCCTCCGGGCCCTCCT
CTCCCGGCTCGACCTCGCCGGCAACGCccaccatcacgaccacggccacg
acctcccatccacagctgccaaccacgccctccgccaccgacgccgcccc
ttcctccaccTCACCCGCGTCGGAACCCTAGACGATGACTTCTTCTCcgg
cgacgacgacgacgacCGCTCCCTCTTCGCCTTCTCCGATCTCCTCGCCG
ACGACGGAGTTAGGGTTTCTCAAGTCATCCGCTCTGGAACCACCTTCAAT
ACCCAAGGATTGTCCTCCCCGTCGTCGCGAACGCCTCGCGACGACGATAG
CGAGGAGGAGAAGCGAAACGAGAACGCGGAGAGGAAGGAGGGCGTGGATT
TGCAATTTTTCGTGAAGGGGATCGAGGTGGGTCGTCGGGACGCGGCGGCG
CTGTTTTTTCTGGTGAGTTTCCTCTCCGCCGCCTACGGATGGGTGATTCT
CGTTTTTCTCGTGACGTATTCGTGGGTGTTGGGTGTTGTGTACGTTTCCG
TTGTGAATGATCTGTTGGGGAGGTTTAGCTCCGTTACGGTTTTGGTTTGG
GATGGTTCGAGGTTAGGTCTGAAGAGGCTTTCGGGGTTTATTCTGATGCG
TTGGGCTGTGAGGGACGCGTTGACTCAGCTTCTGGGGTTGTGGTACTTCG
GAGAAATTGAGGATCAGTACTCGTTTTTCAAGCTCTTTGTGAGGTTGAAA
TTGATGCCCTTCTCTGTTATGTCTCCTTGGGTTAGGGGATTTGAGAGAGA
GATTTCTGGGTTCTTGTTTACTTGGTTTCTGGTGGATACTTTTGTTGCTT
TTATATTCTCTGTGGATGCTTGGGTTGCCATTGTGGACTCAAGGAAGAGT
GGGAGGGAGATTGTGAAGGAAGGGTGCTATTTGATATCTACTATGTTCAA
CCAGGCTATTCAGGTTAAGTGCTTGGAGGCTATACTTTGTGGGTCCTTTG
TCAGGTGGGGTTTAGGCCGGGTTTGCGGGAGGTCCTTCGCCAAGATGTTT
CAGTCCACCATGGAGGTTTACTTCATGGTTACTTGGCTTTTGTTTTACTT
TGCGGCAAGGTGTAGGGACGCTGATCTTCATGGTAGGAGATTTGGACAGA
GGGAATTAGAGGGCTTGGTTGAAGGTCTAAGATGA back to topprotein sequence of Vigun01g160700.1_Vu_IT97K-499-35_v1.1 >Vigun01g160700.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g160700.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g160700.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=445bp
MSDHHPRLHHLRSTSHLLKESLSSFSSNFITFLFLSLLTLSFRTLVETGT
AHVTSFIDRDPSLRALLSRLDLAGNAHHHDHGHDLPSTAANHALRHRRRP
FLHLTRVGTLDDDFFSGDDDDDRSLFAFSDLLADDGVRVSQVIRSGTTFN
TQGLSSPSSRTPRDDDSEEEKRNENAERKEGVDLQFFVKGIEVGRRDAAA
LFFLVSFLSAAYGWVILVFLVTYSWVLGVVYVSVVNDLLGRFSSVTVLVW
DGSRLGLKRLSGFILMRWAVRDALTQLLGLWYFGEIEDQYSFFKLFVRLK
LMPFSVMSPWVRGFEREISGFLFTWFLVDTFVAFIFSVDAWVAIVDSRKS
GREIVKEGCYLISTMFNQAIQVKCLEAILCGSFVRWGLGRVCGRSFAKMF
QSTMEVYFMVTWLLFYFAARCRDADLHGRRFGQRELEGLVEGLR* back to topmRNA from alignment at Vu01:34262057..34263456+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Vigun01g160700.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g160700.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g160700.1; organism=Vigna unguiculata; type=mRNA; length=1400bp; location=Sequence derived from: Vu01:34262057..34263456+ (Vigna unguiculata
ATGAGCGACCACCACCCACGGCTGCATCACCTTCGTTCCACATCGCACCT
ATTGAAGGAATCTCTGTCATCATTCTCATCCAATTTCATCACATTCCTTT
TCCTCTCTTTGCTAACCCTCTCCTTCCGAACCCTTGTCGAGACAGGCACC
GCCCATGTCACCTCCTTCATCGACCGCGACCCTTCCCTCCGGGCCCTCCT
CTCCCGGCTCGACCTCGCCGGCAACGCCCACCATCACGACCACGGCCACG
ACCTCCCATCCACAGCTGCCAACCACGCCCTCCGCCACCGACGCCGCCCC
TTCCTCCACCTCACCCGCGTCGGAACCCTAGACGATGACTTCTTCTCCGG
CGACGACGACGACGACCGCTCCCTCTTCGGCTCCATCCCCAAATCCCCCG
CCAACGCCACTCTTCTCACCCTCTTCCCCTTTTCCCCACCTCAGCCTTCT
