Vfaba.Tiffany.R1.3g010680.1

Transcript Overview


Name	Vfaba.Tiffany.R1.3g010680.1
Unique Name	Vfaba.Tiffany.R1.3g010680.1_tif_v1
Type	mRNA
Organism	Vicia faba (Faba bean)
Sequence length	300

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr3	chromosome	chr3:30457461..30458046 -	Vicia faba cv. Tiffany genome v1.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vicia faba cv. Tiffany genome v1.0	2023-05-02
InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins	2023-05-10
Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL	2023-05-10
Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot	2023-05-10
Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11	2023-05-10

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
tifzwsR298	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
cctifL0632	Cajanus cajan Asha genome v1.0	Cajanus cajan
crtifL363	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
pstifL579	Pisum sativum Cameor genome v1a	Pisum sativum
pstifL679	Pisum sativum Cameor genome v1a	Pisum sativum
tifvfhR222	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
antifL0277	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
antifL1051	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
tifvssR376	Vicia sativa cv. Studenica genome v1.0	Vicia sativa

Orthologs


Gene/Transcript	Assembly	Species
Psat6g108960.1	Pisum sativum Cameor genome v1a	Pisum sativum
rna-KK1_006216	Cajanus cajan Asha genome v1.0	Cajanus cajan
jg37261.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
rna-TanjilR_07716	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
Psat06G0347700-T1	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
Vfaba.Hedin2.R1.3g016480.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Vfaba.Tiffany.R1.3g010680	Vfaba.Tiffany.R1.3g010680_tif_v1	Vicia faba	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Vfaba.Tiffany.R1.3g010680.1_tif_v1-exon	Vfaba.Tiffany.R1.3g010680.1_tif_v1-exon-chr3_tif_v1:30457461..30457538	Vicia faba	exon
Vfaba.Tiffany.R1.3g010680.1_tif_v1-exon	Vfaba.Tiffany.R1.3g010680.1_tif_v1-exon-chr3_tif_v1:30457633..30457697	Vicia faba	exon
Vfaba.Tiffany.R1.3g010680.1_tif_v1-exon	Vfaba.Tiffany.R1.3g010680.1_tif_v1-exon-chr3_tif_v1:30457788..30457890	Vicia faba	exon
Vfaba.Tiffany.R1.3g010680.1_tif_v1-exon	Vfaba.Tiffany.R1.3g010680.1_tif_v1-exon-chr3_tif_v1:30457993..30458046	Vicia faba	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Vfaba.Tiffany.R1.3g010680.1_tif_v1-cds	Vfaba.Tiffany.R1.3g010680.1_tif_v1-cds-chr3_tif_v1:30457461..30457538	Vicia faba	CDS
Vfaba.Tiffany.R1.3g010680.1_tif_v1-cds	Vfaba.Tiffany.R1.3g010680.1_tif_v1-cds-chr3_tif_v1:30457633..30457697	Vicia faba	CDS
Vfaba.Tiffany.R1.3g010680.1_tif_v1-cds	Vfaba.Tiffany.R1.3g010680.1_tif_v1-cds-chr3_tif_v1:30457788..30457890	Vicia faba	CDS
Vfaba.Tiffany.R1.3g010680.1_tif_v1-cds	Vfaba.Tiffany.R1.3g010680.1_tif_v1-cds-chr3_tif_v1:30457993..30458046	Vicia faba	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
Vfaba.Tiffany.R1.3g010680.1_tif_v1	Vfaba.Tiffany.R1.3g010680.1_tif_v1	Vicia faba	polypeptide
Vfaba.Tiffany.R1.3g010680.1_tif_v1	Vfaba.Tiffany.R1.3g010680.1_tif_v1-protein	Vicia faba	polypeptide

Homology

[Close]

