rna-XM_014638967.2

Transcript Overview
Namerna-XM_014638967.2
Unique Namerna-XM_014638967.2_VrVC1973A-SNU_v1
TypemRNA
OrganismVigna radiata (Mung bean, green gram)
Sequence length648
ProductIgA FC receptor, transcript variant X1
References
External references for this mRNA
DatabaseAccession
GeneID106756506
GenbankXM_014638967.2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr02chromosomechr02:22217206..22218218 +Vigna radiata cv. VC1973A genome v6.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
anvrvL0311Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0351Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0689Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caivrvL484Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavrvL398Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavrvL512Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvrvL0014Cajanus cajan Asha genome v1.0Cajanus cajan
ccvrvL0222Cajanus cajan Asha genome v1.0Cajanus cajan
crvrvL456Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvrvL801Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvrvL019Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvrvL378Pisum sativum Cameor genome v1aPisum sativum
psvrvL646Pisum sativum Cameor genome v1aPisum sativum
tifvrvL219Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL646Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvrvL230Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvssR260Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR279Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvrvL657Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuR193Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuaR175Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvzwsR204Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuR212Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuaR195Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvzwsR231Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvrvL373Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvrvL484Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvrvL195Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL341Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvrvL369Cicer arietinum
carvrvL482Cicer arietinum
ccavrvL026Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL711Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vrvvumR195Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR218Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvvaR237Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR253Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvstR185Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR206Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvfvrvL015Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL202Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vrvvunR187Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vrvvunR205Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