CCGATCTCCTCGCCGACGACGGAGTTAGGGTTTCTCAAGTCATCCGCTCT
GGAACCACCTTCAATACCCAAGGATTGTCCTCCCCGTCGTCGCGAACGCC
TCGCGACGACGATAGCGAGGAGGAGAAGCGAAACGAGAACGCGGAGAGGA
AGGAGGGCGTGGATTTGCAATTTTTCGTGAAGGGGATCGAGGTGGGTCGT
CGGGACGCGGCGGCGCTGTTTTTTCTGGTGAGTTTCCTCTCCGCCGCCTA
CGGATGGGTGATTCTCGTTTTTCTCGTGACGTATTCGTGGGTGTTGGGTG
TTGTGTACGTTTCCGTTGTGAATGATCTGTTGGGGAGGTTTAGCTCCGTT
ACGGTTTTGGTTTGGGATGGTTCGAGGTTAGGTCTGAAGAGGCTTTCGGG
GTTTATTCTGATGCGTTGGGCTGTGAGGGACGCGTTGACTCAGCTTCTGG
GGTTGTGGTACTTCGGAGAAATTGAGGATCAGTACTCGTTTTTCAAGCTC
TTTGTGAGGTTGAAATTGATGCCCTTCTCTGTTATGTCTCCTTGGGTTAG
GGGATTTGAGAGAGAGATTTCTGGGTTCTTGTTTACTTGGTTTCTGGTGG
ATACTTTTGTTGCTTTTATATTCTCTGTGGATGCTTGGGTTGCCATTGTG
GACTCAAGGAAGAGTGGGAGGGAGATTGTGAAGGAAGGGTGCTATTTGAT
ATCTACTATGTTCAACCAGGCTATTCAGGTTAAGTGCTTGGAGGCTATAC
TTTGTGGGTCCTTTGTCAGGTGGGGTTTAGGCCGGGTTTGCGGGAGGTCC
TTCGCCAAGATGTTTCAGTCCACCATGGAGGTTTACTTCATGGTTACTTG
GCTTTTGTTTTACTTTGCGGCAAGGTGTAGGGACGCTGATCTTCATGGTA
GGAGATTTGGACAGAGGGAATTAGAGGGCTTGGTTGAAGGTCTAAGATGA
back to topCoding sequence (CDS) from alignment at Vu01:34262057..34263456+ >Vigun01g160700.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g160700.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g160700.1; organism=Vigna unguiculata; type=CDS; length=1335bp; location=Sequence derived from: Vu01:34262057..34263456+ (Vigna unguiculata
ATGAGCGACCACCACCCACGGCTGCATCACCTTCGTTCCACATCGCACCT
ATTGAAGGAATCTCTGTCATCATTCTCATCCAATTTCATCACATTCCTTT
TCCTCTCTTTGCTAACCCTCTCCTTCCGAACCCTTGTCGAGACAGGCACC
GCCCATGTCACCTCCTTCATCGACCGCGACCCTTCCCTCCGGGCCCTCCT
CTCCCGGCTCGACCTCGCCGGCAACGCCCACCATCACGACCACGGCCACG
ACCTCCCATCCACAGCTGCCAACCACGCCCTCCGCCACCGACGCCGCCCC
TTCCTCCACCTCACCCGCGTCGGAACCCTAGACGATGACTTCTTCTCCGG
CGACGACGACGACGACCGCTCCCTCTTCGCCTTCTCCGATCTCCTCGCCG
ACGACGGAGTTAGGGTTTCTCAAGTCATCCGCTCTGGAACCACCTTCAAT
ACCCAAGGATTGTCCTCCCCGTCGTCGCGAACGCCTCGCGACGACGATAG
CGAGGAGGAGAAGCGAAACGAGAACGCGGAGAGGAAGGAGGGCGTGGATT
TGCAATTTTTCGTGAAGGGGATCGAGGTGGGTCGTCGGGACGCGGCGGCG
CTGTTTTTTCTGGTGAGTTTCCTCTCCGCCGCCTACGGATGGGTGATTCT
CGTTTTTCTCGTGACGTATTCGTGGGTGTTGGGTGTTGTGTACGTTTCCG
TTGTGAATGATCTGTTGGGGAGGTTTAGCTCCGTTACGGTTTTGGTTTGG
GATGGTTCGAGGTTAGGTCTGAAGAGGCTTTCGGGGTTTATTCTGATGCG
TTGGGCTGTGAGGGACGCGTTGACTCAGCTTCTGGGGTTGTGGTACTTCG
GAGAAATTGAGGATCAGTACTCGTTTTTCAAGCTCTTTGTGAGGTTGAAA
TTGATGCCCTTCTCTGTTATGTCTCCTTGGGTTAGGGGATTTGAGAGAGA
GATTTCTGGGTTCTTGTTTACTTGGTTTCTGGTGGATACTTTTGTTGCTT
TTATATTCTCTGTGGATGCTTGGGTTGCCATTGTGGACTCAAGGAAGAGT
GGGAGGGAGATTGTGAAGGAAGGGTGCTATTTGATATCTACTATGTTCAA
CCAGGCTATTCAGGTTAAGTGCTTGGAGGCTATACTTTGTGGGTCCTTTG
TCAGGTGGGGTTTAGGCCGGGTTTGCGGGAGGTCCTTCGCCAAGATGTTT
CAGTCCACCATGGAGGTTTACTTCATGGTTACTTGGCTTTTGTTTTACTT
TGCGGCAAGGTGTAGGGACGCTGATCTTCATGGTAGGAGATTTGGACAGA
GGGAATTAGAGGGCTTGGTTGAAGGTCTAAGATGA back to top
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