BLAST of Vfaba.Tiffany.R1.3g010680.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371HCL0|A0A371HCL0_MUCPR (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_16294 PE=4 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 7.692e-40
Identity = 72/98 (73.47%), Postives = 83/98 (84.69%), Query Frame = 0

Query:    1 MSSAQQSFSHGQTQGQTQAKAEEWVQSTKESASAAAQQAKASAGHAADRAHSAANTSGETAERNKEEAAGFLQQTGEQVKNMAHGAVETVKHTLGMDK 98
            M+SAQQ+F+ GQTQGQTQAKAEEW+QSTKESASAAA           D+A  A+NTSG+TAE+NK+EAAGFLQQTGEQVKNMA GAV++VKHTLGMDK
Sbjct:   86 MTSAQQNFNAGQTQGQTQAKAEEWIQSTKESASAAA-----------DKAQEASNTSGQTAEQNKDEAAGFLQQTGEQVKNMAQGAVDSVKHTLGMDK 172

[Close]

BLAST of Vfaba.Tiffany.R1.3g010680.1 vs. UniProtKB/TrEMBL
Match: tr|A0A396JKB2|A0A396JKB2_MEDTR (Putative malate dehydrogenase (Decarboxylating) OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr1g0168911 PE=4 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.615e-37
Identity = 77/130 (59.23%), Postives = 89/130 (68.46%), Query Frame = 0

Query:    1 MSSAQQSFSHGQTQGQTQAKAEEWVQSTKESASAAA-----------QQAKASAGHAADRAHSAANTSGET----------------------AERNKEEAAGFLQQTGEQVKNMAHGAVETVKHTLGMD 97
            MSSAQQ+F+ GQ+ GQTQAKAEEW+QSTK+SASAA+           Q AK SA  A+D AHSA+NT+G+T                      +ERNKEEAAGFLQQTGEQVKNMA GAVE+VKHTLGMD
Sbjct:    1 MSSAQQNFNQGQSHGQTQAKAEEWIQSTKDSASAASDRAHSAANTAGQTAKDSASAASDGAHSASNTTGQTARDSASAAADRANAAANTTGQESERNKEEAAGFLQQTGEQVKNMAQGAVESVKHTLGMD 130

[Close]

BLAST of Vfaba.Tiffany.R1.3g010680.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MYS1|A0A4D6MYS1_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG9g787 PE=4 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.955e-35
Identity = 67/98 (68.37%), Postives = 77/98 (78.57%), Query Frame = 0

Query:    1 MSSAQQSFSHGQTQGQTQAKAEEWVQSTKESASAAAQQAKASAGHAADRAHSAANTSGETAERNKEEAAGFLQQTGEQVKNMAHGAVETVKHTLGMDK 98
            M+SAQQSFS GQ +GQTQ +AE  VQSTKESASAA            D+ + AANTSG+TAE+NK+EAAGFLQQTGEQ+K MA GAVE+VKHTLGMDK
Sbjct:    1 MASAQQSFSAGQAEGQTQVQAENLVQSTKESASAAV-----------DKVNEAANTSGQTAEQNKDEAAGFLQQTGEQMKTMAQGAVESVKHTLGMDK 87

[Close]

BLAST of Vfaba.Tiffany.R1.3g010680.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y1F7|A0A1S2Y1F7_CICAR (late embryogenesis abundant protein 7 OS=Cicer arietinum OX=3827 GN=LOC101500434 PE=4 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.238e-34
Identity = 76/98 (77.55%), Postives = 83/98 (84.69%), Query Frame = 0

Query:    1 MSSAQQSFSHGQTQGQTQAKAEEWVQSTKESASAAAQQAKASAGHAADRAHSAANTSGETAERNKEEAAGFLQQTGEQVKNMAHGAVETVKHTLGMDK 98
            MSSAQQ+FS GQ+ GQTQAKAE+WVQSTKESASAAA            RAH+AANT+G+TAERNKEEAAGFLQQTGEQVKNMA GAVE+VKHTLGMDK
Sbjct:    1 MSSAQQNFSAGQSHGQTQAKAEDWVQSTKESASAAAD-----------RAHAAANTTGQTAERNKEEAAGFLQQTGEQVKNMAQGAVESVKHTLGMDK 87