rna-TanjilR_11005Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-KK1_019877Cajanus cajan Asha genome v1.0Cajanus cajan
Cc_v2.0_00090.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
XM_058931097.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Phvul.001G261300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-XM_027334759.1Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Ca_11344Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vum_04G03221.1Vigna umbellata FF25 genome v1.0Vigna umbellata
jg53554.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Ca_13623.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vigst.04G289600.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
evm.model.Chr01.2318Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Hedin2.R1.2g111360.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Va03G085230.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Psat05G0288300-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Cr_13024.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vfaba.Tiffany.R1.2g091480.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Psat5g095440.1Pisum sativum Cameor genome v1aPisum sativum
Vigun01g246700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun01g246700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC106756506gene-LOC106756506_VrVC1973A-SNU_v1Vigna radiatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_014638967.2-1exon-XM_014638967.2-1_VrVC1973A-SNU_v1Vigna radiataexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_014494453.2cds-XP_014494453.2_VrVC1973A-SNU_v1Vigna radiataCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_014638967.2_VrVC1973A-SNU_v1rna-XM_014638967.2_VrVC1973A-SNU_v1Vigna radiatapolypeptide
rna-XM_014638967.2_VrVC1973A-SNU_v1rna-XM_014638967.2_VrVC1973A-SNU_v1-proteinVigna radiatapolypeptide


Homology
BLAST of rna-XM_014638967.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9UKF5|ADA29_HUMAN (Disintegrin and metalloproteinase domain-containing protein 29 OS=Homo sapiens OX=9606 GN=ADAM29 PE=1 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 5.846e-13
Identity = 40/115 (34.78%), Postives = 60/115 (52.17%), Query Frame = 0
Query:  102 KPAKPDGPAKPVVRPKLDEPPSGTRRIDQFFRKPEPQ-NPTQAQSPENPAQAQSSEIPAQAQAPEIPSQAQSPEVPSEPQSPEVPSETQSPRVPSESQSPEAPSQTQLPLPVDES 215
            K +KP    + V  P   E     RR  +   + +P   P+Q+Q P  P+Q+    +P+Q+Q P  PSQ+Q   +PS+ Q P +PS++     PS+SQ P  PSQ Q  L   +S
Sbjct:  699 KKSKPIKKQQDVQTPSAKEEEKIQRRPHELPPQSQPWVMPSQSQPPVTPSQSHPQVMPSQSQPPVTPSQSQPRVMPSQSQPPVMPSQSHPQLTPSQSQPPVTPSQRQPQLMPSQS 813          

HSP 2 Score: 67.0106 bits (162), Expect = 1.109e-11
