Vigun05g230600.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun05g230600.1 vs. DB:Swiss
Match: Y1497_ARATH (Probable receptor-like protein kinase At1g49730 OS=Arabidopsis thaliana OX=3702 GN=At1g49730 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.147e-41 Identity = 110/310 (35.48%), Postives = 171/310 (55.16%), Query Frame = 1 Query: 46 LHRSRSGAVFFVRRISYKDVRRATDGFHRIVYSNSDVSAYAARFEDSGGLCLVREVKGFDEGSDH-FYRHVQFLGXXXXXXXXSLKGFSVGRNRKRLLIFDNIENGSLKDHLNDPLKTPLDWRTRLQIANGVVAALEYLFLFSEPPVCHVSITSSNIMLDENFTAKLSDFGLLPSG--GNSDMMPYSEDC----------------LKQKSCRIIFQLGVLILELVTGQSSEMEGSDLIEWIQESRFYSSIDK---MIDP---DLGNNYDCTELKSLLAVAKLCIKSWDKPSFTIPQLFRHLQRKIDITH 900 +H S + F R+ SYK++ AT+ F+ ++ + Y A F D G + V+++ E ++ F R + L +L HR+L++LKGF + + ++R L++D ++NGSLKDHL+ K P W TR++IA V ALEYL + +PP+CH I SSNI+LDENF AKLSDFGL S G+ P + D L +KS ++ GV++LEL+TG+ + EG +L+E Q RF + K ++DP D N+ +L +++ V +LC + + +I Q+ R L D H Sbjct: 305 IHEDDSSSAF--RKFSYKEMTNATNDFNTVIGQGGFGTVYKAEFND-GLIAAVKKMNKVSEQAEQDFCREIGLLAKLHHRNLVALKGFCINK-KERFLVYDYMKNGSLKDHLHAIGKPPPSWGTRMKIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLSDFGLAHSSRDGSVCFEPVNTDIRGTPGYVDPEYVVTQELTEKS--DVYSYGVVLLELITGRRAVDEGRNLVEMSQ--RFLLAKSKHLELVDPRIKDSINDAGGKQLDAVVTVVRLCTEKEGRSRPSIKQVLRLLCESCDPVH 606
BLAST of Vigun05g230600.1 vs. DB:Swiss
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana OX=3702 GN=At4g20450 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.081e-26 Identity = 89/296 (30.07%), Postives = 137/296 (46.28%), Query Frame = 1 Query: 55 SRSGAVFFVRRISYKDVRRATDGFHRIVYSNSDVSAYAARFEDSGGLCLVREVKGFDEGSDHFYRHVQFLGXXXXXXXXSLKGFSVGRNRKRLLIFDNIENGSLKDHLN-DPLKTPLDWRTRLQIANGVVAALEYLFLFSEPPVCHVSITSSNIMLDENFTAKLSDFGL---LPSG-------------GNSDMMPYSEDCLKQKSCRIIFQLGVLILELVTGQS---SEMEGSDLIEWIQESRFYSSIDKMIDPDLGNNYDCTELKSLLAVAKLCIKSWDKPSFTIPQLFRHLQR 882 SRS V R +Y++V T+ F R + Y D+ + + + +G F V L R+ H +L++L G+ + +LI++ + NG+LK HL+ + ++PL W RL+IA LEYL + +PP+ H I S NI+LD NF AKL DFGL P G G D Y + L +KS +F GV++LE++T Q E S + EW+ I ++DP + +YD + L L +A C+ + Q+ LQ Sbjct: 570 SRSSMVANKRSYTYEEVAVITNNFERPLGEGGFGVVYHGNVNDNEQVAVKVLSESSAQGYKQFKAEVDLLLRVHHINLVTLVGY-CDEGQHLVLIYEYMSNGNLKQHLSGENSRSPLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETHVSTNVAGSPGYLDPEYYRTNWLTEKSD--VFSFGVVLLEIITSQPVIDQTREKSHIGEWVGFKLTNGDIKNIVDPSMNGDYDSSSLWKALELAMSCVSPSSSGRPNMSQVANELQE 862
BLAST of Vigun05g230600.1 vs. DB:Swiss