[Close]

BLAST of Vfaba.Tiffany.R1.3g010680.1 vs. UniProtKB/TrEMBL
Match: tr|G7I791|G7I791_MEDTR (Late embryogenesis abundant protein group 3 protein OS=Medicago truncatula OX=3880 GN=MTR_1g045980 PE=4 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.148e-33
Identity = 72/125 (57.60%), Postives = 84/125 (67.20%), Query Frame = 0

Query:    6 QSFSHGQTQGQTQAKAEEWVQSTKESASAAA-----------QQAKASAGHAADRAHSAANTSGET----------------------AERNKEEAAGFLQQTGEQVKNMAHGAVETVKHTLGMD 97
            Q+F+ GQ+ GQTQAKAEEW+QSTK+SASAA+           Q AK SA  A+D AHSA+NT+G+T                      +ERNKEEAAGFLQQTGEQVKNMA GAVE+VKHTLGMD
Sbjct:   10 QNFNQGQSHGQTQAKAEEWIQSTKDSASAASDRAHSAANTAGQTAKDSASAASDGAHSASNTTGQTARDSASAAADRANAAANTTGQESERNKEEAAGFLQQTGEQVKNMAQGAVESVKHTLGMD 134

[Close]

BLAST of Vfaba.Tiffany.R1.3g010680.1 vs. UniProtKB/TrEMBL
Match: tr|I1LAN8|I1LAN8_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100794394 PE=4 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.676e-33
Identity = 68/99 (68.69%), Postives = 83/99 (83.84%), Query Frame = 0

Query:    1 MSSAQQSFSHGQTQGQTQAKAEEWVQSTKESASAAAQQAKASAGHAADRAHSAANTSGETAERNKEEAAGFLQQTGEQVKNMAHGAVETVKHTLGMDKK 99
            MSSAQQ+F+ GQTQGQTQ KAEE+VQSTKE+ASAA             +A++AANT+G+TA++NK+E+AGFLQQTGEQVKNMA GAV++VKHTLGMDKK
Sbjct:    1 MSSAQQNFNAGQTQGQTQVKAEEFVQSTKETASAATD-----------KANAAANTTGQTAQQNKDESAGFLQQTGEQVKNMAQGAVDSVKHTLGMDKK 88

[Close]

BLAST of Vfaba.Tiffany.R1.3g010680.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2QPW2|A0A0B2QPW2_GLYSO (Late embryogenesis abundant protein 1 OS=Glycine soja OX=3848 GN=D0Y65_026933 PE=4 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.676e-33
Identity = 68/99 (68.69%), Postives = 83/99 (83.84%), Query Frame = 0

Query:    1 MSSAQQSFSHGQTQGQTQAKAEEWVQSTKESASAAAQQAKASAGHAADRAHSAANTSGETAERNKEEAAGFLQQTGEQVKNMAHGAVETVKHTLGMDKK 99
            MSSAQQ+F+ GQTQGQTQ KAEE+VQSTKE+ASAA             +A++AANT+G+TA++NK+E+AGFLQQTGEQVKNMA GAV++VKHTLGMDKK
Sbjct:    1 MSSAQQNFNAGQTQGQTQVKAEEFVQSTKETASAATD-----------KANAAANTTGQTAQQNKDESAGFLQQTGEQVKNMAQGAVDSVKHTLGMDKK 88

[Close]

BLAST of Vfaba.Tiffany.R1.3g010680.1 vs. UniProtKB/TrEMBL
Match: tr|I3SLG5|I3SLG5_LOTJA (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.030e-33
Identity = 73/99 (73.74%), Postives = 84/99 (84.85%), Query Frame = 0