Identity = 36/104 (34.62%), Postives = 55/104 (52.88%), Query Frame = 0
Query:  102 KPAKPDGPAKPVVRPKLDEPPSGTRRIDQFFRKPEPQ-NPTQAQSPENPAQAQSSEIPAQAQAPEIPSQAQSPEVPSEPQSPEVPSETQSPRVPSESQSPEAPS 204
            +P +    ++P V P   +PP           +  PQ  P+Q+Q P  P+Q+Q   +P+Q+Q P +PSQ+     PS+ Q P  PS+ Q   +PS+SQ P  PS
Sbjct:  724 RPHELPPQSQPWVMPSQSQPPVTPS-------QSHPQVMPSQSQPPVTPSQSQPRVMPSQSQPPVMPSQSHPQLTPSQSQPPVTPSQRQPQLMPSQSQPPVTPS 820          
BLAST of rna-XM_014638967.2 vs. Araport11
Match: AT5G43250.1 (| nuclear factor Y%2C subunit C13 | Chr5:17356174-17356566 REVERSE LENGTH=130 | 201606)

HSP 1 Score: 150.984 bits (380), Expect = 9.793e-47
Identity = 80/133 (60.15%), Postives = 96/133 (72.18%), Query Frame = 0
Query:    7 EEENGVSIQLEFPKSRVKKIMTLDKDVKRVSSEALFLVSRSTELFLQFLAEKSAKVAIEKKRKTVNLEHVRMAVKRHQPTRDFLLDDLPPPSEPAKPAKPDGPAKPVVRPKLDEPPSGTRRIDQFFRKPEPQN 139
            EEE G SI+ EFP  RVKKIM LDKD+ +++SEAL +++ STELFL FLAEKSA V  EKKRKTVNL+H+R+AVKRHQPT DFLLD LP P++P K        K V   K+  PP GTRRID FF K + + 
Sbjct:    2 EEEEG-SIRPEFPIGRVKKIMKLDKDINKINSEALHVITYSTELFLHFLAEKSAVVTAEKKRKTVNLDHLRIAVKRHQPTSDFLLDSLPLPAQPVK------HTKSVSDKKIPAPPIGTRRIDDFFSKGKAKT 127          
BLAST of rna-XM_014638967.2 vs. Araport11
Match: AT3G12480.1 (| nuclear factor Y%2C subunit C11 | Chr3:3958065-3960278 FORWARD LENGTH=293 | 201606)

HSP 1 Score: 62.3882 bits (150), Expect = 1.972e-11
Identity = 30/73 (41.10%), Postives = 49/73 (67.12%), Query Frame = 0
Query:   18 FPKSRVKKIMTLDKDVKRVSSEALFLVSRSTELFLQFLAEKSAKVAIEKKRKTVNLEHVRMAVKRHQPTRDFL 90
            FP +R+KKIM  D+DV +++     LVS+S ELFLQ L +++ ++ +E+  KTV+  H++  V+R+    DFL
Sbjct:    9 FPAARIKKIMQADEDVGKIALAVPVLVSKSLELFLQDLCDRTYEITLERGAKTVSSLHLKHCVERYN-VFDFL 80          
BLAST of rna-XM_014638967.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3TL05|A0A1S3TL05_VIGRR (uncharacterized protein LOC106756506 OS=Vigna radiata var. radiata OX=3916 GN=LOC106756506 PE=4 SV=2)

HSP 1 Score: 415.231 bits (1066), Expect = 3.279e-146
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0
Query:    1 MIAMAEEEENGVSIQLEFPKSRVKKIMTLDKDVKRVSSEALFLVSRSTELFLQFLAEKSAKVAIEKKRKTVNLEHVRMAVKRHQPTRDFLLDDLPPPSEPAKPAKPDGPAKPVVRPKLDEPPSGTRRIDQFFRKPEPQNPTQAQSPENPAQAQSSEIPAQAQAPEIPSQAQSPEVPSEPQSPEVPSETQSPRVPSESQSPEAPSQTQLPLPVDES 215
            MIAMAEEEENGVSIQLEFPKSRVKKIMTLDKDVKRVSSEALFLVSRSTELFLQFLAEKSAKVAIEKKRKTVNLEHVRMAVKRHQPTRDFLLDDLPPPSEPAKPAKPDGPAKPVVRPKLDEPPSGTRRIDQFFRKPEPQNPTQAQSPENPAQAQSSEIPAQAQAPEIPSQAQSPEVPSEPQSPEVPSETQSPRVPSESQSPEAPSQTQLPLPVDES
Sbjct:    1 MIAMAEEEENGVSIQLEFPKSRVKKIMTLDKDVKRVSSEALFLVSRSTELFLQFLAEKSAKVAIEKKRKTVNLEHVRMAVKRHQPTRDFLLDDLPPPSEPAKPAKPDGPAKPVVRPKLDEPPSGTRRIDQFFRKPEPQNPTQAQSPENPAQAQSSEIPAQAQAPEIPSQAQSPEVPSEPQSPEVPSETQSPRVPSESQSPEAPSQTQLPLPVDES 215          
