Va03G067640.1

Transcript Overview
NameVa03G067640.1
Unique NameVa03G067640.1_Jingnong6
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length363
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr3chromosomeChr3:40729669..40730031 +Vigna angularis cv. Jingnong6 genome v1.7.1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
avjavjL237Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanR379Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaR439Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
avjccR0778Cajanus cajan Asha genome v1.0Cajanus cajan
avjpsR466Pisum sativum Cameor genome v1aPisum sativum
avjpsR472Pisum sativum Cameor genome v1aPisum sativum
avjpvR452Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
avjvfhR489Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
avjpvR510Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
avjvfhR515Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
avjvuR337Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
avjvuR403Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
avjvssR550Vicia sativa cv. Studenica genome v1.0Vicia sativa
avjvssR570Vicia sativa cv. Studenica genome v1.0Vicia sativa
avjcarR417Cicer arietinum
avjcarR452Cicer arietinum
avjvumR366Vigna umbellata FF25 genome v1.0Vigna umbellata
avjccaR444Cajanus cajan cv. Asha genome v2.0Cajanus cajan
avjccaR450Cajanus cajan cv. Asha genome v2.0Cajanus cajan
avjvumR424Vigna umbellata FF25 genome v1.0Vigna umbellata
avjvvaR437Vicia villosa cv. AU Merit genome v1.0Vicia villosa
avjvvaR513Vicia villosa cv. AU Merit genome v1.0Vicia villosa
avjvasR379Vigna angularis cv. Shumari genome v1.a1Vigna angularis
avjvasR397Vigna angularis cv. Shumari genome v1.a1Vigna angularis
avjvstR397Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
avjvstR420Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
avjvunR282Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
avjpvfR450Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
avjvunR339Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Va03G067640Va03G067640_Jingnong6Vigna angularisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Va03G067640.1:exon_1_Jingnong6Va03G067640.1:exon_1_Jingnong6Vigna angularisexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Va03G067640.1_Jingnong6-cdsVa03G067640.1_Jingnong6-cds-Chr3_Jingnong6:40729669..40730031Vigna angularisCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Va03G067640.1_Jingnong6Va03G067640.1_Jingnong6Vigna angularispolypeptide
Va03G067640.1_Jingnong6Va03G067640.1_Jingnong6-proteinVigna angularispolypeptide


