Transcript Overview
| Name | rna-TanjilR_11678 |
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| Unique Name | rna-TanjilR_11678_La_Tanjil_v1.0 |
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| Type | mRNA |
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| Organism | Lupinus angustifolius (blue lupin) |
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| Sequence length | 2313 |
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| Product | hypothetical protein |
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks
Orthologs
Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| rna-TanjilR_11678 | rna-TanjilR_11678_La_Tanjil_v1.0-protein | Lupinus angustifolius | polypeptide |
| rna-TanjilR_11678_La_Tanjil_v1.0 | rna-TanjilR_11678_La_Tanjil_v1.0 | Lupinus angustifolius | polypeptide |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| rna-TanjilR_11678_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:21735389..21737701 | rna-TanjilR_11678_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:21735389..21737701 | Lupinus angustifolius | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| rna-TanjilR_11678_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:21735389..21737701 | rna-TanjilR_11678_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:21735389..21737701 | Lupinus angustifolius | CDS |
Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 371..391 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 538..562 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 449..469 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 545..561 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..19 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..45 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 337..354 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 324..364 |
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_11678_La_Tanjil_v1.0 ID=rna-TanjilR_11678_La_Tanjil_v1.0; Name=rna-TanjilR_11678; organism=Lupinus angustifolius; type=mRNA; length=2313bp
ATGAGCAACGCTAATCCCCAAATTCTCGACGAACCTCAAAACCCTAACCC
GAAATTCGCAGAACAAcaacatgaagaagaagaatcgGACCCACCAATGT
CACACCCAGATCCTCAATCTCCCAAAATCTTAACCCTTCTCGATCAAGAT
CCCCAAATTGGGAACCTTCACGATCTCGATGCTGCTGATTCTAACCCTAA
TCAGCACCCTAAATGTGAAGATATCGTTATTCAAGATCTGACCCAGGACC
TAAACGTGGAAGCGGAGGAACAAGAAGCATCTGATGGTGTCGCCGTCGTA
TCATCCACCGTCAGTCGTCGAGGTCTGAAGAGGAAGAAATTGGGATCGAA
GCGACGAAATGCTCAGGAGAGGCAGCTCCGTAAGAAGCTTAAGGTTCTTG
TCGAAACATTAAAACCCATTCCTTTTGTGCCATGTAAAGCTCTCGACTTT
GAAAGCCACAAGGTGCTGTTGCAGCATCTTGGAATCTGGGATTTTGTGCA
TATCGAGTTTGATACCGCGATCCGGGAGGATCTTGTCGCGGAACTCATTG
CTAGCTATGGGCAATCTACACGGTGTAGTTATGTCAATGGGTGTAGGATT
AATGTGAGTAGGGCTGATCTAGCACGTGCTTTGAAGTTGCCTGTGAAATT
GCCTTTGAAGAACACAGCTGCTTTGGTAGAGTCTGTTGAATTGGCTGAAT
CGATTGCGTTTGTTGAGGAATTGGTGTACACGTGGATGCTTTTGCATGAT
GATATGTTTGTAATGACAGATGATATTTTGGCATATCTGTTACTAATCAA
GGAGGGGCATTTTGAAAAGGTTGATTGGGCTGGTTTGATATGGAACATAA
TGGAAAAGGAACTGAAAGAGAAGTTGGTGAATTGTTACTATGCATCACAT
TTGCAGCAGTTGATTAAGACACAACACGGGGAGCTTCTGGAAGAGGCGCC
ACAGGTGGTGGTGGTAGTGGATGAGTCTAAGGGGAAAGGTGAGGGAGAAG
AGGTTGGGGTGAAGGATGAggaaggagaggatgaggaagacgatgatgAT
GTGAAGGATGAAGTGGATGGTAGCGGTGATGTGAAAATGGGTGGGGTTGA
TGAGAGTTGGGTTCATGAGTTGGAGGAGAACAAAATTGAATTGAGTCTGG
GACTGGATAATGCTGAGAGAGCTGAAGTGGAAAAGGAGCAGGAGCAGGTT
GGAGTGGATCAGATAATGGATTTTGAGCCGACTAAGGAAGAACATGGGAA
GTGGCTTTTGGATCAGAAGAACAATGTAGGGGAGCCCTTTTTGCTTCCAT
GTCATACTAGTAATATGAAGGTTATGGATTGTGGGGAAATGAAAGCGGAT
GAGGGAGAAGAAGGGCAAGATCAGGACAAGGAAGAAGATGTGGAAGAAGA
CCAGCATGTAGGTGGGTTCCATCTCTCACCGAAGATTATTCCGATGGAGG
GTATGCCTTCTGGGAGTCACCTTCAAGCAATGGATGCAGCACGAATGCCT
TTTGGTTCCGGTATTGATCTTTGTGACAACCATGTAGGTGATTTTGTCTC
TTCTAGAGATAATTGTCATATGATTGCTGGATCTTCACTTTTTGGTAATG
GTCACAATAGAGACATTGGCATGGATAATCATAACTCTCACCACTCTCTA
AATAGCAGTAACAAGCGGCTTAGAAGTGATAGCCCATGGAATTCTAAGCC
AGTTGACATTGAAATGTGCTTTGAGAATATGGAGCATTTGATGGGGAAAG
CTAGAATGCTGTATGCAGCAAAAGAACAGGCTTGTATAGAATGTACAAAT
AATCAGCAAGTCTTGCTTAATGAGCTACAGATGAGAGATAACATGATTGG
TCATTTGCATAAAGTAAAAATGGACGATAGTCATAAGATACATCGGCTTG
AGAAGGAACTTTATATGAGGACAAGCCTAGTGGAGGGCTACAGAAAGGCT
TTGAAGGAAACACAGAAGGCTTTTGCTGAATATAGAGCATCTTGTTCACA
AGTCGATGAACCACTTTACAAGGACGTTCCCGGGTCTGGTGGTCTTGTTT
TGAGTGTGAAGGAGTTTGAAAAGGAACGTTTgaggaaggaagaagaagaa
aagatggtGATGAGAGATTATGAAAAGAAGTTTAGAGATATTGAAGGAGC
TTGGATTAGTAAACTGGAAGGTCATTTGAGCAGTGTTCAATCCCTGGGTA
ATAGGTTGCTGGTTATTGGGGACAAAGTAAAACATCTGAATGAAGTGATT
GCTAAACGCAAGGTTGCAGATTCTCCTGGATGTGCTCCAACAAGTGAAGG
ACAAACTGCTTAG back to topprotein sequence of rna-TanjilR_11678_La_Tanjil_v1.0 >rna-TanjilR_11678_La_Tanjil_v1.0 ID=rna-TanjilR_11678_La_Tanjil_v1.0; Name=rna-TanjilR_11678_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=770bp
MSNANPQILDEPQNPNPKFAEQQHEEEESDPPMSHPDPQSPKILTLLDQD
PQIGNLHDLDAADSNPNQHPKCEDIVIQDLTQDLNVEAEEQEASDGVAVV
SSTVSRRGLKRKKLGSKRRNAQERQLRKKLKVLVETLKPIPFVPCKALDF
ESHKVLLQHLGIWDFVHIEFDTAIREDLVAELIASYGQSTRCSYVNGCRI
NVSRADLARALKLPVKLPLKNTAALVESVELAESIAFVEELVYTWMLLHD
DMFVMTDDILAYLLLIKEGHFEKVDWAGLIWNIMEKELKEKLVNCYYASH
LQQLIKTQHGELLEEAPQVVVVVDESKGKGEGEEVGVKDEEGEDEEDDDD
VKDEVDGSGDVKMGGVDESWVHELEENKIELSLGLDNAERAEVEKEQEQV
GVDQIMDFEPTKEEHGKWLLDQKNNVGEPFLLPCHTSNMKVMDCGEMKAD
EGEEGQDQDKEEDVEEDQHVGGFHLSPKIIPMEGMPSGSHLQAMDAARMP
FGSGIDLCDNHVGDFVSSRDNCHMIAGSSLFGNGHNRDIGMDNHNSHHSL
NSSNKRLRSDSPWNSKPVDIEMCFENMEHLMGKARMLYAAKEQACIECTN
NQQVLLNELQMRDNMIGHLHKVKMDDSHKIHRLEKELYMRTSLVEGYRKA
LKETQKAFAEYRASCSQVDEPLYKDVPGSGGLVLSVKEFEKERLRKEEEE
KMVMRDYEKKFRDIEGAWISKLEGHLSSVQSLGNRLLVIGDKVKHLNEVI
AKRKVADSPGCAPTSEGQTA back to topmRNA from alignment at Chr_LG08-CM007368.1:21735389..21737701+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna-TanjilR_11678_La_Tanjil_v1.0 ID=rna-TanjilR_11678_La_Tanjil_v1.0; Name=rna-TanjilR_11678; organism=Lupinus angustifolius; type=mRNA; length=2313bp; location=Sequence derived from: Chr_LG08-CM007368.1:21735389..21737701+ (Lupinus angustifolius
ATGAGCAACGCTAATCCCCAAATTCTCGACGAACCTCAAAACCCTAACCC
GAAATTCGCAGAACAAcaacatgaagaagaagaatcgGACCCACCAATGT
CACACCCAGATCCTCAATCTCCCAAAATCTTAACCCTTCTCGATCAAGAT
CCCCAAATTGGGAACCTTCACGATCTCGATGCTGCTGATTCTAACCCTAA
TCAGCACCCTAAATGTGAAGATATCGTTATTCAAGATCTGACCCAGGACC
TAAACGTGGAAGCGGAGGAACAAGAAGCATCTGATGGTGTCGCCGTCGTA
TCATCCACCGTCAGTCGTCGAGGTCTGAAGAGGAAGAAATTGGGATCGAA
GCGACGAAATGCTCAGGAGAGGCAGCTCCGTAAGAAGCTTAAGGTTCTTG
TCGAAACATTAAAACCCATTCCTTTTGTGCCATGTAAAGCTCTCGACTTT
GAAAGCCACAAGGTGCTGTTGCAGCATCTTGGAATCTGGGATTTTGTGCA
TATCGAGTTTGATACCGCGATCCGGGAGGATCTTGTCGCGGAACTCATTG
CTAGCTATGGGCAATCTACACGGTGTAGTTATGTCAATGGGTGTAGGATT
AATGTGAGTAGGGCTGATCTAGCACGTGCTTTGAAGTTGCCTGTGAAATT
GCCTTTGAAGAACACAGCTGCTTTGGTAGAGTCTGTTGAATTGGCTGAAT
CGATTGCGTTTGTTGAGGAATTGGTGTACACGTGGATGCTTTTGCATGAT
GATATGTTTGTAATGACAGATGATATTTTGGCATATCTGTTACTAATCAA
GGAGGGGCATTTTGAAAAGGTTGATTGGGCTGGTTTGATATGGAACATAA
TGGAAAAGGAACTGAAAGAGAAGTTGGTGAATTGTTACTATGCATCACAT
TTGCAGCAGTTGATTAAGACACAACACGGGGAGCTTCTGGAAGAGGCGCC
ACAGGTGGTGGTGGTAGTGGATGAGTCTAAGGGGAAAGGTGAGGGAGAAG
AGGTTGGGGTGAAGGATGAggaaggagaggatgaggaagacgatgatgAT
GTGAAGGATGAAGTGGATGGTAGCGGTGATGTGAAAATGGGTGGGGTTGA
TGAGAGTTGGGTTCATGAGTTGGAGGAGAACAAAATTGAATTGAGTCTGG
GACTGGATAATGCTGAGAGAGCTGAAGTGGAAAAGGAGCAGGAGCAGGTT
GGAGTGGATCAGATAATGGATTTTGAGCCGACTAAGGAAGAACATGGGAA
GTGGCTTTTGGATCAGAAGAACAATGTAGGGGAGCCCTTTTTGCTTCCAT
GTCATACTAGTAATATGAAGGTTATGGATTGTGGGGAAATGAAAGCGGAT
GAGGGAGAAGAAGGGCAAGATCAGGACAAGGAAGAAGATGTGGAAGAAGA
CCAGCATGTAGGTGGGTTCCATCTCTCACCGAAGATTATTCCGATGGAGG
GTATGCCTTCTGGGAGTCACCTTCAAGCAATGGATGCAGCACGAATGCCT
TTTGGTTCCGGTATTGATCTTTGTGACAACCATGTAGGTGATTTTGTCTC
TTCTAGAGATAATTGTCATATGATTGCTGGATCTTCACTTTTTGGTAATG
GTCACAATAGAGACATTGGCATGGATAATCATAACTCTCACCACTCTCTA
AATAGCAGTAACAAGCGGCTTAGAAGTGATAGCCCATGGAATTCTAAGCC
AGTTGACATTGAAATGTGCTTTGAGAATATGGAGCATTTGATGGGGAAAG
CTAGAATGCTGTATGCAGCAAAAGAACAGGCTTGTATAGAATGTACAAAT
AATCAGCAAGTCTTGCTTAATGAGCTACAGATGAGAGATAACATGATTGG
TCATTTGCATAAAGTAAAAATGGACGATAGTCATAAGATACATCGGCTTG
AGAAGGAACTTTATATGAGGACAAGCCTAGTGGAGGGCTACAGAAAGGCT
TTGAAGGAAACACAGAAGGCTTTTGCTGAATATAGAGCATCTTGTTCACA
AGTCGATGAACCACTTTACAAGGACGTTCCCGGGTCTGGTGGTCTTGTTT
TGAGTGTGAAGGAGTTTGAAAAGGAACGTTTgaggaaggaagaagaagaa
aagatggtGATGAGAGATTATGAAAAGAAGTTTAGAGATATTGAAGGAGC
TTGGATTAGTAAACTGGAAGGTCATTTGAGCAGTGTTCAATCCCTGGGTA
ATAGGTTGCTGGTTATTGGGGACAAAGTAAAACATCTGAATGAAGTGATT
GCTAAACGCAAGGTTGCAGATTCTCCTGGATGTGCTCCAACAAGTGAAGG
ACAAACTGCTTAG back to topCoding sequence (CDS) from alignment at Chr_LG08-CM007368.1:21735389..21737701+ >rna-TanjilR_11678_La_Tanjil_v1.0 ID=rna-TanjilR_11678_La_Tanjil_v1.0; Name=rna-TanjilR_11678; organism=Lupinus angustifolius; type=CDS; length=2313bp; location=Sequence derived from: Chr_LG08-CM007368.1:21735389..21737701+ (Lupinus angustifolius
ATGAGCAACGCTAATCCCCAAATTCTCGACGAACCTCAAAACCCTAACCC
GAAATTCGCAGAACAAcaacatgaagaagaagaatcgGACCCACCAATGT
CACACCCAGATCCTCAATCTCCCAAAATCTTAACCCTTCTCGATCAAGAT
CCCCAAATTGGGAACCTTCACGATCTCGATGCTGCTGATTCTAACCCTAA
TCAGCACCCTAAATGTGAAGATATCGTTATTCAAGATCTGACCCAGGACC
TAAACGTGGAAGCGGAGGAACAAGAAGCATCTGATGGTGTCGCCGTCGTA
TCATCCACCGTCAGTCGTCGAGGTCTGAAGAGGAAGAAATTGGGATCGAA
GCGACGAAATGCTCAGGAGAGGCAGCTCCGTAAGAAGCTTAAGGTTCTTG
TCGAAACATTAAAACCCATTCCTTTTGTGCCATGTAAAGCTCTCGACTTT
GAAAGCCACAAGGTGCTGTTGCAGCATCTTGGAATCTGGGATTTTGTGCA
TATCGAGTTTGATACCGCGATCCGGGAGGATCTTGTCGCGGAACTCATTG
CTAGCTATGGGCAATCTACACGGTGTAGTTATGTCAATGGGTGTAGGATT
AATGTGAGTAGGGCTGATCTAGCACGTGCTTTGAAGTTGCCTGTGAAATT
GCCTTTGAAGAACACAGCTGCTTTGGTAGAGTCTGTTGAATTGGCTGAAT
CGATTGCGTTTGTTGAGGAATTGGTGTACACGTGGATGCTTTTGCATGAT
GATATGTTTGTAATGACAGATGATATTTTGGCATATCTGTTACTAATCAA
GGAGGGGCATTTTGAAAAGGTTGATTGGGCTGGTTTGATATGGAACATAA
TGGAAAAGGAACTGAAAGAGAAGTTGGTGAATTGTTACTATGCATCACAT
TTGCAGCAGTTGATTAAGACACAACACGGGGAGCTTCTGGAAGAGGCGCC
ACAGGTGGTGGTGGTAGTGGATGAGTCTAAGGGGAAAGGTGAGGGAGAAG
AGGTTGGGGTGAAGGATGAggaaggagaggatgaggaagacgatgatgAT
GTGAAGGATGAAGTGGATGGTAGCGGTGATGTGAAAATGGGTGGGGTTGA
TGAGAGTTGGGTTCATGAGTTGGAGGAGAACAAAATTGAATTGAGTCTGG
GACTGGATAATGCTGAGAGAGCTGAAGTGGAAAAGGAGCAGGAGCAGGTT
GGAGTGGATCAGATAATGGATTTTGAGCCGACTAAGGAAGAACATGGGAA
GTGGCTTTTGGATCAGAAGAACAATGTAGGGGAGCCCTTTTTGCTTCCAT
GTCATACTAGTAATATGAAGGTTATGGATTGTGGGGAAATGAAAGCGGAT
GAGGGAGAAGAAGGGCAAGATCAGGACAAGGAAGAAGATGTGGAAGAAGA
CCAGCATGTAGGTGGGTTCCATCTCTCACCGAAGATTATTCCGATGGAGG
GTATGCCTTCTGGGAGTCACCTTCAAGCAATGGATGCAGCACGAATGCCT
TTTGGTTCCGGTATTGATCTTTGTGACAACCATGTAGGTGATTTTGTCTC
TTCTAGAGATAATTGTCATATGATTGCTGGATCTTCACTTTTTGGTAATG
GTCACAATAGAGACATTGGCATGGATAATCATAACTCTCACCACTCTCTA
AATAGCAGTAACAAGCGGCTTAGAAGTGATAGCCCATGGAATTCTAAGCC
AGTTGACATTGAAATGTGCTTTGAGAATATGGAGCATTTGATGGGGAAAG
CTAGAATGCTGTATGCAGCAAAAGAACAGGCTTGTATAGAATGTACAAAT
AATCAGCAAGTCTTGCTTAATGAGCTACAGATGAGAGATAACATGATTGG
TCATTTGCATAAAGTAAAAATGGACGATAGTCATAAGATACATCGGCTTG
AGAAGGAACTTTATATGAGGACAAGCCTAGTGGAGGGCTACAGAAAGGCT
TTGAAGGAAACACAGAAGGCTTTTGCTGAATATAGAGCATCTTGTTCACA
AGTCGATGAACCACTTTACAAGGACGTTCCCGGGTCTGGTGGTCTTGTTT
TGAGTGTGAAGGAGTTTGAAAAGGAACGTTTgaggaaggaagaagaagaa
aagatggtGATGAGAGATTATGAAAAGAAGTTTAGAGATATTGAAGGAGC
TTGGATTAGTAAACTGGAAGGTCATTTGAGCAGTGTTCAATCCCTGGGTA
ATAGGTTGCTGGTTATTGGGGACAAAGTAAAACATCTGAATGAAGTGATT
GCTAAACGCAAGGTTGCAGATTCTCCTGGATGTGCTCCAACAAGTGAAGG
ACAAACTGCTTAG back to top
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