Match: BAK1_ORYSJ (LRR receptor kinase BAK1 OS=Oryza sativa subsp. japonica OX=39947 GN=BAK1 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.004e-25 Identity = 92/320 (28.75%), Postives = 148/320 (46.25%), Query Frame = 1 Query: 40 AWLHRSRSGAVFF--------------VRRISYKDVRRATDGF--HRIVYSNSDVSAYAARFEDSGGLCLVREVKG--FDEGSDHFYRHVQFLGXXXXXXXXSLKGFSVGRNRKRLLIFDNIENGSLKDHLND--PLKTPLDWRTRLQIANGVVAALEYLFLFSEPPVCHVSITSSNIMLDENFTAKLSDFGLLP-------------SGGNSDMMPYSEDCLKQKSCRIIFQLGVLILELVTGQS----SEMEGSD---LIEWIQESRFYSSIDKMIDPDLGNNYDCTELKSLLAVAKLCIKSWDKPSFTIPQLFRHLQ 879 AW R + FF ++R S ++++ ATD F I+ Y R D G L V+ +K G F V+ + HR+LL L+GF + +RLL++ + NGS+ L + P + PLDWRTR +IA G L YL +P + H + ++NI+LDE+F A + DFGL G + P K +F G+++LEL+TGQ + + D L++W++ ++ ++DPDL +NY E++SL+ VA LC + + ++ R L+ Sbjct: 259 AWYRRRKPQEHFFDVPAEEDPEVHLGQLKRFSLRELQVATDTFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT-ERLLVYPYMANGSVASRLRERPPSEPPLDWRTRRRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKRLEMLVDPDLQSNYIDVEVESLIQVALLCTQGSPTERPKMAEVVRMLE 576
BLAST of Vigun05g230600.1 vs. DB:Swiss
Match: BAK1_ORYSI (LRR receptor kinase BAK1 OS=Oryza sativa subsp. indica OX=39946 GN=BAK1 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.148e-25 Identity = 92/320 (28.75%), Postives = 148/320 (46.25%), Query Frame = 1 Query: 40 AWLHRSRSGAVFF--------------VRRISYKDVRRATDGF--HRIVYSNSDVSAYAARFEDSGGLCLVREVKG--FDEGSDHFYRHVQFLGXXXXXXXXSLKGFSVGRNRKRLLIFDNIENGSLKDHLND--PLKTPLDWRTRLQIANGVVAALEYLFLFSEPPVCHVSITSSNIMLDENFTAKLSDFGLLP-------------SGGNSDMMPYSEDCLKQKSCRIIFQLGVLILELVTGQS----SEMEGSD---LIEWIQESRFYSSIDKMIDPDLGNNYDCTELKSLLAVAKLCIKSWDKPSFTIPQLFRHLQ 879 AW R + FF ++R S ++++ ATD F I+ Y R D G L V+ +K G F V+ + HR+LL L+GF + +RLL++ + NGS+ L + P + PLDWRTR +IA G L YL +P + H + ++NI+LDE+F A + DFGL G + P K +F G+++LEL+TGQ + + D L++W++ ++ ++DPDL +NY E++SL+ VA LC + + ++ R L+ Sbjct: 259 AWYRRRKPQEHFFDVPAEEDPEVHLGQLKRFSLRELQVATDTFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT-ERLLVYPYMANGSVASRLRERPPSEPPLDWRTRRRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKRLEMLVDPDLQSNYIDVEVESLIQVALLCTQGSPTERPKMAEVVRMLE 576
BLAST of Vigun05g230600.1 vs. DB:Swiss
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=SERK1 PE=1 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 9.809e-25 Identity = 88/303 (29.04%), Postives = 141/303 (46.53%), Query Frame = 1 Query: 40 AWLHRSRSGAVFF--------------VRRISYKDVRRATDGF--HRIVYSNSDVSAYAARFEDSGGLCLVREVKG--FDEGSDHFYRHVQFLGXXXXXXXXSLKGFSVGRNRKRLLIFDNIENGSLKDHLND--PLKTPLDWRTRLQIANGVVAALEYLFLFSEPPVCHVSITSSNIMLDENFTAKLSDFGLLP-------------SGGNSDMMPYSEDCLKQKSCRIIFQLGVLILELVTGQS----SEMEGSD---LIEWIQESRFYSSIDKMIDPDLGNNYDCTELKSLLAVAKLCIK 