Vigun10g119600.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of Vigun10g119600.1 vs. DB:Swiss
Match: XTH31_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 31 OS=Arabidopsis thaliana OX=3702 GN=XTH31 PE=1 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 1.094e-20 Identity = 67/186 (36.02%), Postives = 92/186 (49.46%), Query Frame = 1 Query: 94 SDTITLTYDIRGGARWRTPTRFHSGTFSALIQCPGGDTNGLNFNLYLSS-LEGDKSQDEIDFEFLGR---DRTLVQTNFFCGGAGDNERIHH-----LGFDASEGFHEYAIAWGSDAIEWRVDXXXXXXXXXXXXXAFPEKAMFLYASIWDASGIAEGKWCGKYSGADEPYVCVYKNIHVPVGTVD 624 D +TL D G+ +++ + SG F A I+ G T G++ +LYLS+ E DE+D EFLG +QTN F G+GD I L FD ++ FH YAI W + I + VD +R RK FP + M++Y SIWDAS A K +P+V YKN + T D Sbjct: 56 QDVVTLWLDKSTGSGFKSLRPYRSGYFGASIKLQPGFTAGVDTSLYLSNNQEHPGDHDEVDIEFLGTTPGKPYSLQTNVFVRGSGDRNVIGREMKFTLWFDPTQDFHHYAILWNPNQIVFFVDDVPIRTYNRKNEAIFPTRPMWVYGSIWDASDWATENGRIKADYRYQPFVAKYKNFKLAGCTAD 241
BLAST of Vigun10g119600.1 vs. DB:Swiss
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum OX=4097 GN=XTH PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.984e-20 Identity = 65/194 (33.51%), Postives = 99/194 (51.03%), Query Frame = 1 Query: 58 DYTPEACSH----CAISDTITLTYDIRGGARWRTPTRFHSGTFSALIQCPGGDTNGLNFNLYLSSLEGDKSQDEIDFEFLGRDRT----LVQTNFFCGGAGDNERIHHLGFDASEGFHEYAIAWGSDAIEWRVDXXXXXXXXXXXX--XAFP-EKAMFLYASIWDASGIAEGKWCGKYSGADEPYVCVYKNIHV 606 +Y P SH + T+ L D GA +++ + G FS ++ GGD+ G+ YLSS + DEIDFEFLG +RT ++QTN F GG GD E+ +L FD ++G+H Y++ W + I VD +R + + FP + M +Y+S+WDA A K ++ P+ Y + HV Sbjct: 35 NYEPSWASHHIKYLSGGSTVDLVLDRSSGAGFQSKKSYLFGHFSMKLKLVGGDSAGVVTAFYLSS--NNAEHDEIDFEFLG-NRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKGYHSYSVLWNTFQIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTDWSNAPFTASYTSFHV 225
BLAST of Vigun10g119600.1 vs. DB:Swiss
Match: XTH4_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana OX=3702 GN=XTH4 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.365e-20 Identity = 63/175 (36.00%), Postives = 92/175 (52.57%), Query Frame = 1 Query: 103 ITLTYDIRGGARWRTPTRFHSGTFSALIQCPGGDTNGLNFNLYLSSLEGDKSQDEIDFEFLGRDRT----LVQTNFFCGGAGDNERIHHLGFDASEGFHEYAIAWGSDAIEWRVDXXXXXXXXXXXXXA--FP-EKAMFLYASIWDASGIAEGKWCGKYSGADEPYVCVYKNIHV 606 + L D G +++ + G FS I+ P GDT G+ YLSS + DEIDFEFLG +RT ++QTN F GG G+ E+ +L FD S+ +H Y+I W I + VD +R + + FP + M LY+S+W+A A K + A+ P+V YK H+ Sbjct: 57 LQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSSTNNE--HDEIDFEFLG-NRTGQPAILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSILWNMYQIVFFVDNIPIRTFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFVASYKGFHI 228
BLAST of Vigun10g119600.1 vs. DB:Swiss
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis OX=3715 GN=XET16A PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 3.166e-19 Identity = 60/175 (34.29%), Postives = 92/175 (52.57%), Query Frame = 1 Query: 103 ITLTYDIRGGARWRTPTRFHSGTFSALIQCPGGDTNGLNFNLYLSSLEGDKSQDEIDFEFLGRDRT----LVQTNFFCGGAGDNERIHHLGFDASEGFHEYAIAWGSDAIEWRVDXXXXXXXXXXXXXA--FP-EKAMFLYASIWDASGIAEGKWCGKYSGADEPYVCVYKNIHV 606 + L D G +++ + G FS I+ P GDT G+ YLSS + DEIDFEFLG +RT ++QTN F GG G+ E+ +L FD S+ +H Y++ W I + VD +R + + FP + M LY+S+W+A A K + A+ P++ Y+ H+ Sbjct: 56 LQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSSTNNE--HDEIDFEFLG-NRTGQPVILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSVLWNLYQIVFFVDNIPIRVFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFIASYRGFHI 227
BLAST of Vigun10g119600.1 vs. DB:Swiss
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum OX=4081 GN=XTH1 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 3.309e-19 Identity = 65/194 (33.51%), Postives = 98/194 (50.52%), Query Frame = 1 Query: 58 DYTPEACSH----CAISDTITLTYDIRGGARWRTPTRFHSGTFSALIQCPGGDTNGLNFNLYLSSLEGDKSQDEIDFEFLGRDRT----LVQTNFFCGGAGDNERIHHLGFDASEGFHEYAIAWGSDAIEWRVDXXXXXXXXXXXX--XAFP-EKAMFLYASIWDASGIAEGKWCGKYSGADEPYVCVYKNIHV 606 +Y P SH T L D GA +++ + G FS ++ GGD+ G+ YLSS + DEIDFEFLG +RT ++QTN F GG G+ E+ +L FD ++G+H Y++ W + I VD +R + + FP + M +Y+S+WDA A K + A+ P+ Y + HV Sbjct: 36 NYEPSWASHHIKFLNGGTTTDLILDRSSGAGFQSKKSYLFGHFSMKMRLVGGDSAGVVTAFYLSS--NNAEHDEIDFEFLG-NRTGQPYILQTNVFTGGKGNREQRIYLWFDPTKGYHSYSVLWNTYLIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTNWANAPFTASYTSFHV 226
BLAST of Vigun10g119600.1 vs. DB:Swiss
Match: XTH32_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 32 OS=Arabidopsis thaliana OX=3702 GN=XTH32 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.467e-18 Identity = 66/180 (36.67%), Postives = 93/180 (51.67%), Query Frame = 1 Query: 97 DTITLTYDIRGGARWRTPTRFHSGTFSALIQCPGGDTNGLNFNLYLSSLEGDKS-QDEIDFEFLG----RDRTLVQTNFFCGGAGDNERI-----HHLGFDASEGFHEYAIAWGSDAIEWRVDXXXXXXXXXXXXXAFPEKAMFLYASIWDASGIA--EGKWCGKYSGADEPYVCVYKNI 600 + +T+ D G+ +++ F SG F A I+ G T G+ +LYLS+ E DE+D EFLG + TL QTN + G+GD + I L FD ++ FH YAI W I + VD +RR +K FP + M+LY SIWDAS A +GK+ Y +P+ Y N Sbjct: 61 NALTIWLDRTSGSGFKSVKPFRSGYFGANIKLQPGYTAGVITSLYLSNNEAHPGFHDEVDIEFLGTTFGKPYTL-QTNVYIRGSGDGKIIGREMKFRLWFDPTKDFHHYAILWSPREIIFLVDDIPIRRYPKKSASTFPLRPMWLYGSIWDASSWATEDGKYKADYK--YQPFTAKYTNF 237
BLAST of Vigun10g119600.1 vs. DB:Swiss
Match: XTH33_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana OX=3702 GN=XTH33 PE=2 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 5.500e-18 Identity = 61/183 (33.33%), Postives = 90/183 (49.18%), Query Frame = 1 Query: 109 LTYDIRGGARWRTPTRFHSGTFSALIQCPGGDTNGLNFNLYLSSLEG-DKSQDEIDFEFLGRDRT---LVQTNFFCGGAGDN--ERIHHLGFDASEGFHEYAIAWGSDAIEWRVDXXXXXX--XXXXXXXAFPEKAMFLYASIWDASGIAE--GKWCGKYSGADEPYVCVYKNIHVPVGTVDD 627 LT D GA + ++H G FSA ++ P G +G+ YLS+ E KS DEID E LGR R +QTN + G+ E + FD ++ FH+Y + W S + VD VR+ A+P K M LY ++WD S A GK+ Y A P+V ++ + +V++ Sbjct: 65 LTLDKSSGAGLVSKNKYHYGFFSARLKLPAGFASGVVVAFYLSNAETYPKSHDEIDIELLGRSRRDDWTIQTNVYANGSTRTGREEKFYFWFDPTQAFHDYTLIWNSHHTVFLVDNIPVRQFPNRGAFTSAYPSKPMSLYVTVWDGSEWATKGGKYPVNYKYA--PFVVSVADVELSGCSVNN 245
BLAST of Vigun10g119600.1 vs. DB:Swiss
Match: GUB_BACSU (Beta-glucanase OS=Bacillus subtilis (strain 168) OX=224308 GN=bglS PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 8.530e-18 Identity = 43/106 (40.57%), Postives = 63/106 (59.43%), Query Frame = 1 Query: 262 DEIDFEFLGRDRTLVQTNFFCGGAGDNERIHHLGFDASEGFHEYAIAWGSDAIEWRVDXXXXXXXXXXXXXAFPEKAMFLYASIWDASGIAEGKWCGKYSGADEPY 579 DEID EFLG+D T VQ N++ GAG++E+I LGFDA+ +H YA W ++I+W VDG + + P K M ++W+ +G+ E W G Y+G + Y Sbjct: 132 DEIDIEFLGKDTTKVQFNYYTNGAGNHEKIVDLGFDAANAYHTYAFDWQPNSIKWYVDGQLKHTATNQIPTT-PGKIMM---NLWNGTGVDE--WLGSYNGVNPLY 231
BLAST of Vigun10g119600.1 vs. DB:Swiss
Match: XTH27_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 27 OS=Arabidopsis thaliana OX=3702 GN=XTH27 PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.169e-17 Identity = 65/178 (36.52%), Postives = 94/178 (52.81%), Query Frame = 1 Query: 100 TITLTYDIRGGARWRTPTRFHSGTFSALIQCPGGDTNGLNFNLYLSSLEG-DKSQDEIDFEFLGRDRT---LVQTNFFCGGA---GDNERIHHLGFDASEGFHEYAIAWGSDAIEWRVDXXXXXXXXXXXXXA--FPEKAMFLYASIWDASGIAE--GKWCGKYSGADEPYVCVYKNI 600 ++ LT D R G+ + + + G FSA I+ P T G+ Y+S+ + +K+ DEIDFEFLG R VQTN + G+ G ER ++L FD +E FH+Y+I W I + VD +R +R FP K M LY +IWD S A GK+ Y A PY+ + ++ Sbjct: 52 SVRLTLDERTGSGFVSNDYYLHGFFSASIKLPSDYTAGVVVAFYMSNGDMYEKNHDEIDFEFLGNIREKEWRVQTNIYGNGSTHSGREER-YNLWFDPTEDFHQYSILWSDSHIIFFVDNVPIREVKRTAEMGGHFPSKPMSLYTTIWDGSKWATNGGKYGVNYKYA--PYIARFSDL 226
BLAST of Vigun10g119600.1 vs. DB:Swiss
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum OX=4565 GN=XTH PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.533e-17 Identity = 60/175 (34.29%), Postives = 91/175 (52.00%), Query Frame = 1 Query: 103 ITLTYDIRGGARWRTPTRFHSGTFSALIQCPGGDTNGLNFNLYLSSLEGDKSQDEIDFEFLGRDRT----LVQTNFFCGGAGDNERIHHLGFDASEGFHEYAIAWGSDAIEWRVDXXXXXXXXXXXXXA--FP-EKAMFLYASIWDASGIAEGKWCGKYSGADEPYVCVYKNIHV 606 + L+ D G ++T + G FS I+ GGD+ G YLSS + DEIDFEFLG +RT ++QTN F GG GD E+ +L FD ++ +H Y++ W I + VD +R + + +P ++ M LY+S+W+A A K + P+V Y+ HV Sbjct: 54 VQLSLDKTTGTGFQTRGSYLFGHFSMHIKLVGGDSAGTVTAFYLSSQNSE--HDEIDFEFLG-NRTGQPYILQTNVFSGGKGDREQRIYLWFDPTKDYHSYSVLWNLYMIAFFVDDTPIRVFKNSKDLGVRYPFDQPMKLYSSLWNADDWATRGGREKTDWSKAPFVASYRGFHV 225 The following BLAST results are available for this feature:
BLAST of Vigun10g119600.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun10g119600.1_Vu_IT97K-499-35_v1.1 ID=Vigun10g119600.1_Vu_IT97K-499-35_v1.1; Name=Vigun10g119600.1; organism=Vigna unguiculata; type=mRNA; length=633bpback to top protein sequence of Vigun10g119600.1_Vu_IT97K-499-35_v1.1 >Vigun10g119600.1_Vu_IT97K-499-35_v1.1 ID=Vigun10g119600.1_Vu_IT97K-499-35_v1.1; Name=Vigun10g119600.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=211bpback to top mRNA from alignment at Vu10:32607876..32608508- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun10g119600.1_Vu_IT97K-499-35_v1.1 ID=Vigun10g119600.1_Vu_IT97K-499-35_v1.1; Name=Vigun10g119600.1; organism=Vigna unguiculata; type=mRNA; length=633bp; location=Sequence derived from: Vu10:32607876..32608508- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu10:32607876..32608508- >Vigun10g119600.1_Vu_IT97K-499-35_v1.1 ID=Vigun10g119600.1_Vu_IT97K-499-35_v1.1; Name=Vigun10g119600.1; organism=Vigna unguiculata; type=CDS; length=633bp; location=Sequence derived from: Vu10:32607876..32608508- (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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