Vfaba.Hedin2.R1.5g116080.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.5g116080.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072UCX8|A0A072UCX8_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MTR_7g094270 PE=4 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 1.213e-72 Identity = 115/152 (75.66%), Postives = 131/152 (86.18%), Query Frame = 0 Query: 1 MGNKNSSNSKV-HAKTTKVSSIEQHVPKQNKMSFPTEQGHRIKGSTT---LRDDEYIGKHKIETPLDSDETFNNFIRSAKYKIRTVTMSKSNSYREQSNNAAPAAADYEVNIGDNSDKENHQRKQFDDFIQISKKKMRATSGIRNNSFLMKP 148 MGNKNSSNSKV + KTTKV S+EQHVP+Q M+FPT++GHRIKG+TT LRDDEYIGK K+ETPLD+DETFNNFI+ A YKIRTVTMSKSN REQ+NN APAA D+E N G+NS KEN+QR QFDDFIQI+KKKMRA+S IRNNSFL KP Sbjct: 1 MGNKNSSNSKVQYGKTTKVVSLEQHVPRQKLMNFPTKKGHRIKGNTTTATLRDDEYIGKSKLETPLDNDETFNNFIKRATYKIRTVTMSKSNIDREQNNNTAPAAPDHEAN-GNNSYKENYQRDQFDDFIQIAKKKMRASSSIRNNSFLKKP 151
BLAST of Vfaba.Hedin2.R1.5g116080.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3NPV1|A0A2K3NPV1_TRIPR (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g001504 PE=4 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 1.062e-63 Identity = 106/150 (70.67%), Postives = 121/150 (80.67%), Query Frame = 0 Query: 1 MGNKNSSNSKV-HAKTTKVSSIEQHVPKQNKMSFPTEQGHRIKGSTTLRDDEYIGKH-KIETPLDSDETFNNFIRSAKYKIRTVTMSKSNSYREQSNNAAPAAADYEVNIGDNSDKENHQRKQFDDFIQISKKKMRATSGIRNNSFLMKP 148 MGNK+SSNSKV + KTTKVSSIEQHVP+QN MSF EQ R K ++ DDEYIGKH K+ET LD+DETFNNFI+ AKYKIRTVTMSKSN +E SNN PAA D+E N +N+ KEN+QR QFDDFIQISKKKMRA+S IRN+SF KP Sbjct: 1 MGNKSSSNSKVQYGKTTKVSSIEQHVPRQNMMSFQKEQSQRNKATSLRDDDEYIGKHYKVETSLDNDETFNNFIKRAKYKIRTVTMSKSNIDKEHSNNTVPAAPDHEANGNNNTYKENNQRDQFDDFIQISKKKMRASSSIRNSSFFKKP 150
BLAST of Vfaba.Hedin2.R1.5g116080.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2SLU5|A0A0B2SLU5_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_051565 PE=4 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.445e-23 Identity = 66/147 (44.90%), Postives = 84/147 (57.14%), Query Frame = 0 Query: 1 MGNKNSSNSKVHAKTTKVSSIEQHVPKQNKMSFPTEQGHRIKGST-----TLRDDEYIGKHKIETPLDSDETFNNFIRSAKYKIRTVTMSKSNSYREQSNNAAPAAADYEVNIGDNSDKENHQRKQFDDFIQISKKKMRATSGIRNN 142 MGN +SSNSKVH + T+V+S E + +M + I ST TL+ G + TPLD+DETFN+FIR AKYKIRTV S+ RE SN A+ + D E N DN Q QF +FIQ +K K+RATS +R N Sbjct: 1 MGNTSSSNSKVHGQVTRVASTEHGYDHRMRMPVAKFRDEYIGKSTAEIRGTLKGQHGSGVYSDNTPLDNDETFNSFIRHAKYKIRTV----SHIGREHSNVASASLPDEEANARDN------QNDQFSNFIQSAKNKLRATSSMRKN 137
BLAST of Vfaba.Hedin2.R1.5g116080.1 vs. UniProtKB/TrEMBL
Match: tr|I1N9E5|I1N9E5_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=106797445 PE=4 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.374e-23 Identity = 66/147 (44.90%), Postives = 84/147 (57.14%), Query Frame = 0 Query: 1 MGNKNSSNSKVHAKTTKVSSIEQHVPKQNKMSFPTEQGHRIKGST-----TLRDDEYIGKHKIETPLDSDETFNNFIRSAKYKIRTVTMSKSNSYREQSNNAAPAAADYEVNIGDNSDKENHQRKQFDDFIQISKKKMRATSGIRNN 142 MGN +SSNSKVH + T+V+S E + +M + I ST TL+ G + TPLD+DETFN+FIR AKYKIRTV S+ RE SN A+ + D E N DN Q QF +FIQ +K K+RATS +R N Sbjct: 1 MGNTSSSNSKVHGQVTRVASTEPGYDPRMRMPVAKFRDEYIGKSTAEIRGTLKGQHGSGVYSDNTPLDNDETFNSFIRHAKYKIRTV----SHIGREHSNVASASLPDEEANARDN------QNDQFSNFIQSAKNKLRATSSMRKN 137
BLAST of Vfaba.Hedin2.R1.5g116080.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1J7H9X4|A0A1J7H9X4_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_19664 PE=4 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.708e-22 Identity = 69/156 (44.23%), Postives = 96/156 (61.54%), Query Frame = 0 Query: 1 MGNKNSSNSK---VHAKTTKVSSIE--QHVPKQNK-----MSFPTEQGH-RIKGSTTLRDDEYIGKH-KIETPLDSDETFNNFIRSAKYKIRTVTMSKSNSYREQSNNAAPAAAD-YEVNIGDNSDKENHQRKQFDDFIQISKKKMRATSGIRNNS 143 MGN+NS++SK + +K+ S E QHVP+ + FPT++G R+KG + +H K T LDSD+TF FIR AKYKIRT+ SN REQSN A +A D +N+ +NS+ EN Q+ QF DFI+++KKK++ TS + NNS Sbjct: 1 MGNRNSTSSKSKVYYGPRSKIGSSELTQHVPRTKAEPVVVVGFPTDEGSLRLKGHS---------EHGKKSTSLDSDDTFTEFIRRAKYKIRTI----SNIGREQSNIAPASALDGANINVTNNSNDEN-QKDQFGDFIKVAKKKLKTTSRVGNNS 142
BLAST of Vfaba.Hedin2.R1.5g116080.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A5PN06|A0A6A5PN06_LUPAL (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00019371 PE=4 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 4.983e-20 Identity = 70/156 (44.87%), Postives = 95/156 (60.90%), Query Frame = 0 Query: 1 MGNKNS--SNSKVH-AKTTKVSSIE--QHVPKQNK-----MSFPTEQGHRIKGSTTLRDDEYIGKH-KIETPLDSDETFNNFIRSAKYKIRTVTMSKSNSYREQSNNAAPAAA--DYEVNIGDNSDKENHQRKQFDDFIQISKKKMRATSGIRNNS 143 MGN+NS S SKVH +KV S E QHVP+ + FPT++G +LR E+ +H K LDSD+TF FIR AKYKIR++ SN REQSN APA+ +N+ +NS+ EN ++ QF DFI+++KKK++ TS + NNS Sbjct: 1 MGNRNSTSSKSKVHYGPRSKVVSSESAQHVPRTKAEPVVVVGFPTDEG-------SLRLKEHSEQHGKKSLSLDSDDTFTEFIRRAKYKIRSI----SNIGREQSN-FAPASTLEGANINVINNSNDEN-EKDQFADFIKVAKKKLKTTSRVGNNS 143
BLAST of Vfaba.Hedin2.R1.5g116080.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445FH01|A0A445FH01_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_051566 PE=4 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 7.490e-20 Identity = 71/160 (44.38%), Postives = 84/160 (52.50%), Query Frame = 0 Query: 1 MGNKNSSN-SKVHAKTTKVSSIEQHVPKQNKMSFPTEQGHRIKGSTTLRDDEYIGKHKIETP-----------------LDSDETFNNFIRSAKYKIRTVTMSKSNSYREQSNNAAPAAADYEVNIGDNSDKENHQRKQFDDFIQISKKKMRATSGIRNN 142 MGN+NSS+ SKVH + T+V+S E + G + T RD EYIGK K ETP LDSDETFN+FIR AK KIRTV S+ REQSN A YE N DN Q QF +FIQ +KKK+R TS +R N Sbjct: 1 MGNRNSSSKSKVHGQVTRVASSEPGY----DFDYDPIMGMPV---TKFRD-EYIGKSKGETPGKLKGTGMYSYQQGNAALDSDETFNSFIRRAKCKIRTV----SHIDREQSNVAPATPPVYEANAMDN------QNDQFSNFIQSTKKKLRTTSSMRKN 142
BLAST of Vfaba.Hedin2.R1.5g116080.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2QIY5|A0A0B2QIY5_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_033495 PE=4 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.873e-19 Identity = 69/165 (41.82%), Postives = 85/165 (51.52%), Query Frame = 0 Query: 1 MGNK-NSSNSKVHAKTTKVSSIEQHVPKQNKMSFPTEQGHRIKGSTTLRDDEYIGKHKIET-----------------PLDSDETFNNFIRSAKYKIRTVTMSKSNSYREQSNNAAPAAADYEVNIGDNSDKENHQRKQFDDFIQISKKKMRATSGIRNNSFLMK 147 MGN +SSNSKVH + T+V+S E M P + RD EYIGK K ET LD+DETFN+FIR AKYKI+TV S+ EQSN A+ + D E N K++ Q QF FIQ +KKK+RATS +R N K Sbjct: 1 MGNTTSSSNSKVHGQVTRVASTEPSYDPM--MGMPVAK---------FRD-EYIGKSKAETRGTLKGQHGTGVYSGNTALDNDETFNSFIRHAKYKIKTV----SHIDGEQSNVASSSLPDDEANA-----KDSRQNDQFSTFIQSAKKKLRATSSMRKNGSFFK 144
BLAST of Vfaba.Hedin2.R1.5g116080.1 vs. UniProtKB/TrEMBL
Match: tr|I1JNR2|I1JNR2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_03G150400 PE=4 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.873e-19 Identity = 69/165 (41.82%), Postives = 85/165 (51.52%), Query Frame = 0 Query: 1 MGNK-NSSNSKVHAKTTKVSSIEQHVPKQNKMSFPTEQGHRIKGSTTLRDDEYIGKHKIET-----------------PLDSDETFNNFIRSAKYKIRTVTMSKSNSYREQSNNAAPAAADYEVNIGDNSDKENHQRKQFDDFIQISKKKMRATSGIRNNSFLMK 147 MGN +SSNSKVH + T+V+S E M P + RD EYIGK K ET LD+DETFN+FIR AKYKI+TV S+ EQSN A+ + D E N K++ Q QF FIQ +KKK+RATS +R N K Sbjct: 1 MGNTTSSSNSKVHGQVTRVASTEPSYDPM--MGMPVAK---------FRD-EYIGKSKAETRGTLKGQHGTGVYSGNTALDNDETFNSFIRHAKYKIKTV----SHIDGEQSNVASSSLPDDEANA-----KDSRQNDQFSTFIQSAKKKLRATSSMRKNGSFFK 144
BLAST of Vfaba.Hedin2.R1.5g116080.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2QF12|A0A0B2QF12_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_033497 PE=4 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.499e-18 Identity = 66/164 (40.24%), Postives = 80/164 (48.78%), Query Frame = 0 Query: 1 MGNKNSSNSKVHAKTTKVSSIEQHVPKQNKMSFPTEQGHRIKGSTTLRDDEYIGKHKIETP-----------------LDSDETFNNFIRSAKYKIRTVTMSKSNSYREQSNNAAPAAADYEVNIGDNSDKENHQRKQFDDFIQISKKKMRATSGIRNNSFLMK 147 MGN+NSS SKVH + +++S + + P T RD E+IGK K ETP LDS+ETFN FIR AK KIRTV S+ REQS A YEVN DN Q QF +FI +KKK+R TS +R N K Sbjct: 1 MGNRNSSKSKVHGQVIRIASTKPGYDYDPTIGMPV---------TKFRD-EHIGKSKGETPGKLKGSGVYSYQQGNAPLDSNETFNTFIRRAKCKIRTV----SHINREQSYVAPAPPPVYEVNARDN------QNDQFSNFILSTKKKLRTTSSMRKNDSFFK 144 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.5g116080.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Hedin2.R1.5g116080.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 0
BLAST of Vfaba.Hedin2.R1.5g116080.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 0
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.5g116080.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g116080.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g116080.1; organism=Vicia faba; type=mRNA; length=447bpback to top protein sequence of Vfaba.Hedin2.R1.5g116080.1_vfh_v1 >Vfaba.Hedin2.R1.5g116080.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g116080.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g116080.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=148bpback to top mRNA from alignment at chr5:803784680..803785126- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.5g116080.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g116080.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g116080.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr5:803784680..803785126- (Vicia fababack to top |