Va07G066340.1

Transcript Overview
NameVa07G066340.1
Unique NameVa07G066340.1_Jingnong6
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length1110
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr7chromosomeChr7:39183833..39187072 -Vigna angularis cv. Jingnong6 genome v1.7.1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
avjavjL287Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjL0137Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anavjL0366Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anavjL0421Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjcaR733Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
avjcaR747Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
avjccR1200Cajanus cajan Asha genome v1.0Cajanus cajan
avjcaR782Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anavjL0829Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccR1266Cajanus cajan Asha genome v1.0Cajanus cajan
anavjL0840Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjpsR783Pisum sativum Cameor genome v1aPisum sativum
avjvfhR810Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
avjvfhR818Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
avjvssR845Vicia sativa cv. Studenica genome v1.0Vicia sativa
avjvssR885Vicia sativa cv. Studenica genome v1.0Vicia sativa
avjvssR900Vicia sativa cv. Studenica genome v1.0Vicia sativa
avjvumR621Vigna umbellata FF25 genome v1.0Vigna umbellata
avjvumR631Vigna umbellata FF25 genome v1.0Vigna umbellata
avjvasR608Vigna angularis cv. Shumari genome v1.a1Vigna angularis
avjvasR617Vigna angularis cv. Shumari genome v1.a1Vigna angularis
avjpvfR778Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
avjpvfR829Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Vum_03G01797.1Vigna umbellata FF25 genome v1.0Vigna umbellata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigan.03G256700.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Va07G066340Va07G066340_Jingnong6Vigna angularisgene


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Va07G066340.1:three_prime_UTR_1_Jingnong6Va07G066340.1:three_prime_UTR_1_Jingnong6Vigna angularisthree_prime_UTR
Va07G066340.1:three_prime_UTR_2_Jingnong6Va07G066340.1:three_prime_UTR_2_Jingnong6Vigna angularisthree_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Va07G066340.1:exon_1_Jingnong6Va07G066340.1:exon_1_Jingnong6Vigna angularisexon
Va07G066340.1:exon_2_Jingnong6Va07G066340.1:exon_2_Jingnong6Vigna angularisexon
Va07G066340.1:exon_3_Jingnong6Va07G066340.1:exon_3_Jingnong6Vigna angularisexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Va07G066340.1_Jingnong6-cdsVa07G066340.1_Jingnong6-cds-Chr7_Jingnong6:39184975..39185856Vigna angularisCDS
Va07G066340.1_Jingnong6-cdsVa07G066340.1_Jingnong6-cds-Chr7_Jingnong6:39186737..39186964Vigna angularisCDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Va07G066340.1:five_prime_UTR_1_Jingnong6Va07G066340.1:five_prime_UTR_1_Jingnong6Vigna angularisfive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Va07G066340.1_Jingnong6Va07G066340.1_Jingnong6Vigna angularispolypeptide
Va07G066340.1_Jingnong6Va07G066340.1_Jingnong6-proteinVigna angularispolypeptide


Homology
BLAST of Va07G066340.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3RPR0|A0A0S3RPR0_PHAAN (CCHC-type domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.03G256700 PE=4 SV=1)

HSP 1 Score: 761.911 bits (1966), Expect = 0.000e+0
Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0
Query:    1 MTRASIDLFSQKTKAKRRRSTCERETQKEALALATTVRRRRRGVLPPRHHLLQTINTHFPLLGTLKFGDLKLLIFQLCLIFHIIKGLVFFFLGNLGLEKLWEFSSKVAGAMALEEGKVKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSLMESSRSNSGSALSVENRGRNSQKGCNQGRGRSKSRRRSQTKVRNDITCWNCQKNGHFKNQCRASRKNNN 369
            MTRASIDLFSQKTKAKRRRSTCERETQKEALALATTVRRRRRGVLPPRHHLLQTINTHFPLLGTLKFGDLKLLIFQLCLIFHIIKGLVFFFLGNLGLEKLWEFSSKVAGAMALEEGKVKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSLMESSRSNSGSALSVENRGRNSQKGCNQGRGRSKSRRRSQTKVRNDITCWNCQKNGHFKNQCRASRKNNN
Sbjct:    1 MTRASIDLFSQKTKAKRRRSTCERETQKEALALATTVRRRRRGVLPPRHHLLQTINTHFPLLGTLKFGDLKLLIFQLCLIFHIIKGLVFFFLGNLGLEKLWEFSSKVAGAMALEEGKVKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSLMESSRSNSGSALSVENRGRNSQKGCNQGRGRSKSRRRSQTKVRNDITCWNCQKNGHFKNQCRASRKNNN 369          
BLAST of Va07G066340.1 vs. UniProtKB/TrEMBL
Match: tr|A0A8T0K2B7|A0A8T0K2B7_PHAAN (CCHC-type domain-containing protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0223410 PE=4 SV=1)