828 AW R + +FF ++R S ++++ A+DGF I+ Y R D G L V+ +K G F V+ + HR+LL L+GF + +RLL++ + NGS+ L + P + PLDW TR +IA G L YL +P + H + ++NI+LDE F A + DFGL G + P K +F G+++LEL+TGQ + + D L++W++ ++ ++DPDL NY+ EL+ ++ VA LC + Sbjct: 260 AWWRRRKPLDIFFDVPAEEDPEVHLGQLKRFSLRELQVASDGFSNKNILGRGGFGKVYKGRLAD-GTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT-ERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQTNYEERELEQVIQVALLCTQ 560
BLAST of Vigun05g230600.1 vs. DB:Swiss
Match: ACR4L_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana OX=3702 GN=ACR4 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.377e-24 Identity = 91/296 (30.74%), Postives = 147/296 (49.66%), Query Frame = 1 Query: 79 VRRISYKDVRRATDGFHR--IVYSNSDVSAYAARFEDSGGLCLVREVKGFDE--GSDHFYRHVQFLGXXXXXXXXSLKGFSVGRNRKRLLIFDNIENGSLKDHL---NDPLKTPLDWRTRLQIANGVVAALEYLFLFSEPPVCHVSITSSNIMLDENFTAKLSDFGL--------------LPSG--GNSDMMPYSEDCLKQKSCRIIFQLGVLILELVTGQSS---EMEGSDLIEWIQESRFYSSIDKMIDPDLGNNYDCTELKSLLAVAKLCIKSWDKPSFTIPQLFRHLQRKI 888 R +Y+++ +A DGF IV S Y D + + R + D+ S+ F + L RL H HLLSL G+ +RLL+++ + +GSL +HL N LK LDW R+ IA +EYL ++ PPV H I SSNI++DE A+++DFGL LP+G G D Y L KS ++ GVL+LE+++G+ + E +++EW I+ ++DP L + + LK +++VA C++ K ++ ++ L+R + Sbjct: 497 ARVFTYEELEKAADGFKEESIVGKGSFSCVYKGVLRDGTTVAVKRAIMSSDKQKNSNEFRTELDLLSRLNHAHLLSLLGY-CEECGERLLVYEFMAHGSLHNHLHGKNKALKEQLDWVKRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPVDSGSPLAELPAGTLGYLDPEYYRLHYLTTKS--DVYSFGVLLLEILSGRKAIDMHYEEGNIVEWAVPLIKAGDINALLDPVLKHPSEIEALKRIVSVACKCVRMRGKDRPSMDKVTTALERAL 789
BLAST of Vigun05g230600.1 vs. DB:Swiss
Match: PBL26_ARATH (Probable serine/threonine-protein kinase PBL26 OS=Arabidopsis thaliana OX=3702 GN=PBL26 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.459e-24 Identity = 81/275 (29.45%), Postives = 141/275 (51.27%), Query Frame = 1 Query: 79 VRRISYKDVRRATDGFHR--IVYSNSDVSAYAARFEDSGGLCLVREV-KGFDEGSDHFYRHVQFLGXXXXXXXXSLKGFSVGRNRKRLLIFDNIENGSLKDHLND--PLKTPLDWRTRLQIANGVVAALEYLFLFSEPPVCHVSITSSNIMLDENFTAKLSDFGLLPSGGNSDMMPYSEDCLK---------QKSCRI-----IFQLGVLILELVTGQ-----SSEMEGSDLIEWIQES-RFYSSIDKMIDPDLGNNYDCTELKSLLAVAKLCIK 828 + S++++ AT F + ++ Y + E +G + V+++ + +G+ F V L L H+HL++L G+ + +RLL+++ + GSL+DHL D P + PLDW TR++IA G LEYL + PPV + + ++NI+LD F AKLSDFGL G D S + Q++ ++ ++ GV++LEL+TG+ + + +L+ W Q + S ++ DP L + L +AVA +C++ Sbjct: 64 AQTFSFRELATATKNFRQECLIGEGGFGRVYKGKLEKTGMIVAVKQLDRNGLQGNKEFIVEVLMLSLLHHKHLVNLIGYCADGD-QRLLVYEYMSRGSLEDHLLDLTPDQIPLDWDTRIRIALGAAMGLEYLHDKANPPVIYRDLKAANILLDGEFNAKLSDFGLAKLGPVGDKQHVSSRVMGTYGYCAPEYQRTGQLTTKSDVYSFGVVLLELITGRRVIDTTRPKDEQNLVTWAQPVFKEPSRFPELADPSLEGVFPEKALNQAVAVAAMCLQ 337