BLAST of rna-XM_014638967.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6NH78|A0A4D6NH78_VIGUN (DNA polymerase epsilon subunit 4 OS=Vigna unguiculata OX=3917 GN=DEO72_LG11g93 PE=4 SV=1)

HSP 1 Score: 323.939 bits (829), Expect = 1.710e-110
Identity = 169/188 (89.89%), Postives = 175/188 (93.09%), Query Frame = 0
Query:    4 MAEEEENGVSIQLEFPKSRVKKIMTLDKDVKRVSSEALFLVSRSTELFLQFLAEKSAKVAIEKKRKTVNLEHVRMAVKRHQPTRDFLLDDLPPPSEPAKPAKPDGPAKPVVRPKLDEPPSGTRRIDQFFRKPEPQNPTQAQSPENPAQAQSSEIPAQAQAPEIPSQAQSPEVPSEPQSPEVPSETQSP 191
            MAEEEEN VS QLEFPKSRVKKI+TLDKDVKRVSSEALFLVSRSTELFLQFLAEKSAKVAIEKKRKTVNLEH+RMAVKRHQPTRDFLLDDLPPPS   +PAKPDGP +PVVRPKLD PP GTRRIDQFFRKP PQNP Q QSPENPAQAQSSEIPAQAQAPEIPSQAQSPEVPS+ QSPEVPS+ QSP
Sbjct:    1 MAEEEENEVSAQLEFPKSRVKKIITLDKDVKRVSSEALFLVSRSTELFLQFLAEKSAKVAIEKKRKTVNLEHLRMAVKRHQPTRDFLLDDLPPPS---RPAKPDGPTQPVVRPKLDAPPPGTRRIDQFFRKPVPQNPAQVQSPENPAQAQSSEIPAQAQAPEIPSQAQSPEVPSQAQSPEVPSQVQSP 185          
BLAST of rna-XM_014638967.2 vs. UniProtKB/TrEMBL
Match: tr|V7D3D5|V7D3D5_PHAVU (CBFD_NFYB_HMF domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G261300g PE=4 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 1.331e-99
Identity = 158/211 (74.88%), Postives = 176/211 (83.41%), Query Frame = 0
Query:    4 MAEEEENGVSIQLEFPKSRVKKIMTLDKDVKRVSSEALFLVSRSTELFLQFLAEKSAKVAIEKKRKTVNLEHVRMAVKRHQPTRDFLLDDLPPPSEPAKPAKPDGPAKPVVRPKLDEPPSGTRRIDQFFRKPEPQNPTQAQSPENPAQAQSSEIPAQAQAPEIPSQAQSPEVPSEPQSPEVPSETQSPRVPSESQSPEAPSQTQLPLPVDE 214
            MAEEEENG SIQLEFPK RVKKIM LD+DVKRVSSEALFLVSRSTELFLQFLAEKSA VAIEKKRKTVNLEHVR+AV+RHQPTRDFLLDDLPPPS PAK  +   P +PV RPKLD PP GTRRIDQFFRKPEPQN  +AQS ENPAQ       AQAQ PEIP+QAQSPE+P++ Q PEV ++ QSP + +++ SPE P+Q Q P+PVDE
Sbjct:    1 MAEEEENGASIQLEFPKGRVKKIMVLDEDVKRVSSEALFLVSRSTELFLQFLAEKSANVAIEKKRKTVNLEHVRIAVQRHQPTRDFLLDDLPPPSRPAKLGE---PTQPVSRPKLDAPPPGTRRIDQFFRKPEPQNLAKAQSTENPAQ-------AQAQPPEIPAQAQSPEIPAQAQPPEVAAQAQSPEIVAQALSPEIPAQAQSPVPVDE 201          
BLAST of rna-XM_014638967.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445HI05|A0A445HI05_GLYSO (CBFD_NFYB_HMF domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_037161 PE=4 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 1.435e-80
Identity = 131/164 (79.88%), Postives = 140/164 (85.37%), Query Frame = 0
Query:    2 IAMAEEEENGVSIQLEFPKSRVKKIMTLDKDVKRVSSEALFLVSRSTELFLQFLAEKSAKVAIEKKRKTVNLEHVRMAVKRHQPTRDFLLDDLPPPSEPAKPAKPDGPAKPVVRPKLDEPPSGTRRIDQFFRKPEPQNPTQA--QSPENPAQAQSSEIPAQAQA 163
            + MA+EEENGVSIQLEFPK RVKKIM LDKDVKRVSSEALFLVSRSTELFLQFLAEKSA+VAIEKKRKTVNLEH+R+AVKRHQPTRDFLLD+LPPPS+    AKPD P +P  RPKLD  P GTR IDQFFRKPEP+N  QA  Q PENPAQAQS E P Q QA
Sbjct:    1 MVMADEEENGVSIQLEFPKGRVKKIMALDKDVKRVSSEALFLVSRSTELFLQFLAEKSAQVAIEKKRKTVNLEHIRVAVKRHQPTRDFLLDELPPPSQ---AAKPDKPTQPAGRPKLDPAPRGTRCIDQFFRKPEPENTAQAPGQPPENPAQAQSPENPDQDQA 161          