HSP 1 Score: 761.911 bits (1966), Expect = 0.000e+0
Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0
Query:    1 MTRASIDLFSQKTKAKRRRSTCERETQKEALALATTVRRRRRGVLPPRHHLLQTINTHFPLLGTLKFGDLKLLIFQLCLIFHIIKGLVFFFLGNLGLEKLWEFSSKVAGAMALEEGKVKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSLMESSRSNSGSALSVENRGRNSQKGCNQGRGRSKSRRRSQTKVRNDITCWNCQKNGHFKNQCRASRKNNN 369
            MTRASIDLFSQKTKAKRRRSTCERETQKEALALATTVRRRRRGVLPPRHHLLQTINTHFPLLGTLKFGDLKLLIFQLCLIFHIIKGLVFFFLGNLGLEKLWEFSSKVAGAMALEEGKVKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSLMESSRSNSGSALSVENRGRNSQKGCNQGRGRSKSRRRSQTKVRNDITCWNCQKNGHFKNQCRASRKNNN
Sbjct:    1 MTRASIDLFSQKTKAKRRRSTCERETQKEALALATTVRRRRRGVLPPRHHLLQTINTHFPLLGTLKFGDLKLLIFQLCLIFHIIKGLVFFFLGNLGLEKLWEFSSKVAGAMALEEGKVKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSLMESSRSNSGSALSVENRGRNSQKGCNQGRGRSKSRRRSQTKVRNDITCWNCQKNGHFKNQCRASRKNNN 369          
BLAST of Va07G066340.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151RTE7|A0A151RTE7_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=3821 GN=KK1_032664 PE=4 SV=1)

HSP 1 Score: 365.925 bits (938), Expect = 2.579e-121
Identity = 184/259 (71.04%), Postives = 212/259 (81.85%), Query Frame = 0
Query:  111 MALEEGKVKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSLMESSRSNSGSALSVENRGRNSQKGCNQGRGRSKSRRRSQTKVRNDITCWNCQKNGHFKNQCRASRKNNN 369
            MALEEGKVKIEKFDG DFGFWKMQIEDYLYQKKLY PL GEKP+DM+Q +W LLDRQALGVIRLTLAKNVA NI+N+KTTA LM+ LS+MYEKPS ANKV+++RRL NLKM EGN V +HI+ FNTI+A L S+QI F+DE+KAL+LLSSLPESW ATVT  S+ A ++KLK ++I DLILSEDV RR   E S S S SAL+ E+RGR +QKG N  RGRSKSR + Q K RNDI CWNC K GHF NQC+A +KN N
Sbjct:    1 MALEEGKVKIEKFDGKDFGFWKMQIEDYLYQKKLYQPLIGEKPDDMKQEEWNLLDRQALGVIRLTLAKNVAFNIVNEKTTASLMKTLSDMYEKPSAANKVHIMRRLFNLKMGEGNLVINHINDFNTILAMLESVQIKFEDEVKALILLSSLPESWAATVTAVSSSARDNKLKLNDIRDLILSEDVRRRDSEEPSSSTSSSALNTESRGRTTQKGYNS-RGRSKSRAKGQPKFRNDIVCWNCDKRGHFTNQCKAPKKNKN 258          
BLAST of Va07G066340.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151QVU7|A0A151QVU7_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=3821 GN=KK1_044546 PE=4 SV=1)

HSP 1 Score: 366.696 bits (940), Expect = 1.885e-120
Identity = 184/259 (71.04%), Postives = 212/259 (81.85%), Query Frame = 0
Query:  111 MALEEGKVKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSLMESSRSNSGSALSVENRGRNSQKGCNQGRGRSKSRRRSQTKVRNDITCWNCQKNGHFKNQCRASRKNNN 369
            MALEEGKVKIEKFDG DFGFWKMQIEDYLYQKKLY PL GEKP+DM+Q +W LLDRQALGVIRLTLAKNVA NI+N+KTTA LM+ LS+MYEKPS ANKV+++RRL NLKM EGN V +HI+ FNTI+A L S+QI F+DE+KAL+LLSSLPESW ATVT  S+ A ++KLK ++I DLILSEDV RR   E S S S SAL+ E+RGR +QKG N  RGRSKSR + Q K RNDI CWNC K GHF NQC+A +KN N
Sbjct:    1 MALEEGKVKIEKFDGKDFGFWKMQIEDYLYQKKLYQPLIGEKPDDMKQEEWNLLDRQALGVIRLTLAKNVAFNIVNEKTTASLMKTLSDMYEKPSAANKVHIMRRLFNLKMGEGNLVINHINDFNTILAMLESVQIKFEDEVKALILLSSLPESWAATVTAVSSSARDNKLKLNDIRDLILSEDVRRRDSEEPSSSTSSSALNTESRGRTTQKGYNS-RGRSKSRAKGQPKFRNDIVCWNCDKRGHFTNQCKAPKKNKN 258          
BLAST of Va07G066340.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4Y1RMK2|A0A4Y1RMK2_PRUDU (CCHC-type domain-containing protein OS=Prunus dulcis OX=3755 GN=Prudu_016848 PE=4 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 2.993e-102
Identity = 156/267 (58.43%), Postives = 198/267 (74.16%), Query Frame = 0
Query:  111 MALEEGKVKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSLMESSRSNSGSALSVENRGRNSQKGCNQG----RGRSKSRRRSQTKVRND-----ITCWNCQKNGHFKNQCRASRKNN 368
            MA +EGK+KIEKFDG+DFGFWKMQIEDYLYQKKLY PL   KP  M   DW LLDRQALGVIRLTL++NVA NI  +KTTA LM ALS+MYEKPS +NKV+L+RRL NL+M EG SV  H+++ NT+  QL+S+ I FD+E++AL+LLSSLPESW ATVT  S+ + ++KL FD++ DL+LSE++ RR   ES  S++ S L  E+RGRNS +G  +G    RGRSK RR       N      + CWNC K GH+KNQC+++ K++
Sbjct:    1 MAADEGKMKIEKFDGADFGFWKMQIEDYLYQKKLYQPLSENKPEGMNDEDWTLLDRQALGVIRLTLSRNVAFNIAKEKTTAGLMAALSSMYEKPSASNKVHLMRRLFNLRMTEGASVAQHLNELNTVTTQLSSVGIEFDEEVRALILLSSLPESWNATVTAVSSSSGSNKLTFDDVRDLVLSEEIRRR---ESGESSTSSVLHTESRGRNSTRGNGRGRSNYRGRSKDRRSKSRNPNNSHSSKTVECWNCGKIGHYKNQCKSASKDH 264          
BLAST of Va07G066340.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4Y1RCM7|A0A4Y1RCM7_PRUDU (CCHC-type domain-containing protein OS=Prunus dulcis OX=3755 GN=Prudu_012406 PE=4 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 6.408e-102
Identity = 156/267 (58.43%), Postives = 198/267 (74.16%), Query Frame = 0
Query:  111 MALEEGKVKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSLMESSRSNSGSALSVENRGRNSQKGCNQG----RGRSKSRRRSQTKVRND-----ITCWNCQKNGHFKNQCRASRKNN 368
            MA +EGK+KIEKFDG+DFGFWKMQIEDYLYQKKLY PL   KP  M   DW LLDRQALGVIRLTL++NVA NI  +KTTA LM ALS+MYEKPS +NKV+L+RRL NL+M EG SV  H+++ NT+  QL+S+ I FD+E++AL+LLSSLPESW ATVT  S+ + ++KL FD++ DL+LSE++ RR   ES  S++ S L  E+RGRNS +G  +G    RGRSK RR       N      + CWNC K GH+KNQC+++ K++
Sbjct:    1 MAADEGKMKIEKFDGADFGFWKMQIEDYLYQKKLYQPLSENKPEGMNDEDWTLLDRQALGVIRLTLSRNVAFNIAKEKTTAGLMAALSSMYEKPSASNKVHLMRRLFNLRMTEGASVAQHLNELNTVTTQLSSVGIEFDEEVRALILLSSLPESWNATVTAVSSSSGSNKLTFDDVRDLVLSEEIRRR---ESGESSTSSVLHTESRGRNSTRGNGRGRSNYRGRSKDRRSKSRNPNNSHSSKTVECWNCGKIGHYKNQCKSASKDH 264          
BLAST of Va07G066340.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4Y1R3K4|A0A4Y1R3K4_PRUDU (CCHC-type domain-containing protein OS=Prunus dulcis OX=3755 GN=Prudu_008085 PE=4 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 5.822e-101
Identity = 156/267 (58.43%), Postives = 198/267 (74.16%), Query Frame = 0
Query:  111 MALEEGKVKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSLMESSRSNSGSALSVENRGRNSQKGCNQG----RGRSKSRRRSQTKVRND-----ITCWNCQKNGHFKNQCRASRKNN 368
            MA +EGK+KIEKFDG+DFGFWKMQIEDYLYQKKLY PL   KP  M   DW LLDRQALGVIRLTL++NVA NI  +KTTA LM ALS+MYEKPS +NKV+L+RRL NL+M EG SV  H+++ NT+  QL+S+ I FD+E++AL+LLSSLPESW ATVT  S+ + ++KL FD++ DL+LSE++ RR   ES  S++ S L  E+RGRNS +G  +G    RGRSK RR       N      + CWNC K GH+KNQC+++ K++
Sbjct:    1 MAADEGKMKIEKFDGADFGFWKMQIEDYLYQKKLYQPLSENKPEGMNDEDWTLLDRQALGVIRLTLSRNVAFNIAKEKTTAGLMAALSSMYEKPSASNKVHLMRRLFNLRMTEGASVAQHLNELNTVTTQLSSVGIEFDEEVRALILLSSLPESWNATVTAVSSSSGSNKLTFDDVRDLVLSEEIRRR---ESGESSTSSVLHTESRGRNSTRGNGRGRSNYRGRSKDRRSKSRNPNNSHSSKTVECWNCGKIGHYKNQCKSASKDH 264          
BLAST of Va07G066340.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A3CMG8|A0A6A3CMG8_HIBSY (CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00004205pilonHSYRG00041 PE=4 SV=1)

HSP 1 Score: 330.487 bits (846), Expect = 2.059e-100
Identity = 160/258 (62.02%), Postives = 200/258 (77.52%), Query Frame = 0
Query:  110 AMALEEGKVKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSLMESSRSNSGSALSVENRGRNSQKGCNQGRGRSKSRRRSQTKVRNDITCWNCQKNGHFKNQCRASRKN 367
            AMA +EGKVKIEKFDG+DFGFWKMQIED+LYQK LY PL G++P  M+  DW LLDRQALGVIRLTL++NVA NI  +KTTA LM ALS+MYEKPS +NKV+L+RRL NL+M EG SV  H+++ NTI  QL+S++I FDDE++AL+LLSSLP+SW ATVT  S+ + NSKLKFD++ DL+LSE++ RR   ES  +++ SAL  E+RGR S++  N  RGRSKSRR        D TC+NC K GHFK  CRA +K+
Sbjct:   14 AMAADEGKVKIEKFDGADFGFWKMQIEDFLYQKNLYQPLSGKQPEGMKNEDWALLDRQALGVIRLTLSRNVAFNIAKEKTTAGLMAALSSMYEKPSASNKVHLMRRLFNLRMTEGASVAQHLNELNTITTQLSSVEIEFDDEVRALILLSSLPDSWNATVTAVSSSSGNSKLKFDDVRDLVLSEEIRRR---ESGEASTSSALHTESRGRTSERNSN--RGRSKSRRGKSRTGNKDFTCYNCGKKGHFKRDCRALKKD 266          
BLAST of Va07G066340.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A2WXJ4|A0A6A2WXJ4_HIBSY (F-box family protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00116958pilonHSYRG00301 PE=4 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 9.508e-100
Identity = 162/260 (62.31%), Postives = 201/260 (77.31%), Query Frame = 0
Query:  108 AGAMALEEGKVKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSLMESSRSNSGSALSVENRGRNSQKGCNQGRGRSKSRRRSQTKVRNDITCWNCQKNGHFKNQCRASRKN 367
             GAMA +EGKVKIEKFDG+DFGFWKMQIED+LYQK LY PL G++P  M+  DW LLDRQALGVIRLTL++NVA NI  +KTTA LM ALS+MYEKPS +NKV+L+RRL NL+M EG SV  H+++ NTI  QL+S++I FDDE++AL+LLSSLP+SW ATVT  S+ + NSKLKFD++ DL+LSE++ RR   ES  +++ SAL  E+RGR S++  N  RGRSKSRR        D TC+NC K GHFK  CRA +KN
Sbjct:  474 VGAMAADEGKVKIEKFDGADFGFWKMQIEDFLYQKNLYQPLSGKQPEGMKDEDWALLDRQALGVIRLTLSRNVAFNIAKEKTTAGLMAALSSMYEKPSASNKVHLMRRLFNLRMAEGASVAQHLNELNTITTQLSSVEIEFDDEVRALILLSSLPDSWNATVTAVSSSSGNSKLKFDDVRDLVLSEEIRRR---ESGEASTSSALHTESRGRTSER--NSNRGRSKSRRGKSRTGNKDFTCYNCGKKGHFKRDCRAPKKN 728          
BLAST of Va07G066340.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A2ZX47|A0A6A2ZX47_HIBSY (RING-type E3 ubiquitin transferase OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110683pilonHSYRG00417 PE=4 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 8.407e-99
Identity = 162/260 (62.31%), Postives = 199/260 (76.54%), Query Frame = 0
Query:  108 AGAMALEEGKVKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSLMESSRSNSGSALSVENRGRNSQKGCNQGRGRSKSRRRSQTKVRNDITCWNCQKNGHFKNQCRASRKN 367
             GAMA +EGKVKIEKFDG+DFGFWKMQIED+LYQK LY PL G++P  M+  DW LLDRQALGVIRLTL++NVA NI  +KTT  LM ALS+MYEKPS +NKV+L+RRL NL+M +G SV  H++K NTI  QL+SM+I FDDE++AL+LLSSLP+SW ATVT  ++ + NSKLKFD++ DL+LSE++ RR   E+S S   SAL  E+RGR S++  N  RGRSKSRR          TC+NC K GHFK  CRAS+KN
Sbjct:  321 VGAMAADEGKVKIEKFDGADFGFWKMQIEDFLYQKNLYQPLSGKQPEGMKNEDWALLDRQALGVIRLTLSRNVAFNIAKEKTTVGLMAALSSMYEKPSTSNKVHLMRRLFNLRMAKGASVAQHLNKLNTITTQLSSMEIEFDDEVRALILLSSLPDSWNATVTAVNSSSGNSKLKFDDVRDLVLSEEIRRREAGEASTS---SALHTESRGRTSER--NSNRGRSKSRRGKSRTCNKGFTCYNCGKKGHFKRDCRASKKN 575          
BLAST of Va07G066340.1 vs. UniProtKB/Swiss-Prot
Match: Retrovirus-related (Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.931e-38
Identity = 93/256 (36.33%), Postives = 147/256 (57.42%), Query Frame = 0
Query:  117 KVKIEKFDGSD-FGFWKMQIEDYLYQKKLY--LPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSLMESSRSNSGSALSVENRGRNSQKGCNQ-GR--GRSKSRRRSQTKVRNDITCWNCQKNGHFKNQCRASRK 366
            K ++ KF+G + F  W+ ++ D L Q+ L+  L +  +KP+ M+  DW  LD +A   IRL L+ +V  NI+++ T   +   L ++Y   +L NK+YL ++L  L M EG +   H++ FN +I QLA++ +  ++E KA+LLL+SLP S+    T   +  +  +LK D    L+L+E + ++        N G AL  E RGR+ Q+  N  GR   R KS+ RS+++VRN   C+NC + GHFK  C   RK
Sbjct:    5 KYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELK-DVTSALLLNEKMRKKP------ENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRN---CYNCNQPGHFKRDCPNPRK 250          
BLAST of Va07G066340.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:11612357-11612686 REVERSE LENGTH=109)