BLAST of Vigun05g230600.1 vs. DB:Swiss
Match: LRK64_ARATH (Lectin-domain containing receptor kinase VI.4 OS=Arabidopsis thaliana OX=3702 GN=LECRK64 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.650e-24 Identity = 91/290 (31.38%), Postives = 139/290 (47.93%), Query Frame = 1 Query: 85 RISYKDVRRATDGF--HRIVYSNSDVSAYAARFEDSGGLCLVREVKGFD-EGSDHFYRHVQFLGXXXXXXXXSLKGFSVGRNRKRLLIFDNIENGSLKDHL-NDPLKTP--LDWRTRLQIANGVVAALEYLFLFSEPPVCHVSITSSNIMLDENFTAKLSDFGL-------------LPSGGNSDMMPYSEDCLKQKSCRIIFQLGVLILELVTGQSSEMEGSDLI-EWIQESRFYSSIDKMIDPDLGNNYDCTELKSLLAVAKLCIKSWDKPSFTIPQLFRHLQRKIDI 894 R Y+D+ +AT+GF +R+V + Y S V+++ +G F ++ LGRLRH++L++L+G+ RN LLI+D I NGSL L + P ++ L W R QIA G+ + L YL E V H + SN+++D + +L DFGL + G M P S +F GVL+LE+V+G+ G+ I +W+ E + I IDP LG+ YD E + LAV LC + + + R+L R D+ Sbjct: 350 RFRYRDLYKATEGFKENRVVGTGGFGIVYRGNIRSSSDQIAVKKITPNSMQGVREFVAEIESLGRLRHKNLVNLQGWCKHRN-DLLLIYDYIPNGSLDSLLYSKPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEQIVIHRDVKPSNVLIDSDMNPRLGDFGLARLYERGSQSCTTVVVGTIGYMAPELARNGNSSSASDVFAFGVLLLEIVSGRKPTDSGTFFIADWVMELQASGEILSAIDPRLGSGYDEGEARLALAVGLLCCHHKPESRPLMRMVLRYLNRDEDV 638
BLAST of Vigun05g230600.1 vs. DB:Swiss
Match: LIPG2_ARATH (Receptor-like kinase LIP2 OS=Arabidopsis thaliana OX=3702 GN=LIP2 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.750e-24 Identity = 77/247 (31.17%), Postives = 123/247 (49.80%), Query Frame = 1 Query: 163 YAARFEDSGGLCLVREVKGFD-EGSDHFYRHVQFLGXXXXXXXXSLKGFSVGRNRKRLLIFDNIENGSLKDHLNDPL--KTPLDWRTRLQIANGVVAALEYLFLFSEPPVCHVSITSSNIMLDENFTAKLSDFGL--LPSGGNSDMMPYSEDCLKQKSCRI--------------IFQLGVLILELVTGQ-----SSEMEGSDLIEWIQES-RFYSSIDKMIDPDLGNNYDCTELKSLLAVAKLCIK 828 Y + +G + V+++ G+ F V LG+L H +L+ L G+ ++ RLL++D I GSL+DHL++P P+DW TR+QIA L+YL + PPV + + +SNI+LD++F+ KLSDFGL L G MM S + ++ GV++LEL+TG+ + + +L+ W Q R M DP L N + L +A+A +C++ Sbjct: 79 YKGTLKSTGQVVAVKQLDKHGLHGNKEFQAEVLSLGQLDHPNLVKLIGYCADGDQ-RLLVYDYISGGSLQDHLHEPKADSDPMDWTTRMQIAYAAAQGLDYLHDKANPPVIYRDLKASNILLDDDFSPKLSDFGLHKLGPGTGDKMMALSSRVMGTYGYSAPEYTRGGNLTLKSDVYSFGVVLLELITGRRALDTTRPNDEQNLVSWAQPIFRDPKRYPDMADPVLENKFSERGLNQAVAIASMCVQ 324
BLAST of Vigun05g230600.1 vs. DB:Swiss
Match: PERK9_ARATH (Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana OX=3702 GN=PERK9 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.789e-24 Identity = 94/307 (30.62%), Postives = 150/307 (48.86%), Query Frame = 1 Query: 37 RAWLHRSRSGAVFFVRRI-SYKDVRRATDGFHR--IVYSNSDVSAYAARFEDSGGLCLVREVK-GFDEGSDHFYRHVQFLGXXXXXXXXSLKGFSVGRNRKRLLIFDNIENGSLKDHLNDPLKTPLDWRTRLQIANGVVAALEYLFLFSEPPVCHVSITSSNIMLDENFTAKLSDFGLL-------------PSGGNSDMMPYSEDCLKQKSCRIIFQLGVLILELVTGQ-----SSEMEGSDLIEW----IQESRFYSSIDKMIDPDLGNNYDCTELKSLLAVAKLCIKSWDKPSFTIPQLFRHLQ 879 R+ ++S+SG + + + SY+++ +AT+GF + ++ Y D G + V+++K G +G F V+ L R+ HRHL+S+ G + +R RLLI+D + N L HL+ K+ LDW TR++IA G L YL P + H I SSNI+L++NF A++SDFGL G M P K +F GV++LEL+TG+ S + L+EW I + D + DP LG NY +E+ ++ A C++ + Q+ R + Sbjct: 347 RSGSYQSQSGGLGNSKALFSYEELVKATNGFSQENLLGEGGFGCVYKGILPD-GRVVAVKQLKIGGGQGDREFKAEVETLSRIHHRHLVSIVGHCISGDR-RLLIYDYVSNNDLYFHLHGE-KSVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLEDNFDARVSDFGLARLALDCNTHITTRVIGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDTSQPLGDESLVEWARPLISHAIETEEFDSLADPKLGGNYVESEMFRMIEAAGACVRHLATKRPRMGQIVRAFE 650 The following BLAST results are available for this feature:
BLAST of Vigun05g230600.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun05g230600.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g230600.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g230600.1; organism=Vigna unguiculata; type=mRNA; length=1359bpback to top protein sequence of Vigun05g230600.1_Vu_IT97K-499-35_v1.1 >Vigun05g230600.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g230600.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g230600.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=303bpback to top mRNA from alignment at Vu05:42417556..42420558+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun05g230600.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g230600.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g230600.1; organism=Vigna unguiculata; type=mRNA; length=3003bp; location=Sequence derived from: Vu05:42417556..42420558+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu05:42417556..42420558+ >Vigun05g230600.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g230600.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g230600.1; organism=Vigna unguiculata; type=CDS; length=909bp; location=Sequence derived from: Vu05:42417556..42420558+ (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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