BLAST of rna-XM_014638967.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0R0HSF8|A0A0R0HSF8_SOYBN (CBFD_NFYB_HMF domain-containing protein OS=Glycine max OX=3847 GN=100790556 PE=4 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 1.435e-80
Identity = 131/164 (79.88%), Postives = 140/164 (85.37%), Query Frame = 0
Query:    2 IAMAEEEENGVSIQLEFPKSRVKKIMTLDKDVKRVSSEALFLVSRSTELFLQFLAEKSAKVAIEKKRKTVNLEHVRMAVKRHQPTRDFLLDDLPPPSEPAKPAKPDGPAKPVVRPKLDEPPSGTRRIDQFFRKPEPQNPTQA--QSPENPAQAQSSEIPAQAQA 163
            + MA+EEENGVSIQLEFPK RVKKIM LDKDVKRVSSEALFLVSRSTELFLQFLAEKSA+VAIEKKRKTVNLEH+R+AVKRHQPTRDFLLD+LPPPS+    AKPD P +P  RPKLD  P GTR IDQFFRKPEP+N  QA  Q PENPAQAQS E P Q QA
Sbjct:    1 MVMADEEENGVSIQLEFPKGRVKKIMALDKDVKRVSSEALFLVSRSTELFLQFLAEKSAQVAIEKKRKTVNLEHIRVAVKRHQPTRDFLLDELPPPSQ---AAKPDKPTQPAGRPKLDPAPRGTRCIDQFFRKPEPENTAQAPGQPPENPAQAQSPENPDQDQA 161          
BLAST of rna-XM_014638967.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445FMA3|A0A445FMA3_GLYSO (CBFD_NFYB_HMF domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_047137 PE=4 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 2.674e-80
Identity = 130/162 (80.25%), Postives = 138/162 (85.19%), Query Frame = 0
Query:    2 IAMAEEEENGVSIQLEFPKSRVKKIMTLDKDVKRVSSEALFLVSRSTELFLQFLAEKSAKVAIEKKRKTVNLEHVRMAVKRHQPTRDFLLDDLPPPSEPAKPAKPDGPAKPVVRPKLDEPPSGTRRIDQFFRKPEPQNPTQAQSPENPAQAQSSEIPAQAQA 163
            + MAEEEE+GVSIQLEFPK RVKKIM LDKDVKRVSSEALFLVSRSTELFLQFLAEKSA+VAIEKKRKTVNLEH+R AVKRHQPTRDFLLD+LPPPS+   P KPD P +P  RPKLD PP GTRRID FFRKPE  +P QAQ PENPAQAQ  E P Q QA
Sbjct:    1 MVMAEEEESGVSIQLEFPKGRVKKIMALDKDVKRVSSEALFLVSRSTELFLQFLAEKSAQVAIEKKRKTVNLEHIREAVKRHQPTRDFLLDELPPPSQ---PTKPDRPTQPAGRPKLDPPPRGTRRIDLFFRKPELDDPAQAQPPENPAQAQPPENPDQDQA 159          
BLAST of rna-XM_014638967.2 vs. UniProtKB/TrEMBL
Match: tr|I1MYF9|I1MYF9_SOYBN (CBFD_NFYB_HMF domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_18G007100 PE=4 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 2.674e-80
Identity = 130/162 (80.25%), Postives = 138/162 (85.19%), Query Frame = 0
Query:    2 IAMAEEEENGVSIQLEFPKSRVKKIMTLDKDVKRVSSEALFLVSRSTELFLQFLAEKSAKVAIEKKRKTVNLEHVRMAVKRHQPTRDFLLDDLPPPSEPAKPAKPDGPAKPVVRPKLDEPPSGTRRIDQFFRKPEPQNPTQAQSPENPAQAQSSEIPAQAQA 163
            + MAEEEE+GVSIQLEFPK RVKKIM LDKDVKRVSSEALFLVSRSTELFLQFLAEKSA+VAIEKKRKTVNLEH+R AVKRHQPTRDFLLD+LPPPS+   P KPD P +P  RPKLD PP GTRRID FFRKPE  +P QAQ PENPAQAQ  E P Q QA
Sbjct:    1 MVMAEEEESGVSIQLEFPKGRVKKIMALDKDVKRVSSEALFLVSRSTELFLQFLAEKSAQVAIEKKRKTVNLEHIREAVKRHQPTRDFLLDELPPPSQ---PTKPDRPTQPAGRPKLDPPPRGTRRIDLFFRKPELDDPAQAQPPENPAQAQPPENPDQDQA 159          
BLAST of rna-XM_014638967.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2QRQ4|A0A0B2QRQ4_GLYSO (Dr1-associated corepressor like OS=Glycine soja OX=3848 GN=glysoja_025243 PE=4 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 4.465e-80