Query:    1 MSSAQQSFSHGQTQGQTQAKAEEWVQSTKESASAAAQQAKASAGHAADRAHSAANTSGETAERNKEEAAGFLQQTGEQVKNMAHGAVETVKHTLGMDKK 99
            MSSAQQ+F+ GQ +GQTQAKAE+W+QSTKESASAAA            RAH+AANT+G+TAE+NKEEAAGF+QQTGEQVKNMA GAVE+VKHTLGMDKK
Sbjct:    1 MSSAQQNFNAGQNRGQTQAKAEDWMQSTKESASAAAD-----------RAHAAANTTGQTAEQNKEEAAGFIQQTGEQVKNMAQGAVESVKHTLGMDKK 88

[Close]

BLAST of Vfaba.Tiffany.R1.3g010680.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3STN9|A0A0S3STN9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G301500 PE=4 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.142e-32
Identity = 73/99 (73.74%), Postives = 82/99 (82.83%), Query Frame = 0

Query:    1 MSSAQQSFSHGQTQGQTQAKAEEWVQSTKESASAAAQQAKASAGHAADRAHSAANTSGETAERNKEEAAGFLQQTGEQVKNMAHGAVETVKHTLGMDKK 99
            MSS QQ+FS GQTQGQTQAKAE  VQSTKES SAAA           D+A++AANTSG+TAE+NKEEAAGFLQQTGEQ+KNMA GAV++VKHTLGMDKK
Sbjct:    1 MSSTQQNFSAGQTQGQTQAKAENLVQSTKESVSAAA-----------DKANAAANTSGQTAEQNKEEAAGFLQQTGEQMKNMAQGAVDSVKHTLGMDKK 88

[Close]

BLAST of Vfaba.Tiffany.R1.3g010680.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TVJ2|A0A0L9TVJ2_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan02g063600 PE=4 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.142e-32
Identity = 73/99 (73.74%), Postives = 82/99 (82.83%), Query Frame = 0

Query:    1 MSSAQQSFSHGQTQGQTQAKAEEWVQSTKESASAAAQQAKASAGHAADRAHSAANTSGETAERNKEEAAGFLQQTGEQVKNMAHGAVETVKHTLGMDKK 99
            MSS QQ+FS GQTQGQTQAKAE  VQSTKES SAAA           D+A++AANTSG+TAE+NKEEAAGFLQQTGEQ+KNMA GAV++VKHTLGMDKK
Sbjct:    1 MSSTQQNFSAGQTQGQTQAKAENLVQSTKESVSAAA-----------DKANAAANTSGQTAEQNKEEAAGFLQQTGEQMKNMAQGAVDSVKHTLGMDKK 88

[Close]

BLAST of Vfaba.Tiffany.R1.3g010680.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q96270|LEA7_ARATH (Late embryogenesis abundant protein 7 OS=Arabidopsis thaliana OX=3702 GN=LEA7 PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 3.702e-12
Identity = 42/94 (44.68%), Postives = 51/94 (54.26%), Query Frame = 0

Query:   18 QAKAEEWVQSTKESASAAAQQAKASAGHAADR---------------AHSAANTSGETAERNKEEAAGFLQQTGEQVKNMAHGAVETVKHTLGM 96
            Q KA E  QS K+  S AAQ  +  A  + D+               AH AA  + ETAE  KE+ +G L QTGEQVK MA GA + VKHTLG+
Sbjct:   48 QQKAHETAQSAKDKTSQAAQTTQERAQESKDKTGSYMSETGEAIKNKAHDAAEYTKETAEAGKEKTSGILGQTGEQVKQMAMGATDAVKHTLGL 141

[Close]

BLAST of Vfaba.Tiffany.R1.3g010680.1 vs. UniProtKB/Swiss-Prot
Match: sp|P13934|LEA76_BRANA (Late embryogenesis abundant protein 76 OS=Brassica napus OX=3708 PE=2 SV=2)

HSP 1 Score: 59.6918 bits (143), Expect = 9.220e-11
Identity = 43/106 (40.57%), Postives = 51/106 (48.11%), Query Frame = 0

Query:   17 TQAKAEEWVQSTKESASAAAQQAKASAGHAADR--------------------------AHSAANTSGETAERNKEEAAGFLQQTGEQVKNMAHGAVETVKHTLGM 96
            TQ KA E  QS+KE  S AAQ A+  A    D+                          A +AA  + ETAE  K++  GFL QTGE VK MA GA + VKHT GM
Sbjct:  112 TQQKAHETTQSSKEKTSQAAQTAQEKARETKDKTGSYLSETGEAVKQKAQDAAQYTKETAQNAAQYTKETAEAGKDKTGGFLSQTGEHVKQMAMGAADAVKHTFGM 217

[Close]

BLAST of Vfaba.Tiffany.R1.3g010680.1 vs. UniProtKB/Swiss-Prot
Match: sp|O49816|LEA1_CICAR (Late embryogenesis abundant protein 1 OS=Cicer arietinum OX=3827 PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 1.382e-10
Identity = 32/81 (39.51%), Postives = 50/81 (61.73%), Query Frame = 0

Query:   16 QTQAKAEEWVQSTKESASAAAQQAKASAGHAADRAHSAANTSGETAERNKEEAAGFLQQTGEQVKNMAHGAVETVKHTLGM 96
            +TQ  A+     T+++  A  ++A+ + G A ++      ++ ETA+  K+ +AGFLQQTGE+VK MA GA + VK T GM
Sbjct:   82 ETQQTAQAAKDKTQQTTEATKEKAQDTTGRAREKGSEMGQSTKETAQSGKDNSAGFLQQTGEKVKGMAQGATDAVKQTFGM 162

[Close]

BLAST of Vfaba.Tiffany.R1.3g010680.1 vs. UniProtKB/Swiss-Prot
Match: sp|O49817|LEA2_CICAR (Late embryogenesis abundant protein 2 OS=Cicer arietinum OX=3827 PE=2 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 6.789e-10
Identity = 31/81 (38.27%), Postives = 49/81 (60.49%), Query Frame = 0

Query:   16 QTQAKAEEWVQSTKESASAAAQQAKASAGHAADRAHSAANTSGETAERNKEEAAGFLQQTGEQVKNMAHGAVETVKHTLGM 96
            +TQ  A+     T+++  A  ++A+ + G A ++      ++ ETA+  K+ +AGFLQQTGE+ K MA GA + VK T GM
Sbjct:   60 KTQQTAQAAKDKTQQTTQATKEKAQDTTGRAKEKGSEMGQSTKETAQSGKDNSAGFLQQTGEKAKGMAQGATDAVKQTFGM 140

[Close]

BLAST of Vfaba.Tiffany.R1.3g010680.1 vs. Araport11
Match: AT4G13560.2 (| Late embryogenesis abundant protein (LEA) family protein | Chr4:7879764-7880311 REVERSE LENGTH=109 | 201606)

HSP 1 Score: 73.9442 bits (180), Expect = 2.084e-18
Identity = 44/107 (41.12%), Postives = 69/107 (64.49%), Query Frame = 0

Query:    4 AQQSFSHGQTQGQTQAKAEEWVQSTKESASAAA-------QQAKASAGH----AADRAHSAANTSGETAERNKEEAAGFLQQTGEQVKNMAHGAVETVKHTLGMDKK 99
            +QQ F+ GQ +GQ Q KAE+W +S K++A +A        Q A+  A      A D+    ++++ ++A+ N+E+AAG   QTGE VKNMA GA++ VK++LGM++K
Sbjct:    2 SQQQFNAGQNRGQAQEKAEQWTESAKQTAQSACDKTADLTQSARDKAADLTQSARDKTADGSHSANKSAQHNQEQAAGLFGQTGESVKNMAQGALDGVKNSLGMNEK 108

[Close]

BLAST of Vfaba.Tiffany.R1.3g010680.1 vs. Araport11
Match: AT4G13560.1 (| Late embryogenesis abundant protein (LEA) family protein | Chr4:7879764-7880311 REVERSE LENGTH=109 | 201606)

HSP 1 Score: 73.9442 bits (180), Expect = 2.084e-18
Identity = 44/107 (41.12%), Postives = 69/107 (64.49%), Query Frame = 0

Query:    4 AQQSFSHGQTQGQTQAKAEEWVQSTKESASAAA-------QQAKASAGH----AADRAHSAANTSGETAERNKEEAAGFLQQTGEQVKNMAHGAVETVKHTLGMDKK 99
            +QQ F+ GQ +GQ Q KAE+W +S K++A +A        Q A+  A      A D+    ++++ ++A+ N+E+AAG   QTGE VKNMA GA++ VK++LGM++K
Sbjct:    2 SQQQFNAGQNRGQAQEKAEQWTESAKQTAQSACDKTADLTQSARDKAADLTQSARDKTADGSHSANKSAQHNQEQAAGLFGQTGESVKNMAQGALDGVKNSLGMNEK 108

[Close]

BLAST of Vfaba.Tiffany.R1.3g010680.1 vs. Araport11
Match: AT1G52690.2 (| Late embryogenesis abundant protein (LEA) family protein | Chr1:19619842-19620589 FORWARD LENGTH=169 | 201606)

HSP 1 Score: 62.003 bits (149), Expect = 3.788e-13
Identity = 42/94 (44.68%), Postives = 51/94 (54.26%), Query Frame = 0

Query:   18 QAKAEEWVQSTKESASAAAQQAKASAGHAADR---------------AHSAANTSGETAERNKEEAAGFLQQTGEQVKNMAHGAVETVKHTLGM 96
            Q KA E  QS K+  S AAQ  +  A  + D+               AH AA  + ETAE  KE+ +G L QTGEQVK MA GA + VKHTLG+
Sbjct:   48 QQKAHETAQSAKDKTSQAAQTTQERAQESKDKTGSYMSETGEAIKNKAHDAAEYTKETAEAGKEKTSGILGQTGEQVKQMAMGATDAVKHTLGL 141

[Close]

BLAST of Vfaba.Tiffany.R1.3g010680.1 vs. Araport11
Match: AT1G52690.1 (| Late embryogenesis abundant protein (LEA) family protein | Chr1:19619842-19620589 FORWARD LENGTH=169 | 201606)

HSP 1 Score: 62.003 bits (149), Expect = 3.788e-13
Identity = 42/94 (44.68%), Postives = 51/94 (54.26%), Query Frame = 0

Query:   18 QAKAEEWVQSTKESASAAAQQAKASAGHAADR---------------AHSAANTSGETAERNKEEAAGFLQQTGEQVKNMAHGAVETVKHTLGM 96
            Q KA E  QS K+  S AAQ  +  A  + D+               AH AA  + ETAE  KE+ +G L QTGEQVK MA GA + VKHTLG+
Sbjct:   48 QQKAHETAQSAKDKTSQAAQTTQERAQESKDKTGSYMSETGEAIKNKAHDAAEYTKETAEAGKEKTSGILGQTGEQVKQMAMGATDAVKHTLGL 141

[Close]

BLAST of Vfaba.Tiffany.R1.3g010680.1 vs. Araport11
Match: AT3G15670.1 (| Late embryogenesis abundant protein (LEA) family protein | Chr3:5310141-5310901 REVERSE LENGTH=225 | 201606)

HSP 1 Score: 54.6842 bits (130), Expect = 4.643e-10
Identity = 34/77 (44.16%), Postives = 41/77 (53.25%), Query Frame = 0

Query:   20 KAEEWVQSTKESASAAAQQAKASAGHAADRAHSAANTSGETAERNKEEAAGFLQQTGEQVKNMAHGAVETVKHTLGM 96
            KA++  Q TKE+A  AAQ  K                  ETAE  +++  GFL QTGE VK MA GA + VKHT GM
Sbjct:  133 KAQDAAQYTKETAQGAAQYTK------------------ETAEAGRDKTGGFLSQTGEHVKQMAMGAADAVKHTFGM 191

[Close]

BLAST of Vfaba.Tiffany.R1.3g010680.1 vs. Araport11
Match: AT1G52680.1 (| late embryogenesis abundant protein-related / LEA protein-like protein | Chr1:19618419-19618961 REVERSE LENGTH=114 | 201606)

HSP 1 Score: 52.373 bits (124), Expect = 5.270e-10
Identity = 39/97 (40.21%), Postives = 54/97 (55.67%), Query Frame = 0

Query:    1 MSSAQQ-SFSHGQTQGQTQAKAEEWVQSTKESASAAAQQAKASAGHAADRAHSAANTSGETAERNKEEAAGFLQQTGEQVKNMAHGAVETVKHTLGM 96
            MSS+QQ S S G+  GQ Q K EE++     + S A  Q      H+  + HS  + +  +      +A+  +QQTG QVKNMA GA + VK+TLGM
Sbjct:    1 MSSSQQLSHSAGEVTGQVQLKKEEYL----NNVSHAMNQNADHHTHSQSQLHSEHDQNNPSL---ISQASSVIQQTGGQVKNMAQGAADAVKNTLGM 90

The following BLAST results are available for this feature:

BLAST of Vfaba.Tiffany.R1.3g010680.1 vs. UniProtKB/TrEMBL
BLAST of Vfaba.Tiffany.R1.3g010680.1 vs. UniProtKB/Swiss-Prot
BLAST of Vfaba.Tiffany.R1.3g010680.1 vs. Araport11

BLAST of Vfaba.Tiffany.R1.3g010680.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
tr\|A0A371HCL0\|A0A371HCL0_MUCPR	7.692e-40	73.47	Uncharacterized protein (Fragment) OS=Mucuna pruri...	[more]
tr\|A0A396JKB2\|A0A396JKB2_MEDTR	6.615e-37	59.23	Putative malate dehydrogenase (Decarboxylating) OS...	[more]
tr\|A0A4D6MYS1\|A0A4D6MYS1_VIGUN	1.955e-35	68.37	Uncharacterized protein OS=Vigna unguiculata OX=39...	[more]
tr\|A0A1S2Y1F7\|A0A1S2Y1F7_CICAR	2.238e-34	77.55	late embryogenesis abundant protein 7 OS=Cicer ari...	[more]
tr\|G7I791\|G7I791_MEDTR	1.148e-33	57.60	Late embryogenesis abundant protein group 3 protei...	[more]
tr\|I1LAN8\|I1LAN8_SOYBN	1.676e-33	68.69	Uncharacterized protein OS=Glycine max OX=3847 GN=...	[more]
tr\|A0A0B2QPW2\|A0A0B2QPW2_GLYSO	1.676e-33	68.69	Late embryogenesis abundant protein 1 OS=Glycine s...	[more]
tr\|I3SLG5\|I3SLG5_LOTJA	4.030e-33	73.74	Uncharacterized protein OS=Lotus japonicus OX=3430...	[more]
tr\|A0A0S3STN9\|A0A0S3STN9_PHAAN	1.142e-32	73.74	Uncharacterized protein OS=Vigna angularis var. an...	[more]
tr\|A0A0L9TVJ2\|A0A0L9TVJ2_PHAAN	1.142e-32	73.74	Uncharacterized protein OS=Phaseolus angularis OX=...	[more]

BLAST of Vfaba.Tiffany.R1.3g010680.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot)
Total hits: 4


Match Name	E-value	Identity	Description
sp\|Q96270\|LEA7_ARATH	3.702e-12	44.68	Late embryogenesis abundant protein 7 OS=Arabidops...	[more]
sp\|P13934\|LEA76_BRANA	9.220e-11	40.57	Late embryogenesis abundant protein 76 OS=Brassica...	[more]
sp\|O49816\|LEA1_CICAR	1.382e-10	39.51	Late embryogenesis abundant protein 1 OS=Cicer ari...	[more]
sp\|O49817\|LEA2_CICAR	6.789e-10	38.27	Late embryogenesis abundant protein 2 OS=Cicer ari...	[more]

BLAST of Vfaba.Tiffany.R1.3g010680.1 vs. Araport11
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11)
Total hits: 6


Match Name	E-value	Identity	Description
AT4G13560.2	2.084e-18	41.12	\| Late embryogenesis abundant protein (LEA) family...	[more]
AT4G13560.1	2.084e-18	41.12	\| Late embryogenesis abundant protein (LEA) family...	[more]
AT1G52690.2	3.788e-13	44.68	\| Late embryogenesis abundant protein (LEA) family...	[more]
AT1G52690.1	3.788e-13	44.68	\| Late embryogenesis abundant protein (LEA) family...	[more]
AT3G15670.1	4.643e-10	44.16	\| Late embryogenesis abundant protein (LEA) family...	[more]
AT1G52680.1	5.270e-10	40.21	\| late embryogenesis abundant protein-related / LE...	[more]

InterPro

Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..99
IPR039624	Late embryogenesis abundant protein 1/2/D7	PANTHER	PTHR34191	LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN	coord: 1..98

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr3:30457461..30458046-

mRNA sequence

>Vfaba.Tiffany.R1.3g010680.1_tif_v1 ID=Vfaba.Tiffany.R1.3g010680.1_tif_v1; Name=Vfaba.Tiffany.R1.3g010680.1; organism=Vicia faba; type=mRNA; length=300bp
ATGTCAAGTGCTCAACAAAGCTTCTCTCATGGCCAAACCCAAGGCCAGAC
TCAGGCTAAGGCAGAAGAATGGGTTCAATCCACCAAGGAATCTGCCTCTG
CAGCTGCCCAGCAGGCTAAGGCATCTGCTGGACACGCTGCAGACCGCGCT
CATTCAGCAGCTAACACATCAGGAGAGACTGCTGAAAGAAACAAAGAGGA
AGCTGCTGGTTTTCTCCAACAGACTGGAGAGCAAGTGAAGAACATGGCTC
ATGGTGCTGTGGAGACCGTGAAGCACACCCTTGGAATGGACAAGAAGTGA

protein sequence of Vfaba.Tiffany.R1.3g010680.1_tif_v1

>Vfaba.Tiffany.R1.3g010680.1_tif_v1 ID=Vfaba.Tiffany.R1.3g010680.1_tif_v1; Name=Vfaba.Tiffany.R1.3g010680.1_tif_v1; organism=Vicia faba; type=polypeptide; length=99bp
MSSAQQSFSHGQTQGQTQAKAEEWVQSTKESASAAAQQAKASAGHAADRA
HSAANTSGETAERNKEEAAGFLQQTGEQVKNMAHGAVETVKHTLGMDKK

mRNA from alignment at chr3:30457461..30458046-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>Vfaba.Tiffany.R1.3g010680.1_tif_v1 ID=Vfaba.Tiffany.R1.3g010680.1_tif_v1; Name=Vfaba.Tiffany.R1.3g010680.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr3:30457461..30458046- (Vicia faba

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR039624	LEA1/2/D7/KIN1/2

Search form

Vfaba.Tiffany.R1.3g010680.1