LR48_mrnaVigan07g131900

Transcript Overview
NameLR48_mrnaVigan07g131900
Unique NameLR48_mrnaVigan07g131900_Va_Jingnong6_v1.1
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length786
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_7-CM003377.1supercontigChr_7-CM003377.1:15887683..15888468 -Vigna angularis Jingnong 6 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna angularis Jingnong 6 genome v1.12020-05-19
InterProScan: Vigna angularis Jingnong 6 genome v1.12020-05-21
BLAST: V. angularis Jingnong 6 genome v1.12020-05-21
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LR48_Vigan07g131900gene-LR48_Vigan07g131900_Va_Jingnong6_v1.1Vigna angularisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan07g131900LR48_mrnaVigan07g131900_Va_Jingnong6_v1.1-proteinVigna angularispolypeptide
LR48_mrnaVigan07g131900_Va_Jingnong6_v1.1LR48_mrnaVigan07g131900_Va_Jingnong6_v1.1Vigna angularispolypeptide


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan07g131900_Va_Jingnong6_v1.1-start_codon-Chr_7-CM003377.1_Va_Jingnong6_v1.1-1589992784:15888466..15888468LR48_mrnaVigan07g131900_Va_Jingnong6_v1.1-start_codon-Chr_7-CM003377.1_Va_Jingnong6_v1.1-1589992784:15888466..15888468Vigna angularisstart_codon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan07g131900_Va_Jingnong6_v1.1-CDS-Chr_7-CM003377.1_Va_Jingnong6_v1.1-1589992784:15887683..15888468LR48_mrnaVigan07g131900_Va_Jingnong6_v1.1-CDS-Chr_7-CM003377.1_Va_Jingnong6_v1.1-1589992784:15887683..15888468Vigna angularisCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan07g131900_Va_Jingnong6_v1.1-exon-Chr_7-CM003377.1_Va_Jingnong6_v1.1-1589992784:15887683..15888468LR48_mrnaVigan07g131900_Va_Jingnong6_v1.1-exon-Chr_7-CM003377.1_Va_Jingnong6_v1.1-1589992784:15887683..15888468Vigna angularisexon


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan07g131900_Va_Jingnong6_v1.1-stop_codon-Chr_7-CM003377.1_Va_Jingnong6_v1.1-1589992784:15887683..15887685LR48_mrnaVigan07g131900_Va_Jingnong6_v1.1-stop_codon-Chr_7-CM003377.1_Va_Jingnong6_v1.1-1589992784:15887683..15887685Vigna angularisstop_codon


Homology
BLAST of LR48_mrnaVigan07g131900 vs. DB:Swiss
Match: AHL17_ARATH (AT-hook motif nuclear-localized protein 17 OS=Arabidopsis thaliana OX=3702 GN=AHL17 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 8.454e-65
Identity = 144/230 (62.61%), Postives = 178/230 (77.39%), Query Frame = 1
Query:  124 TGDGATIEVVXXXXXXXXXXXXXXXXXLIITREPDPSMSPFILEIPGGNDVVDALARFSHRKNTSLCVLNGSGTVGNVTLRQPSVAPVG-TVTFHGRFDILSMSATFLLHATLPSASPST---FAVSLAGPQGQIXXXXXXXXXXXXXTVFIVAASFNNPSFHRLSSEDDAQNSSASGGGVGDAQSPPASTGGAESGQLP---AESC---MYSCHL-PSDVIWAPTARPP 780
            T D ++IEVVRRPRGRPPGSKNKPKPP+ +TR+ DP MSP+ILE+P GNDVV+A+ RF  RK+  +CVL+GSG+V NVTLRQPS A +G T+TFHG+FD+LS+SATFL      S SP     F VSLAGPQGQI+GG VAG L++AGTV+++AASFNNPS+HRL +E++ ++S  +G G  + QSPP S GG ESGQ+     ESC   MYSCH+  SDVIWAPTAR P