Identity = 130/160 (81.25%), Postives = 137/160 (85.62%), Query Frame = 0
Query:    4 MAEEEENGVSIQLEFPKSRVKKIMTLDKDVKRVSSEALFLVSRSTELFLQFLAEKSAKVAIEKKRKTVNLEHVRMAVKRHQPTRDFLLDDLPPPSEPAKPAKPDGPAKPVVRPKLDEPPSGTRRIDQFFRKPEPQNPTQAQSPENPAQAQSSEIPAQAQA 163
            MAEEEE+GVSIQLEFPK RVKKIM LDKDVKRVSSEALFLVSRSTELFLQFLAEKSA+VAIEKKRKTVNLEH+R AVKRHQPTRDFLLD+LPPPS+   P KPD P +P  RPKLD PP GTRRID FFRKPE  +P QAQ PENPAQAQ  E P Q QA
Sbjct:    1 MAEEEESGVSIQLEFPKGRVKKIMALDKDVKRVSSEALFLVSRSTELFLQFLAEKSAQVAIEKKRKTVNLEHIREAVKRHQPTRDFLLDELPPPSQ---PTKPDRPTQPAGRPKLDPPPRGTRRIDLFFRKPELDDPAQAQPPENPAQAQPPENPDQDQA 157          
BLAST of rna-XM_014638967.2 vs. UniProtKB/TrEMBL
Match: tr|A0A151U8Q7|A0A151U8Q7_CAJCA (Dr1-associated corepressor OS=Cajanus cajan OX=3821 GN=KK1_019877 PE=4 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.856e-72
Identity = 120/151 (79.47%), Postives = 127/151 (84.11%), Query Frame = 0
Query:    4 MAEEEENGVSIQLEFPKSRVKKIMTLDKDVKRVSSEALFLVSRSTELFLQFLAEKSAKVAIEKKRKTVNLEHVRMAVKRHQPTRDFLLDDLPPPSEPAKPAKPDGPAKPVVRPKLDEPPSGTRRIDQFFRKPEPQNPTQAQSPENPAQAQS 154
            MAEEEEN  S   EFPK RVKKIMTLDKDVKRVSSEALFLVSRSTELFLQFLAEKSA+VAIEKKRKTVNLEH+R+AVKRHQPTRDFLLDDLPPPS+P KP K   PA    RPK D+P  GTRRIDQFFRKPEP+NP QA+     AQAQS
Sbjct:    1 MAEEEENAASTVSEFPKGRVKKIMTLDKDVKRVSSEALFLVSRSTELFLQFLAEKSAQVAIEKKRKTVNLEHIRVAVKRHQPTRDFLLDDLPPPSQPNKPDKHTTPA---ARPKSDKPLPGTRRIDQFFRKPEPENPAQAE-----AQAQS 143          
BLAST of rna-XM_014638967.2 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3NUG6|A0A2K3NUG6_TRIPR (Nuclear transcription factor Y subunit C-4-like protein OS=Trifolium pratense OX=57577 GN=L195_g003155 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.092e-58
Identity = 107/164 (65.24%), Postives = 124/164 (75.61%), Query Frame = 0
Query:    1 MIAMAEEEENGVSIQLEFPKSRVKKIMTLDKDVKRVSSEALFLVSRSTELFLQFLAEKSAKVAIEKKRKTVNLEHVRMAVKRHQPTRDFLLDDLPPPSEPAKPAKPDGPAKPVVRPKLDEPPSGTRRIDQFFRKPEPQNPTQAQSPENPAQAQ-SSEIPAQAQA 163
            ++ MAEEEEN +SI+ EFPKSRVKKIMTLD+DVKRVSSEALFLVS+STELFLQ LAEKSA+VAIEKKRKTV LEH+R+AVKR++P  DFLLD LP PSE  K  KP   A    RPK    P GTRRIDQ FRK E Q   +A+  E   +AQ  ++I AQ +A
Sbjct:    2 VMVMAEEEENALSIEPEFPKSRVKKIMTLDEDVKRVSSEALFLVSKSTELFLQLLAEKSAEVAIEKKRKTVKLEHIRIAVKRNRPISDFLLDSLPMPSETTKSDKPVVVAD---RPK--SVPVGTRRIDQIFRKSEAQAQVEAE-VEAQVEAQVEAQIEAQVEA 159          
The following BLAST results are available for this feature:
BLAST of rna-XM_014638967.2 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
sp|Q9UKF5|ADA29_HUMAN5.846e-1334.78Disintegrin and metalloproteinase domain-containin... [more]
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BLAST of rna-XM_014638967.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G43250.19.793e-4760.15| nuclear factor Y%2C subunit C13 | Chr5:17356174-... [more]
AT3G12480.11.972e-1141.10| nuclear factor Y%2C subunit C11 | Chr3:3958065-3... [more]
