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Transcript Overview
Name | rna-TanjilR_07207 |
Unique Name | rna-TanjilR_07207_La_Tanjil_v1.0 |
Type | mRNA |
Organism | Lupinus angustifolius (blue lupin) |
Sequence length | 7985 |
Product | hypothetical protein |
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks
Orthologs
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Species | Type |
rna-TanjilR_07207 | rna-TanjilR_07207_La_Tanjil_v1.0-protein | Lupinus angustifolius | polypeptide |
rna-TanjilR_07207_La_Tanjil_v1.0 | rna-TanjilR_07207_La_Tanjil_v1.0 | Lupinus angustifolius | polypeptide |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
rna-TanjilR_07207_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22373139..22373265 | rna-TanjilR_07207_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22373139..22373265 | Lupinus angustifolius | exon |
rna-TanjilR_07207_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22373901..22373990 | rna-TanjilR_07207_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22373901..22373990 | Lupinus angustifolius | exon |
rna-TanjilR_07207_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22375528..22375641 | rna-TanjilR_07207_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22375528..22375641 | Lupinus angustifolius | exon |
rna-TanjilR_07207_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22376123..22376156 | rna-TanjilR_07207_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22376123..22376156 | Lupinus angustifolius | exon |
rna-TanjilR_07207_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22378006..22378144 | rna-TanjilR_07207_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22378006..22378144 | Lupinus angustifolius | exon |
rna-TanjilR_07207_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22378242..22378298 | rna-TanjilR_07207_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22378242..22378298 | Lupinus angustifolius | exon |
rna-TanjilR_07207_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22379060..22379157 | rna-TanjilR_07207_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22379060..22379157 | Lupinus angustifolius | exon |
rna-TanjilR_07207_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22379487..22379701 | rna-TanjilR_07207_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22379487..22379701 | Lupinus angustifolius | exon |
rna-TanjilR_07207_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22380200..22380405 | rna-TanjilR_07207_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22380200..22380405 | Lupinus angustifolius | exon |
rna-TanjilR_07207_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22380631..22380831 | rna-TanjilR_07207_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22380631..22380831 | Lupinus angustifolius | exon |
rna-TanjilR_07207_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22381046..22381123 | rna-TanjilR_07207_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22381046..22381123 | Lupinus angustifolius | exon |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
rna-TanjilR_07207_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22373139..22373265 | rna-TanjilR_07207_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22373139..22373265 | Lupinus angustifolius | CDS |
rna-TanjilR_07207_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22373901..22373990 | rna-TanjilR_07207_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22373901..22373990 | Lupinus angustifolius | CDS |
rna-TanjilR_07207_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22375528..22375641 | rna-TanjilR_07207_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22375528..22375641 | Lupinus angustifolius | CDS |
rna-TanjilR_07207_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22376123..22376156 | rna-TanjilR_07207_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22376123..22376156 | Lupinus angustifolius | CDS |
rna-TanjilR_07207_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22378006..22378144 | rna-TanjilR_07207_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22378006..22378144 | Lupinus angustifolius | CDS |
rna-TanjilR_07207_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22378242..22378298 | rna-TanjilR_07207_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22378242..22378298 | Lupinus angustifolius | CDS |
rna-TanjilR_07207_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22379060..22379157 | rna-TanjilR_07207_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22379060..22379157 | Lupinus angustifolius | CDS |
rna-TanjilR_07207_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22379487..22379701 | rna-TanjilR_07207_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22379487..22379701 | Lupinus angustifolius | CDS |
rna-TanjilR_07207_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22380200..22380405 | rna-TanjilR_07207_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22380200..22380405 | Lupinus angustifolius | CDS |
rna-TanjilR_07207_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22380631..22380831 | rna-TanjilR_07207_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22380631..22380831 | Lupinus angustifolius | CDS |
rna-TanjilR_07207_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22381046..22381123 | rna-TanjilR_07207_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22381046..22381123 | Lupinus angustifolius | CDS |
Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 190..210 |
None | No IPR available | COILS | Coil | Coil | coord: 162..182 |
None | No IPR available | GENE3D | 4.10.1000.10 | | coord: 1..36 e-value: 3.8E-7 score: 31.4 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 78..97 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 78..145 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 116..132 |
IPR000571 | Zinc finger, CCCH-type | SMART | SM00356 | c3hfinal6 | coord: 6..31 e-value: 0.0043 score: 26.3 |
IPR000571 | Zinc finger, CCCH-type | PROSITE | PS50103 | ZF_C3H1 | coord: 6..32 score: 12.962 |
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_07207_La_Tanjil_v1.0 ID=rna-TanjilR_07207_La_Tanjil_v1.0; Name=rna-TanjilR_07207; organism=Lupinus angustifolius; type=mRNA; length=7985bp ATGGTTGAACGAAAGCAATTCAAGACGAGGTTATGTGTGCTCTACCAGAA AGGTCGATGTAACCGAAATAACTGCTCCTTTGCGCATGGGAACGTCGAGC TGCGACGATTCTCTGCCTCATCTAGTGGTAATTTTTTAGCTTTGAATTGT TTGCTTCATTCTATATCTTGCGGGTTGAGGtgaatgtgatttttaatgta atatctatgttgTTAATTGAAGGATGATTATTGATGTATCAGGCACAACA CTCTGTGTGATATTGTTACTTAGATTTTGGTTGACAGTGCATtagacaag cgtgcagttgaTTAAGTTAAATGCTTTATTTGGATaatagtgtttttatt ttagtagaACTAGCAGATTATCACTGAGGAAACCGCATAAAAGAGAAATA AGCAATGTGCAAATTGGTACATTCACTTGCTGGTTAACATGCTACTATTT CAATTACTCTTGGTTTTAAtgtagagaataaaatatgtcCTCATTTAAAG GAGATACTTAAATCTATTAATTGTTTGACACATGttttatttcacttttt ttttaaattattataaaataaagaattaGACACGTGTCAAACAGACAATA AATTCAAGGAGATAAGTTATGTCAGGAAAtactcttgttttttttttccc tCCTAGGAAACTTCCTCCAATAACTCCATCAGAGCAGActatctaatatt tattttccagATCATTTCAGCTCCATCaaattttcttccttttgttttCA CATTCTCTTTAGAGGGCGAGCCCCAACTCATTGTTAGGTTGCCTCTTAGT GACCAAgaggtcacaggttcaaatcttgaaaatatCCTCTCTGCTTGCAA GGGTAAGCCTACTTGCATCTATCCTCCCAGACCCCATTAGGTGAGAGTCT CGTATATTGGGCCGCCCTTTTTGTTTTCACAttctttttgttgttataaT TTCTTGTCTATTTCATTTCAtgcaattttatatcattaccATTGAACCTT TTTTCTAATACTTCCTCCCTATGCCAATATCAAGCTGTATTTCTTTTATG GAGTGTTGACTTCAAAAGATTGTTCCAGAATGAAACTTATACTCAAGTTT GAAGTGCTAGCTGTTGCTTCTTGCAGATATATGCGGTTTGTTGGTGTCTT TGGATTATTTGTGGTCCCTAGTTCTGTGTCTTTCTTTCTTTGTATCATGA CTTGTACATTAGCCTATAACTATTATTCATGGGATATAAGGCTGTTTAAA TGGAGGGGGGTCTGAGTTCTGTCGTATATTTGTGATAACGTGCTGAACTT GAATGGGAAAATTCACTAATGATGAGAAGAAAAAGCATTGTATGATGATA ATATACTGAAGGAGAAAAATGTgaggaaatatattatttacagaAGATGC ATCTGAACTGTCATGGTATTTGCTGTAAACCCATTATTCACACCCCGGCT TGTTTCATGAACACTATGTTATTCCATTTGTTTAGCTGGAATCCACGTCC TTAAAAAACTGAGGATCAGGATACTTTTCTAATAGACTGGTCCATATGTG CAGTTGGTTCTGTGTAAGAGCCCCAAGCTTAGATGTGCAATTACAAATAG CATATGAGGTTAATGTCTGATTAATTTATTCAATGATAGAACTTCTGGTC ACATTATCATGTCGAGACTAATGCATTTCCAGCAGTATGGGTATTCGATT TTAGTTGAAAGATTCTTCAGAATGGATTGTGCTGTTTGGTATTGTTGAAG GCATTATTTTTTCCATGGCAACCATTTTATGCTTCATTCAATAAATCTAT GGTACTGCAGTTTTTCCTGAAGGATCATGATTGTGCTTATGTGGCTATGT CGGCTGGCATCATATTTTGATCTGGAGCAAGTTCCGCGAATTTCTTAATC ATTTAATGTACAAATGTACTGCTTGAGTGTATGGaccttattttattaat tgattgataCTTCTGGATAAGATGTGGCTACTTGGACAAAGGCACGTGGA GTTGTTAGTGGAGAATATATCATGAGAAACCAAATCTGATAGCATGTGGA TggatttttatttcttatgtaTCTTGGAAATATCTCTACATTTGAGATTG TATTTTATATCTTACTGCTCAACAATATGAGGACGTGAACTGTTCGTAAT CTATTGCTACCTTGATTACACGATAAAAGCTGTGGATTTTTATATATGTC ATAATATGAGGGCACTAGTTTCTATCGTCCTTTTGGCATAACATGGGAGG CACTATTACTATTCATTAATATGTTTCTCTTGTTATTCTGGTTAATGGTA AGCTTgatcttattgttgttgtttgtatCTTCAGAATGTGCTGATTTTAA TTGTAGTCAGTAATGATGTACCTTATTTTCTTATTGCAGGGAGGAGAGAA TATTCAGGTAATGACTTGAGGGATAAACTTGACAGAAGGCATTTATCACC TCCTCGAAGGTACTCACCAGCTAGAGATGGAAGAGGCGGCCAGGCTACTC ATGGTCAGACACATCATCTTATATTTCTGATTGCTCTTgtttataattat catttttttagtttagtGTATAATTGAGGTGCAACTTCACTATCACTTAT ATGAATAGATTATATTTCCGTGATAGCAGTTTTACATATTGACATTATTT GAGATGGATGCTTTGGTTGTGTGTCATATAACCATTTCCTAGATTTTAAC AGATCTTTAAGCAAGAGACTGACAGAGACAtcatttctctctcattttGT CTTGCATTTTCTGTATGCTATAAAGAATTTTCTCTCCTACCTGCATAATT ACGCACCTATTTACCTGTGCATAAATGGAAGTTCgcatttatatattttg gttttatttcttCATGTACATGATCGTTTACCTTTCTGCTTATATACAAT CTCACACGCTCATACTGTTTAACTTAATGAAATtccctttctctcttttc taatgcCCCATCTTCCATGATTTAAAAATTGCAGGGTACAGTCCGTCAAG GTCCTCAGAGAAAAAAAGGTAAATAGGCATGACACAGAATCACTATCGAT AGtcatgtttatatttatattgccATTGTTGTCTACCTTTTTTGATATAA ATTGTTGATGCTATAACGTGGATGTACACTTAGATATGCTTTATTAGAGA GTGGAAATGGTGAAATTCATAATTATACTTAGAAATTATATCTTGATAGT GATTGGCATTGATTGGGAGAGTGTCATCGACATGGTGGTAGTGgaagaaa acaaagaaggaTCAAAAGTATTTTCAAAAGGAAGCAAATcattaacaaca aaaattttACCCCCACGATGCACATTAGCATTACATATATAATTCTCACT ACATAATGCAAAACCTTTTTTTTCTGTAGAAAAGATAAAATTCCATTACC ACAAACAAATTTACATCAAAACGGAAGAAAAATTACGTGAGAGGAGAGCT ACCTTCTATGAAGGGTTCCCTCCAAGACACATAATCCCAAAGAAAAAGCA TGTTATCCTATATCCAGAAAGTACCAGACTGCAGGTGTGGCTTAGTTAGC GGCGCAGATCAATTAGAACCAAATTAATCTATGGTTCCTTTTAGAGAGAG GCATTTTGAACGGGACTCTGCTGCTTCATATCAGTTGTCCTTGATAGGAA ccaaccaaataaagaaagaatTGGCAGAGAATTTAGGGAAACAAGTGCAG AATGTATTTACTGATAGTAGAAAAAGAAAAGTGCAGAGTATAAGGTACAG AAATGACTTATTAGTGTGATGACAGAAACACAATACAAGAGGAATAATTT CCTTCTCCCAGTGACACAGTCACCCCCTAATTCCCCCAAATGATTGCCTG CCTTATTCGTACTCCTCTCTGTCCTCATATTCACCTTCTTACTCTGATTC TAGGATCTTCCTAACCAACCAACTCCTGCCACGTGTCTGGTTAGTTAGAG TCATGTGTCACAAGCccctttttcttccttttccggTATACCCttactct ctttctttcttctctgaAATACCCTCCTAATTGGAGGCCTAACAACCCTC AAGCAGCCTTTCACATCTTATTTTAAACTTTTCgcattttgaaaaatatg aacATATGTAAGGAAGACATTGGACAACTGTCcttaaaaaatatgaacat CCATAAGATGAAGAAGCACAATGCTTCCTTTTCAAGTTTGGtttgaaaat agaaataaaaaagcTTTAATGAAATGCTATGTTGCAACTTCTATTATAGG ATAAAAAAGAATCAGTGAAATAGATTATTCCAGTTATTAGGGAAAGAAGT TATGGCACTACTTTTTTATAAGCAATTATGATTACAACTAAAAACACAAA AGGTGTAAATATTTAAGTATAAGAAGTAtctttaaaaaagtaacaaCAAC CGAGCCTTTAACCCCACAGGTGGAGTTGGCTACTAGGATCGAACGATGCC GTAAATCATGTTCATctttgaaaaagtaaagaaatatatttttttaataa ttgtatagTGAACCAAAGAATTCTACCCCTTATGCATTGCATCTGTTTTT TAGTAACCTATCCCAGACCCGTTCCCACAGCACATATCCGGACGTACTGT GTTCCTAGTTGAGCATGGCAGGCTTATAGTTTAAAGGtgtgtttttaata attagaGGTACAGGGTTAGTGAGGATTAACATTTGATGCCAAGAAACTTA TTTAGGGAACTagttatatcaaaattatgttttcacTCTTCAGCCACCTA ATGACTGGAATGTGCTTATGTGCCTCCCTTGGGCCAAATCTTCCATTTGT TTGTctagtattttattttgtttcagaTCCTTAATATTAGTCTAAATATC AGTAATTACTATCGCAGTGACAGAAGGCATATAAGGAAGCAAGGAACTAC CGGCCAACATGATAATCCTGGAAGTTTAAACTTCTCGGATAGAATTCAAG ATCAAGTTAGGGGCAAATTGTTTACCTCTGGTTCTAGAAATACGCTTGAT GAGCAGGTTTGGAAATTCTGTTTAACCCTTCCATCGTTCATATGTATAAG ATATTCCCTTGTTCATTCTGTGAaaattgtatttgttttggTAATGTGTG CAGCTGAAGAAAGTAGAGTCAGATATCAACACTCTTCAGAACCAAAAATT CCAACTAGAGGTTGGTTTTCATCTCTCGGAGATGTAGTtacattttatca ttatttctaAGCGTTCTCTGtgcattttttgtttctttgctTTGACACCT AGAAGTATTGGTTATGTAttgtatattaattaatttcttcATAATTTTCT GGACTTCAAAGATCAAAATTATTTGGTTCTTATTATGTCAAGTTGTCTCA CAAGGCATCTCAGCTTCTTTATTTCCTAGTGTATCACTATTCATATGTTA TTTGATGATATCATAAATTATAGGGACTAAAACCAAAAATCGGTAAATTT TCAGAGACCAAAAACATTTCTAAACCTATAATTTAATATGTGGGAAGTTT TTTAAAGAAAGGAACACTATGTTTTAAGTGGGGATAGGCATTATTAAACC TTGATGCTTTATTGTAGAATCTTAGTgggaatatttttaaaattagacAA AATTATTCTAACAGACAAATAGAAAAGATAAACTTAAAGTGAAGGGTTGG AGTTTATTCTGTAAGTTGAAAATACTATCAACCAATACCGATATTTATCA GTGAAGTGCATTTTCAGATTTATATGCTTCTTCGGAGAGGACTATAGTGC CAAATTATCTTTCGTAGGGATGTTCAATTGCCAAATCTTTGGTTTTAGGC ATTTTGAAGCATTACAAATAATATTCTTGTTGTTTCAGATGATGCTAATT ATTCTATTTGAGTTGTAATTGGAATTAAATCCAACTCACTTTATGACTTG CATGCATTCTTATTGTTGAAGGTCTACCTCGATGAGAGTGTTCAAGAAGT GGATAGCCTTAATTCTACAATTCAGGAACTTGATGCTCAATTATGCAAAG AGAAGGAGGAGTGTAGAAGGTATAGGAACGTTACAACATCTACTTGTTGA TGATGTGTTGTTATCCCTTTCCATTTATCCATtttcaatgcatacatttt gctaatgatgttatttttccttgattttatttttcctttgttataATTGG AAAATTTAGAATTACTTCAAGAATAAGGCAGTTCATTAGAGTGCACCATC ATAATTCCCAGTTACAAGATGAACTGCAGAGGCAAGTTACATTTAGTTTT GTGTTCGTAGTATGCATTTATTTCTTATGttctttgttttcttgaattta ttattgttaatttatttttggggGATTGTTATTGTATCCAATTTGTAGAT CACAGGTCCGACTTCAAAGGTTTGGAGATGAACTTGTCTCTGACATTTCT AGAATTGGTGCCAGTGAAGAAGATTTAAGCATTGATATTGTAAGCAATGG TGAGAATCCGGCTCTTCCTCTGGCCATCAAACATAATGTGGATCAGAATG ATGCATCTCCCCACAGGAAAAGGCTGCATGTTAAACAAGATGCTGTGGAA GAGTTGAAACAAGGTAGTAGTTATGAAAAGTACTGTGAGAAATTGGTAAA TGTTTCCATCTCCCAGAACCAGAAATACTGTGACCTTTGCTAAGCAGAAC AGGGGAGAGTATCAAAACTCAATTTGTTTCATCTATCTGTGGGAACCATG TTTAGACAAACCTATAATTTAGCAAATATCTTTGCATCCTTTTTTATCTG GTAAGGAATAATTCAGAGTCGTCATTTAAGGGCTTATGTTTAGTAACTCG GATGGTCTGGACCACAGGCATTTGAGGGTGTTGTTATTCTGCGGTCAAGA ATAAATGGACATGTTTGAACTTTTAACTAATCTTTCATGCTTGTTTGCTG TTAATATTCAATTACAACATTGATTACAGAGTATCCTCTCTCAGTTTGTA TTGCAGTTGGtgataaatattaatgttttgcTGCCCTTGCACTAAATTCT GCTTTTCATCTGGCCTCTACACTTTCTTTTTATGCTGACTTCTCCATTAA CATGTGTGCAGATAGATCGAAAATTGGGAATTTGGTTGGAACATCAAGAA CCAGGAAGCGGTCTCGTTGGAATTTGCCTGCTCAGTTGAATGACAAGGAT GAAGAGAACATTGATGTCCCCCCAAACACTGGAACTGAAGTTACTAGGAC CGTCAATTATGAAGGGAAGCACAAGAGAGGAATATGTAATTCTTCTAACA ACCTAATTTCAGAAAAGGTTCAAGTTCACTTCATTTCATGATAACTCTAC CCCTGCTGGAATTCTATGACATAATGCATAATTGGTTTGTTGCATTCTTC ATGGTTCCGTCTGCATGATgccctttctttttgtttcattCATACTTAAG CATCGGTATATCTTGTGTCTTAAATAAGATTTTGAAAAGTTGCACATTGT CATTGCAAATGatcttttcctttcttaacCATCAATGTGCAGTTTAAGGA ATCTAGGATTGAAGTGCCACCAACCAGCATGGCAGCTCATGTGATTGATG AGGAAATTGAGATTGAACTTAATGACAGAACTGATATCACTGAAACTGTA AAAACCCAAAATGAGAATGGAGTGGCACATGAGGCAAAGAGCCTACTGCT TATGCTTCGCCCACCTTTGATTCCTCGTACTAATTATTCGCGGGTCAGTT CTTCCTCTTGGGTACACTTTTATTTCGCAGCATACTATCCCATTTACTTA TGTTACTCCTGTAGACTTCTGTTCTATAGAGTAGATACCACACTTTCATT GCCGTTGTGGTTTCATACTTTCATTCATTTcccataaatataattactGC CTTGTAAGTTAGACATTTTGTTGTAGGCATAGCTGAAGCAATTTAATTTC TGTGCAGTATGAAGGTGatgacgagaatgtggatgtgGATGGTCTTGACG AAGAGGATGCAGGAGCACATGTGGATATAGTCTAA back to topprotein sequence of rna-TanjilR_07207_La_Tanjil_v1.0 >rna-TanjilR_07207_La_Tanjil_v1.0 ID=rna-TanjilR_07207_La_Tanjil_v1.0; Name=rna-TanjilR_07207_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=452bp MVERKQFKTRLCVLYQKGRCNRNNCSFAHGNVELRRFSASSSEGEPQLIV RLPLSDQEVTGSNLENILSACKGRREYSGNDLRDKLDRRHLSPPRRYSPA RDGRGGQATHGYSPSRSSEKKSDRRHIRKQGTTGQHDNPGSLNFSDRIQD QVRGKLFTSGSRNTLDEQLKKVESDINTLQNQKFQLEVYLDESVQEVDSL NSTIQELDAQLCKEKEECRRSQVRLQRFGDELVSDISRIGASEEDLSIDI VSNGENPALPLAIKHNVDQNDASPHRKRLHVKQDAVEELKQDRSKIGNLV GTSRTRKRSRWNLPAQLNDKDEENIDVPPNTGTEVTRTVNYEGKHKRGIC NSSNNLISEKFKESRIEVPPTSMAAHVIDEEIEIELNDRTDITETVKTQN ENGVAHEAKSLLLMLRPPLIPRTNYSRYEGDDENVDVDGLDEEDAGAHVD IV back to topmRNA from alignment at Chr_LG08-CM007368.1:22373139..22381123+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna-TanjilR_07207_La_Tanjil_v1.0 ID=rna-TanjilR_07207_La_Tanjil_v1.0; Name=rna-TanjilR_07207; organism=Lupinus angustifolius; type=mRNA; length=7985bp; location=Sequence derived from: Chr_LG08-CM007368.1:22373139..22381123+ (Lupinus angustifolius ATGGTTGAACGAAAGCAATTCAAGACGAGGTTATGTGTGCTCTACCAGAA
AGGTCGATGTAACCGAAATAACTGCTCCTTTGCGCATGGGAACGTCGAGC
TGCGACGATTCTCTGCCTCATCTAGTGGTAATTTTTTAGCTTTGAATTGT
TTGCTTCATTCTATATCTTGCGGGTTGAGGtgaatgtgatttttaatgta
atatctatgttgTTAATTGAAGGATGATTATTGATGTATCAGGCACAACA
CTCTGTGTGATATTGTTACTTAGATTTTGGTTGACAGTGCATtagacaag
cgtgcagttgaTTAAGTTAAATGCTTTATTTGGATaatagtgtttttatt
ttagtagaACTAGCAGATTATCACTGAGGAAACCGCATAAAAGAGAAATA
AGCAATGTGCAAATTGGTACATTCACTTGCTGGTTAACATGCTACTATTT
CAATTACTCTTGGTTTTAAtgtagagaataaaatatgtcCTCATTTAAAG
GAGATACTTAAATCTATTAATTGTTTGACACATGttttatttcacttttt
ttttaaattattataaaataaagaattaGACACGTGTCAAACAGACAATA
AATTCAAGGAGATAAGTTATGTCAGGAAAtactcttgttttttttttccc
tCCTAGGAAACTTCCTCCAATAACTCCATCAGAGCAGActatctaatatt
tattttccagATCATTTCAGCTCCATCaaattttcttccttttgttttCA
CATTCTCTTTAGAGGGCGAGCCCCAACTCATTGTTAGGTTGCCTCTTAGT
GACCAAgaggtcacaggttcaaatcttgaaaatatCCTCTCTGCTTGCAA
GGGTAAGCCTACTTGCATCTATCCTCCCAGACCCCATTAGGTGAGAGTCT
CGTATATTGGGCCGCCCTTTTTGTTTTCACAttctttttgttgttataaT
TTCTTGTCTATTTCATTTCAtgcaattttatatcattaccATTGAACCTT
TTTTCTAATACTTCCTCCCTATGCCAATATCAAGCTGTATTTCTTTTATG
GAGTGTTGACTTCAAAAGATTGTTCCAGAATGAAACTTATACTCAAGTTT
GAAGTGCTAGCTGTTGCTTCTTGCAGATATATGCGGTTTGTTGGTGTCTT
TGGATTATTTGTGGTCCCTAGTTCTGTGTCTTTCTTTCTTTGTATCATGA
CTTGTACATTAGCCTATAACTATTATTCATGGGATATAAGGCTGTTTAAA
TGGAGGGGGGTCTGAGTTCTGTCGTATATTTGTGATAACGTGCTGAACTT
GAATGGGAAAATTCACTAATGATGAGAAGAAAAAGCATTGTATGATGATA
ATATACTGAAGGAGAAAAATGTgaggaaatatattatttacagaAGATGC
ATCTGAACTGTCATGGTATTTGCTGTAAACCCATTATTCACACCCCGGCT
TGTTTCATGAACACTATGTTATTCCATTTGTTTAGCTGGAATCCACGTCC
TTAAAAAACTGAGGATCAGGATACTTTTCTAATAGACTGGTCCATATGTG
CAGTTGGTTCTGTGTAAGAGCCCCAAGCTTAGATGTGCAATTACAAATAG
CATATGAGGTTAATGTCTGATTAATTTATTCAATGATAGAACTTCTGGTC
ACATTATCATGTCGAGACTAATGCATTTCCAGCAGTATGGGTATTCGATT
TTAGTTGAAAGATTCTTCAGAATGGATTGTGCTGTTTGGTATTGTTGAAG
GCATTATTTTTTCCATGGCAACCATTTTATGCTTCATTCAATAAATCTAT
GGTACTGCAGTTTTTCCTGAAGGATCATGATTGTGCTTATGTGGCTATGT
CGGCTGGCATCATATTTTGATCTGGAGCAAGTTCCGCGAATTTCTTAATC
ATTTAATGTACAAATGTACTGCTTGAGTGTATGGaccttattttattaat
tgattgataCTTCTGGATAAGATGTGGCTACTTGGACAAAGGCACGTGGA
GTTGTTAGTGGAGAATATATCATGAGAAACCAAATCTGATAGCATGTGGA
TggatttttatttcttatgtaTCTTGGAAATATCTCTACATTTGAGATTG
TATTTTATATCTTACTGCTCAACAATATGAGGACGTGAACTGTTCGTAAT
CTATTGCTACCTTGATTACACGATAAAAGCTGTGGATTTTTATATATGTC
ATAATATGAGGGCACTAGTTTCTATCGTCCTTTTGGCATAACATGGGAGG
CACTATTACTATTCATTAATATGTTTCTCTTGTTATTCTGGTTAATGGTA
AGCTTgatcttattgttgttgtttgtatCTTCAGAATGTGCTGATTTTAA
TTGTAGTCAGTAATGATGTACCTTATTTTCTTATTGCAGGGAGGAGAGAA
TATTCAGGTAATGACTTGAGGGATAAACTTGACAGAAGGCATTTATCACC
TCCTCGAAGGTACTCACCAGCTAGAGATGGAAGAGGCGGCCAGGCTACTC
ATGGTCAGACACATCATCTTATATTTCTGATTGCTCTTgtttataattat
catttttttagtttagtGTATAATTGAGGTGCAACTTCACTATCACTTAT
ATGAATAGATTATATTTCCGTGATAGCAGTTTTACATATTGACATTATTT
GAGATGGATGCTTTGGTTGTGTGTCATATAACCATTTCCTAGATTTTAAC
AGATCTTTAAGCAAGAGACTGACAGAGACAtcatttctctctcattttGT
CTTGCATTTTCTGTATGCTATAAAGAATTTTCTCTCCTACCTGCATAATT
ACGCACCTATTTACCTGTGCATAAATGGAAGTTCgcatttatatattttg
gttttatttcttCATGTACATGATCGTTTACCTTTCTGCTTATATACAAT
CTCACACGCTCATACTGTTTAACTTAATGAAATtccctttctctcttttc
taatgcCCCATCTTCCATGATTTAAAAATTGCAGGGTACAGTCCGTCAAG
GTCCTCAGAGAAAAAAAGGTAAATAGGCATGACACAGAATCACTATCGAT
AGtcatgtttatatttatattgccATTGTTGTCTACCTTTTTTGATATAA
ATTGTTGATGCTATAACGTGGATGTACACTTAGATATGCTTTATTAGAGA
GTGGAAATGGTGAAATTCATAATTATACTTAGAAATTATATCTTGATAGT
GATTGGCATTGATTGGGAGAGTGTCATCGACATGGTGGTAGTGgaagaaa
acaaagaaggaTCAAAAGTATTTTCAAAAGGAAGCAAATcattaacaaca
aaaattttACCCCCACGATGCACATTAGCATTACATATATAATTCTCACT
ACATAATGCAAAACCTTTTTTTTCTGTAGAAAAGATAAAATTCCATTACC
ACAAACAAATTTACATCAAAACGGAAGAAAAATTACGTGAGAGGAGAGCT
ACCTTCTATGAAGGGTTCCCTCCAAGACACATAATCCCAAAGAAAAAGCA
TGTTATCCTATATCCAGAAAGTACCAGACTGCAGGTGTGGCTTAGTTAGC
GGCGCAGATCAATTAGAACCAAATTAATCTATGGTTCCTTTTAGAGAGAG
GCATTTTGAACGGGACTCTGCTGCTTCATATCAGTTGTCCTTGATAGGAA
ccaaccaaataaagaaagaatTGGCAGAGAATTTAGGGAAACAAGTGCAG
AATGTATTTACTGATAGTAGAAAAAGAAAAGTGCAGAGTATAAGGTACAG
AAATGACTTATTAGTGTGATGACAGAAACACAATACAAGAGGAATAATTT
CCTTCTCCCAGTGACACAGTCACCCCCTAATTCCCCCAAATGATTGCCTG
CCTTATTCGTACTCCTCTCTGTCCTCATATTCACCTTCTTACTCTGATTC
TAGGATCTTCCTAACCAACCAACTCCTGCCACGTGTCTGGTTAGTTAGAG
TCATGTGTCACAAGCccctttttcttccttttccggTATACCCttactct
ctttctttcttctctgaAATACCCTCCTAATTGGAGGCCTAACAACCCTC
AAGCAGCCTTTCACATCTTATTTTAAACTTTTCgcattttgaaaaatatg
aacATATGTAAGGAAGACATTGGACAACTGTCcttaaaaaatatgaacat
CCATAAGATGAAGAAGCACAATGCTTCCTTTTCAAGTTTGGtttgaaaat
agaaataaaaaagcTTTAATGAAATGCTATGTTGCAACTTCTATTATAGG
ATAAAAAAGAATCAGTGAAATAGATTATTCCAGTTATTAGGGAAAGAAGT
TATGGCACTACTTTTTTATAAGCAATTATGATTACAACTAAAAACACAAA
AGGTGTAAATATTTAAGTATAAGAAGTAtctttaaaaaagtaacaaCAAC
CGAGCCTTTAACCCCACAGGTGGAGTTGGCTACTAGGATCGAACGATGCC
GTAAATCATGTTCATctttgaaaaagtaaagaaatatatttttttaataa
ttgtatagTGAACCAAAGAATTCTACCCCTTATGCATTGCATCTGTTTTT
TAGTAACCTATCCCAGACCCGTTCCCACAGCACATATCCGGACGTACTGT
GTTCCTAGTTGAGCATGGCAGGCTTATAGTTTAAAGGtgtgtttttaata
attagaGGTACAGGGTTAGTGAGGATTAACATTTGATGCCAAGAAACTTA
TTTAGGGAACTagttatatcaaaattatgttttcacTCTTCAGCCACCTA
ATGACTGGAATGTGCTTATGTGCCTCCCTTGGGCCAAATCTTCCATTTGT
TTGTctagtattttattttgtttcagaTCCTTAATATTAGTCTAAATATC
AGTAATTACTATCGCAGTGACAGAAGGCATATAAGGAAGCAAGGAACTAC
CGGCCAACATGATAATCCTGGAAGTTTAAACTTCTCGGATAGAATTCAAG
ATCAAGTTAGGGGCAAATTGTTTACCTCTGGTTCTAGAAATACGCTTGAT
GAGCAGGTTTGGAAATTCTGTTTAACCCTTCCATCGTTCATATGTATAAG
ATATTCCCTTGTTCATTCTGTGAaaattgtatttgttttggTAATGTGTG
CAGCTGAAGAAAGTAGAGTCAGATATCAACACTCTTCAGAACCAAAAATT
CCAACTAGAGGTTGGTTTTCATCTCTCGGAGATGTAGTtacattttatca
ttatttctaAGCGTTCTCTGtgcattttttgtttctttgctTTGACACCT
AGAAGTATTGGTTATGTAttgtatattaattaatttcttcATAATTTTCT
GGACTTCAAAGATCAAAATTATTTGGTTCTTATTATGTCAAGTTGTCTCA
CAAGGCATCTCAGCTTCTTTATTTCCTAGTGTATCACTATTCATATGTTA
TTTGATGATATCATAAATTATAGGGACTAAAACCAAAAATCGGTAAATTT
TCAGAGACCAAAAACATTTCTAAACCTATAATTTAATATGTGGGAAGTTT
TTTAAAGAAAGGAACACTATGTTTTAAGTGGGGATAGGCATTATTAAACC
TTGATGCTTTATTGTAGAATCTTAGTgggaatatttttaaaattagacAA
AATTATTCTAACAGACAAATAGAAAAGATAAACTTAAAGTGAAGGGTTGG
AGTTTATTCTGTAAGTTGAAAATACTATCAACCAATACCGATATTTATCA
GTGAAGTGCATTTTCAGATTTATATGCTTCTTCGGAGAGGACTATAGTGC
CAAATTATCTTTCGTAGGGATGTTCAATTGCCAAATCTTTGGTTTTAGGC
ATTTTGAAGCATTACAAATAATATTCTTGTTGTTTCAGATGATGCTAATT
ATTCTATTTGAGTTGTAATTGGAATTAAATCCAACTCACTTTATGACTTG
CATGCATTCTTATTGTTGAAGGTCTACCTCGATGAGAGTGTTCAAGAAGT
GGATAGCCTTAATTCTACAATTCAGGAACTTGATGCTCAATTATGCAAAG
AGAAGGAGGAGTGTAGAAGGTATAGGAACGTTACAACATCTACTTGTTGA
TGATGTGTTGTTATCCCTTTCCATTTATCCATtttcaatgcatacatttt
gctaatgatgttatttttccttgattttatttttcctttgttataATTGG
AAAATTTAGAATTACTTCAAGAATAAGGCAGTTCATTAGAGTGCACCATC
ATAATTCCCAGTTACAAGATGAACTGCAGAGGCAAGTTACATTTAGTTTT
GTGTTCGTAGTATGCATTTATTTCTTATGttctttgttttcttgaattta
ttattgttaatttatttttggggGATTGTTATTGTATCCAATTTGTAGAT
CACAGGTCCGACTTCAAAGGTTTGGAGATGAACTTGTCTCTGACATTTCT
AGAATTGGTGCCAGTGAAGAAGATTTAAGCATTGATATTGTAAGCAATGG
TGAGAATCCGGCTCTTCCTCTGGCCATCAAACATAATGTGGATCAGAATG
ATGCATCTCCCCACAGGAAAAGGCTGCATGTTAAACAAGATGCTGTGGAA
GAGTTGAAACAAGGTAGTAGTTATGAAAAGTACTGTGAGAAATTGGTAAA
TGTTTCCATCTCCCAGAACCAGAAATACTGTGACCTTTGCTAAGCAGAAC
AGGGGAGAGTATCAAAACTCAATTTGTTTCATCTATCTGTGGGAACCATG
TTTAGACAAACCTATAATTTAGCAAATATCTTTGCATCCTTTTTTATCTG
GTAAGGAATAATTCAGAGTCGTCATTTAAGGGCTTATGTTTAGTAACTCG
GATGGTCTGGACCACAGGCATTTGAGGGTGTTGTTATTCTGCGGTCAAGA
ATAAATGGACATGTTTGAACTTTTAACTAATCTTTCATGCTTGTTTGCTG
TTAATATTCAATTACAACATTGATTACAGAGTATCCTCTCTCAGTTTGTA
TTGCAGTTGGtgataaatattaatgttttgcTGCCCTTGCACTAAATTCT
GCTTTTCATCTGGCCTCTACACTTTCTTTTTATGCTGACTTCTCCATTAA
CATGTGTGCAGATAGATCGAAAATTGGGAATTTGGTTGGAACATCAAGAA
CCAGGAAGCGGTCTCGTTGGAATTTGCCTGCTCAGTTGAATGACAAGGAT
GAAGAGAACATTGATGTCCCCCCAAACACTGGAACTGAAGTTACTAGGAC
CGTCAATTATGAAGGGAAGCACAAGAGAGGAATATGTAATTCTTCTAACA
ACCTAATTTCAGAAAAGGTTCAAGTTCACTTCATTTCATGATAACTCTAC
CCCTGCTGGAATTCTATGACATAATGCATAATTGGTTTGTTGCATTCTTC
ATGGTTCCGTCTGCATGATgccctttctttttgtttcattCATACTTAAG
CATCGGTATATCTTGTGTCTTAAATAAGATTTTGAAAAGTTGCACATTGT
CATTGCAAATGatcttttcctttcttaacCATCAATGTGCAGTTTAAGGA
ATCTAGGATTGAAGTGCCACCAACCAGCATGGCAGCTCATGTGATTGATG
AGGAAATTGAGATTGAACTTAATGACAGAACTGATATCACTGAAACTGTA
AAAACCCAAAATGAGAATGGAGTGGCACATGAGGCAAAGAGCCTACTGCT
TATGCTTCGCCCACCTTTGATTCCTCGTACTAATTATTCGCGGGTCAGTT
CTTCCTCTTGGGTACACTTTTATTTCGCAGCATACTATCCCATTTACTTA
TGTTACTCCTGTAGACTTCTGTTCTATAGAGTAGATACCACACTTTCATT
GCCGTTGTGGTTTCATACTTTCATTCATTTcccataaatataattactGC
CTTGTAAGTTAGACATTTTGTTGTAGGCATAGCTGAAGCAATTTAATTTC
TGTGCAGTATGAAGGTGatgacgagaatgtggatgtgGATGGTCTTGACG
AAGAGGATGCAGGAGCACATGTGGATATAGTCTAA back to topCoding sequence (CDS) from alignment at Chr_LG08-CM007368.1:22373139..22381123+ >rna-TanjilR_07207_La_Tanjil_v1.0 ID=rna-TanjilR_07207_La_Tanjil_v1.0; Name=rna-TanjilR_07207; organism=Lupinus angustifolius; type=CDS; length=1359bp; location=Sequence derived from: Chr_LG08-CM007368.1:22373139..22381123+ (Lupinus angustifolius ATGGTTGAACGAAAGCAATTCAAGACGAGGTTATGTGTGCTCTACCAGAA AGGTCGATGTAACCGAAATAACTGCTCCTTTGCGCATGGGAACGTCGAGC TGCGACGATTCTCTGCCTCATCTAGTGAGGGCGAGCCCCAACTCATTGTT AGGTTGCCTCTTAGTGACCAAgaggtcacaggttcaaatcttgaaaatat CCTCTCTGCTTGCAAGGGGAGGAGAGAATATTCAGGTAATGACTTGAGGG ATAAACTTGACAGAAGGCATTTATCACCTCCTCGAAGGTACTCACCAGCT AGAGATGGAAGAGGCGGCCAGGCTACTCATGGGTACAGTCCGTCAAGGTC CTCAGAGAAAAAAAGTGACAGAAGGCATATAAGGAAGCAAGGAACTACCG GCCAACATGATAATCCTGGAAGTTTAAACTTCTCGGATAGAATTCAAGAT CAAGTTAGGGGCAAATTGTTTACCTCTGGTTCTAGAAATACGCTTGATGA GCAGCTGAAGAAAGTAGAGTCAGATATCAACACTCTTCAGAACCAAAAAT TCCAACTAGAGGTCTACCTCGATGAGAGTGTTCAAGAAGTGGATAGCCTT AATTCTACAATTCAGGAACTTGATGCTCAATTATGCAAAGAGAAGGAGGA GTGTAGAAGATCACAGGTCCGACTTCAAAGGTTTGGAGATGAACTTGTCT CTGACATTTCTAGAATTGGTGCCAGTGAAGAAGATTTAAGCATTGATATT GTAAGCAATGGTGAGAATCCGGCTCTTCCTCTGGCCATCAAACATAATGT GGATCAGAATGATGCATCTCCCCACAGGAAAAGGCTGCATGTTAAACAAG ATGCTGTGGAAGAGTTGAAACAAGATAGATCGAAAATTGGGAATTTGGTT GGAACATCAAGAACCAGGAAGCGGTCTCGTTGGAATTTGCCTGCTCAGTT GAATGACAAGGATGAAGAGAACATTGATGTCCCCCCAAACACTGGAACTG AAGTTACTAGGACCGTCAATTATGAAGGGAAGCACAAGAGAGGAATATGT AATTCTTCTAACAACCTAATTTCAGAAAAGTTTAAGGAATCTAGGATTGA AGTGCCACCAACCAGCATGGCAGCTCATGTGATTGATGAGGAAATTGAGA TTGAACTTAATGACAGAACTGATATCACTGAAACTGTAAAAACCCAAAAT GAGAATGGAGTGGCACATGAGGCAAAGAGCCTACTGCTTATGCTTCGCCC ACCTTTGATTCCTCGTACTAATTATTCGCGGTATGAAGGTGatgacgaga atgtggatgtgGATGGTCTTGACGAAGAGGATGCAGGAGCACATGTGGAT ATAGTCTAA back to top
Annotated Terms
The
following terms have been associated with
this mRNA:
Vocabulary: INTERPRO
Term | Definition |
IPR000571 | Znf_CCCH |
Vocabulary: Molecular Function
Term | Definition |
GO:0046872 | metal ion binding |
|