HSP 1 Score: 93.9745 bits (232), Expect = 2.371e-23
Identity = 46/90 (51.11%), Postives = 64/90 (71.11%), Query Frame = 0
Query:  121 EKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKV 210
            +K DG+ + F +M+IEDYLY KKL+ PL G+K   M Q DW +L RQ L VIRLT++KN+A N+  +K+   LM+ LS++Y+KPS  N V
Sbjct:    7 DKVDGTSYSFCRMKIEDYLYGKKLHQPL-GKKVETMSQDDWNILYRQVLDVIRLTISKNIAHNVAKEKSPDGLMKVLSDIYKKPSTNNTV 95          
BLAST of Va07G066340.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:422732-424580 REVERSE LENGTH=488)

HSP 1 Score: 52.373 bits (124), Expect = 3.611e-7
Identity = 59/277 (21.30%), Postives = 99/277 (35.74%), Query Frame = 0
Query:  118 VKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPN-----DMEQSDWELLDRQALGVIRLTLAKNVALNIMNK-------------KTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSED---------VHRRSLMESSRSNSGSALSVENRGRNSQKGCNQGRGRSKSRRRSQTKVRNDITCWNCQKNGHFKNQCRASRKN 367
            +KI +FDG  + +W  Q+E +L Q KL   L    P+       E +  E+    A G   L        ++MN              K   +L   L  +Y+     +K   +R+ +  +M E   +   +  FN I   + S  +  D+      ++S  P SW    T          L    +++ + +E+         V  R    SS+     +L   +RG  S             R+  +   R  I C NC + GH    C  S+ +
Sbjct:  193 IKISRFDGKSYLYWASQMELFLKQLKLTYVLSEPCPSIGSSQGPETNPREITRADATGKKWLRDDYLCYTHLMNSLSDHLYRRYSQKFKHAKELWDELKWVYQCDESKSKRSQVRKYIEFRMVEERPILEQVQVFNKIADSIVSAGMFLDEAFHVSTIISKFPPSWRGFCT---RLMEEEYLPVWMLMERVKAEEELLRNGAKGVTYRPATGSSQMERTPSLGTTHRGSQSV---------GWKRKEPERDERVIIVCDNCGRKGHLAKHCWGSKSD 457          
The following BLAST results are available for this feature:
BLAST of Va07G066340.1 vs. UniProtKB/TrEMBL
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A0S3RPR0|A0A0S3RPR0_PHAAN0.000e+0100.00CCHC-type domain-containing protein OS=Vigna angul... [more]
tr|A0A8T0K2B7|A0A8T0K2B7_PHAAN0.000e+0100.00CCHC-type domain-containing protein OS=Phaseolus a... [more]
tr|A0A151RTE7|A0A151RTE7_CAJCA2.579e-12171.04Retrovirus-related Pol polyprotein from transposon... [more]
tr|A0A151QVU7|A0A151QVU7_CAJCA1.885e-12071.04Retrovirus-related Pol polyprotein from transposon... [more]
tr|A0A4Y1RMK2|A0A4Y1RMK2_PRUDU2.993e-10258.43CCHC-type domain-containing protein OS=Prunus dulc... [more]
tr|A0A4Y1RCM7|A0A4Y1RCM7_PRUDU6.408e-10258.43CCHC-type domain-containing protein OS=Prunus dulc... [more]
tr|A0A4Y1R3K4|A0A4Y1R3K4_PRUDU5.822e-10158.43CCHC-type domain-containing protein OS=Prunus dulc... [more]
tr|A0A6A3CMG8|A0A6A3CMG8_HIBSY2.059e-10062.02CCHC-type domain-containing protein OS=Hibiscus sy... [more]
tr|A0A6A2WXJ4|A0A6A2WXJ4_HIBSY9.508e-10062.31F-box family protein OS=Hibiscus syriacus OX=10633... [more]
tr|A0A6A2ZX47|A0A6A2ZX47_HIBSY8.407e-9962.31RING-type E3 ubiquitin transferase OS=Hibiscus syr... [more]
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BLAST of Va07G066340.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
Retrovirus-related4.931e-3836.33Pol polyprotein from transposon TNT 1-94 OS=Nicoti... [more]
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BLAST of Va07G066340.1 vs. Araport11
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs arabidopsis Araport11)
Total hits: 2
Match NameE-valueIdentityDescription
|2.371e-2351.11Symbols: no symbol available | no full name availa... [more]
|3.611e-721.30Symbols: no symbol available | no full name availa... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna angularis cv. Jingnong6 genome v1.7.1
Date Performed: 2024-05-23
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 346..362
e-value: 0.85
score: 21.0
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 348..362
score: 9.092303
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 161..298
e-value: 2.4E-24
score: 97.1
NoneNo IPR availablePANTHERPTHR35317OS04G0629600 PROTEINcoord: 161..360
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 343..367

Sequences
The following sequences are available for this feature:

mRNA sequence

>Va07G066340.1_Jingnong6 ID=Va07G066340.1_Jingnong6; Name=Va07G066340.1; organism=Vigna angularis; type=mRNA; length=1110bp
ATGACCCGGGCCAGTATAGATTTGTTTTCTCAGAAAACCAAAGCAAAACG
ACGACGCTCTACCTGTGAGAGAGAGACACAGAAGGAAGCCCTTGCTCTAG
CCACCACTGTAAGGCGACGTCGTAGGGGTGTCTTGCCGCCGCGCCACCAT
CTTCTTCAAACTATAAACACTCACTTTCCCTTACTTGGAACCCTTAAATT
TGGAGACCTAAAACTTCTCATTTTTCAGCTTTGTCTGATCTTCCACATCA
TAAAAGGTTTGGTTTTCTTTTTTCTTGGGAATCTTGGTTTAGAGAAGTTG
TGGGAGTTTTCTTCAAAAGTAGCGGGAGCAATGGCATTGGAAGAAGGTAA
GGTGAAGATTGAGAAATTTGATGGGAGTGACTTTGGGTTTTGGAAGATGC
AGATAGAAGACTACCTTTATCAGAAGAAGTTGTATCTACCCTTAAGAGGA
GAGAAGCCAAATGACATGGAACAGTCAGATTGGGAGTTATTAGATCGGCA
GGCCCTTGGTGTGATTCGGCTGACATTAGCCAAGAATGTTGCGTTAAACA
TCATGAACAAGAAAACAACTGCAGATTTGATGCAAGCGTTATCAAATATG
TATGAGAAGCCCTCTCTAGCCAATAAAGTGTATTTGATTCGCAGACTTGT
CAACCTTAAAATGGATGAAGGTAACTCTGTTACTCATCATATTAGTAAAT
TTAATACAATTATTGCACAGTTGGCATCAATGCAAATAACTTTTGATGAT
GAAATAAAAGCATTACTTTTATTATCGTCTCTTCCGGAAAGTTGGGGTGC
TACTGTTACTATAGGTAGTAATTTTGCAAGCAATAGCAAGTTGAAGTTTG
ATAACATCCTTGACTTGATCTTAAGCGAAGATGTTCACAGGAGAAGTTTA
ATGGAATCTTCCCGTTCTAATTCTGGTTCAGCATTGAGTGTTGAGAATAG
AGGAAGAAATAGCCAGAAAGGTTGTAATCAAGGCCGAGGCAGATCAAAGT
CTAGAAGGAGATCACAAACAAAAGTACGAAATGATATCACCTGTTGGAAT
TGTCAGAAAAATGGTCACTTTAAAAATCAATGTCGTGCTTCAAGGAAGAA
CAACAACTAA
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protein sequence of Va07G066340.1_Jingnong6