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BLAST of rna-XM_014638967.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S3TL05|A0A1S3TL05_VIGRR3.279e-146100.00uncharacterized protein LOC106756506 OS=Vigna radi... [more]
tr|A0A4D6NH78|A0A4D6NH78_VIGUN1.710e-11089.89DNA polymerase epsilon subunit 4 OS=Vigna unguicul... [more]
tr|V7D3D5|V7D3D5_PHAVU1.331e-9974.88CBFD_NFYB_HMF domain-containing protein OS=Phaseol... [more]
tr|A0A445HI05|A0A445HI05_GLYSO1.435e-8079.88CBFD_NFYB_HMF domain-containing protein OS=Glycine... [more]
tr|A0A0R0HSF8|A0A0R0HSF8_SOYBN1.435e-8079.88CBFD_NFYB_HMF domain-containing protein OS=Glycine... [more]
tr|A0A445FMA3|A0A445FMA3_GLYSO2.674e-8080.25CBFD_NFYB_HMF domain-containing protein OS=Glycine... [more]
tr|I1MYF9|I1MYF9_SOYBN2.674e-8080.25CBFD_NFYB_HMF domain-containing protein OS=Glycine... [more]
tr|A0A0B2QRQ4|A0A0B2QRQ4_GLYSO4.465e-8081.25Dr1-associated corepressor like OS=Glycine soja OX... [more]
tr|A0A151U8Q7|A0A151U8Q7_CAJCA1.856e-7279.47Dr1-associated corepressor OS=Cajanus cajan OX=382... [more]
tr|A0A2K3NUG6|A0A2K3NUG6_TRIPR2.092e-5865.24Nuclear transcription factor Y subunit C-4-like pr... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003958Transcription factor CBF/NF-Y/archaeal histone domainPFAMPF00808CBFD_NFYB_HMFcoord: 17..80
e-value: 7.1E-19
score: 67.8
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 2..95
e-value: 1.2E-21
score: 79.1
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 16..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..215
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..215
NoneNo IPR availablePANTHERPTHR10252HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATEDcoord: 7..151

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_014638967.2_VrVC1973A-SNU_v1 ID=rna-XM_014638967.2_VrVC1973A-SNU_v1; Name=rna-XM_014638967.2; organism=Vigna radiata; type=mRNA; length=648bp
ATGATTGCTATGGCGGAGGAAGAAGAGAACGGGGTGTCGATTCAACTCGA
ATTCCCGAAGAGTCGGGTTAAGAAGATCATGACGCTGGACAAGGATGTGA
AGAGAGTGAGTTCAGAAGCATTGTTCCTGGTGTCGCGCTCCACAGAGTTG
TTCCTCCAATTTCTGGCTGAAAAATCTGCCAAAGTTGCTATCGAAAAGAA
ACGGAAGACCGTGAATCTGGAACACGTGAGAATGGCCGTTAAGAGGCACC
AACCAACCAGGGATTTTCTCCTCGATGATCTTCCGCCTCCGTCTGAGCCC
GCCAAGCCCGCCAAGCCCGATGGGCCTGCCAAGCCCGTGGTTCGGCCCAA
ACTTGATGAACCGCCATCTGGTACTCGTCGCATCGATCAGTTTTTCCGAA
AGCCAGAGCCTCAAAACCCAACCCAAGCTCAATCGCCTGAAAATCCAGCC
CAAGCTCAGTCGTCTGAAATTCCTGCCCAAGCTCAAGCGCCCGAAATACC
TTCTCAAGCTCAATCGCCTGAAGTTCCTTCAGAACCTCAATCGCCCGAAG
TTCCTTCTGAAACTCAATCGCCTAGAGTTCCTTCTGAATCTCAATCGCCT
GAAGCTCCTTCTCAAACTCAATTGCCATTACCCGTAGATGAGTCTTAG
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protein sequence of rna-XM_014638967.2_VrVC1973A-SNU_v1

>rna-XM_014638967.2_VrVC1973A-SNU_v1 ID=rna-XM_014638967.2_VrVC1973A-SNU_v1; Name=rna-XM_014638967.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=215bp
MIAMAEEEENGVSIQLEFPKSRVKKIMTLDKDVKRVSSEALFLVSRSTEL
FLQFLAEKSAKVAIEKKRKTVNLEHVRMAVKRHQPTRDFLLDDLPPPSEP
AKPAKPDGPAKPVVRPKLDEPPSGTRRIDQFFRKPEPQNPTQAQSPENPA
QAQSSEIPAQAQAPEIPSQAQSPEVPSEPQSPEVPSETQSPRVPSESQSP
EAPSQTQLPLPVDES
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mRNA from alignment at chr02:22217206..22218218+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_014638967.2_VrVC1973A-SNU_v1 ID=rna-XM_014638967.2_VrVC1973A-SNU_v1; Name=rna-XM_014638967.2; organism=Vigna radiata; type=mRNA; length=1013bp; location=Sequence derived from: chr02:22217206..22218218+ (Vigna radiata
TTCACCTTATACGGAAAGAGAGAGCTGAATGATTGCTATGGCGGAGGAAG AAGAGAACGGGGTGTCGATTCAACTCGAATTCCCGAAGAGTCGGGTTAAG AAGATCATGACGCTGGACAAGGATGTGAAGAGAGTGAGTTCAGAAGCATT GTTCCTGGTGTCGCGCTCCACAGAGTTGTTCCTCCAATTTCTGGCTGAAA AATCTGCCAAAGTTGCTATCGAAAAGAAACGGAAGACCGTGAATCTGGAA CACGTGAGAATGGCCGTTAAGAGGCACCAACCAACCAGGGATTTTCTCCT CGATGATCTTCCGCCTCCGTCTGAGCCCGCCAAGCCCGCCAAGCCCGATG GGCCTGCCAAGCCCGTGGTTCGGCCCAAACTTGATGAACCGCCATCTGGT ACTCGTCGCATCGATCAGTTTTTCCGAAAGCCAGAGCCTCAAAACCCAAC CCAAGCTCAATCGCCTGAAAATCCAGCCCAAGCTCAGTCGTCTGAAATTC CTGCCCAAGCTCAAGCGCCCGAAATACCTTCTCAAGCTCAATCGCCTGAA GTTCCTTCAGAACCTCAATCGCCCGAAGTTCCTTCTGAAACTCAATCGCC TAGAGTTCCTTCTGAATCTCAATCGCCTGAAGCTCCTTCTCAAACTCAAT TGCCATTACCCGTAGATGAGTCTTAGGGTTATGTTTGTTTATACTCCCAA TTAAGATTTTGTATCCGATCATAATCAGGTATAACATTTATCATTTAACA ATGCGAAAGAGggattataattatttatgtatgaaGATTGTTTGGTTATT GATATAGTTTTTGTTTGTATTCTTgacttgaaatatatattttgtgtggT CGAACAGCGCTAAAAAATTCTTCTGACGTCGTATCTAAACAGGTCCTTGG CAACTTTGCTTTGGTTTGCTTGTTTGTAGTTGGCAAAGATTATATAACGA CTTTGTAAGGGAGCAGTTATACCTTTCAGTACACGTTGAATGAGAATTTT TTACACTGTGAAA
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Coding sequence (CDS) from alignment at chr02:22217206..22218218+

>rna-XM_014638967.2_VrVC1973A-SNU_v1 ID=rna-XM_014638967.2_VrVC1973A-SNU_v1; Name=rna-XM_014638967.2; organism=Vigna radiata; type=CDS; length=648bp; location=Sequence derived from: chr02:22217206..22218218+ (Vigna radiata
ATGATTGCTATGGCGGAGGAAGAAGAGAACGGGGTGTCGATTCAACTCGA
ATTCCCGAAGAGTCGGGTTAAGAAGATCATGACGCTGGACAAGGATGTGA
AGAGAGTGAGTTCAGAAGCATTGTTCCTGGTGTCGCGCTCCACAGAGTTG
TTCCTCCAATTTCTGGCTGAAAAATCTGCCAAAGTTGCTATCGAAAAGAA
ACGGAAGACCGTGAATCTGGAACACGTGAGAATGGCCGTTAAGAGGCACC
AACCAACCAGGGATTTTCTCCTCGATGATCTTCCGCCTCCGTCTGAGCCC
GCCAAGCCCGCCAAGCCCGATGGGCCTGCCAAGCCCGTGGTTCGGCCCAA
ACTTGATGAACCGCCATCTGGTACTCGTCGCATCGATCAGTTTTTCCGAA
AGCCAGAGCCTCAAAACCCAACCCAAGCTCAATCGCCTGAAAATCCAGCC
CAAGCTCAGTCGTCTGAAATTCCTGCCCAAGCTCAAGCGCCCGAAATACC
TTCTCAAGCTCAATCGCCTGAAGTTCCTTCAGAACCTCAATCGCCCGAAG
TTCCTTCTGAAACTCAATCGCCTAGAGTTCCTTCTGAATCTCAATCGCCT
GAAGCTCCTTCTCAAACTCAATTGCCATTACCCGTAGATGAGTCTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR003958CBFA_NFYB_domain
IPR009072Histone-fold
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity