Vfaba.Hedin2.R1.5g188960.1

Transcript Overview
NameVfaba.Hedin2.R1.5g188960.1
Unique NameVfaba.Hedin2.R1.5g188960.1_vfh_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length468
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr5chromosomechr5:1309893824..1309894605 +Vicia faba inbred line Hedin/2 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vfhzwsR464Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vfhzwsR496Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cavfhL223Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL349Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvfhL0788Cajanus cajan Asha genome v1.0Cajanus cajan
crvfhL280Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvfhL435Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL582Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvfhL238Pisum sativum Cameor genome v1aPisum sativum
vfhvfhL183Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvfhL264Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvfhL361Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuR592Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR594Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caivfhL265Cicer arietinum ICC 4958 genome v2Cicer arietinum
anvfhL0448Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0587Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0699Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0857Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL1170Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
vfhvrvR608Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvuaR538Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvuaR550Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvssR616Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvssR628Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvfhL192Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvfhL301Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
carvfhL191Cicer arietinum
carvfhL295Cicer arietinum
ccavfhL264Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL362Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vfhvumR646Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR709Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvvaR563Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vfhvvaR596Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vfhvstR663Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR692Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvfvfhL552Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vfhvunR548Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR551Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vigun06g119000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
PvulFLAVERTChr06.1001437Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-KK1_011137Cajanus cajan Asha genome v1.0Cajanus cajan
Ca_01279Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vigst.05G104600.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vum_05G01076.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Cr_07568.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vum_08G01245.1Vigna umbellata FF25 genome v1.0Vigna umbellata