>Va07G066340.1_Jingnong6 ID=Va07G066340.1_Jingnong6; Name=Va07G066340.1_Jingnong6; organism=Vigna angularis; type=polypeptide; length=369bp
MTRASIDLFSQKTKAKRRRSTCERETQKEALALATTVRRRRRGVLPPRHH
LLQTINTHFPLLGTLKFGDLKLLIFQLCLIFHIIKGLVFFFLGNLGLEKL
WEFSSKVAGAMALEEGKVKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRG
EKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNM
YEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDD
EIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSL
MESSRSNSGSALSVENRGRNSQKGCNQGRGRSKSRRRSQTKVRNDITCWN
CQKNGHFKNQCRASRKNNN
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mRNA from alignment at Chr7:39183833..39187072-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Va07G066340.1_Jingnong6 ID=Va07G066340.1_Jingnong6; Name=Va07G066340.1; organism=Vigna angularis; type=mRNA; length=3240bp; location=Sequence derived from: Chr7:39183833..39187072- (Vigna angularis
GAAAATTTGAAATGCAAAACGTAGTGAAACTTGCAGTGATGAAAATGGGC TGGGAAATGTTTGCAACCTTATGACCCGAACCGGTCAGACTTGACCCGGC GAGTTTCAATGACCCGGGCCAGTATAGATTTGTTTTCTCAGAAAACCAAA GCAAAACGACGACGCTCTACCTGTGAGAGAGAGACACAGAAGGAAGCCCT TGCTCTAGCCACCACTGTAAGGCGACGTCGTAGGGGTGTCTTGCCGCCGC GCCACCATCTTCTTCAAACTATAAACACTCACTTTCCCTTACTTGGAACC CTTAAATTTGGAGACCTAAAACTTCTCATTTTTCAGGTAAGGTAAGCCCT CCGTTGCTTTTTCATATTCTGCATACCTCATTCTTGTCATATTTTAGATT TCACGAGCAAACAAACAAACTATATCCCTGTTTAAGTGGCGATTAATGTT AATTCTCGTGTTTAAATTGAACAGTATGAATAAATTGTAATAATTTTTCG TTTTTTAATTCAAATTTTCAGTGTTTGCGATCACCAAAACCCCCCATGAG GATAGAAGTTTAGGAACGTAATAATTCCGTGCCGTTAAAGCAGAATTTAA GCAAATTTAAAAATAACAGAATCAGAATGACTTTTAAATTGGATCCAATA ACTGGAGATTTCTTTTAAGGGTACAAGCCAAGTTAAAACATGTAGTGTTG AAGGACAAACTTTCATATTTCAAAACGTATTATTTAAATGTATCCATAGA TATGTTGTGTATGCGTATTATGAAGGTATATAACTGAAAACTAAAGTTTT ATTTTGAAATTTTGTGATATAATTTCCTTGGATAGGGAAATATTTGAGAC ATCTCTTATGGTTTAGTTAGAAATTTAGATTTCAGGTTAGCAGAAGTGAG ATAATTTCTCTCTTTGATTTGTGTGGTGTTATATTTTTAGCTAACATCTT GTGCAAAGCTTATATTATTAGTATTGTAGAGCTTAATTTAGTCTCACATT GCTCAATAATGATAGATAGTGTTCTCTATATAAGCAATTTTCTATAAAGC TTGAAAGATAGACCAAAAATATAAATATACTTATTAGTGTAATCATGAAC GTAGGTATTTGTATGTTGAACCATGTTAAATTCTTGTGTCATTTATTTCT CTCTTTCCTTTTTTTTGTCTTCATATGTATCAGGAGTCAGTTTCTTAGTA TGCTCTGTGTTTGCAGCTTTGTCTGATCTTCCACATCATAAAAGGTTTGG TTTTCTTTTTTCTTGGGAATCTTGGTTTAGAGAAGTTGTGGGAGTTTTCT TCAAAAGTAGCGGGAGCAATGGCATTGGAAGAAGGTAAGGTGAAGATTGA GAAATTTGATGGGAGTGACTTTGGGTTTTGGAAGATGCAGATAGAAGACT ACCTTTATCAGAAGAAGTTGTATCTACCCTTAAGAGGAGAGAAGCCAAAT GACATGGAACAGTCAGATTGGGAGTTATTAGATCGGCAGGCCCTTGGTGT GATTCGGCTGACATTAGCCAAGAATGTTGCGTTAAACATCATGAACAAGA AAACAACTGCAGATTTGATGCAAGCGTTATCAAATATGTATGAGAAGCCC TCTCTAGCCAATAAAGTGTATTTGATTCGCAGACTTGTCAACCTTAAAAT GGATGAAGGTAACTCTGTTACTCATCATATTAGTAAATTTAATACAATTA TTGCACAGTTGGCATCAATGCAAATAACTTTTGATGATGAAATAAAAGCA TTACTTTTATTATCGTCTCTTCCGGAAAGTTGGGGTGCTACTGTTACTAT AGGTAGTAATTTTGCAAGCAATAGCAAGTTGAAGTTTGATAACATCCTTG ACTTGATCTTAAGCGAAGATGTTCACAGGAGAAGTTTAATGGAATCTTCC CGTTCTAATTCTGGTTCAGCATTGAGTGTTGAGAATAGAGGAAGAAATAG CCAGAAAGGTTGTAATCAAGGCCGAGGCAGATCAAAGTCTAGAAGGAGAT CACAAACAAAAGTACGAAATGATATCACCTGTTGGAATTGTCAGAAAAAT GGTCACTTTAAAAATCAATGTCGTGCTTCAAGGAAGAACAACAACTAAAA GAAGCAAAATGATAATCAATCAGCAAATGCAGCAACAACAACAGATGAAA ATTGCAAATGCATTATTATGTAATTTAGATAGTTCCATTGACTCATGGAT TATGGACTCAGATAAGTCATTTCATACTACACCTTTCTTAGAACTATTAT CTAACTAGTTTCTAGAAAGTTTGGAAAGGTTTATCTTGAAGATGAAAATC TCTTGATATTGTGGGAAGAGGTAATATTAACATGAGGTTATGTGTTTTGT CTTTTCCTTAGCTTTACTAATCTTCTTTCCTTGAATTGCTTTTTGTATTT TAACTTTTATTTCTTTTTGTGGCTGTTGTTCTACATGATGGACAGGTTTA CTTTTGAATCTTGATGCTCACCTTCTTCAAGTCAAGTATTGCAAACAGTA ACAAATAATAAAGCTGGGAGAGATTTATTAAGTTTAGGAAGAAAATAATA CACATTATTTCTGAATGCTTTCTACTCCAAGAAACCAACTATTATGTTTT TTTACTGTTCTCATCTAATCCTTTTCTGTTCAATTATGTTTCTTAAAATT ATCTAATCCCACTAAATTCTAAGAACATTGGGGTTGGCTTTTCTGCACAT TTTGCGCTGTATATTATATGGTTAATTTAATAGGACTATGGTAAATAGAA GCATGAAGAGACTATTTATATAGCTAAATTTTTTGAAAGAGCTGAACAGG TTTAGTGAATTCAAGAATTAAGTATTTTTGTTCGTTACATAAATATTGGC CTTATTACATCATACAGGAGTTGAAACTTCAGACACAAGCTCAAAATACA CTGCCAAATGGAGAAGTGAGGGTTAAATCAGAGCATTGAGTGATATGTTT CTTGTGCTTTTGCTTGTCTATACATGGAATTCAATATTTCTGTTTCTTTT CCTATGTTATACGTATGCATTGTATAGTGAAGTTCATCTCTGCCTCTTTT TGTCTGCATCTTGGTTAAATGTTGTAAATTTGATGACTCATTTTTGCTTA CTATTAGTTAATTGAATATTATTGTCGTCTTTTGAGTTTGTGTACAAGTG CTTTAGCTCAATTTTCCATCAAGAAATTAATTAAAGTTGTTTTTATGTGT TCATTAAAATACTTAGTAATATATGTAATACTACTTTTTT
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Coding sequence (CDS) from alignment at Chr7:39183833..39187072-

>Va07G066340.1_Jingnong6 ID=Va07G066340.1_Jingnong6; Name=Va07G066340.1; organism=Vigna angularis; type=CDS; length=1110bp; location=Sequence derived from: Chr7:39183833..39187072- (Vigna angularis
ATGACCCGGGCCAGTATAGATTTGTTTTCTCAGAAAACCAAAGCAAAACG
ACGACGCTCTACCTGTGAGAGAGAGACACAGAAGGAAGCCCTTGCTCTAG
CCACCACTGTAAGGCGACGTCGTAGGGGTGTCTTGCCGCCGCGCCACCAT
CTTCTTCAAACTATAAACACTCACTTTCCCTTACTTGGAACCCTTAAATT
TGGAGACCTAAAACTTCTCATTTTTCAGCTTTGTCTGATCTTCCACATCA
TAAAAGGTTTGGTTTTCTTTTTTCTTGGGAATCTTGGTTTAGAGAAGTTG
TGGGAGTTTTCTTCAAAAGTAGCGGGAGCAATGGCATTGGAAGAAGGTAA
GGTGAAGATTGAGAAATTTGATGGGAGTGACTTTGGGTTTTGGAAGATGC
AGATAGAAGACTACCTTTATCAGAAGAAGTTGTATCTACCCTTAAGAGGA
GAGAAGCCAAATGACATGGAACAGTCAGATTGGGAGTTATTAGATCGGCA
GGCCCTTGGTGTGATTCGGCTGACATTAGCCAAGAATGTTGCGTTAAACA
TCATGAACAAGAAAACAACTGCAGATTTGATGCAAGCGTTATCAAATATG
TATGAGAAGCCCTCTCTAGCCAATAAAGTGTATTTGATTCGCAGACTTGT
CAACCTTAAAATGGATGAAGGTAACTCTGTTACTCATCATATTAGTAAAT
TTAATACAATTATTGCACAGTTGGCATCAATGCAAATAACTTTTGATGAT
GAAATAAAAGCATTACTTTTATTATCGTCTCTTCCGGAAAGTTGGGGTGC
TACTGTTACTATAGGTAGTAATTTTGCAAGCAATAGCAAGTTGAAGTTTG
ATAACATCCTTGACTTGATCTTAAGCGAAGATGTTCACAGGAGAAGTTTA
ATGGAATCTTCCCGTTCTAATTCTGGTTCAGCATTGAGTGTTGAGAATAG
AGGAAGAAATAGCCAGAAAGGTTGTAATCAAGGCCGAGGCAGATCAAAGT
CTAGAAGGAGATCACAAACAAAAGTACGAAATGATATCACCTGTTGGAAT
TGTCAGAAAAATGGTCACTTTAAAAATCAATGTCGTGCTTCAAGGAAGAA
CAACAACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding