Vigun08g006000.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of Vigun08g006000.1 vs. DB:Swiss
Match: ERG3_ORYSJ (Elicitor-responsive protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=ERG3 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.994e-24 Identity = 52/147 (35.37%), Postives = 87/147 (59.18%), Query Frame = 1 Query: 1 MKRGILEVLVVNAKGIIHTNFVGTPSYYVIIECGTQTRITKVSSGKHEKPRWNEKFIFDLSEFDCKNSTYLKCRIMDTELFRNGGFVGEAKIFIGGIILEGSDQGYIEIQPAPYNVVLQDHTYKGQIKIGFKFIADNNEEYLMEKPD 441 M +G LEVL+V AKG+ +T+++ Y +++C +Q + + V+SGK P WNE F+F ++ N+T L ++MD++ + FVGEA I + I EGS I P YNVV ++ Y+G+IK+G F +++ + + + D Sbjct: 1 MVQGTLEVLLVGAKGLENTDYLCNMDPYAVLKCRSQEQKSSVASGKGSDPEWNETFMFSVT----HNATELIIKLMDSDSGTDDDFVGEATISLEAIYTEGS------IPPTVYNVV-KEEEYRGEIKVGLTFTPEDDRDRGLSEED 136
BLAST of Vigun08g006000.1 vs. DB:Swiss
Match: ERG3_ORYSI (Elicitor-responsive protein 3 OS=Oryza sativa subsp. indica OX=39946 GN=ERG3 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.994e-24 Identity = 52/147 (35.37%), Postives = 87/147 (59.18%), Query Frame = 1 Query: 1 MKRGILEVLVVNAKGIIHTNFVGTPSYYVIIECGTQTRITKVSSGKHEKPRWNEKFIFDLSEFDCKNSTYLKCRIMDTELFRNGGFVGEAKIFIGGIILEGSDQGYIEIQPAPYNVVLQDHTYKGQIKIGFKFIADNNEEYLMEKPD 441 M +G LEVL+V AKG+ +T+++ Y +++C +Q + + V+SGK P WNE F+F ++ N+T L ++MD++ + FVGEA I + I EGS I P YNVV ++ Y+G+IK+G F +++ + + + D Sbjct: 1 MVQGTLEVLLVGAKGLENTDYLCNMDPYAVLKCRSQEQKSSVASGKGSDPEWNETFMFSVT----HNATELIIKLMDSDSGTDDDFVGEATISLEAIYTEGS------IPPTVYNVV-KEEEYRGEIKVGLTFTPEDDRDRGLSEED 136
BLAST of Vigun08g006000.1 vs. DB:Swiss
Match: Y1322_ARATH (C2 domain-containing protein At1g63220 OS=Arabidopsis thaliana OX=3702 GN=At1g63220 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.995e-22 Identity = 55/157 (35.03%), Postives = 83/157 (52.87%), Query Frame = 1 Query: 1 MKRGILEVLVVNAKGIIHTNFVGTPSYYVIIECGTQTRITKVSSGKHEKPRWNEKFIFDLSEFDCKNSTYLKCRIMDTELFRNGGFVGEAKIFIGGIILEGSDQGYIEIQPAPYNVVLQDHTYKGQIKIGFKFIADNNEEYLMEKPDEFKGYEKKES 471 M G LEV++V+AKG+ +F+ YV + C TQ + + V+ G P WNE FIF +SE +T LK +I D ++ VGEA I + + +EGS I P YNVV +D YKG+I + F N M++ + + G++ E+ Sbjct: 1 MPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSE----GTTELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGS------IPPTAYNVV-KDEEYKGEIWVALSFKPSENRSRGMDE-ESYGGWKNSEA 145
BLAST of Vigun08g006000.1 vs. DB:Swiss
Match: ERG1_ORYSJ (Elicitor-responsive protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ERG1 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.018e-20 Identity = 45/135 (33.33%), Postives = 73/135 (54.07%), Query Frame = 1 Query: 10 GILEVLVVNAKGIIHTNF---VGTPSYYVIIECGTQTRITKVSSGKHEKPRWNEKFIFDLSEFDCKNSTYLKCRIMDTELFRNGGFVGEAKIFIGGIILEGSDQGYIEIQPAPYNVVLQDHTYKGQIKIGFKFIA 405 G+LEV +V+AKG+ +F +G YV+++ +Q R + V+ + + P WNE F F ++ L R+MD + F F+GEA I + +I G + G E+ + + VVL D TY G+I++ F A Sbjct: 5 GVLEVHLVDAKGLTGNDFLGEIGKIDPYVVVQYRSQERKSSVARDQGKNPSWNEVFKFQINSTAATGQHKLFLRLMDHDTFSRDDFLGEATINVTDLISLGMEHGTWEMSESKHRVVLADKTYHGEIRVSLTFTA 139
BLAST of Vigun08g006000.1 vs. DB:Swiss
Match: ERG1_ORYSI (Elicitor-responsive protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=ERG1 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 3.018e-20 Identity = 45/135 (33.33%), Postives = 73/135 (54.07%), Query Frame = 1 Query: 10 GILEVLVVNAKGIIHTNF---VGTPSYYVIIECGTQTRITKVSSGKHEKPRWNEKFIFDLSEFDCKNSTYLKCRIMDTELFRNGGFVGEAKIFIGGIILEGSDQGYIEIQPAPYNVVLQDHTYKGQIKIGFKFIA 405 G+LEV +V+AKG+ +F +G YV+++ +Q R + V+ + + P WNE F F ++ L R+MD + F F+GEA I + +I G + G E+ + + VVL D TY G+I++ F A Sbjct: 5 GVLEVHLVDAKGLTGNDFLGEIGKIDPYVVVQYRSQERKSSVARDQGKNPSWNEVFKFQINSTAATGQHKLFLRLMDHDTFSRDDFLGEATINVTDLISLGMEHGTWEMSESKHRVVLADKTYHGEIRVSLTFTA 139
BLAST of Vigun08g006000.1 vs. DB:Swiss
Match: PP16B_CUCMA (16 kDa phloem protein 2 OS=Cucurbita maxima OX=3661 GN=PP16-2 PE=1 SV=3) HSP 1 Score: 65.4698 bits (158), Expect = 1.045e-12 Identity = 37/134 (27.61%), Postives = 68/134 (50.75%), Query Frame = 1 Query: 1 MKRGILEVLVVNAKGIIHTNFVGTP-SYYVIIECGTQTRITKVSSGKHEKPRWNEKFIFDLSEFDCKNSTYLKCRIMDTELFRNGGFVGEAKIFIGGIILEGSDQGYIEIQPAPYNVVLQDHTYKGQIKIGFKF 399 M G++EV +++ KG+ + + P Y I Q R++KV+ P WNEKF F + ++ ++MD + ++G+ KI + ++ EG +G+ E+ P Y V+ +KG+I++G F Sbjct: 1 MGMGMMEVHLISGKGLQAHDPLNKPIDPYAEINFKGQERMSKVAKNAGPDPIWNEKFKFLVEYPGSGGDFHILFKVMDHDAIDGDDYIGDVKIDVQNLLAEGVRKGWSELPPRMYQVLAHKIYFKGEIEVGVFF 134
BLAST of Vigun08g006000.1 vs. DB:Swiss
Match: PP16A_CUCMA (16 kDa phloem protein 1 OS=Cucurbita maxima OX=3661 GN=PP16-1 PE=1 SV=3) HSP 1 Score: 64.6994 bits (156), Expect = 1.928e-12 Identity = 38/135 (28.15%), Postives = 71/135 (52.59%), Query Frame = 1 Query: 1 MKRGILEVLVVNAKGIIHTNFVGTP-SYYVIIECGTQTRITKVSSGKHEKPRWNEKFIFDLSEFDCKNSTY-LKCRIMDTELFRNGGFVGEAKIFIGGIILEGSDQGYIEIQPAPYNVVLQDHTYKGQIKIGFKF 399 M G++EV +++ KG+ + + P Y I Q R++KV+ P W+EKF F L+E+ + + ++MD + ++G+ KI + ++ EG +G E+ P Y+V+ +KG+I++G F Sbjct: 1 MGMGMMEVHLISGKGLQAHDPLNKPIDPYAEINFKGQERMSKVAKNAGPNPLWDEKFKF-LAEYPGSGGDFHILFKVMDHDAIDGDDYIGDVKIDVKNLLAEGVRKGKSEMPPRMYHVLAHKIHFKGEIEVGVSF 134 The following BLAST results are available for this feature:
BLAST of Vigun08g006000.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 7
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun08g006000.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g006000.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g006000.1; organism=Vigna unguiculata; type=mRNA; length=534bpback to top protein sequence of Vigun08g006000.1_Vu_IT97K-499-35_v1.1 >Vigun08g006000.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g006000.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g006000.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=178bpback to top mRNA from alignment at Vu08:523659..524806+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun08g006000.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g006000.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g006000.1; organism=Vigna unguiculata; type=mRNA; length=1148bp; location=Sequence derived from: Vu08:523659..524806+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu08:523659..524806+ >Vigun08g006000.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g006000.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g006000.1; organism=Vigna unguiculata; type=CDS; length=534bp; location=Sequence derived from: Vu08:523659..524806+ (Vigna unguiculataback to top |