XM_058882730.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Phvul.006G108100.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-XM_014657771.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-XM_004494707.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
jg21146.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigun06g119000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
evm.model.Chr06.1292Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigun07g160900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Psat3g005440.1Pisum sativum Cameor genome v1aPisum sativum
Vigst.08G120400.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vfaba.Tiffany.R1.5g147600.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.5g188960Vfaba.Hedin2.R1.5g188960_vfh_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.5g188960.1_vfh_v1-exonVfaba.Hedin2.R1.5g188960.1_vfh_v1-exon-chr5_vfh_v1:1309893824..1309893829Vicia fabaexon
Vfaba.Hedin2.R1.5g188960.1_vfh_v1-exonVfaba.Hedin2.R1.5g188960.1_vfh_v1-exon-chr5_vfh_v1:1309893924..1309894121Vicia fabaexon
Vfaba.Hedin2.R1.5g188960.1_vfh_v1-exonVfaba.Hedin2.R1.5g188960.1_vfh_v1-exon-chr5_vfh_v1:1309894224..1309894430Vicia fabaexon
Vfaba.Hedin2.R1.5g188960.1_vfh_v1-exonVfaba.Hedin2.R1.5g188960.1_vfh_v1-exon-chr5_vfh_v1:1309894549..1309894605Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.5g188960.1_vfh_v1-cdsVfaba.Hedin2.R1.5g188960.1_vfh_v1-cds-chr5_vfh_v1:1309893824..1309893829Vicia fabaCDS
Vfaba.Hedin2.R1.5g188960.1_vfh_v1-cdsVfaba.Hedin2.R1.5g188960.1_vfh_v1-cds-chr5_vfh_v1:1309893924..1309894121Vicia fabaCDS
Vfaba.Hedin2.R1.5g188960.1_vfh_v1-cdsVfaba.Hedin2.R1.5g188960.1_vfh_v1-cds-chr5_vfh_v1:1309894224..1309894430Vicia fabaCDS
Vfaba.Hedin2.R1.5g188960.1_vfh_v1-cdsVfaba.Hedin2.R1.5g188960.1_vfh_v1-cds-chr5_vfh_v1:1309894549..1309894605Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.5g188960.1_vfh_v1Vfaba.Hedin2.R1.5g188960.1_vfh_v1Vicia fabapolypeptide
Vfaba.Hedin2.R1.5g188960.1_vfh_v1Vfaba.Hedin2.R1.5g188960.1_vfh_v1-proteinVicia fabapolypeptide


Homology
BLAST of Vfaba.Hedin2.R1.5g188960.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XUR9|A0A1S2XUR9_CICAR (uncharacterized protein LOC101493502 isoform X2 OS=Cicer arietinum OX=3827 GN=LOC101493502 PE=4 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 1.040e-68
Identity = 120/182 (65.93%), Postives = 127/182 (69.78%), Query Frame = 0
Query:    1 MDEYWKRSGQIPAFGNWDIANELPITQYFENARQAGLIRYSSSSGESGSYLHGEQDLYAVDSKNPV--------EKTTRNR-------------ETTM----RKQSKVYDVTEPPRKPTMSKKKTLDVNDVVGK--APLPTRLQKAVDEDLYKISPQLLRKTKRKKMLGFISTCLVPGACVS 155
            MDE WKRSGQIPAFGNWD ANE+PITQYFE+ARQAGLIRYSSSSGES  Y+ G+ DLYAVD K PV         K TRNR             ET+M    RKQ KVYDV E PRKP    KK L VNDVV     PLP+RL K VDEDLYKI P+LLR TKRKKMLGFIS CLVP ACVS
Sbjct:    1 MDE-WKRSGQIPAFGNWDFANEMPITQYFESARQAGLIRYSSSSGESDPYIRGDHDLYAVDFKKPVRNGTHSTLRKATRNRERKYPNVVMVNEKETSMNMNTRKQGKVYDVMEHPRKPI--NKKLLHVNDVVPHRSVPLPSRLPKPVDEDLYKIPPELLRTTKRKKMLGFISKCLVPAACVS 179          
BLAST of Vfaba.Hedin2.R1.5g188960.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XVY5|A0A1S2XVY5_CICAR (uncharacterized protein LOC101493502 isoform X1 OS=Cicer arietinum OX=3827 GN=LOC101493502 PE=4 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 4.410e-68
Identity = 117/178 (65.73%), Postives = 124/178 (69.66%), Query Frame = 0
Query:    5 WKRSGQIPAFGNWDIANELPITQYFENARQAGLIRYSSSSGESGSYLHGEQDLYAVDSKNPV--------EKTTRNR-------------ETTM----RKQSKVYDVTEPPRKPTMSKKKTLDVNDVVGK--APLPTRLQKAVDEDLYKISPQLLRKTKRKKMLGFISTCLVPGACVS 155
            WKRSGQIPAFGNWD ANE+PITQYFE+ARQAGLIRYSSSSGES  Y+ G+ DLYAVD K PV         K TRNR             ET+M    RKQ KVYDV E PRKP    KK L VNDVV     PLP+RL K VDEDLYKI P+LLR TKRKKMLGFIS CLVP ACVS
Sbjct:   10 WKRSGQIPAFGNWDFANEMPITQYFESARQAGLIRYSSSSGESDPYIRGDHDLYAVDFKKPVRNGTHSTLRKATRNRERKYPNVVMVNEKETSMNMNTRKQGKVYDVMEHPRKPI--NKKLLHVNDVVPHRSVPLPSRLPKPVDEDLYKIPPELLRTTKRKKMLGFISKCLVPAACVS 185          
BLAST of Vfaba.Hedin2.R1.5g188960.1 vs. UniProtKB/TrEMBL
Match: tr|A0A396H898|A0A396H898_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr7g0275091 PE=4 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 8.193e-66
Identity = 115/174 (66.09%), Postives = 124/174 (71.26%), Query Frame = 0
Query:    1 MDEYWKRSGQIPAFGNWDIANELPITQYFENARQAGLIRYSSSSGESGSYLH---GEQDLYAVDSKNPVEKTTRNR------------ETTM---RKQSKVYDVTEPPRKPTMSKKKTLDVNDVVGKAPL-PTRLQKAVDEDLYKISPQLLRKTKRKKMLGFISTCLVPGACVS 155
            MD+ WKRSGQIPAFGNWD ANELPITQYFE ARQAGLIRYSSSSGES  Y+H      DLYAV+ K PV K TRNR            ETTM   ++Q KVYDV E PRK  M+K K + V+     APL PTRL K VDEDLYKI P+LLR TKRKKMLGFIS CLVP ACVS
Sbjct:    1 MDDQWKRSGQIPAFGNWDFANELPITQYFETARQAGLIRYSSSSGESDPYVHVRAEHHDLYAVEYKKPVRKATRNRERKYQNVMVNEKETTMNMRKQQGKVYDVMEHPRK-QMNKNKKVHVS-----APLQPTRLPKPVDEDLYKIPPELLRTTKRKKMLGFISKCLVPAACVS 168          
BLAST of Vfaba.Hedin2.R1.5g188960.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3LKR6|A0A2K3LKR6_TRIPR (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g035072 PE=4 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 3.475e-65
Identity = 115/176 (65.34%), Postives = 122/176 (69.32%), Query Frame = 0
Query:    1 MDEYWKRSGQIPAFGNWDIANELPITQYFENARQAGLIRYSSSSGESGSYLHGEQDLYAVDSKNPVEKTTRNRE-----------------TTMRKQSKVYDVTEP----PRKPTMSKKKTLDVNDVVGKAPLPTRLQKAVDEDLYKISPQLLRKTKRKKMLGFISTCLVPGACVS 155
            MDE WKRSGQIPAFGNWD ANELPITQYFE ARQAGLIRYSSSSGES  YL G+ DLYAV+ K PV K TRNRE                   MRKQ KVYDVT      P++ TM+KK  + VN       LPTRL K VDEDLYKI P+LLR TKRKKMLGFIS CLVP ACVS
Sbjct:    1 MDE-WKRSGQIPAFGNWDFANELPITQYFETARQAGLIRYSSSSGESDPYLRGDHDLYAVEYKKPVRKGTRNRERRYQNDVMMNEKETTMNMNMRKQGKVYDVTTEHHYHPQRKTMNKK--VHVNG----PSLPTRLPKPVDEDLYKIPPELLRTTKRKKMLGFISKCLVPAACVS 169          
BLAST of Vfaba.Hedin2.R1.5g188960.1 vs. UniProtKB/TrEMBL
Match: tr|G7L2Z8|G7L2Z8_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MTR_7g116610 PE=4 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.525e-62
Identity = 111/168 (66.07%), Postives = 119/168 (70.83%), Query Frame = 0
Query:    7 RSGQIPAFGNWDIANELPITQYFENARQAGLIRYSSSSGESGSYLH---GEQDLYAVDSKNPVEKTTRNR------------ETTM---RKQSKVYDVTEPPRKPTMSKKKTLDVNDVVGKAPL-PTRLQKAVDEDLYKISPQLLRKTKRKKMLGFISTCLVPGACVS 155
            RSGQIPAFGNWD ANELPITQYFE ARQAGLIRYSSSSGES  Y+H      DLYAV+ K PV K TRNR            ETTM   ++Q KVYDV E PRK  M+K K + V+     APL PTRL K VDEDLYKI P+LLR TKRKKMLGFIS CLVP ACVS
Sbjct:    3 RSGQIPAFGNWDFANELPITQYFETARQAGLIRYSSSSGESDPYVHVRAEHHDLYAVEYKKPVRKATRNRERKYQNVMVNEKETTMNMRKQQGKVYDVMEHPRK-QMNKNKKVHVS-----APLQPTRLPKPVDEDLYKIPPELLRTTKRKKMLGFISKCLVPAACVS 164          
BLAST of Vfaba.Hedin2.R1.5g188960.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445FLD2|A0A445FLD2_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_052533 PE=4 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 7.471e-61
Identity = 105/177 (59.32%), Postives = 120/177 (67.80%), Query Frame = 0
Query:    7 RSGQIPAFGNWDIANELPITQYFENARQAGLIRYSSSSGESGSYLHGEQDLYAVDSKNP---------VEKTTRNR-----------------ETTMRKQSKVYDVTEPPRKPTMSKKKTLDVNDVVGKAPLP--TRLQKAVDEDLYKISPQLLRKTKRKKMLGFISTCLVPGACVS 155
            RSGQIPAFGNWD ANELPITQYFE+ARQAGL+RYSSSSGES  Y+  ++DLYAVD K P         ++K TRNR                 +  MRKQ KV DVTE  RKP    K+ + ++D V ++PLP   RL K VDEDLYKI P+LLR TKRKKMLGFIS CLVP ACVS
Sbjct:    3 RSGQIPAFGNWDYANELPITQYFESARQAGLVRYSSSSGESDPYVRADRDLYAVDFKKPPIRNMPPSTLKKATRNRGRRCVVVKEKEKEKESVKMNMRKQGKVCDVTEQARKPVTVSKEMMRLHDAVPRSPLPRGVRLPKPVDEDLYKIPPELLRTTKRKKMLGFISKCLVPAACVS 179          
BLAST of Vfaba.Hedin2.R1.5g188960.1 vs. UniProtKB/TrEMBL
Match: tr|I1NCG0|I1NCG0_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100777580 PE=4 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 7.471e-61
Identity = 105/177 (59.32%), Postives = 120/177 (67.80%), Query Frame = 0
Query:    7 RSGQIPAFGNWDIANELPITQYFENARQAGLIRYSSSSGESGSYLHGEQDLYAVDSKNP---------VEKTTRNR-----------------ETTMRKQSKVYDVTEPPRKPTMSKKKTLDVNDVVGKAPLP--TRLQKAVDEDLYKISPQLLRKTKRKKMLGFISTCLVPGACVS 155
            RSGQIPAFGNWD ANELPITQYFE+ARQAGL+RYSSSSGES  Y+  ++DLYAVD K P         ++K TRNR                 +  MRKQ KV DVTE  RKP    K+ + ++D V ++PLP   RL K VDEDLYKI P+LLR TKRKKMLGFIS CLVP ACVS
Sbjct:    3 RSGQIPAFGNWDYANELPITQYFESARQAGLVRYSSSSGESDPYVRADRDLYAVDFKKPPIRNMPPSTLKKATRNRGRRCVVVKEKEKEKESVKMNMRKQGKVCDVTEQARKPVTVSKEMMRLHDAVPRSPLPRGVRLPKPVDEDLYKIPPELLRTTKRKKMLGFISKCLVPAACVS 179          
BLAST of Vfaba.Hedin2.R1.5g188960.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6KLU8|A0A4D6KLU8_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG1g1200 PE=4 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.870e-59
Identity = 108/184 (58.70%), Postives = 121/184 (65.76%), Query Frame = 0
Query:    1 MDEYWKRSGQIPAFGNWDIANELPITQYFENARQAGLIRYSSSSGESGSYLHGEQDLYAVDSKNP--------VEKTTRNRE-------------------TTMRKQSKVYDVTEPPRKPTMSKKKTLDVNDVVGKAPLP--TRLQKAVDEDLYKISPQLLRKTKRKKMLGFISTCLVPGACVS 155
            MDE  KRSGQIPAFGNWD ANELPITQYFE ARQAGL+RYSSSSGES +Y+   +DLYAVD K P        V+K TR++E                     MRKQ KV DVTE  RKP    +K + ++D V  +P P   RL K VDEDLYKI P+LLR TKRKKMLGFIS CLVP ACVS
Sbjct:    1 MDE-CKRSGQIPAFGNWDYANELPITQYFETARQAGLVRYSSSSGESDAYVRPHRDLYAVDFKKPLRNMPPSAVKKATRSKERRCAQVMVMVNDKEKESVKVNMRKQGKVCDVTEQARKPV---RKEMHLHDAVPLSPPPRHVRLPKPVDEDLYKIPPELLRTTKRKKMLGFISKCLVPAACVS 180          
BLAST of Vfaba.Hedin2.R1.5g188960.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3S4Y2|A0A0S3S4Y2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.05G131800 PE=4 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 9.122e-58
Identity = 108/184 (58.70%), Postives = 119/184 (64.67%), Query Frame = 0
Query:    1 MDEYWKRSGQIPAFGNWDIANELPITQYFENARQAGLIRYSSSSGESGSYLHGEQDLYAVDSKNP--------VEKTTRNRE-------------------TTMRKQSKVYDVTEPPRKPTMSKKKTLDVNDVVGKAPLP--TRLQKAVDEDLYKISPQLLRKTKRKKMLGFISTCLVPGACVS 155
            MDE  KRSGQIPAFGNWD ANELPITQYFE ARQAGL+RYSSSSGES  Y+   +DLYAVD K P        V+K TR +E                     MRKQ KV DVTE  RKP    +K + ++DVV  +P P   RL K VDEDLYKI P+LLR TKRKKMLGFIS CLVP AC S
Sbjct:    1 MDE-CKRSGQIPAFGNWDYANELPITQYFETARQAGLVRYSSSSGESDPYVRPHRDLYAVDFKKPLRNMPPSTVKKATRIKERRCAQVMVMVNDKEKEGAKVNMRKQGKVCDVTEQARKPG---RKEMHLHDVVPLSPPPRAVRLPKPVDEDLYKIPPELLRTTKRKKMLGFISKCLVPAACAS 180          
BLAST of Vfaba.Hedin2.R1.5g188960.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9VL48|A0A0L9VL48_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan10g159500 PE=4 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 3.185e-56
Identity = 107/184 (58.15%), Postives = 118/184 (64.13%), Query Frame = 0
Query:    1 MDEYWKRSGQIPAFGNWDIANELPITQYFENARQAGLIRYSSSSGESGSYLHGEQDLYAVDSKNP--------VEKTTRNRE-------------------TTMRKQSKVYDVTEPPRKPTMSKKKTLDVNDVVGKAPLP--TRLQKAVDEDLYKISPQLLRKTKRKKMLGFISTCLVPGACVS 155
            MDE  KRSGQIPAFGNWD ANELPITQYFE ARQAGL+RYSSSSGES  Y+   +DLYAVD K P        V+K TR +E                     MRKQ KV DVTE  RKP    +K + ++ VV  +P P   RL K VDEDLYKI P+LLR TKRKKMLGFIS CLVP AC S
Sbjct:    1 MDE-CKRSGQIPAFGNWDYANELPITQYFETARQAGLVRYSSSSGESDPYVRPHRDLYAVDFKKPLRNMPPSTVKKATRIKERRCAQVMVMVNDKEKEGAKVNMRKQGKVCDVTEQARKPG---RKEIHLHYVVPLSPPPRAVRLPKPVDEDLYKIPPELLRTTKRKKMLGFISKCLVPAACAS 180          
BLAST of Vfaba.Hedin2.R1.5g188960.1 vs. Araport11
Match: AT5G18310.2 (| ubiquitin hydrolase | Chr5:6061759-6062912 FORWARD LENGTH=167 | 201606)

HSP 1 Score: 89.7373 bits (221), Expect = 4.393e-23
Identity = 66/168 (39.29%), Postives = 87/168 (51.79%), Query Frame = 0
Query:    2 DEYWKRSGQIPAFGNWDIANELPITQYFENARQAGLIRYS--------SSSGESGSYLHGEQDLYAVDSKNPVEKTTR-NRETTMRK-----QSKVYDVTEPPRKPTMSKKKTLDVNDV---VGKAPLPTRLQKAVDEDLYKISPQLLRKTKRKKMLGFISTCLVPGA 152
            D Y K+SGQIP FG W+ ANE+PITQYFEN RQAGLIR+         S++  S S      +   + S +P  +     R+T   K     Q +V DV+        S K  +DVN V        L  +  K VDEDLYKI P+ +  + RK+   F++ CLVP A
Sbjct:    7 DTYKKKSGQIPRFGEWEEANEMPITQYFENPRQAGLIRHQYTTTSSASSTTTSSSSSSSSSAEALKLASHHPRPRHLHAQRQTAGTKEKRGPQRRVRDVS------AQSDKYYIDVNGVKQFKNDVALTCKPPKPVDEDLYKIPPEFIHSSTRKRRPSFLA-CLVPCA 167          
BLAST of Vfaba.Hedin2.R1.5g188960.1 vs. Araport11
Match: AT5G18310.1 (| ubiquitin hydrolase | Chr5:6061759-6062912 FORWARD LENGTH=139 | 201606)

HSP 1 Score: 88.5817 bits (218), Expect = 6.430e-23
Identity = 58/154 (37.66%), Postives = 77/154 (50.00%), Query Frame = 0
Query:    2 DEYWKRSGQIPAFGNWDIANELPITQYFENARQAGLIRYSSSSGESGSYLHGEQDLYAVDSKNPVEKTTRNRETTMRKQSKVYDVTEPPRKPTMSKKKTLDVNDV---VGKAPLPTRLQKAVDEDLYKISPQLLRKTKRKKMLGFISTCLVPGA 152
            D Y K+SGQIP FG W+ ANE+PITQYFEN RQA  ++ +S       +LH ++       K                Q +V DV+        S K  +DVN V        L  +  K VDEDLYKI P+ +  + RK+   F++ CLVP A
Sbjct:    7 DTYKKKSGQIPRFGEWEEANEMPITQYFENPRQAEALKLASHHPRP-RHLHAQRQTAGTKEKR-------------GPQRRVRDVS------AQSDKYYIDVNGVKQFKNDVALTCKPPKPVDEDLYKIPPEFIHSSTRKRRPSFLA-CLVPCA 139          
BLAST of Vfaba.Hedin2.R1.5g188960.1 vs. Araport11
Match: AT5G48500.1 (| pathogenic type III effector avirulence factor Avr AvrRpt-cleavage: cleavage site protein | Chr5:19653235-19654017 FORWARD LENGTH=167 | 201606)

HSP 1 Score: 66.6254 bits (161), Expect = 2.813e-14
Identity = 58/171 (33.92%), Postives = 79/171 (46.20%), Query Frame = 0
Query:    3 EYWKRSGQIPAFGNWDIANELPITQYFENA--RQAGLIRYSSSSGESGSYLHGEQDLY-----------------AVDSKNPVEKTTRNRETTMRKQSKVYDVTEPPRKPTMSKKKTLDVNDVVGKAPLPTRLQKAVDEDLYKISPQLLR-KTKRKK---MLGFISTCLVP 150
            EY +R G +PAFG+WD  + +P TQ FE A  +Q   + Y+S   +   YL G  DLY                 A   + P EK     +     +++  +   P   PT   K+ +       KAP P      VDEDLYK+SPQLL  K+KRK+     G IS C +P
Sbjct:    9 EYCRR-GHVPAFGSWDWNDAVPFTQCFETATTQQPAFLHYASYPQDRDLYLAG--DLYDNHHLVAPAVIIVPRRRAKVGQEPAEKKRNVSKQQHNYKTEAREFNAPVSCPTPVVKRRM-------KAPKP------VDEDLYKVSPQLLSVKSKRKRGGGGFGCISRCFLP 163          
BLAST of Vfaba.Hedin2.R1.5g188960.1 vs. Araport11
Match: AT5G18310.3 (| ubiquitin hydrolase | Chr5:6062222-6062912 FORWARD LENGTH=140 | 201606)

HSP 1 Score: 59.3066 bits (142), Expect = 1.218e-11
Identity = 52/147 (35.37%), Postives = 71/147 (48.30%), Query Frame = 0
Query:   23 LPITQYFENARQAGLIRYS--------SSSGESGSYLHGEQDLYAVDSKNPVEKTTR-NRETTMRK-----QSKVYDVTEPPRKPTMSKKKTLDVNDV---VGKAPLPTRLQKAVDEDLYKISPQLLRKTKRKKMLGFISTCLVPGA 152
            +PITQYFEN RQAGLIR+         S++  S S      +   + S +P  +     R+T   K     Q +V DV+        S K  +DVN V        L  +  K VDEDLYKI P+ +  + RK+   F++ CLVP A
Sbjct:    1 MPITQYFENPRQAGLIRHQYTTTSSASSTTTSSSSSSSSSAEALKLASHHPRPRHLHAQRQTAGTKEKRGPQRRVRDVS------AQSDKYYIDVNGVKQFKNDVALTCKPPKPVDEDLYKIPPEFIHSSTRKRRPSFLA-CLVPCA 140          
BLAST of Vfaba.Hedin2.R1.5g188960.1 vs. Araport11
Match: AT5G18310.4 (| ubiquitin hydrolase | Chr5:6062222-6062912 FORWARD LENGTH=112 | 201606)

HSP 1 Score: 58.151 bits (139), Expect = 1.631e-11
Identity = 44/133 (33.08%), Postives = 61/133 (45.86%), Query Frame = 0
Query:   23 LPITQYFENARQAGLIRYSSSSGESGSYLHGEQDLYAVDSKNPVEKTTRNRETTMRKQSKVYDVTEPPRKPTMSKKKTLDVNDVV---GKAPLPTRLQKAVDEDLYKISPQLLRKTKRKKMLGFISTCLVPGA 152
            +PITQYFEN RQA  ++ +S       +LH ++       K                Q +V DV+        S K  +DVN V        L  +  K VDEDLYKI P+ +  + RK+   F++ CLVP A
Sbjct:    1 MPITQYFENPRQAEALKLASHHPRP-RHLHAQRQTAGTKEKR-------------GPQRRVRDVS------AQSDKYYIDVNGVKQFKNDVALTCKPPKPVDEDLYKIPPEFIHSSTRKRRPSFLA-CLVPCA 112          
The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.5g188960.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2XUR9|A0A1S2XUR9_CICAR1.040e-6865.93uncharacterized protein LOC101493502 isoform X2 OS... [more]
tr|A0A1S2XVY5|A0A1S2XVY5_CICAR4.410e-6865.73uncharacterized protein LOC101493502 isoform X1 OS... [more]
tr|A0A396H898|A0A396H898_MEDTR8.193e-6666.09Uncharacterized protein OS=Medicago truncatula OX=... [more]
tr|A0A2K3LKR6|A0A2K3LKR6_TRIPR3.475e-6565.34Uncharacterized protein OS=Trifolium pratense OX=5... [more]
tr|G7L2Z8|G7L2Z8_MEDTR4.525e-6266.07Uncharacterized protein OS=Medicago truncatula OX=... [more]
tr|A0A445FLD2|A0A445FLD2_GLYSO7.471e-6159.32Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|I1NCG0|I1NCG0_SOYBN7.471e-6159.32Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A4D6KLU8|A0A4D6KLU8_VIGUN3.870e-5958.70Uncharacterized protein OS=Vigna unguiculata OX=39... [more]
tr|A0A0S3S4Y2|A0A0S3S4Y2_PHAAN9.122e-5858.70Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A0L9VL48|A0A0L9VL48_PHAAN3.185e-5658.15Uncharacterized protein OS=Phaseolus angularis OX=... [more]
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BLAST of Vfaba.Hedin2.R1.5g188960.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Vfaba.Hedin2.R1.5g188960.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G18310.24.393e-2339.29| ubiquitin hydrolase | Chr5:6061759-6062912 FORWA... [more]
AT5G18310.16.430e-2337.66| ubiquitin hydrolase | Chr5:6061759-6062912 FORWA... [more]
AT5G48500.12.813e-1433.92| pathogenic type III effector avirulence factor A... [more]
AT5G18310.31.218e-1135.37| ubiquitin hydrolase | Chr5:6062222-6062912 FORWA... [more]
AT5G18310.41.631e-1133.08| ubiquitin hydrolase | Chr5:6062222-6062912 FORWA... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..97
NoneNo IPR availablePANTHERPTHR33699EXPRESSED PROTEINcoord: 7..153

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Hedin2.R1.5g188960.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g188960.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g188960.1; organism=Vicia faba; type=mRNA; length=468bp
ATGGATGAATATTGGAAGAGAAGTGGTCAAATACCAGCTTTCGGAAACTG
GGATATTGCGAACGAGTTGCCAATAACTCAGTACTTCGAGAATGCAAGAC
AAGCTGGTTTGATTCGTTACAGTTCTTCATCTGGCGAGAGCGGTTCTTAC
CTGCACGGAGAACAAGATCTGTATGCAGTTGATTCCAAGAATCCAGTTGA
AAAGACGACGAGGAACAGAGAAACAACCATGAGAAAACAGAGCAAAGTGT
ACGATGTAACGGAACCCCCAAGGAAACCGACAATGAGCAAGAAGAAGACA
TTAGATGTAAACGACGTCGTTGGAAAGGCTCCTTTACCAACCAGACTTCA
AAAAGCAGTTGACGAAGATCTCTACAAAATTTCTCCACAACTTCTTCGCA
AAACCAAACGGAAAAAAATGTTGGGGTTCATTTCCACGTGTCTGGTGCCT
GGTGCCTGCGTTTCATGA
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protein sequence of Vfaba.Hedin2.R1.5g188960.1_vfh_v1

>Vfaba.Hedin2.R1.5g188960.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g188960.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g188960.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=155bp
MDEYWKRSGQIPAFGNWDIANELPITQYFENARQAGLIRYSSSSGESGSY
LHGEQDLYAVDSKNPVEKTTRNRETTMRKQSKVYDVTEPPRKPTMSKKKT
LDVNDVVGKAPLPTRLQKAVDEDLYKISPQLLRKTKRKKMLGFISTCLVP
GACVS
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mRNA from alignment at chr5:1309893824..1309894605+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Hedin2.R1.5g188960.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g188960.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g188960.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr5:1309893824..1309894605+ (Vicia faba
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