Homology
BLAST of Va03G067640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9UJ18|A0A0L9UJ18_PHAAN (CASP-like protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g049900 PE=4 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 4.470e-68
Identity = 103/120 (85.83%), Postives = 105/120 (87.50%), Query Frame = 0
Query:    1 MELATGKSTLLRNVLTQLLIIGLLIVIVRFAYVITLAGEACTLGDFCFFSSEVRSASVAEAAPERYASKDWINNVRFYSYVFMEIHQSIPSLRTPRSSITATSMAAPFATTTHSHPEPGP 120
            ME ATGK  LLRNVLTQLLIIGLLIV VRFAYVITL GE+CTL DFCFFSSEVRS SVA  APERYASKDWINNVRFYS +F EI QSIPSLRTPRSSITATSM APFA TTHSH EPGP
Sbjct:    1 MEPATGKPALLRNVLTQLLIIGLLIVTVRFAYVITLTGESCTLDDFCFFSSEVRSVSVAATAPERYASKDWINNVRFYSSMFQEIRQSIPSLRTPRSSITATSMTAPFAATTHSHSEPGP 120          
BLAST of Va03G067640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9UVL2|A0A0L9UVL2_PHAAN (CASP-like protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan07g047500 PE=4 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.143e-63
Identity = 99/120 (82.50%), Postives = 104/120 (86.67%), Query Frame = 0
Query:    1 MELATGKSTLLRNVLTQLLIIGLLIVIVRFAYVITLAGEACTLGDFCFFSSEVRSASVAEAAPERYASKDWINNVRFYSYVFMEIHQSIPSLRTPRSSITATSMAAPFATTTHSHPEPGP 120
            ME  TGK TLLRNVLTQLLIIGLLIV VRFAYVIT+AGE+CTL DFCFFSSEVRSASV   APERYASKD IN VRFYS +F EI Q IPSLRTP+SSITATSMAAPFA TTH+H EPGP
Sbjct:    1 MEPVTGKPTLLRNVLTQLLIIGLLIVTVRFAYVITIAGESCTLDDFCFFSSEVRSASVVATAPERYASKDRINIVRFYSSMFQEIRQYIPSLRTPQSSITATSMAAPFAATTHNHSEPGP 120          
BLAST of Va03G067640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TKK8|A0A0L9TKK8_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan01g025300 PE=4 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.362e-63
Identity = 99/120 (82.50%), Postives = 102/120 (85.00%), Query Frame = 0
Query:    1 MELATGKSTLLRNVLTQLLIIGLLIVIVRFAYVITLAGEACTLGDFCFFSSEVRSASVAEAAPERYASKDWINNVRFYSYVFMEIHQSIPSLRTPRSSITATSMAAPFATTTHSHPEPGP 120
            ME ATGK  LLRNVLT LLIIGLLIV VRFAY ITLAGE+CTL DFCFFSSEV SASV    PERYASKDWIN +RFYS +F EI QSIPSLRTPRSSITATSMAAPFA TTHSH EPGP
Sbjct:    1 MEPATGKRALLRNVLTPLLIIGLLIVTVRFAYAITLAGESCTLDDFCFFSSEVCSASVVTTTPERYASKDWINIIRFYSSMFQEIRQSIPSLRTPRSSITATSMAAPFAATTHSHSEPGP 120          
BLAST of Va03G067640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3T518|A0A0S3T518_PHAAN (CASP-like protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.10G156700 PE=4 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 6.911e-60
Identity = 95/115 (82.61%), Postives = 98/115 (85.22%), Query Frame = 0
Query:    6 GKSTLLRNVLTQLLIIGLLIVIVRFAYVITLAGEACTLGDFCFFSSEVRSASVAEAAPERYASKDWINNVRFYSYVFMEIHQSIPSLRTPRSSITATSMAAPFATTTHSHPEPGP 120
            GK  LLRNVLTQLLIIGLLIV VRFAYVITLAGE+CTL DF FFSSEVRSASVA  A E YASKDWINNVRFY  +F EI +SIPSLRTPRSSITAT MAAPF  TTHSH EPGP
Sbjct:   26 GKPALLRNVLTQLLIIGLLIVTVRFAYVITLAGESCTLDDFWFFSSEVRSASVAATALEHYASKDWINNVRFYLSMFQEIRKSIPSLRTPRSSITATFMAAPFEATTHSHSEPGP 140          
BLAST of Va03G067640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3VY35|A0A1S3VY35_VIGRR (Uncharacterized protein LOC106779633 OS=Vigna radiata var. radiata OX=3916 GN=LOC106779633 PE=4 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.534e-36
Identity = 71/99 (71.72%), Postives = 77/99 (77.78%), Query Frame = 0
Query:    1 MELATGKSTLLRNVLTQLLIIGLLIVIVRFAYVITLAGEACTLGDFCFFSSE--------------VRSASVAEAAPERYASKDWINNVRFYSYVFMEI 85
            ME ATGK  LLRNVLT+LLI+GLLIVIVRFAYVITLAGE+CTLGDFCFFSS               VRSASV  AAPERYASKDWIN+VRFYS VF ++
Sbjct:    1 MEPATGKPGLLRNVLTRLLIVGLLIVIVRFAYVITLAGESCTLGDFCFFSSSLNLAIAGPGSGALAVRSASVGAAAPERYASKDWINSVRFYSSVFQDL 99          
BLAST of Va03G067640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MQD5|A0A4D6MQD5_VIGUN (S-adenosyl-L-methionine-dependent methyltransferase OS=Vigna unguiculata OX=3917 GN=DEO72_LG8g1272 PE=4 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.171e-32
Identity = 67/99 (67.68%), Postives = 72/99 (72.73%), Query Frame = 0
Query:    1 MELATGKSTLLRNVLTQLLIIGLLIVIVRFAYVITLAGEACTLGDFCFFSS--------------EVRSASVAEAAPERYASKDWINNVRFYSYVFMEI 85
            ME ATGK   LRNVLT+LLI GLLIVIVRFAYVITLAGE+CTLGDFCFFS                VRSAS   AAPERYASKDWI+ VRFYS VF ++
Sbjct:    1 MEPATGKPGFLRNVLTRLLIFGLLIVIVRFAYVITLAGESCTLGDFCFFSPPLNLAIAGTRSGALAVRSASGGAAAPERYASKDWISGVRFYSSVFQDL 99          
BLAST of Va03G067640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A8T0L9F5|A0A8T0L9F5_PHAAN (CASP-like protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0035210 PE=4 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.218e-28
Identity = 55/63 (87.30%), Postives = 56/63 (88.89%), Query Frame = 0
Query:    1 MELATGKSTLLRNVLTQLLIIGLLIVIVRFAYVITLAGEACTLGDFCFFSSEVRSASVAEAAP 63
            ME ATGK  LLRNVLTQLLIIGLLIV VRFAYVITLAGE+CTL DFCFFSSEVRSASVA  AP
Sbjct:   22 MESATGKPALLRNVLTQLLIIGLLIVTVRFAYVITLAGESCTLDDFCFFSSEVRSASVAPTAP 84          
BLAST of Va03G067640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SJF8|A0A0S3SJF8_PHAAN (Methyltransferase type 11 domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G187000 PE=4 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 6.089e-27
Identity = 51/58 (87.93%), Postives = 55/58 (94.83%), Query Frame = 0
Query:   28 VRFAYVITLAGEACTLGDFCFFSSEVRSASVAEAAPERYASKDWINNVRFYSYVFMEI 85
            VRFAYVITLAGE+CTLGDFCFFSSEVRSASV EAAPERYASKDWIN+VRFYS VF ++
Sbjct:   25 VRFAYVITLAGESCTLGDFCFFSSEVRSASVGEAAPERYASKDWINSVRFYSSVFQDL 82          
BLAST of Va03G067640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9UJM4|A0A0L9UJM4_PHAAN (Methyltransferase type 11 domain-containing protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0209370 PE=4 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 6.089e-27
Identity = 51/58 (87.93%), Postives = 55/58 (94.83%), Query Frame = 0
Query:   28 VRFAYVITLAGEACTLGDFCFFSSEVRSASVAEAAPERYASKDWINNVRFYSYVFMEI 85
            VRFAYVITLAGE+CTLGDFCFFSSEVRSASV EAAPERYASKDWIN+VRFYS VF ++
Sbjct:   25 VRFAYVITLAGESCTLGDFCFFSSEVRSASVGEAAPERYASKDWINSVRFYSSVFQDL 82          
BLAST of Va03G067640.1 vs. UniProtKB/TrEMBL
Match: tr|V7ALZ9|V7ALZ9_PHAVU (Methyltransferase type 11 domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_010G062900g PE=4 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.614e-25
Identity = 59/99 (59.60%), Postives = 66/99 (66.67%), Query Frame = 0
Query:    1 MELATGKSTLLRNVLTQLLIIGLLIVIVRFAYVITLAGEACTLGDFCFFSSEVRSA--------------SVAEAAPERYASKDWINNVRFYSYVFMEI 85
            ME   GK   LRNVL +LLI GL IVIVRFAYVITLAGE+CTLGDFCFFS  +  A              S   AAPERYASK+WI+ VRFYS VF ++
Sbjct:    1 MEPTAGKPGFLRNVLIRLLIFGLFIVIVRFAYVITLAGESCTLGDFCFFSPSLNLAIAGTRSGALAARAASGGAAAPERYASKEWISGVRFYSSVFQDL 99          
BLAST of Va03G067640.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:263709-265250 REVERSE LENGTH=513)

HSP 1 Score: 88.5817 bits (218), Expect = 1.861e-21
Identity = 38/101 (37.62%), Postives = 61/101 (60.40%), Query Frame = 0
Query:    1 MELATGKSTLLRNVLTQLLIIGLLIVIVRFAYVITLAGEACTLGDFCFF----------------SSEVRSASVAEAAPERYASKDWINNVRFYSYVFMEI 85
            ME + GK + LRN++ ++L+ G+LI++VRFAYV+T+ GE+C  GDFCFF                SS + +        + Y ++DWI +V+FYS +F ++
Sbjct:    1 METSMGKPSFLRNIMVRVLLFGVLIIVVRFAYVVTITGESCNRGDFCFFSLPENLNFVISGAASGSSAIDAIRSTSPGDDLYTTRDWIKSVQFYSSIFQDL 101          
The following BLAST results are available for this feature:
BLAST of Va03G067640.1 vs. UniProtKB/TrEMBL
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A0L9UJ18|A0A0L9UJ18_PHAAN4.470e-6885.83CASP-like protein OS=Phaseolus angularis OX=3914 G... [more]
tr|A0A0L9UVL2|A0A0L9UVL2_PHAAN1.143e-6382.50CASP-like protein OS=Phaseolus angularis OX=3914 G... [more]
tr|A0A0L9TKK8|A0A0L9TKK8_PHAAN1.362e-6382.50Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|A0A0S3T518|A0A0S3T518_PHAAN6.911e-6082.61CASP-like protein OS=Vigna angularis var. angulari... [more]
tr|A0A1S3VY35|A0A1S3VY35_VIGRR5.534e-3671.72Uncharacterized protein LOC106779633 OS=Vigna radi... [more]
tr|A0A4D6MQD5|A0A4D6MQD5_VIGUN2.171e-3267.68S-adenosyl-L-methionine-dependent methyltransferas... [more]
tr|A0A8T0L9F5|A0A8T0L9F5_PHAAN1.218e-2887.30CASP-like protein OS=Phaseolus angularis OX=3914 G... [more]
tr|A0A0S3SJF8|A0A0S3SJF8_PHAAN6.089e-2787.93Methyltransferase type 11 domain-containing protei... [more]
tr|A0A0L9UJM4|A0A0L9UJM4_PHAAN6.089e-2787.93Methyltransferase type 11 domain-containing protei... [more]
tr|V7ALZ9|V7ALZ9_PHAVU3.614e-2559.60Methyltransferase type 11 domain-containing protei... [more]
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BLAST of Va03G067640.1 vs. UniProtKB/TrEMBL
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Va03G067640.1 vs. Araport11
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs arabidopsis Araport11)
Total hits: 1
Match NameE-valueIdentityDescription
|1.861e-2137.62Symbols: no symbol available | no full name availa... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna angularis cv. Jingnong6 genome v1.7.1
Date Performed: 2024-05-23
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR44843METHYLTRANSFERASEcoord: 1..85

Sequences
The following sequences are available for this feature:

mRNA sequence

>Va03G067640.1_Jingnong6 ID=Va03G067640.1_Jingnong6; Name=Va03G067640.1; organism=Vigna angularis; type=mRNA; length=363bp
ATGGAGCTTGCCACAGGGAAGTCGACCTTACTCAGAAATGTTTTGACACA
ATTACTCATCATCGGCCTTCTCATCGTTATCGTAAGGTTTGCTTACGTCA
TCACCCTCGCTGGAGAGGCCTGCACCCTCGGCGACTTCTGCTTCTTCTCC
TCGGAGGTTCGCTCCGCCTCCGTCGCCGAGGCGGCACCCGAGCGCTACGC
TAGCAAGGATTGGATCAACAATGTTCGGTTTTACTCGTATGTGTTCATGG
AAATCCACCAGTCCATCCCAAGCCTGAGAACTCCACGATCATCCATCACC
GCAACCTCTATGGCTGCTCCGTTTGCAACAACCACCCATAGTCACCCCGA
ACCAGGACCTTAA
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protein sequence of Va03G067640.1_Jingnong6

>Va03G067640.1_Jingnong6 ID=Va03G067640.1_Jingnong6; Name=Va03G067640.1_Jingnong6; organism=Vigna angularis; type=polypeptide; length=120bp
MELATGKSTLLRNVLTQLLIIGLLIVIVRFAYVITLAGEACTLGDFCFFS
SEVRSASVAEAAPERYASKDWINNVRFYSYVFMEIHQSIPSLRTPRSSIT
ATSMAAPFATTTHSHPEPGP
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mRNA from alignment at Chr3:40729669..40730031+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Va03G067640.1_Jingnong6 ID=Va03G067640.1_Jingnong6; Name=Va03G067640.1; organism=Vigna angularis; type=mRNA; length=363bp; location=Sequence derived from: Chr3:40729669..40730031+ (Vigna angularis
ATGGAGCTTGCCACAGGGAAGTCGACCTTACTCAGAAATGTTTTGACACA ATTACTCATCATCGGCCTTCTCATCGTTATCGTAAGGTTTGCTTACGTCA TCACCCTCGCTGGAGAGGCCTGCACCCTCGGCGACTTCTGCTTCTTCTCC TCGGAGGTTCGCTCCGCCTCCGTCGCCGAGGCGGCACCCGAGCGCTACGC TAGCAAGGATTGGATCAACAATGTTCGGTTTTACTCGTATGTGTTCATGG AAATCCACCAGTCCATCCCAAGCCTGAGAACTCCACGATCATCCATCACC GCAACCTCTATGGCTGCTCCGTTTGCAACAACCACCCATAGTCACCCCGA ACCAGGACCTTAA
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Coding sequence (CDS) from alignment at Chr3:40729669..40730031+

>Va03G067640.1_Jingnong6 ID=Va03G067640.1_Jingnong6; Name=Va03G067640.1; organism=Vigna angularis; type=CDS; length=363bp; location=Sequence derived from: Chr3:40729669..40730031+ (Vigna angularis
ATGGAGCTTGCCACAGGGAAGTCGACCTTACTCAGAAATGTTTTGACACA
ATTACTCATCATCGGCCTTCTCATCGTTATCGTAAGGTTTGCTTACGTCA
TCACCCTCGCTGGAGAGGCCTGCACCCTCGGCGACTTCTGCTTCTTCTCC
TCGGAGGTTCGCTCCGCCTCCGTCGCCGAGGCGGCACCCGAGCGCTACGC
TAGCAAGGATTGGATCAACAATGTTCGGTTTTACTCGTATGTGTTCATGG
AAATCCACCAGTCCATCCCAAGCCTGAGAACTCCACGATCATCCATCACC
GCAACCTCTATGGCTGCTCCGTTTGCAACAACCACCCATAGTCACCCCGA
ACCAGGACCTTAA
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