Sbjct:   46 TVDDSSIEVVRRPRGRPPGSKNKPKPPVFVTRDTDPPMSPYILEVPSGNDVVEAINRFCRRKSIGVCVLSGSGSVANVTLRQPSPAALGSTITFHGKFDLLSVSATFLPPPPRTSLSPPVSNFFTVSLAGPQGQIIGGFVAGPLISAGTVYVIAASFNNPSYHRLPAEEEQKHS--AGTGEREGQSPPVSGGGEESGQMAGSGGESCGVSMYSCHMGGSDVIWAPTARAP 273          
BLAST of LR48_mrnaVigan07g131900 vs. DB:Swiss
Match: AHL28_ARATH (AT-hook motif nuclear-localized protein 28 OS=Arabidopsis thaliana OX=3702 GN=AHL28 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.808e-46
Identity = 105/189 (55.56%), Postives = 127/189 (67.20%), Query Frame = 1
Query:  226 DPSMSPFILEIPGGNDVVDALARFSHRKNTSLCVLNGSGTVGNVTLRQPS-VAPVGTVTFHGRFDILSMSATFLLHATLPSASPST---FAVSLAGPQGQIXXXXXXXXXXXXXTVFIVAASFNNPSFHRLSSEDDAQNSSASGGGVGDAQSPPASTGGAESGQLPAESCMYSCHLPSDVIWAPTARPP 780
            DP MSP+ILE+P GNDVV+AL RF   K    CVL+GSG+V +VTLRQPS  AP  T+TFHG+FD+LS+SATFL      S SP     F VSLAGPQG+++GG VAG L+AAGTV+ VA SF NPS+HRL + ++ Q +SA   G  + QSPP S GG ES        MY     SDVIW P A+ P
Sbjct:   27 DPPMSPYILEVPSGNDVVEALNRFCRGKAIGFCVLSGSGSVADVTLRQPSPAAPGSTITFHGKFDLLSVSATFLPPLPPTSLSPPVSNFFTVSLAGPQGKVIGGFVAGPLVAAGTVYFVATSFKNPSYHRLPATEEEQRNSAE--GEEEGQSPPVSGGGGES--------MYVGG--SDVIWDPNAKAP 203          
BLAST of LR48_mrnaVigan07g131900 vs. DB:Swiss
Match: AHL22_ARATH (AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana OX=3702 GN=AHL22 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.969e-20
Identity = 78/216 (36.11%), Postives = 114/216 (52.78%), Query Frame = 1
Query:  205 LIITREPDPSMSPFILEIPGGNDVVDALARFSHRKNTSLCVLNGSGTVGNVTLRQPSVAPVG---TVTFHGRFDILSMSATFLLHATLPSASPSTFAVSLAGPQGQIXXXXXXXXXXXXXTVFIVAASFNNPSFHRLSSEDDAQNSSASGGGVGDAQSPPASTGGAESG-------------QLPAE-------SCMYSCHLPSDVIWAPTARPPF 783
            +IITR+   ++   ++E+  G DV++++  F+ R+   +CVL+G+G V NVT+RQP+  P G    V  HGRF+ILS+S +FL        + S   + LAG QGQ+VGG V G L+A+G V I+AASF N ++ RL  E+D Q    + G V +     A+ GG                 Q P         + M S  LP++  W  T RP F
Sbjct:  106 IIITRDSANALKSHVMEVANGCDVMESVTVFARRRQRGICVLSGNGAVTNVTIRQPASVPGGGSSVVNLHGRFEILSLSGSFLPPPA--PPAASGLTIYLAGGQGQVVGGSVVGPLMASGPVVIMAASFGNAAYERLPLEEDDQEEQ-TAGAVANNIDGNATMGGGTQTQTQTQQQQQQQLMQDPTSFIQGLPPNLMNSVQLPAEAYWG-TPRPSF 317          
BLAST of LR48_mrnaVigan07g131900 vs. DB:Swiss
Match: AHL26_ARATH (AT-hook motif nuclear-localized protein 26 OS=Arabidopsis thaliana OX=3702 GN=AHL26 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.031e-20
Identity = 61/139 (43.88%), Postives = 92/139 (66.19%), Query Frame = 1
Query:  205 LIITREPDPSMSPFILEIPGGNDVVDALARFSHRKNTSLCVLNGSGTVGNVTLRQPSVAPVGTVTFHGRFDILSMSATFLLHATLPSASPSTFAVSLAGPQGQIXXXXXXXXXXXXXTVFIVAASFNNPSFHRLSSEDD 621
            +IITR+   ++   ++EI  G D+VD +A F+ R+   +CV++G+G+V NVT+RQP   P   V+ HGRF+ILS+S +FL        + +  +V LAG QGQ+VGG V G LL +G V ++AASF+N ++ RL  E+D
Sbjct:  135 IIITRDSANALRTHVMEIGDGCDIVDCMATFARRRQRGVCVMSGTGSVTNVTIRQPGSPPGSVVSLHGRFEILSLSGSFLPPPA--PPAATGLSVYLAGGQGQVVGGSVVGPLLCSGPVVVMAASFSNAAYERLPLEED 271          
BLAST of LR48_mrnaVigan07g131900 vs. DB:Swiss
Match: AHL18_ARATH (AT-hook motif nuclear-localized protein 18 OS=Arabidopsis thaliana OX=3702 GN=AHL18 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.656e-20
Identity = 56/131 (42.75%), Postives = 81/131 (61.83%), Query Frame = 1
Query:  205 LIITREPDPSMSPFILEIPGGNDVVDALARFSHRKNTSLCVLNGSGTVGNVTLRQPSVAPVGTVTFHGRFDILSMSATFLLHATLPSASPSTFAVSLAGPQGQIXXXXXXXXXXXXXTVFIVAASFNNPSF 597
            +I+TR+   +    ++EI    DV+++LA F+ R+   +CVL G+G V NVT+RQP     G V+ HGRF+ILS+S +FL        + S   V LAG QGQ++GG V G L A+  V ++AASF N S+
Sbjct:   76 IIVTRDSANAFRCHVMEITNACDVMESLAVFARRRQRGVCVLTGNGAVTNVTVRQPG---GGVVSLHGRFEILSLSGSFL--PPPAPPAASGLKVYLAGGQGQVIGGSVVGPLTASSPVVVMAASFGNASY 201          
BLAST of LR48_mrnaVigan07g131900 vs. DB:Swiss
Match: AHL20_ARATH (AT-hook motif nuclear-localized protein 20 OS=Arabidopsis thaliana OX=3702 GN=AHL20 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 8.620e-20
Identity = 73/162 (45.06%), Postives = 101/162 (62.35%), Query Frame = 1
Query:  205 LIITREPDPSMSPFILEIPGGNDVVDALARFSHRKNTSLCVLNGSGTVGNVTLRQPSVAPVGTVTFHGRFDILSMSATFLLHATLPSASP---STFAVSLAGPQGQIXXXXXXXXXXXXXTVFIVAASFNNPSFHRL--SSEDDAQNSSASGGGVGDAQSPP 675
            + +TR+   ++   +LEI  G+DV D +A FS R+   +CVL+G+G+V NVTLRQ + AP G V+  GRF+ILS++  F     LP  SP   +   V LAG QGQ+VGG V G LLA G+V ++AA+F+N ++ RL    E+D   S    GG GD  SPP
Sbjct:   84 IFVTRDSPNALRSHVLEISDGSDVADTIAHFSRRRQRGVCVLSGTGSVANVTLRQ-AAAPGGVVSLQGRFEILSLTGAF-----LPGPSPPGSTGLTVYLAGVQGQVVGGSVVGPLLAIGSVMVIAATFSNATYERLPMEEEEDGGGSRQIHGG-GD--SPP 236          
BLAST of LR48_mrnaVigan07g131900 vs. DB:Swiss
Match: AHL23_ARATH (AT-hook motif nuclear-localized protein 23 OS=Arabidopsis thaliana OX=3702 GN=AHL23 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.245e-19
Identity = 66/139 (47.48%), Postives = 90/139 (64.75%), Query Frame = 1
Query:  205 LIITREPDPSMSPFILEIPGGNDVVDALARFSHRKNTSLCVLNGSGTVGNVTLRQPSVAPVGTVTFHGRFDILSMSATFLLHATLPSASPSTFAVSLAGPQGQIXXXXXXXXXXXXXTVFIVAASFNNPSFHRLSSEDD 621
            +IITRE   ++   ILE+  G DV D +A ++ R+   +CVL+GSGTV NV++RQPS A    VT  G F+ILS+S +FL     P A  ++  + LAG QGQ+VGG V G L AAG V ++AASF N ++ RL  E+D
Sbjct:   99 VIITRESANTLRAHILEVTNGCDVFDCVATYARRRQRGICVLSGSGTVTNVSIRQPSAAG-AVVTLQGTFEILSLSGSFLPPPAPPGA--TSLTIFLAGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLEED 234          
BLAST of LR48_mrnaVigan07g131900 vs. DB:Swiss
Match: AHL29_ARATH (AT-hook motif nuclear-localized protein 29 OS=Arabidopsis thaliana OX=3702 GN=AHL29 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.363e-18
Identity = 53/146 (36.30%), Postives = 87/146 (59.59%), Query Frame = 1
Query:  205 LIITREPDPSMSPFILEIPGGNDVVDALARFSHRKNTSLCVLNGSGTVGNVTLRQPSVAPV--------GTVTFHGRFDILSMSATFLLHATLPSASPSTFAVSLAGPQGQIXXXXXXXXXXXXXTVFIVAASFNNPSFHRLSSED 618
            +I+TR+    +   +LE+  G D+V+++  ++ R+   + +L+G+GTV NV+LRQP+            G V  HGRF+ILS++ T L             ++ L+G QGQ++GG+V   L+A+G V ++AASF+N +F RL  ED
Sbjct:   89 VIVTRDSPNVLRSHVLEVSSGADIVESVTTYARRRGRGVSILSGNGTVANVSLRQPATTAAHGANGGTGGVVALHGRFEILSLTGTVLPPPA--PPGSGGLSIFLSGVQGQVIGGNVVAPLVASGPVILMAASFSNATFERLPLED 232          
BLAST of LR48_mrnaVigan07g131900 vs. DB:Swiss
Match: AHL21_ARATH (AT-hook motif nuclear-localized protein 21 OS=Arabidopsis thaliana OX=3702 GN=AHL21 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.154e-17
Identity = 65/164 (39.63%), Postives = 100/164 (60.98%), Query Frame = 1
Query:  205 LIITREPDPSMSPFILEIPGGNDVVDALARFSHRKNTSLCVLNGSGTVGNVTLRQPSVAPVGTVTFHGRFDILSMSATFLLHATLPSASPSTFAVSLAGPQGQIXXXXXXXXXXXXXTVFIVAASFNNPSFHRLSSEDDAQN-------------SSASGGGVG 657
            +I+TRE   ++   ILE+  G DV + ++ ++ R+   +CVL+G+GTV NV++RQP+ A    VT  G F+ILS+S +FL     P A  ++  + LAG QGQ+VGG+V G L+AAG V ++AASF N ++ RL  ++  ++             S A+GGG G
Sbjct:   95 VIVTRESANTLRAHILEVGSGCDVFECISTYARRRQRGICVLSGTGTVTNVSIRQPTAAGA-VVTLRGTFEILSLSGSFLPPPAPPGA--TSLTIFLAGAQGQVVGGNVVGELMAAGPVMVMAASFTNVAYERLPLDEHEEHLQSGGGGGGGNMYSEATGGGGG 255          
BLAST of LR48_mrnaVigan07g131900 vs. DB:Swiss
Match: AHL24_ARATH (AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AHL24 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.345e-17
Identity = 61/141 (43.26%), Postives = 93/141 (65.96%), Query Frame = 1
Query:  205 LIITREPDPSMSPFILEIPGGNDVVDALARFSHRKNTSLCVLNGSGTVGNVTLRQPSV--APVGTVTFHGRFDILSMSATFLLHATLPSASPSTFAVSLAGPQGQIXXXXXXXXXXXXXTVFIVAASFNNPSFHRLSSEDD 621
            +IITR+   ++   ++EI  G D+V+++A F+ R+   +CV++G+G V NVT+RQP    +P   V+ HGRF+ILS+S +FL        + +  +V LAG QGQ+VGG V G LL AG V ++AASF+N ++ RL  E+D
Sbjct:  122 IIITRDSANALRTHVMEIGDGCDLVESVATFARRRQRGVCVMSGTGNVTNVTIRQPGSHPSPGSVVSLHGRFEILSLSGSFLPPPA--PPTATGLSVYLAGGQGQVVGGSVVGPLLCAGPVVVMAASFSNAAYERLPLEED 260          
The following BLAST results are available for this feature:
BLAST of LR48_mrnaVigan07g131900 vs. DB:Swiss
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1)
Total hits: 10
Match NameE-valueIdentityDescription
AHL17_ARATH8.454e-6562.61AT-hook motif nuclear-localized protein 17 OS=Arab... [more]
AHL28_ARATH1.808e-4655.56AT-hook motif nuclear-localized protein 28 OS=Arab... [more]
AHL22_ARATH2.969e-2036.11AT-hook motif nuclear-localized protein 22 OS=Arab... [more]
AHL26_ARATH3.031e-2043.88AT-hook motif nuclear-localized protein 26 OS=Arab... [more]
AHL18_ARATH6.656e-2042.75AT-hook motif nuclear-localized protein 18 OS=Arab... [more]
AHL20_ARATH8.620e-2045.06AT-hook motif nuclear-localized protein 20 OS=Arab... [more]
AHL23_ARATH4.245e-1947.48AT-hook motif nuclear-localized protein 23 OS=Arab... [more]
AHL29_ARATH3.363e-1836.30AT-hook motif nuclear-localized protein 29 OS=Arab... [more]
AHL21_ARATH2.154e-1739.63AT-hook motif nuclear-localized protein 21 OS=Arab... [more]
AHL24_ARATH2.345e-1743.26AT-hook motif nuclear-localized protein 24 OS=Arab... [more]
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InterPro
Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.1330.80coord: 81..210
e-value: 8.4E-9
score: 37.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 202..218
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 202..236
NoneNo IPR availableSUPERFAMILY117856AF0104/ALDC/Ptd012-likecoord: 78..206
IPR005175PPC domainPFAMPF03479DUF296coord: 81..196
e-value: 3.2E-25
score: 88.5
IPR005175PPC domainPROSITEPS51742PPCcoord: 76..215
score: 32.4
IPR005175PPC domainCDDcd11378DUF296coord: 81..194
e-value: 2.90681E-28
score: 102.279
IPR014476AT-hook motif nuclear-localized protein 15-29PIRSFPIRSF016021ESCAROLAcoord: 1..252
e-value: 8.0E-79
score: 262.5

Sequences
The following sequences are available for this feature:

mRNA sequence

>LR48_mrnaVigan07g131900_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan07g131900_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan07g131900; organism=Vigna angularis; type=mRNA; length=786bp
ATGTTCTCAAAACTTCATCCACAGCACCAACCGTTTCAGTTCTCTCGGGA
ATGTCAAACATCCGAGGAGGATGACAGCCGGAGTAACGGGGGACCCAACC
TCGCGGCCCAGAAGCCCGTCTCCACAGGGGATGGAGCTACAATTGAAGTA
GTGCGGAGGCCCAGGGGCCGCCCTCCGGGCTCCAAAAACAAGCCCAAGCC
GCCTCTTATTATTACCCGCGAGCCAGACCCCTCCATGAGCCCCTTCATTT
TAGAAATCCCCGGCGGAAACGACGTCGTGGATGCCCTAGCCCGGTTCAGC
CACAGAAAGAACACGAGCCTCTGTGTCCTCAACGGTTCGGGAACAGTCGG
TAACGTCACTCTCCGCCAACCCTCCGTCGCTCCCGTCGGCACTGTTACCT
TCCATGGCCGCTTCGACATCCTCTCCATGTCCGCCACCTTCCTCCTCCAC
GCAACCCTGCCGTCGGCCTCTCCCTCTACCTTCGCCGTCTCGCTCGCCGG
ACCGCAGGGGCAGATCGTCGGCGGACACGTCGCTGGAGGGCTGCTCGCTG
CTGGGACGGTGTTCATCGTCGCCGCGTCGTTCAACAACCCCTCCTTCCAC
CGGCTCTCGTCAGAGGACGACGCGCAGAATAGCTCCGCGTCCGGCGGCGG
TGTCGGCGATGCGCAATCGCCGCCTGCCTCTACTGGCGGCGCGGAGAGCG
GACAACTTCCGGCGGAGTCGTGTATGTACAGCTGTCACCTCCCTTCGGAT
GTGATTTGGGCTCCGACGGCCAGACCACCTTTCTGA
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protein sequence of LR48_mrnaVigan07g131900_Va_Jingnong6_v1.1

>LR48_mrnaVigan07g131900_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan07g131900_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan07g131900_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=261bp
MFSKLHPQHQPFQFSRECQTSEEDDSRSNGGPNLAAQKPVSTGDGATIEV
VRRPRGRPPGSKNKPKPPLIITREPDPSMSPFILEIPGGNDVVDALARFS
HRKNTSLCVLNGSGTVGNVTLRQPSVAPVGTVTFHGRFDILSMSATFLLH
ATLPSASPSTFAVSLAGPQGQIVGGHVAGGLLAAGTVFIVAASFNNPSFH
RLSSEDDAQNSSASGGGVGDAQSPPASTGGAESGQLPAESCMYSCHLPSD
VIWAPTARPPF
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mRNA from alignment at Chr_7-CM003377.1:15887683..15888468-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>LR48_mrnaVigan07g131900_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan07g131900_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan07g131900; organism=Vigna angularis; type=mRNA; length=786bp; location=Sequence derived from: Chr_7-CM003377.1:15887683..15888468- (Vigna angularis
ATGTTCTCAAAACTTCATCCACAGCACCAACCGTTTCAGTTCTCTCGGGA ATGTCAAACATCCGAGGAGGATGACAGCCGGAGTAACGGGGGACCCAACC TCGCGGCCCAGAAGCCCGTCTCCACAGGGGATGGAGCTACAATTGAAGTA GTGCGGAGGCCCAGGGGCCGCCCTCCGGGCTCCAAAAACAAGCCCAAGCC GCCTCTTATTATTACCCGCGAGCCAGACCCCTCCATGAGCCCCTTCATTT TAGAAATCCCCGGCGGAAACGACGTCGTGGATGCCCTAGCCCGGTTCAGC CACAGAAAGAACACGAGCCTCTGTGTCCTCAACGGTTCGGGAACAGTCGG TAACGTCACTCTCCGCCAACCCTCCGTCGCTCCCGTCGGCACTGTTACCT TCCATGGCCGCTTCGACATCCTCTCCATGTCCGCCACCTTCCTCCTCCAC GCAACCCTGCCGTCGGCCTCTCCCTCTACCTTCGCCGTCTCGCTCGCCGG ACCGCAGGGGCAGATCGTCGGCGGACACGTCGCTGGAGGGCTGCTCGCTG CTGGGACGGTGTTCATCGTCGCCGCGTCGTTCAACAACCCCTCCTTCCAC CGGCTCTCGTCAGAGGACGACGCGCAGAATAGCTCCGCGTCCGGCGGCGG TGTCGGCGATGCGCAATCGCCGCCTGCCTCTACTGGCGGCGCGGAGAGCG GACAACTTCCGGCGGAGTCGTGTATGTACAGCTGTCACCTCCCTTCGGAT GTGATTTGGGCTCCGACGGCCAGACCACCTTTCTGA
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Coding sequence (CDS) from alignment at Chr_7-CM003377.1:15887683..15888468-

>LR48_mrnaVigan07g131900_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan07g131900_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan07g131900; organism=Vigna angularis; type=CDS; length=786bp; location=Sequence derived from: Chr_7-CM003377.1:15887683..15888468- (Vigna angularis
ATGTTCTCAAAACTTCATCCACAGCACCAACCGTTTCAGTTCTCTCGGGA
ATGTCAAACATCCGAGGAGGATGACAGCCGGAGTAACGGGGGACCCAACC
TCGCGGCCCAGAAGCCCGTCTCCACAGGGGATGGAGCTACAATTGAAGTA
GTGCGGAGGCCCAGGGGCCGCCCTCCGGGCTCCAAAAACAAGCCCAAGCC
GCCTCTTATTATTACCCGCGAGCCAGACCCCTCCATGAGCCCCTTCATTT
TAGAAATCCCCGGCGGAAACGACGTCGTGGATGCCCTAGCCCGGTTCAGC
CACAGAAAGAACACGAGCCTCTGTGTCCTCAACGGTTCGGGAACAGTCGG
TAACGTCACTCTCCGCCAACCCTCCGTCGCTCCCGTCGGCACTGTTACCT
TCCATGGCCGCTTCGACATCCTCTCCATGTCCGCCACCTTCCTCCTCCAC
GCAACCCTGCCGTCGGCCTCTCCCTCTACCTTCGCCGTCTCGCTCGCCGG
ACCGCAGGGGCAGATCGTCGGCGGACACGTCGCTGGAGGGCTGCTCGCTG
CTGGGACGGTGTTCATCGTCGCCGCGTCGTTCAACAACCCCTCCTTCCAC
CGGCTCTCGTCAGAGGACGACGCGCAGAATAGCTCCGCGTCCGGCGGCGG
TGTCGGCGATGCGCAATCGCCGCCTGCCTCTACTGGCGGCGCGGAGAGCG
GACAACTTCCGGCGGAGTCGTGTATGTACAGCTGTCACCTCCCTTCGGAT
GTGATTTGGGCTCCGACGGCCAGACCACCTTTCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR005175PPC_dom
IPR014476AHL15-29
Vocabulary: Molecular Function
TermDefinition
GO:0003680minor groove of adenine-thymine-rich DNA binding