Phvul.003G244800.1

Transcript Overview
NamePhvul.003G244800.1
Unique NamePhvul.003G244800.1_Pv_G19833_v2.1
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr03supercontigChr03:48132741..48135170 +Phaseolus vulgaris G19833 genome v2.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Phaseolus vulgaris G19833 genome v2.12019-09-17
InterProScan: Phaseolus vulgaris G19833 genome v2.12019-10-18
BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot2019-10-18
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pvpvL128Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvpvR191Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvpvR224Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuR311Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR339Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR352Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
crpvL039Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crpvL266Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
caipvL0821Cicer arietinum ICC 4958 genome v2Cicer arietinum
caipvL1043Cicer arietinum ICC 4958 genome v2Cicer arietinum
capvL343Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
crpvL731Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL449Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL605Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL711Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL787Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccpvL0034Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL0669Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL1186Cajanus cajan Asha genome v1.0Cajanus cajan
pvzwsR305Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR317Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR385Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvvfhR329Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR392Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR416Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvtifR327Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR358Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR393Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR418Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvrvR286Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR347Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR368Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvuaR277Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR283Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR294Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR409Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR416Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR432Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR467Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpvL422Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL586Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL681Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL758Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpvL284Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL289Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL591Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL729Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpvL440Cicer arietinum
carpvL587Cicer arietinum
carpvL689Cicer arietinum
carpvL781Cicer arietinum
ccapvL052Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL190Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL609Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumR359Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR369Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR406Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR430Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvvaR338Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR391Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR442Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvasR367Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR377Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR362Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvasR405Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR370Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvasR430Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR396Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR418Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvpvfR283Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR305Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR327Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR364Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvvunR285Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR312Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR324Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Cc_v2.0_26463.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vum_01G02588.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-XM_014650993.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
evm.model.Chr03.2589Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigun03g276200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigan.01G345300.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigst.01G236200.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Cr_06185.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vigun03g276200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Va01G074630.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-KK1_036443Cajanus cajan Asha genome v1.0Cajanus cajan

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr03.1475Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Phvul.003G244800Phvul.003G244800_Pv_G19833_v2.1Phaseolus vulgarisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Phvul.003G244800.1Phvul.003G244800.1_Pv_G19833_v2.1-proteinPhaseolus vulgarispolypeptide
Phvul.003G244800.1_Pv_G19833_v2.1Phvul.003G244800.1_Pv_G19833_v2.1Phaseolus vulgarispolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.003G244800.1.v2.1.five_prime_UTR.1Phvul.003G244800.1.v2.1.five_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.003G244800.1.v2.1.CDS.1Phvul.003G244800.1.v2.1.CDS.1_Pv_G19833_v2.1Phaseolus vulgarisCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.003G244800.1.v2.1.three_prime_UTR.1Phvul.003G244800.1.v2.1.three_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgaristhree_prime_UTR
Phvul.003G244800.1.v2.1.three_prime_UTR.2Phvul.003G244800.1.v2.1.three_prime_UTR.2_Pv_G19833_v2.1Phaseolus vulgaristhree_prime_UTR


Homology
BLAST of Phvul.003G244800.1 vs. DB:Swiss
Match: PP405_ARATH (Pentatricopeptide repeat-containing protein At5g39350 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E16 PE=2 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 5.342e-105
Identity = 219/659 (33.23%), Postives = 339/659 (51.44%), Query Frame = 1
Query:   22 FNSLL---GACKTLNQAKQLHNCILQTASHRNPFFVTKLIQIYADCNDLRSALTLLHQLSQPNVFAFTSILSFHSKHGHPHHCIQTYAKLRQNGV--VPDGYVFPKVLKACAQLSRLGTGTVVYKDVIVFGAESNLQVRNSVLDMYSKCGDVWSATQVFDEMPERDVFSWNSMMSGYVCNGFPQRAVEVFRVMKGNGCE---------------------------------CAPDVVTWNTLMDAYCRMGKCCEAWRVFGEIEIPNVISWTILISGYASVGRHHVSLGIFREMVNVGMVSPDVDALSGVLVSCRALGALASGMEIHGYGLK-IMYGDVFYRSXXXXXXXXXXXXXRLDRADVVFRRMDKSDVVTWNAMIFXXXXXXXXXXALECFREMQERGLRIDGTTVATILP----VCDLRCGKEMHAYVRKCCLSSVIPVNNALVHMYSIRGCIAYACAVFSTM----VAKDLVSWNTIIGGFGTHGLGQIALKLLQEMSDSGVRPDLVTFSCVLSACSHSGLVDEGIKLFYRMTKDLGLTPVREHFSCVVDMLARAGRLEEAFDFINQMPQEPDKHVWGALLAACQEHQNVSVGKVAAEKLISLEPQEAGHYVTLSNIYSRAGRWDDAARVRRMMKGHALLKPSGHSLVGIGS 1857
            + SLL    A +++++ K LH C + T    +   ++ L   YA C  +  A  L  ++ Q ++ ++  ++  + + G  H  I  + ++   GV  VPDGY +P V KA  +L  +  G VV+  ++      +  V+N++L MY   G V  A  VFD M  RDV SWN+M+SGY  NG+   A+ +F  M     +                                     +   N L++ Y + G+  EA  VF  +E  +VI+WT +I+GY   G    +L + R M   G V P+   ++ ++  C     +  G  +HG+ ++  +Y D+   +   +L+++YA C R+D    VF    K     W+A+I G V   L   AL  F+ M+   +  +  T+ ++LP    + DLR    +H Y+ K    S +     LVH+YS  G +  A  +F+ +     +KD+V W  +I G+G HG G  AL++  EM  SGV P+ +TF+  L+ACSHSGLV+EG+ LF  M +         H++C+VD+L RAGRL+EA++ I  +P EP   VWGALLAAC  H+NV +G++AA KL  LEP+  G+YV L+NIY+  GRW D  +VR MM+   L K  GHS + I S
Sbjct:   18 YQSLLNHFAATQSISKTKALH-CHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEG-VRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIET---SLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIRS 671          
BLAST of Phvul.003G244800.1 vs. DB:Swiss
Match: PP350_ARATH (Pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H27 PE=3 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 9.688e-104
Identity = 199/614 (32.41%), Postives = 333/614 (54.23%), Query Frame = 1
Query:  118 VTKLIQIYADCNDLRSALTLLHQLSQPNVFAFTSILSFHSKHGHPHHCIQTYAKLRQNGVVPDGYVFPKVLKACAQLSRLGTGTVVYKDVIVFGAESNLQVRNSVLDMYSKCGDVWSATQVFDEMPERDVFSWNSMMSGYVCNGFPQRAVEVFRVM--------------------------KGNGCEC--------APDVVTWNTLMDAYCRMGKCCEAWRVFGEIEIPNVISWTILISGYASVGRHHVSLGIFREMVNVGMVSPDVDALSGVLVSCRALGALASGMEIHGYGLKIMYGDVFYRSXXXXXXXXXXXXXRLDRADVVFRRMDKSDVVTWNAMIFXXXXXXXXXXALECFREMQERGLRIDGTTVATILPV----CDLRCGKEMHAYVRKCCLSSVIPVNNALVHMYSIRGCIAYACAVFSTMVAKDLVSWNTIIGGFGTHGLGQIALKLLQEMSDSGVRPDLVTFSCVLSACSHSGLVDEGIKLFYRMTKDLGLTPVREHFSCVVDMLARAGRLEEAFDFINQMPQEPDKHVWGALLAACQEHQNVSVGKVAAEKLISLEPQEAGHYVTLSNIYSRAGRWDDAARVRRMMKGHALLKPSGHSLV 1845
            +T+ ++ +AD   +  AL L  ++++ + F +  ++   +  G     +Q Y+++   GV  D + +P V+K+ A +S L  G  ++  VI  G  S++ V NS++ +Y K G  W A +VF+EMPERD+ SWNSM+SGY+  G    ++ +F+ M                           G    C          DV+   +++D Y + G+   A R+F  +   N+++W ++I  YA  GR   +   F++M     + PDV     +L +     A+  G  IHGY ++   G + +     AL+ +Y  CG+L  A+V+F RM + +V++WN++I   V  G    ALE F+E+ +  L  D TT+A+ILP       L  G+E+HAY+ K    S   + N+LVHMY++ G +  A   F+ ++ KD+VSWN+II  +  HG G+I++ L  EM  S V P+  TF+ +L+ACS SG+VDEG + F  M ++ G+ P  EH+ C++D++ R G    A  F+ +MP  P   +WG+LL A + H+++++ + AAE++  +E    G YV L N+Y+ AGRW+D  R++ +M+   + + S  S V
Sbjct:   67 LTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMR--RGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTV 674          

HSP 2 Score: 98.2117 bits (243), Expect = 6.492e-20
Identity = 58/220 (26.36%), Postives = 113/220 (51.36%), Query Frame = 1
Query:   28 SLLGACKTLNQAKQLHNCILQTASHRNPFFVTKLIQIYADCNDLRSALTLLHQLSQPNVFAFTSILSFHSKHGHPHHCIQTYAKLRQNGVVPDGYVFPKVLKACAQLSRLGTGTVVYKDVIVFGAESNLQVRNSVLDMYSKCGDVWSATQVFDEMPERDVFSWNSMMSGYVCNGFPQRAVEVFRVMKGNGCECAPDVVTWNTLMDAYCRMGKCCEAWRVF 687
            +LL A   L + + +H   ++     +    T LI +Y +C  L+SA  +  ++++ NV ++ SI++ + ++G  +  ++ + +L  + +VPD      +L A A+   L  G  ++  ++     SN  + NS++ MY+ CGD+  A + F+ +  +DV SWNS++  Y  +GF + +V +F  M  +     P+  T+ +L+ A    G   E W  F
Sbjct:  339 NLLPASAIL-EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIAS--RVNPNKSTFASLLAACSISGMVDEGWEYF 555          

HSP 3 Score: 57.7658 bits (138), Expect = 2.425e-7
Identity = 31/150 (20.67%), Postives = 75/150 (50.00%), Query Frame = 1
Query:   49 TLNQAKQLHNCILQTASHRNPFFVTKLIQIYADCNDLRSALTLLHQLSQPNVFAFTSILSFHSKHGHPHHCIQTYAKLRQNGVVPDGYVFPKVLKACAQLSRLGTGTVVYKDVI-VFGAESNLQVRNSVLDMYSKCGDVWSATQVFDEMP 495
            +L++ +++H  I+++    N   +  L+ +YA C DL  A    + +   +V ++ SI+  ++ HG     +  ++++  + V P+   F  +L AC+    +  G   ++ +   +G +  ++    +LD+  + G+  +A +  +EMP
Sbjct:  446 SLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMP 595          
BLAST of Phvul.003G244800.1 vs. DB:Swiss
Match: PP280_ARATH (Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E86 PE=2 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 2.614e-103
Identity = 205/650 (31.54%), Postives = 345/650 (53.08%), Query Frame = 1
Query:   28 SLLGAC---KTLNQAKQLHNCILQTASHRNPFFVTKLIQIYADCNDLRSALTLLHQLSQPNVFAFTSILSFHSKHGHPHHCIQTYAKLRQNGVVPDGYVFPKVLKACAQLSRLGTGTVVYKDVIVFGAESNLQVRNSVLDMYSKCGDVWSATQVFDEMPERDVFSWNSMMSGYVCNGFPQRAVEVFRVMKGNG----------------------------------CECAPDVVTWNTLMDAYCRMGKCCEAWRVFGEIEIPNVISWTILISGYASVGRHHVSLGIFREMVNVGMVSPDVDALSGVLVSCRALGALASGMEIHGYGLKIMYGDVFYRSXXXXXXXXXXXXXRLDRADVVFRRM-DKSDVVTWNAMIFXXXXXXXXXXALECFREMQERGLRIDGTTVATILPVC----DLRCGKEMHAYVRKCCLSSVIPVNNALVHMYSIRGCIAYACAVFSTMVAKDLVSWNTIIGGFGTHGLGQIALKLLQEMSDSGVRPDLVTFSCVLSACSHSGLVDEGIKLFYRMTKDLGLTPVREHFSCVVDMLARAGRLEEAFDFINQMPQEPDKHVWGALLAACQEHQNVSVGKVAAEKLISLEPQEAGHYVTLSNIYSRAGRWDDAARVRRMMKGHALLKPSGHSLVGI 1851
            SL+ AC   ++L Q +++H+ IL +    +      ++ +Y  C  LR A  +   + + N+ ++TS+++ +S++G     I+ Y K+ Q  +VPD + F  ++KACA  S +G G  ++  VI   + S+L  +N+++ MY +   +  A++VF  +P +D+ SW+S+++G+   GF   A+   + M   G                                   E A + +   +L D Y R G    A RVF +IE P+  SW ++I+G A+ G    ++ +F +M + G + PD  +L  +L +     AL+ GM+IH Y +K  +G +   +   +LL +Y  C  L     +F    + +D V+WN ++   +        L  F+ M       D  T+  +L  C     L+ G ++H Y  K  L+    + N L+ MY+  G +  A  +F +M  +D+VSW+T+I G+   G G+ AL L +EM  +G+ P+ VTF  VL+ACSH GLV+EG+KL+  M  + G++P +EH SCVVD+LARAGRL EA  FI++M  EPD  VW  LL+AC+   NV + + AAE ++ ++P  +  +V L ++++ +G W++AA +R  MK H + K  G S + I
Sbjct:   72 SLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFI-PDAISLRSLLCAQTKPMALSQGMQIHSYIIK--WGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEI 718          

HSP 2 Score: 57.3806 bits (137), Expect = 3.598e-7
Identity = 61/280 (21.79%), Postives = 121/280 (43.21%), Query Frame = 1
Query: 1078 ALECFREMQERG-LRIDGTTVATILPVCD----LRCGKEMHAYVRKCCLSSVIPVNNALVHMYSIRGCIAYACAVFSTMVAKDLVSWNTIIGGFGTHGLGQIALKLLQEMSDSGVRPDLVTFSCVLSACSHSGLVDEGIKLFYRMTKDLGLT----------------------------PVRE--HFSCVVDMLARAGRLEEAFDFINQMPQ----EPDKHVWGALLAACQEHQNVSVGKVAAEKLISLEPQEAGHYV---TLSNIYSRAGRWDDAARV 1791
            ALE F   Q+    +I   T  +++  C     L  G+++H ++          +NN ++ MY   G +  A  VF  M  ++LVS+ ++I G+  +G G  A++L  +M    + PD   F  ++ AC+ S  V  G +L  ++ K    +                            P+++   +S ++   ++ G   EA   + +M       P+++++G+ L AC        G  +    + ++ + AG+ +   +L ++Y+R G  + A RV
Sbjct:   50 ALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYG--SQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRV 327          
BLAST of Phvul.003G244800.1 vs. DB:Swiss
Match: PP320_ARATH (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 1.654e-101
Identity = 210/641 (32.76%), Postives = 324/641 (50.55%), Query Frame = 1
Query:   46 KTLNQAKQLHNCILQTASHRNPFFVTKLIQIYADCNDLRSALTLLHQLSQPNVFAFTSILSFHSKHGHPHHCIQTYAKLRQNGVVPDGYVFPKVLKACAQLSRLGTGTVVYKDVIVFGAESNLQVRNSVLDMYSKCGDVWSATQVFDEMPERDVFSWNSMMSGYVCNGFPQRAVEVFRVMKGNGCE------------CAPDVVTW---------------------NTLMDAYCRMGKCCEAWRVFGEIEIPNVISWTILISGYASVGRHHVSLGIFREMVNVGMVSPDVDALSGVLVSCRALGALASGMEIHGYGLKIMYG-DVFYRSXXXXXXXXXXXXXRLDRADVVFRRMDKSDVVTWNAMIFXXXXXXXXXXALECFREM-QERGLRIDGTTVATILPVCD----LRCGKEMHAYVRKCCLSSVIPVNNALVHMYSIRGCIAYACAVFSTMVAKDLVSWNTIIGGFGTHGLGQIALKLLQEMSDSGVRPDLVTFSCVLSACSHSGLVDEGIKLFYRMTKDLGLTPVREHFSCVVDMLARAGRLEEAFDFINQMPQEPDKHVWGALLAACQEHQNVSVGKVAAEKLISLEPQEAGHYVTLSNIYSRAGRWDDAARVRRMMKGHALLKPSGHSLVGI 1851
            K+L   K++ N I       +    +KL  +Y +C DL+ A  +  ++       +  +++  +K G     I  + K+  +GV  D Y F  V K+ + L  +  G  ++  ++  G      V NS++  Y K   V SA +VFDEM ERDV SWNS+++GYV NG  ++ + VF  M  +G E            CA   +                       NTL+D Y + G    A  VF E+   +V+S+T +I+GYA  G    ++ +F EM   G +SPDV  ++ VL  C     L  G  +H +  +   G D+F  +A   + A       +  A++VF  M   D+++WN +I G       + AL  F  + +E+    D  TVA +LP C        G+E+H Y+ +    S   V N+LV MY+  G +  A  +F  + +KDLVSW  +I G+G HG G+ A+ L  +M  +G+  D ++F  +L ACSHSGLVDEG + F  M  +  + P  EH++C+VDMLAR G L +A+ FI  MP  PD  +WGALL  C+ H +V + +  AEK+  LEP+  G+YV ++NIY+ A +W+   R+R+ +    L K  G S + I
Sbjct:  108 KSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG-ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS---MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEI 744          

HSP 2 Score: 149.828 bits (377), Expect = 1.684e-36
Identity = 137/550 (24.91%), Postives = 243/550 (44.18%), Query Frame = 1
Query:   19 CFNSLLGACKTLNQAKQLHNCILQTASHRNPFFVTKLIQIYADCNDLRSALTLLHQLSQPNVFAFTSILSFHSKHGHPHHCIQTYAKLRQNGVVPDGYVFPKVLKACAQLSRLGTGTVVYKDVIVFGAESNLQVRNSVLDMYSKCGDVWSATQVFDEMPERDVFSWNSMMSGYVCNGFPQRAVEVFRVMKGNGCECAPDVVT----------------------W-------------NTLMDAYCRMGKCCEAWRVFGEIEIPNVISWTILISGYASVGRHHVSLGIFREMVNVGMVSPDVDALSGVLVSCRALGALASGMEIHGYGLKIMYGDVFY-RSXXXXXXXXXXXXXRLDRADVVFRRMDKSDVVTWNAMIFXXXXXXXXXXALECFREMQERGLRIDGTTVATILPVCD----LRCGKEMHAYVR-KCCLSSVIPVNNALVHMYSIRGCIAYACAVFSTM-VAKDLVSWNTIIGGFGTHGLGQIALKLLQEMSDSGVRPDLVTFSCVLSACSHSGLVDEGIKLFYRMTKDLGLTPVREHFSC 1542
            C +    + ++++  +QLH  IL++           L+  Y     + SA  +  ++++ +V ++ SI++ +  +G     +  + ++  +G+  D      V   CA    +  G  V+   +        +  N++LDMYSKCGD+ SA  VF EM +R V S+ SM++GY   G    AV++F  M+  G   +PDV T                      W             N LMD Y + G   EA  VF E+ + ++ISW  +I GY+     + +L +F  ++     SPD   ++ VL +C +L A   G EIHGY   IM    F  R    +L+ +YA CG L  A ++F  +   D+V+W  MI G    G G  A+  F +M++ G+  D  +  ++L  C     +  G      +R +C +   +     +V M +  G +  A      M +  D   W  ++ G   H   ++A K+ +++ +  + P+   +  +++         E +K   R+ K +G   +R++  C
Sbjct:  200 CVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG--ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGY---IMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFE--LEPENTGYYVLMANIYAEAEKWEQVK---RLRKRIGQRGLRKNPGC 739          
BLAST of Phvul.003G244800.1 vs. DB:Swiss
Match: PPR47_ARATH (Putative pentatricopeptide repeat-containing protein At1g17630 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E72 PE=3 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 2.195e-101
Identity = 222/651 (34.10%), Postives = 338/651 (51.92%), Query Frame = 1
Query:    4 HNLTHCFNSLLGACKTLNQAKQLH-NCILQTASHRNPFFVTKLIQIYADCNDLRSALTLLHQLSQ---PNVFAFTSILSFHSKHGHPHHCIQTYAKLRQNGVVPDGYVFPKVLKACAQLSRLGTGTVVYKDVIVFGAESNLQVRNSVLDMYSKCGDVWSATQVFDEMPERDVFSWNSMMSGYVCNGFPQRAVEVFRVMKGNGCECAPDVVTWNTLMDAYCRMGKCCEAWRVFGEIEIPNVISWTILISGYASVGRHHVSLGIFREMVNVGMVSPDVDALSGVLVSCRALG-ALASGME---------IHGYGL--KIMYGDVFYRSXXX-------XXXXXXXXXXRLDRADVVFRRMD--------KSDVVTWNAMIFXXXXXXXXXXALECFREMQERGLRIDGTTVATILPVCD----LRCGKEMHAYVRKCCLSSVIPVNNALVHMYSIRGCIAYACAVFSTMVAKDLVSWNTIIGGFGTHGLGQIALKLLQEMSDSGVRPDLVTFSCVLSACSHSGLVDEGIKLFYRMTKDLGLTPVREHFSCVVDMLARAGRLEEAFDFINQMPQEPDKHVWGALLAACQEHQNVSVGKVAAEKLISLEPQEAGHYVTLSNIYSRAGRWDDAARVRRMMKGHALLKPSGHSLVGI 1851
             +L H F+ LLG C T  Q +Q+H   +L     R+      LI +YA    L  A  +   +S     ++  + SIL  +  HG   + ++ Y  +RQ G+  DGY+ P +L+AC  L R G     +  VI  G + NL V N +L +Y K G +  A  +F EMP R+  SWN M+ G+      + AV++F  M+    E  PD VTW +++  + + GK  +  + F            + +SG A  G    +L +F        V  +++ALS   ++ +  G  +  G E         IH YG   K+   +  +R           +L+  +   G+LD A  +F  ++        K++VVTW ++I G    G GD +LE FR+MQ   +  +  T+  IL +C     L  G+E+H +V +  +S  I V NALV+MY+  G ++    VF  +  KDL+SWN+II G+G HG  + AL +   M  SG  PD +    VLSACSH+GLV++G ++FY M+K  GL P +EH++C+VD+L R G L+EA + +  MP EP   V GALL +C+ H+NV + +  A +L  LEP+  G Y+ LSNIYS  GRW+++A VR + K   L K SG S + +
Sbjct:   53 QSLFHYFDHLLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQRE--EFKPDEVTWTSVLSCHSQCGKFEDVLKYFH----------LMRMSGNAVSGE---ALAVFFS------VCAELEALS---IAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEV 679          
BLAST of Phvul.003G244800.1 vs. DB:Swiss
Match: PP333_ARATH (Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E36 PE=3 SV=1)

HSP 1 Score: 328.946 bits (842), Expect = 9.753e-101
Identity = 210/654 (32.11%), Postives = 340/654 (51.99%), Query Frame = 1
Query:   22 FNSLLGACKTLNQAKQ---LHNCILQTASHRNPFFVTKLIQIYADCNDLRSALTLLHQLSQPNVFAFTSILSFHSKHGHPHHCIQTYAKLRQNGVVPDGYVFPKVLKACAQLSRLGTGTVVYKDVIVFGAESNLQVRNSVLDMYSKCGDVWSATQVFDEMPERDVFSWNSMMSGYVCNGFPQRAVEVFRVMKGNGCECAPDVVTWNTLM-----------------------------------DAYCRMGKCCEAWRVFGEIEIPNVISWTILISGYASVGRHHVSLGIFREMVNVGMVSPDVDALSGVLVSCRALGALASGMEIHGYGLKIMYGDVFYRSXXXXXXXXXXXXXRLDRADVVFRRMDKSDVVTWNAMIFXXXXXXXXXXALECFREMQERGLRIDGTTVATILPVC----DLRCGKEMHAYVRKCCLSSVIPVNNALVHMYSIRGCIAYACAVFSTMVAKDLVSWNTIIGGFGTHGLGQIALKLLQEMSD-SGVRPDLVTFSCVLSACSHSGLVDEGIKLFYRMTKDLGLTPVREHFSCVVDMLARAGRLEEAFDFINQMPQEPDKHVWGALLAACQEHQNVSVGKVAAEKLISLEPQEAGHYVTLSNIYSRAGRWDDAARVRRMMKGHALLKPSGHSLVGIG 1854
            F  L+ AC  L   K    L + +       N F  + LI+ Y +   +     L  ++ Q +   +  +L+ ++K G     I+ ++ +R + + P+   F  VL  CA    +  G  ++  V+V G +    ++NS+L MYSKCG    A+++F  M   D  +WN M+SGYV +G  + ++  F  M  +G    PD +T+++L+                                   DAY +      A  +F +    +V+ +T +ISGY   G +  SL +FR +V V  +SP+   L  +L     L AL  G E+HG+ +K  + +    + G A++ +YA CGR++ A  +F R+ K D+V+WN+MI           A++ FR+M   G+  D  +++  L  C        GK +H ++ K  L+S +   + L+ MY+  G +  A  VF TM  K++VSWN+II   G HG  + +L L  EM + SG+RPD +TF  ++S+C H G VDEG++ F  MT+D G+ P +EH++CVVD+  RAGRL EA++ +  MP  PD  VWG LL AC+ H+NV + +VA+ KL+ L+P  +G+YV +SN ++ A  W+   +VR +MK   + K  G+S + I 
Sbjct:  141 FPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGV--LPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVK-ISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRC--NIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEIN 789          

HSP 2 Score: 172.555 bits (436), Expect = 4.077e-44
Identity = 149/589 (25.30%), Postives = 269/589 (45.67%), Query Frame = 1
Query:   31 LLGACKT---LNQAKQLHNCILQTASHRNPFFVTKLIQIYADCNDLRSALTLLHQLS--QPNVFAFTSILSFHSKHGHPHHCIQTYAKLRQNGVVPDGYVFPKVLKACAQLSRLGTGTVVYKDVIVFGAESNLQVRNSVLDMYSKCGDVWSATQVFDEMPERDVFSWNSMMSGYVCNGFPQRAVEVFRVMKGNGCECAPDVVTW-----------------------------------NTLMDAYCRMGKCCEAWRVFGEIEIPNVISWTILISGYASVGRHHVSLGIFREMVNVGMVSPDVDALSGVLVSCRALGALASGMEIHGYGLK-IMYGDVFYRSXXXXXXXXXXXXXRLDRADVVFRRMDKSDVVTWNAMIFXXXXXXXXXXALECFREMQERGLRIDGTTVATILPVCD----LRCGKEMHAYVRKCCLSSVIPVNNALVHMYSIRGCIAYACAVFSTMVAKDLVSWNTIIGGFGTHGLGQIALKLLQEMSDSGVRPDLVTFSCVLSACSHSGLVDEGIKLFYRMTKDLGLTPVREHFSCVVDMLARAGRLEEAFDFINQMPQEPDKHVWGALLAACQEH 1662
            LL AC     L Q KQ+H  ++  +   + +   +++ +YA C        + ++L   + ++  + SI+S   ++G  +  +  Y K+   GV PD   FP ++KAC  L        +   V   G + N  V +S++  Y + G +   +++FD + ++D   WN M++GY   G     ++ F VM+ +  + +P+ VT+                                   N+L+  Y + G+  +A ++F  +   + ++W  +ISGY   G    SL  F EM++ G++ PD    S +L S      L    +IH Y ++  +  D+F  SA         G   +  A  +F + +  DVV + AMI G +  GL   +LE FR + +  +  +  T+ +ILPV      L+ G+E+H ++ K    +   +  A++ MY+  G +  A  +F  +  +D+VSWN++I           A+ + ++M  SG+  D V+ S  LSAC++      G  +   M K    + V    S ++DM A+ G L+ A +    M +E +   W +++AAC  H
Sbjct:   41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMD--QISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL-PDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRG---VSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSE-STLIDMYAKCGNLKAAMNVFKTM-KEKNIVSWNSIIAACGNH 621          

HSP 3 Score: 129.798 bits (325), Expect = 5.240e-30
Identity = 128/501 (25.55%), Postives = 233/501 (46.51%), Query Frame = 1
Query:  325 VLKACAQLSRLGTGTVVYKDVIVFGAESNLQVRNSVLDMYSKCGDVWSATQVFDEMPER--DVFSWNSMMSGYVCNGFPQRAVEVFRVMKGNGCECAPDVVTW----------------NTLMDAYCRMGKCC---------EAWRVFGEIEIP----------NVISWTILISGYASVGRHHVSLGIFREMVNVGMVSPDVDALSGVLVSCRALGALASGMEIHGYGLKIMYGDVFYRSXXXXXXXXXXXXXRLDRADVVFRRMDKSDVVTWNAMIFXXXXXXXXXXALECFREMQERGLRIDGTTVATILPVC----DLRCGKEMHAYVRKCCLSSVIPVNNALVHMY-SIRGCIAYACAVFSTMVAKDLVSWNTIIGGFGTHGLGQIALKLLQEMSDSGVRPDLVTFSCVLSACSHSGLVDEGIKLFYRMTKDLGLTPVREHFS-------CVVDMLARAGRLEEAFDFINQMPQEPDKHVWGALLAACQEHQNVSVG 1680
            +L+AC+  + L  G  V+  +IV     +      +L MY+ CG      ++F  +  R   +  WNS++S +V NG   +A+  +  M   G   +PDV T+                + L D    +G  C         +A+  +G+I++P          + + W ++++GYA  G     +  F  M  +  +SP+      VL  C +   +  G+++HG  L ++ G  F  S   +LL++Y+ CGR D A  +FR M ++D VTWN MI G V  GL + +L  F EM   G+  D  T +++LP      +L   K++H Y+ +  +S  I + +AL+  Y   RG ++ A  +FS   + D+V +  +I G+  +GL   +L++ + +    + P+ +T   +L           GI L  ++ ++L    +++ F         V+DM A+ GR+  A++   ++ +  D   W +++  C +  N S  
Sbjct:   41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGV--SPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVM-RMDQISPNAVTFDCVLSVCASKLLIDLGVQLHG--LVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRG-VSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVI--------GILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKR-DIVSWNSMITRCAQSDNPSAA 526          
BLAST of Phvul.003G244800.1 vs. DB:Swiss
Match: PP390_ARATH (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H92 PE=2 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 1.930e-100
Identity = 226/689 (32.80%), Postives = 339/689 (49.20%), Query Frame = 1
Query:   43 CKTLNQAKQLHNCILQTASHRNPFFVTKLIQIYADCNDLRSALTLLHQL--SQPNVFAFTSILSFHSKHGHPHHCIQTYAKLRQNGVVPDGYVFPKVLKACAQLSRLGTGTVVYKDVIVFGAESNLQVRNSVLDMYSKCGDVWSATQVFDEMPERDVFSWNSMMSGYVCNGFPQRAVEVFRVMKGNGCECAPDVVTW-----------------------------------NTLMDAYCRMGKCCEAWRVFGEIEIPNVISWTILISGYASVGRH-----------------------------------HVSLGIFREMVNVGMVSPDVDALSGVLVSCRALGALASGMEIHGYGLKIM-------YGDVFYRSXXXXXXXXXXXXXRLDRADVVFRRMD--KSDVVTWNAMIFXXXXXXXXXXALECFREMQERG--LRIDGTTVATILPVC----DLRCGKEMHAYVRKCCLSSV-IPVNNALVHMYSIRGCIAYACAVFSTMVAKDLVSWNTIIGGFGTHGLGQIALKLLQEMSDSGVRPDLVTFSCVLSACSHSGLVDEGIKLFYRMTKDLGLTPVREHFSCVVDMLARAGRLEEAFDFINQMPQEPDKHVWGALLAACQEHQNVSVGKVAAEKLISLEPQEAGHYVTLSNIYSRAGRWDDAARVRRMMKGHALLKPSGHSLV 1845
            CKT++Q K +H  +L           + LI  Y     L  A++LL +   S   V+ + S++  +  +G  + C+  +  +      PD Y FP V KAC ++S +  G   +   +V G  SN+ V N+++ MYS+C  +  A +VFDEM   DV SWNS++  Y   G P+ A+E+F  M  N   C PD +T                                    N L+D Y + G   EA  VF  + + +V+SW  +++GY+ +GR                                    + +LG+ R+M++ G + P+   L  VL  C ++GAL  G EIH Y +K         +GD         L+ +YA C ++D A  +F  +   + DVVTW  MI G    G  + ALE   EM E     R +  T++  L  C     LR GK++HAY  +   ++V + V+N L+ MY+  G I+ A  VF  M+AK+ V+W +++ G+G HG G+ AL +  EM   G + D VT   VL ACSHSG++D+G++ F RM    G++P  EH++C+VD+L RAGRL  A   I +MP EP   VW A L+ C+ H  V +G+ AAEK+  L     G Y  LSN+Y+ AGRW D  R+R +M+   + K  G S V
Sbjct:   38 CKTISQVKLIHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMT-NEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG-IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGD--ENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWV 721          

HSP 2 Score: 97.8265 bits (242), Expect = 7.371e-20
Identity = 87/368 (23.64%), Postives = 146/368 (39.67%), Query Frame = 1
Query:   28 SLLGACKTLNQ---AKQLHNCILQTASHRNPFFVTKLIQIYADCNDLRSALTLLHQLSQPNVFAFTSILSFHSKHGHPHHCIQTYAKLRQ-----------------------------------NGVVPDGYVFPKVLKACAQLSRLGTGTVVYKDVIVF-------GAESNLQVRNSVLDMYSKCGDVWSATQVFDEM--PERDVFSWNSMMSGYVCNGFPQRAVEVFRVMKGNGCECAPDVVTW------------------------------------NTLMDAYCRMGKCCEAWRVFGEIEIPNVISWTILISGYASVGRHHVSLGIFREMVNVGMVSPDVDALSGVLVSCRALGALASGME 882
            ++L  C +L      KQLH   + +   +N F    L+ +YA C  +  A T+   +S  +V ++ ++++ +S+ G     ++ + K+++                                   +G+ P+      VL  CA +  L  G  ++   I +       G      V N ++DMY+KC  V +A  +FD +   ERDV +W  M+ GY  +G   +A+E+   M    C+  P+  T                                     N L+D Y + G   +A  VF  +   N ++WT L++GY   G    +LGIF EM  +G     V  L  VL +C   G +  GME
Sbjct:  234 NVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLV-VLYACSHSGMIDQGME 600          
BLAST of Phvul.003G244800.1 vs. DB:Swiss
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 325.479 bits (833), Expect = 6.874e-100
Identity = 212/649 (32.67%), Postives = 331/649 (51.00%), Query Frame = 1
Query:   31 LLGACKTLNQAKQLHNCILQTASHRNPFFVTKLIQIYADCNDLRSALTLLHQL-SQPNVFAFTSILSFHSKHGHPHHCIQTYAKLRQNGVVPDGYVFPKVLKACAQLSRLGTGTVVYKDVIVFGAESNLQVRNSVLDMYSKCGDVWSATQVFDEMPERDVFSWNSMMSGYVCNGFPQRAVEVFRVMKGNGCE--CAPDVVTW-----------------------------------NTLMDAYCRMGKCCEAWRVFGEIEIPNVISWTILISGYASVGRHHVSLGIFREMVNVGMVSPDVDALSGVLVSCRALGALASGMEIHGYGLKIMYGDVFYRSXXXXXXXXXXXXXRLDRADVVFRRMDKSDVVTWNAMIFXXXXXXXXXXALECFREMQERGLRIDG-TTVATILPVCDLRC---GKEMHAYVRKCCLSSVIPVNNALVHMYSIRGCIAYACAVFSTMVAKDLVSWNTIIGGFGTHGLGQIALKLLQEMSDSGVRPDLVTFSCVLSACSHSGLVDEGIKLFYRMTKDLGLTPVREHFSCVVDMLARAGRLEEAFDFINQMPQEPDKHVWGALLAACQEHQNVSVGKVAAEKLISLEPQEAGHYVTLSNIYSRAGRWDDAARVRRMMKGHALLKPSGHSLVGI 1851
            LL  C +L + +Q+   + +   ++  FF TKL+ ++     +  A  +   + S+ NV   T +  F +K       +Q + ++R + V P  Y F  +LK C   + L  G  ++  ++  G   +L     + +MY+KC  V  A +VFD MPERD+ SWN++++GY  NG  + A+E+ + M    CE    P  +T                                      L+D Y + G    A ++F  +   NV+SW  +I  Y        ++ IF++M++ G+   DV  + G L +C  LG L  G  IH   L +  G     S   +L+++Y  C  +D A  +F ++    +V+WNAMI G    G    AL  F +M+ R ++ D  T V+ I  + +L      K +H  V + CL   + V  ALV MY+  G I  A  +F  M  + + +WN +I G+GTHG G+ AL+L +EM    ++P+ VTF  V+SACSHSGLV+ G+K FY M ++  +    +H+  +VD+L RAGRL EA+DFI QMP +P  +V+GA+L ACQ H+NV+  + AAE+L  L P + G++V L+NIY  A  W+   +VR  M    L K  G S+V I
Sbjct:   43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGF-AKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSM----CEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVM-GALHACADLGDLERGRFIHK--LSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEI 683          

HSP 2 Score: 140.969 bits (354), Expect = 1.138e-33
Identity = 104/419 (24.82%), Postives = 191/419 (45.58%), Query Frame = 1
Query:   10 LTHCFNSLLGAC---KTLNQAKQLHNCILQTASHRNPFFVTKLIQIYADCNDLRSALTLLHQLSQPNVFAFTSILSFHSKHGHPHHCIQTYAKLRQNGVVPDGYVFPKVLKACAQLSRLGTGTVVYKDVIVFGAESNLQVRNSVLDMYSKCGDVWSATQVFDEMPERDVFSWNSMMSGYVCNGFPQRAVEVFRVMKGNGCE------------CAP---------------------DVVTWNTLMDAYCRMGKCCEAWRVFGEIEIPNVISWTILISGYASVGRHHVSLGIFREMVNVGMVSPDVDALSGVLVSCRALGALASGMEIHGYGLKIMYGDVFYRSXXXXXXXXXXXXXRLDRADVVFRRMDKSDVVTWNAMIFXXXXXXXXXXALECFREMQERGLRIDGTTVATILPVC 1158
            + + F  LL  C     L   K++H  ++++    + F +T L  +YA C  +  A  +  ++ + ++ ++ +I++ +S++G     ++    + +  + P       VL A + L  +  G  ++   +  G +S + +  +++DMY+KCG + +A Q+FD M ER+V SWNSM+  YV N  P+ A+ +F+ M   G +            CA                      +V   N+L+  YC+  +   A  +FG+++   ++SW  +I G+A  GR   +L  F +M +   V PD      V+ +   L        IHG  ++       + +     +    G   + R  ++F  M +  V TWNAMI G    G G  ALE F EMQ+  ++ +G T  +++  C
Sbjct:  134 VVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS-RTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIAR--LIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISAC 549          
BLAST of Phvul.003G244800.1 vs. DB:Swiss
Match: PP237_ARATH (Pentatricopeptide repeat-containing protein At3g16610 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E91 PE=2 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 1.614e-99
Identity = 219/659 (33.23%), Postives = 342/659 (51.90%), Query Frame = 1
Query:   22 FNSLLGAC---KTLNQAKQLHNCILQ-TASHRNPFFVTKLIQIYADCNDLRSALTLLHQLSQP--NVFAFTSILSFHSKHGHPHHCIQTYAKLRQNGVVPDGYVFPKVLKACAQLSRLGTGTVVYKDVIVFGAESNLQVRNSVLDMYSKCGDVWSATQVFDEMPERDVFSWNSMMSGY----------------------------VCNGFPQRA-VEVFRVMKGNGCEC-----APDVVTWNTLMDAYCRMGKCCEAWRVFGEIEIPNVISWTILISGYASVGRHHVSLGIFREMV---NVGMVSPDVDALSGVLVSCRALGALASGMEIHGYGLKIMYGDVFYRSXXXXXXXXXXXXXRLDRADVVFRRMDKSDVVTWNAMIFXXXXXXXXXXALECFREMQERGLRIDGTTVATILPVCD----LRCGKEMHAYVRKCCLSSVIPVNNALVHMYSIRGCIAYACAVFSTMVAKDLVSWNTIIGGFGTHGLGQIALKLLQEMSDSGVRPDLVTFSCVLSACSHSGLVDEGIKLFYRMTK-DLGLTPVREHFSCVVDMLARAGRLEEAFDFINQMPQEPDKHVWGALLAACQEHQNVSVGKVAAEKLISL-EPQEAGHYVTLSNIYSRAGRWDDAARVRRMMKGHALLKPSGHSLVGI 1851
            F SLL  C   + L   + +H  +L+ + +  +   +  L ++YA CN++  A  +  ++  P  N  A+  ++  ++ +      +  Y K+  +GV P  Y +P VLKACA L  +  G +++  V      +++ V  +++D Y+KCG++  A +VFDEMP+RD+ +WN+M+SG+                            +   FP        R  K     C     + D+V    ++D Y +      A RVF      N ++W+ +I GY        +  +F +M+   NV MV+P   A+  +L+ C   G L+ G  +H Y +K   G +   +    +++ YA  G L  A   F  +   DV+++N++I G V     + +   F EM+  G+R D TT+  +L  C     L  G   H Y      +    + NAL+ MY+  G +  A  VF TM  +D+VSWNT++ GFG HGLG+ AL L   M ++GV PD VT   +LSACSHSGLVDEG +LF  M++ D  + P  +H++C+ D+LARAG L+EA+DF+N+MP EPD  V G LL+AC  ++N  +G   ++K+ SL E  E+   V LSN YS A RW+DAAR+R + K   LLK  G+S V +
Sbjct:    2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPV--AIGLILMGCARFGDLSGGRCVHCYAVKA--GFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTES--LVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654          
BLAST of Phvul.003G244800.1 vs. DB:Swiss
Match: PP146_ARATH (Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E47 PE=3 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 4.666e-99
Identity = 204/648 (31.48%), Postives = 325/648 (50.15%), Query Frame = 1
Query:   19 CFNSLLGACKTLNQAKQLHNCILQTASHRNPFFVTKLIQIYADCNDLRSALTLLHQLSQPNVFAFTSILSFHSKHGHPHHCIQTYAKLRQNGVVPDGYVFPKVLKACAQLSRLGTGTVVYKDVIVFGAESNLQVRNSVLDMYSKCGDVWSATQVFDEMPERDVFSWNSMMSGYVCNGFPQRAVEVFRVMKGN-----------------------------------GCECAPDVVTWNTLMDAYCRMGKCCEAWRVFGEIEIPNVISWTILISGYASVGRHHVSLGIFREMVNVGMVSPDVDALSGVLVSCRALGALASGMEIHGYGLKIMYGDVFYRSXXXXXXXXXXXXXRLDRADVVFRRMDKSDVVTWNAMIFXXXXXXXXXXALECFREMQERGLRIDGTTVATILPVC----DLRCGKEMHAYVRKCCL--SSVIPVNNALVHMYSIRGCIAYACAVFSTMVAKDLVSWNTIIGGFGTHGLGQIALKLLQEMSDSGVRPDLVTFSCVLSACSHSGLVDEGIKLFYRMTKDLGLTPVREHFSCVVDMLARAGRLEEAFDFINQMPQEPDKHVWGALLAACQEHQNVSVGKVAAEKLISLEPQEAGHYVTLSNIYSRAGRWDDAARVRRMMKGHALLKPSGHS 1839
            CF  LL  C  ++  +Q H  +       +    TKL+ +Y      + A  +  Q+ +P+ + +  +L  +  +      ++ Y  L ++G   D  VF K LKAC +L  L  G  ++  ++   +  N+ V   +LDMY+KCG++ SA +VF+++  R+V  W SM++GYV N   +  + +F  M+ N                                   G E +  +VT  +L+D Y + G    A RVF E    +++ WT +I GY   G  + +L +F++M  V  + P+   ++ VL  C  +  L  G  +HG  +K+   D    +   AL+ +YA C +   A  VF    + D+V WN++I G    G    AL  F  M    +  +G TVA++   C     L  G  +HAY  K     SS + V  AL+  Y+  G    A  +F T+  K+ ++W+ +IGG+G  G    +L+L +EM     +P+  TF+ +LSAC H+G+V+EG K F  M KD   TP  +H++C+VDMLARAG LE+A D I +MP +PD   +GA L  C  H    +G++  +K++ L P +A +YV +SN+Y+  GRW+ A  VR +MK   L K +GHS
Sbjct:   47 CF-LLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVT--SLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVE-IKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDT---NVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHS 686          

HSP 2 Score: 107.457 bits (267), Expect = 5.313e-23
Identity = 78/327 (23.85%), Postives = 141/327 (43.12%), Query Frame = 1
Query:   16 HCFNSLLGAC---KTLNQAKQLHNCILQTASHRNPFFVTKLIQIYADCNDLRSALTLLHQLSQPNVFAFTSILSFHSKHGHPHHCIQTYAKLRQNGVVPDGYVFPKVLKACAQLSRLGTGTVVYKDVIVFGAESNLQVRNSVLDMYSKCGDVWSATQVFDEMPERDVFSWNSMMSGYVCNGFPQRAVEVFRVMKGNGCECAPDVVT-------------------------------------WNTLMDAYCRMGKCCEAWRVFGEIEIPNVISWTILISGYASVGRHHVSLGIFREMVNVGMVSPDVDALSGVLVSCRALGALASG 876
            + + +L+ AC     L+Q K  H C++++    +   VT L+ +Y  C D+ +A  + ++ S  ++  +T+++  ++ +G  +  +  + K++   + P+      VL  C  +  L  G  V+   I  G   +  V N+++ MY+KC     A  VF+   E+D+ +WNS++SG+  NG    A+ +F  M  N     P+ VT                                        L+D Y + G    A  +F  IE  N I+W+ +I GY   G    SL +F EM+      P+    + +L +C   G +  G
Sbjct:  243 YTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM--NSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLK-KQQKPNESTFTSILSACGHTGMVNEG 565          
The following BLAST results are available for this feature:
BLAST of Phvul.003G244800.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
PP405_ARATH5.342e-10533.23Pentatricopeptide repeat-containing protein At5g39... [more]
PP350_ARATH9.688e-10432.41Pentatricopeptide repeat-containing protein At4g35... [more]
PP280_ARATH2.614e-10331.54Pentatricopeptide repeat-containing protein At3g53... [more]
PP320_ARATH1.654e-10132.76Pentatricopeptide repeat-containing protein DOT4, ... [more]
PPR47_ARATH2.195e-10134.10Putative pentatricopeptide repeat-containing prote... [more]
PP333_ARATH9.753e-10132.11Pentatricopeptide repeat-containing protein At4g21... [more]
PP390_ARATH1.930e-10032.80Pentatricopeptide repeat-containing protein At5g16... [more]
PPR32_ARATH6.874e-10032.67Pentatricopeptide repeat-containing protein At1g11... [more]
PP237_ARATH1.614e-9933.23Pentatricopeptide repeat-containing protein At3g16... [more]
PP146_ARATH4.666e-9931.48Pentatricopeptide repeat-containing protein At2g03... [more]
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InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 2..128
e-value: 2.3E-15
score: 58.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 129..201
e-value: 7.7E-16
score: 59.9
coord: 202..296
e-value: 4.4E-18
score: 67.2
coord: 310..402
e-value: 2.0E-15
score: 58.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 408..613
e-value: 1.0E-36
score: 128.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 210..596
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 202..232
e-value: 4.4E-9
score: 35.9
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 340..383
e-value: 9.2E-9
score: 35.4
coord: 436..484
e-value: 4.3E-12
score: 46.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 70..102
e-value: 0.0032
score: 15.5
coord: 207..232
e-value: 1.0E-4
score: 20.2
coord: 512..536
e-value: 0.0012
score: 16.8
coord: 474..507
e-value: 1.4E-4
score: 19.8
coord: 170..201
e-value: 5.8E-7
score: 27.3
coord: 439..472
e-value: 1.8E-5
score: 22.6
coord: 238..272
e-value: 4.9E-5
score: 21.2
coord: 342..375
e-value: 9.9E-7
score: 26.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 578..603
e-value: 0.17
score: 12.2
coord: 170..200
e-value: 2.3E-8
score: 33.7
coord: 512..537
e-value: 0.0079
score: 16.4
coord: 238..267
e-value: 9.9E-5
score: 22.3
coord: 142..168
e-value: 4.7E-4
score: 20.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 102..136
score: 5.371
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 309..339
score: 5.897
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 340..374
score: 11.411
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 508..538
score: 7.541
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 205..239
score: 10.983
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 574..608
score: 7.826
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 168..202
score: 11.433
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 240..270
score: 6.763
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 472..507
score: 10.194
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 137..167
score: 8.44
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 67..101
score: 9.032
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 36..66
score: 5.481
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 437..471
score: 11.422

Sequences
The following sequences are available for this feature:

protein sequence of Phvul.003G244800.1_Pv_G19833_v2.1

>Phvul.003G244800.1_Pv_G19833_v2.1 ID=Phvul.003G244800.1_Pv_G19833_v2.1; Name=Phvul.003G244800.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=620bp
MHNLTHCFNSLLGACKTLNQAKQLHNCILQTASHRNPFFVTKLIQIYADC
NDLRSALTLLHQLSQPNVFAFTSILSFHSKHGHPHHCIQTYAKLRQNGVV
PDGYVFPKVLKACAQLSRLGTGTVVYKDVIVFGAESNLQVRNSVLDMYSK
CGDVWSATQVFDEMPERDVFSWNSMMSGYVCNGFPQRAVEVFRVMKGNGC
ECAPDVVTWNTLMDAYCRMGKCCEAWRVFGEIEIPNVISWTILISGYASV
GRHHVSLGIFREMVNVGMVSPDVDALSGVLVSCRALGALASGMEIHGYGL
KIMYGDVFYRSAGAALLALYAGCGRLDRADVVFRRMDKSDVVTWNAMIFG
LVDVGLGDLALECFREMQERGLRIDGTTVATILPVCDLRCGKEMHAYVRK
CCLSSVIPVNNALVHMYSIRGCIAYACAVFSTMVAKDLVSWNTIIGGFGT
HGLGQIALKLLQEMSDSGVRPDLVTFSCVLSACSHSGLVDEGIKLFYRMT
KDLGLTPVREHFSCVVDMLARAGRLEEAFDFINQMPQEPDKHVWGALLAA
CQEHQNVSVGKVAAEKLISLEPQEAGHYVTLSNIYSRAGRWDDAARVRRM
MKGHALLKPSGHSLVGIGS*
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mRNA from alignment at Chr03:48132741..48135170+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Phvul.003G244800.1_Pv_G19833_v2.1 ID=Phvul.003G244800.1_Pv_G19833_v2.1; Name=Phvul.003G244800.1; organism=Phaseolus vulgaris; type=mRNA; length=2430bp; location=Sequence derived from: Chr03:48132741..48135170+ (Phaseolus vulgaris
CTCTGAGCGACCCACACCTTGCCATCAGCATCTCCAACATTGAGGCCTTG AGAATTACTCTGAGAATCTTCTTCAGGGAAAAAGGTGCAGCGAAAAGAAA CTCTCAGCAAATGACTAATATATAAAAAAGAAAAATGGTTAAGAATGAGG AAAAAAGAACCCATTCATTGATTCATTGTTCATTCATTCATGCATAACCT CACACACTGTTTCAACTCTCTGCTCGGAGCCTGCAAAACTCTGAACCAAG CAAAGCAACTCCACAACTGCATTCTCCAAACCGCTTCACACCGCAACCCT TTCTTTGTAACCAAGTTAATCCAAATCTACGCCGATTGCAACGACCTTCG CTCCGCACTCACCCTTCTCCACCAACTCTCCCAACCCAACGTCTTCGCCT TCACTTCCATCCTCTCCTTCCATTCCAAGCATGGACATCCACACCACTGC ATCCAAACCTACGCGAAACTGAGGCAAAACGGCGTCGTACCCGATGGCTA CGTCTTCCCCAAGGTGTTGAAAGCGTGTGCCCAGTTATCGCGCTTGGGAA CCGGCACTGTTGTGTACAAAGATGTCATTGTGTTTGGGGCAGAGTCCAAC TTGCAAGTTCGCAACTCCGTGTTGGATATGTACTCCAAATGTGGTGATGT TTGGAGTGCAACACAGGTTTTCGATGAAATGCCTGAAAGAGATGTTTTTT CGTGGAATTCCATGATGTCGGGTTACGTGTGTAATGGGTTTCCTCAGAGG GCTGTGGAGGTGTTCCGGGTTATGAAAGGGAATGGGTGTGAGTGTGCACC GGATGTTGTCACGTGGAACACGCTGATGGATGCTTATTGTAGGATGGGAA AGTGCTGCGAGGCTTGGAGGGTTTTTGGAGAGATTGAGATTCCTAATGTG ATTTCGTGGACGATTTTGATCTCGGGTTATGCTAGTGTTGGGAGGCATCA TGTTTCTTTGGGGATTTTTAGGGAGATGGTTAATGTGGGCATGGTTTCAC CTGATGTGGATGCTCTTTCTGGGGTGCTTGTGTCGTGCAGGGCTTTGGGG GCTTTGGCTAGTGGGATGGAGATTCATGGCTATGGCCTTAAAATCATGTA TGGGGACGTGTTTTATAGGTCTGCTGGTGCTGCATTGTTGGCATTGTATG CCGGTTGCGGGAGACTTGATCGTGCTGATGTTGTGTTTCGGAGGATGGAT AAGAGTGATGTTGTTACGTGGAATGCGATGATCTTTGGTTTGGTTGATGT GGGGTTGGGAGATCTGGCACTTGAATGTTTCAGAGAAATGCAGGAAAGGG GACTGAGGATTGATGGCACAACTGTGGCTACTATATTGCCTGTTTGTGAT TTGAGATGTGGAAAAGAGATGCATGCTTATGTTCGGAAATGCTGTCTCAG TTCTGTGATTCCGGTTAATAATGCGCTTGTTCATATGTACTCGATCCGTG GATGCATTGCGTATGCATGTGCTGTGTTTTCCACCATGGTGGCCAAGGAC TTGGTTTCATGGAACACGATTATTGGAGGGTTTGGAACACACGGGCTTGG CCAAATTGCTCTGAAGCTTTTGCAGGAGATGAGTGATTCAGGTGTTAGAC CTGATTTGGTGACCTTTTCGTGTGTACTTTCGGCTTGTAGTCATTCAGGA CTTGTGGATGAAGGGATCAAACTTTTCTACAGAATGACAAAAGACTTGGG TTTGACACCAGTGAGGGAACACTTTTCTTGTGTCGTTGACATGCTTGCCC GTGCTGGTAGGCTTGAAGAGGCTTTTGATTTCATAAACCAAATGCCCCAG GAACCAGATAAACATGTTTGGGGAGCTTTACTTGCTGCCTGCCAAGAACA CCAAAATGTTAGTGTTGGAAAAGTAGCTGCAGAAAAATTGATCAGTTTAG AACCCCAAGAAGCTGGTCATTATGTGACGCTATCAAATATATACTCAAGA GCTGGAAGATGGGATGATGCTGCAAGAGTAAGGAGGATGATGAAAGGCCA TGCATTGCTAAAGCCGTCAGGACATAGTTTGGTTGGTATTGGAAGTTAGC CTCTAAGGGGAACACAATCTGATCAAATCAATACGCATTGTCAAATTGGC ACCAAGAGTAAGAGGTGTGTGACTATGGATTGAGTTGCCTTGAGATGAGA CGGGGCAGTCTTCATTGTTAACAGATTTAGCCTTCACGGTATTGAAAACA AACTGTAGTACTTCCAAAAGACTGACACTTAGACAAATGCAGGGTCCAGA ACATTGTGGAAGCTAATAAAACTTACAAATGCAGAAAGGGGTTTAGTCAA ATTACAAGGTAACCAAATCTGGCTAAAATTGGCTATTGATCCTCTCTGAT GTGACCTGTATAACCTTGACTGCTTTGCAGTTAATGTTTACTAAAATTAG TTTATGAACACTTCTACTGTTAGGTCAGGG
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Coding sequence (CDS) from alignment at Chr03:48132741..48135170+

>Phvul.003G244800.1_Pv_G19833_v2.1 ID=Phvul.003G244800.1_Pv_G19833_v2.1; Name=Phvul.003G244800.1; organism=Phaseolus vulgaris; type=CDS; length=1860bp; location=Sequence derived from: Chr03:48132741..48135170+ (Phaseolus vulgaris
ATGCATAACCTCACACACTGTTTCAACTCTCTGCTCGGAGCCTGCAAAAC
TCTGAACCAAGCAAAGCAACTCCACAACTGCATTCTCCAAACCGCTTCAC
ACCGCAACCCTTTCTTTGTAACCAAGTTAATCCAAATCTACGCCGATTGC
AACGACCTTCGCTCCGCACTCACCCTTCTCCACCAACTCTCCCAACCCAA
CGTCTTCGCCTTCACTTCCATCCTCTCCTTCCATTCCAAGCATGGACATC
CACACCACTGCATCCAAACCTACGCGAAACTGAGGCAAAACGGCGTCGTA
CCCGATGGCTACGTCTTCCCCAAGGTGTTGAAAGCGTGTGCCCAGTTATC
GCGCTTGGGAACCGGCACTGTTGTGTACAAAGATGTCATTGTGTTTGGGG
CAGAGTCCAACTTGCAAGTTCGCAACTCCGTGTTGGATATGTACTCCAAA
TGTGGTGATGTTTGGAGTGCAACACAGGTTTTCGATGAAATGCCTGAAAG
AGATGTTTTTTCGTGGAATTCCATGATGTCGGGTTACGTGTGTAATGGGT
TTCCTCAGAGGGCTGTGGAGGTGTTCCGGGTTATGAAAGGGAATGGGTGT
GAGTGTGCACCGGATGTTGTCACGTGGAACACGCTGATGGATGCTTATTG
TAGGATGGGAAAGTGCTGCGAGGCTTGGAGGGTTTTTGGAGAGATTGAGA
TTCCTAATGTGATTTCGTGGACGATTTTGATCTCGGGTTATGCTAGTGTT
GGGAGGCATCATGTTTCTTTGGGGATTTTTAGGGAGATGGTTAATGTGGG
CATGGTTTCACCTGATGTGGATGCTCTTTCTGGGGTGCTTGTGTCGTGCA
GGGCTTTGGGGGCTTTGGCTAGTGGGATGGAGATTCATGGCTATGGCCTT
AAAATCATGTATGGGGACGTGTTTTATAGGTCTGCTGGTGCTGCATTGTT
GGCATTGTATGCCGGTTGCGGGAGACTTGATCGTGCTGATGTTGTGTTTC
GGAGGATGGATAAGAGTGATGTTGTTACGTGGAATGCGATGATCTTTGGT
TTGGTTGATGTGGGGTTGGGAGATCTGGCACTTGAATGTTTCAGAGAAAT
GCAGGAAAGGGGACTGAGGATTGATGGCACAACTGTGGCTACTATATTGC
CTGTTTGTGATTTGAGATGTGGAAAAGAGATGCATGCTTATGTTCGGAAA
TGCTGTCTCAGTTCTGTGATTCCGGTTAATAATGCGCTTGTTCATATGTA
CTCGATCCGTGGATGCATTGCGTATGCATGTGCTGTGTTTTCCACCATGG
TGGCCAAGGACTTGGTTTCATGGAACACGATTATTGGAGGGTTTGGAACA
CACGGGCTTGGCCAAATTGCTCTGAAGCTTTTGCAGGAGATGAGTGATTC
AGGTGTTAGACCTGATTTGGTGACCTTTTCGTGTGTACTTTCGGCTTGTA
GTCATTCAGGACTTGTGGATGAAGGGATCAAACTTTTCTACAGAATGACA
AAAGACTTGGGTTTGACACCAGTGAGGGAACACTTTTCTTGTGTCGTTGA
CATGCTTGCCCGTGCTGGTAGGCTTGAAGAGGCTTTTGATTTCATAAACC
AAATGCCCCAGGAACCAGATAAACATGTTTGGGGAGCTTTACTTGCTGCC
TGCCAAGAACACCAAAATGTTAGTGTTGGAAAAGTAGCTGCAGAAAAATT
GATCAGTTTAGAACCCCAAGAAGCTGGTCATTATGTGACGCTATCAAATA
TATACTCAAGAGCTGGAAGATGGGATGATGCTGCAAGAGTAAGGAGGATG
ATGAAAGGCCATGCATTGCTAAAGCCGTCAGGACATAGTTTGGTTGGTAT
TGGAAGTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_rpt
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding