evm.Ca_v2.0_06112

Transcript Overview
Nameevm.Ca_v2.0_06112
Unique NamedrCicArie.Frontier.2.0.Ca_v2.0_06112.1
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length393
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca3_v2.0chromosomeCa3_v2.0:48450348..48451443 -Cicer arietinum cv. CDC Frontier genome v2.0n/a
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
evm.Ca_v2.0_06112drCicArie.Frontier.2.0.Ca_v2.0_06112Cicer arietinumgene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.cds.Ca_v2.0_06112.1drCicArie.Frontier.2.0.cds.Ca_v2.0_06112.1Cicer arietinumCDS
drCicArie.Frontier.2.0.cds.Ca_v2.0_06112.1drCicArie.Frontier.2.0.cds.Ca_v2.0_06112.1_2Cicer arietinumCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.Ca_v2.0_06112.1.exon2drCicArie.Frontier.2.0.Ca_v2.0_06112.1.exon2Cicer arietinumexon
drCicArie.Frontier.2.0.Ca_v2.0_06112.1.exon1drCicArie.Frontier.2.0.Ca_v2.0_06112.1.exon1Cicer arietinumexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.Ca_v2.0_06112.1drCicArie.Frontier.2.0.Ca_v2.0_06112.1Cicer arietinumpolypeptide
drCicArie.Frontier.2.0.Ca_v2.0_06112.1drCicArie.Frontier.2.0.Ca_v2.0_06112.1-proteinCicer arietinumpolypeptide


Homology
BLAST of evm.Ca_v2.0_06112 vs. Araport11
Match: | (Symbols: REM39, VRN1 | REPRODUCTIVE MERISTEM 39, REDUCED VERNALIZATION RESPONSE 1 | chr3:6549077-6551568 REVERSE LENGTH=341)

HSP 1 Score: 97.8265 bits (242), Expect = 3.680e-25
Identity = 45/103 (43.69%), Postives = 70/103 (67.96%), Query Frame = 0
Query:    9 KPFHFFKIILNQSLREGKLMIPRKFVEKYGEGLPKTISLKPPNGKEWKLDLIKSDGKIWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSGLEINY 111
            +PF F K+I + +++E +L +P KFV K+ + L   ++L  P+G  W++ L K+D KIWF  GW+EF D +S+  G+LL+FRYE    F ++IF++S  EINY
Sbjct:    3 RPF-FHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNKIWFQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINY 104          
BLAST of evm.Ca_v2.0_06112 vs. Araport11
Match: | (Symbols: REM39, VRN1 | REPRODUCTIVE MERISTEM 39, REDUCED VERNALIZATION RESPONSE 1 | chr3:6548552-6551568 REVERSE LENGTH=372)

HSP 1 Score: 97.8265 bits (242), Expect = 5.398e-25
Identity = 46/108 (42.59%), Postives = 72/108 (66.67%), Query Frame = 0
Query:    9 KPFHFFKIILNQSLREGKLMIPRKFVEKYGEGLPKTISLKPPNGKEWKLDLIKSDGKIWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSGLEINYPFRGV 116
            +PF F K+I + +++E +L +P KFV K+ + L   ++L  P+G  W++ L K+D KIWF  GW+EF D +S+  G+LL+FRYE    F ++IF++S  EINY   G+
Sbjct:    3 RPF-FHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNKIWFQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTGL 109          
BLAST of evm.Ca_v2.0_06112 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:685791-686668 FORWARD LENGTH=190)

HSP 1 Score: 87.0409 bits (214), Expect = 3.476e-22
Identity = 40/116 (34.48%), Postives = 69/116 (59.48%), Query Frame = 0
Query:   13 FFKIILNQSLREGKLMIPRKFVEKYGEGLPKTISLKPPNGKEWKLDLIKSDGKIWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSGLEINYPFRGVEAKRVYNSNGNI 128
            FFK++L  ++++  + IP +FV+  G  L + ++L  P G +  + L +   +IWF +GW EFA+ HS+  GH L+F Y+K   F++ IF+ S  E NYP   V    + +S+ ++
Sbjct:   30 FFKLVLPSTMKDKMMRIPPRFVKLQGSKLSEVVTLVTPAGYKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYPLDAV---HIIDSDDDV 142          
BLAST of evm.Ca_v2.0_06112 vs. Araport11
Match: | (Symbols: REM7 | REPRODUCTIVE MERISTEM 7 | chr3:6542618-6543455 FORWARD LENGTH=194)

HSP 1 Score: 83.9593 bits (206), Expect = 5.805e-21
Identity = 37/104 (35.58%), Postives = 64/104 (61.54%), Query Frame = 0
Query:   13 FFKIILNQSLREGKLMIPRKFVEKYGEGLPKTISLKPPNGKEWKLDLIKSDGKIWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSGLEINYPFRGV 116
            FFK++L  ++++  + IP +FV+  G  L + ++L+ P G +  + L +   +IWF +GW EFA+ HS+  GH L+F Y++   F++ IF++S  E  YP   V
Sbjct:   30 FFKLVLPSTMKDKMMKIPPRFVKLQGSKLSEVVTLETPAGFKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYPLDAV 133          
BLAST of evm.Ca_v2.0_06112 vs. Araport11
Match: | (Symbols: REM7 | REPRODUCTIVE MERISTEM 7 | chr3:6542618-6543568 FORWARD LENGTH=209)

HSP 1 Score: 83.9593 bits (206), Expect = 8.780e-21
Identity = 37/104 (35.58%), Postives = 64/104 (61.54%), Query Frame = 0
Query:   13 FFKIILNQSLREGKLMIPRKFVEKYGEGLPKTISLKPPNGKEWKLDLIKSDGKIWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSGLEINYPFRGV 116
            FFK++L  ++++  + IP +FV+  G  L + ++L+ P G +  + L +   +IWF +GW EFA+ HS+  GH L+F Y++   F++ IF++S  E  YP   V
Sbjct:   30 FFKLVLPSTMKDKMMKIPPRFVKLQGSKLSEVVTLETPAGFKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYPLDAV 133          
BLAST of evm.Ca_v2.0_06112 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:18312983-18313748 FORWARD LENGTH=190)

HSP 1 Score: 82.8037 bits (203), Expect = 1.692e-20
Identity = 41/108 (37.96%), Postives = 62/108 (57.41%), Query Frame = 0
Query:   13 FFKIILNQSLREGKLMIPRKFVEKYGEGLPKTISLKPPNGKEWKLDLIKSDGKIWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSGLEINYPFRGVEAKR 120
            F KIIL   + E  + +P +FV ++G  L   ++L+ P G +  + + +   ++WF KGW EFA+ HSL+ GH L F YE    F++ IFD+S  EI YP    +  R
Sbjct:   34 FIKIILLSRIIEKMMKVPARFV-RFGPKLTDNVTLQTPVGFKRSIRIKRIGDEVWFEKGWSEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEYPLDDTDDNR 140          
BLAST of evm.Ca_v2.0_06112 vs. Araport11
Match: | (Symbols: REM7 | REPRODUCTIVE MERISTEM 7 | chr3:6542982-6543568 FORWARD LENGTH=172)

HSP 1 Score: 72.7886 bits (177), Expect = 7.040e-17
Identity = 33/88 (37.50%), Postives = 53/88 (60.23%), Query Frame = 0
Query:   29 IPRKFVEKYGEGLPKTISLKPPNGKEWKLDLIKSDGKIWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSGLEINYPFRGV 116
            IP +FV+  G  L + ++L+ P G +  + L +   +IWF +GW EFA+ HS+  GH L+F Y++   F++ IF++S  E  YP   V
Sbjct:    9 IPPRFVKLQGSKLSEVVTLETPAGFKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYPLDAV 96          
BLAST of evm.Ca_v2.0_06112 vs. Araport11
Match: | (Symbols: REM16 | | chr3:19766927-19768368 REVERSE LENGTH=286)

HSP 1 Score: 67.3958 bits (163), Expect = 3.792e-14
Identity = 39/106 (36.79%), Postives = 60/106 (56.60%), Query Frame = 0
Query:    1 MANEISQVKPFHFFKIILNQSLREGKLMIPRKFVEKYGEGLPKTISLKPPNGKEWKLDLIKSDGKIWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSG 106
            MA++ S++ P  FFK+ L +S  E  LMIP  F+    + LPKT+ L+   GK W + L K  G  +  +GW +FA+ H L +G  + F Y+    F++ +FD  G
Sbjct:    1 MADD-SELYP-RFFKVFLVESASES-LMIPLPFMAFLADPLPKTVKLQGLGGKLWTVSLKKISGAAYLTRGWPKFAEEHELKNGEFMTFVYDGHRTFEVSVFDRWG 103          
BLAST of evm.Ca_v2.0_06112 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:16048193-16049310 REVERSE LENGTH=285)

HSP 1 Score: 56.9954 bits (136), Expect = 1.967e-10
Identity = 34/100 (34.00%), Postives = 52/100 (52.00%), Query Frame = 0
Query:   12 HFFKIILNQSLREG---KLMIPRKFVEKYGEGLPKTISLKPPNGKEWKLDLIKSDGK-IWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSGL 107
            HF  +   Q L  G   +L+IPRKF       LP+ ++LK P+G  + + + + D K + F  GW +F   HSL    LLVF++     F++ +FD   L
Sbjct:   19 HFQTLHFTQLLLPGFHNRLVIPRKFSTHCKRKLPQIVTLKSPSGVTYNVGVEEDDEKTMAFRFGWDKFVKDHSLEENDLLVFKFHGVSEFEVLVFDGQTL 118          
BLAST of evm.Ca_v2.0_06112 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:16047357-16049310 REVERSE LENGTH=337)

HSP 1 Score: 56.9954 bits (136), Expect = 2.286e-10
Identity = 34/100 (34.00%), Postives = 52/100 (52.00%), Query Frame = 0
Query:   12 HFFKIILNQSLREG---KLMIPRKFVEKYGEGLPKTISLKPPNGKEWKLDLIKSDGK-IWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSGL 107
            HF  +   Q L  G   +L+IPRKF       LP+ ++LK P+G  + + + + D K + F  GW +F   HSL    LLVF++     F++ +FD   L
Sbjct:   19 HFQTLHFTQLLLPGFHNRLVIPRKFSTHCKRKLPQIVTLKSPSGVTYNVGVEEDDEKTMAFRFGWDKFVKDHSLEENDLLVFKFHGVSEFEVLVFDGQTL 118          
BLAST of evm.Ca_v2.0_06112 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8L3W1|VRN1_ARATH (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 GN=VRN1 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.595e-24
Identity = 45/103 (43.69%), Postives = 70/103 (67.96%), Query Frame = 0
Query:    9 KPFHFFKIILNQSLREGKLMIPRKFVEKYGEGLPKTISLKPPNGKEWKLDLIKSDGKIWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSGLEINY 111
            +PF F K+I + +++E +L +P KFV K+ + L   ++L  P+G  W++ L K+D KIWF  GW+EF D +S+  G+LL+FRYE    F ++IF++S  EINY
Sbjct:    3 RPF-FHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNKIWFQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINY 104          
BLAST of evm.Ca_v2.0_06112 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9ZSH7|Y4158_ARATH (B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana OX=3702 GN=At4g01580 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.363e-21
Identity = 40/116 (34.48%), Postives = 69/116 (59.48%), Query Frame = 0
Query:   13 FFKIILNQSLREGKLMIPRKFVEKYGEGLPKTISLKPPNGKEWKLDLIKSDGKIWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSGLEINYPFRGVEAKRVYNSNGNI 128
            FFK++L  ++++  + IP +FV+  G  L + ++L  P G +  + L +   +IWF +GW EFA+ HS+  GH L+F Y+K   F++ IF+ S  E NYP   V    + +S+ ++
Sbjct:   30 FFKLVLPSTMKDKMMRIPPRFVKLQGSKLSEVVTLVTPAGYKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYPLDAV---HIIDSDDDV 142          
BLAST of evm.Ca_v2.0_06112 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q84R27|Y3896_ARATH (B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana OX=3702 GN=At3g18960 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.516e-20
Identity = 37/104 (35.58%), Postives = 64/104 (61.54%), Query Frame = 0
Query:   13 FFKIILNQSLREGKLMIPRKFVEKYGEGLPKTISLKPPNGKEWKLDLIKSDGKIWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSGLEINYPFRGV 116
            FFK++L  ++++  + IP +FV+  G  L + ++L+ P G +  + L +   +IWF +GW EFA+ HS+  GH L+F Y++   F++ IF++S  E  YP   V
Sbjct:   30 FFKLVLPSTMKDKMMKIPPRFVKLQGSKLSEVVTLETPAGFKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYPLDAV 133          
BLAST of evm.Ca_v2.0_06112 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9XIB4|Y1475_ARATH (B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana OX=3702 GN=At1g49475 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.638e-19
Identity = 41/108 (37.96%), Postives = 62/108 (57.41%), Query Frame = 0
Query:   13 FFKIILNQSLREGKLMIPRKFVEKYGEGLPKTISLKPPNGKEWKLDLIKSDGKIWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSGLEINYPFRGVEAKR 120
            F KIIL   + E  + +P +FV ++G  L   ++L+ P G +  + + +   ++WF KGW EFA+ HSL+ GH L F YE    F++ IFD+S  EI YP    +  R
Sbjct:   34 FIKIILLSRIIEKMMKVPARFV-RFGPKLTDNVTLQTPVGFKRSIRIKRIGDEVWFEKGWSEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEYPLDDTDDNR 140          
BLAST of evm.Ca_v2.0_06112 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q7XS75|Y4469_ORYSJ (Putative B3 domain-containing protein Os04g0346900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0346900 PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 6.077e-14
Identity = 34/104 (32.69%), Postives = 58/104 (55.77%), Query Frame = 0
Query:   26 KLMIPRKFVEKY--GEGLPKTISL-KPPNGKEWKLDLIKSDGKIWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSGLEINYPFRGVEAKRVYNSNG 126
            K+ IP KFV  Y  GE L   +++   P GK W+++L K    ++ G GW +F  +H ++ G +++FRYE    FKI +F  +G + ++  +G+    +Y   G
Sbjct:  154 KMRIPDKFVRDYITGENLNSNMAIILSPLGKSWRVELDKDQSGVFLGGGWLQFLSFHGISRGDVVIFRYEGNLVFKISVFGPNGRQKDFKAKGIS---IYQGTG 254          
BLAST of evm.Ca_v2.0_06112 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q10Q26|Y3123_ORYSJ (B3 domain-containing protein Os03g0212300 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0212300 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.451e-13
Identity = 40/115 (34.78%), Postives = 61/115 (53.04%), Query Frame = 0
Query:    1 MANEISQVKPFHFFKIILNQSLREGKLMIPRKFVEKYGEGLPKTISLKPPN--GKEWKLDLIKSD--GKIWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSGLEINY 111
            MAN   ++  F FF+IIL  S +  KL +P KF  + G+   +   L+      + W + +   D  G ++ G+GW+EFA  H L  GH LVFRY+ A  F + +FD +    +Y
Sbjct:    5 MAN--LRLTDFEFFRIILPGSSKT-KLKLPYKFARELGDRELREARLRVAGEGRRPWDVKVFDDDVSGDVYLGRGWQEFARAHDLRDGHFLVFRYDGAAAFTVTVFDETMCRRDY 116          
BLAST of evm.Ca_v2.0_06112 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q851V5|Y3216_ORYSJ (Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0621600 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.139e-13
Identity = 36/96 (37.50%), Postives = 52/96 (54.17%), Query Frame = 0
Query:   12 HFFKIILNQSLREGKLMIPRKFVEKYGEGLPKTISLKPPNGKEWKLDLIKSDGKIWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSGL 107
            +FFK+++    R+  + IP KF E + + +  TI LK  NG    + + K   K+   KGW EFA+ H +  G  LVFRY     F++ IFD SG 
Sbjct:  149 YFFKVMIGGFRRQ--MTIPYKFAENFRDQIQGTIKLKARNGNTCSVLVDKCSNKLVLTKGWAEFANSHDIKMGDFLVFRYTGNSQFEVKIFDPSGC 242          

HSP 2 Score: 63.1586 bits (152), Expect = 2.475e-11
Identity = 34/97 (35.05%), Postives = 56/97 (57.73%), Query Frame = 0
Query:   12 HFFKIILNQSLREGKLMIPRKFVEKYGEGLPKTISLKPPNGKEWKLDLIKSDGKIWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSGLE 108
            +FFK+++ +  RE +++IP +F++ +   +P+TI L+  +G  + + + K+ GKI    GWK F   H L  G  LVF Y+     K+ IF  SG E
Sbjct:  733 NFFKVMIGR-FRE-RMIIPNEFLQYFRGKIPRTIKLQLRDGCTYDVQVTKNLGKISLQSGWKAFVTAHDLQMGDFLVFSYDGISKLKVLIFGPSGCE 827          

HSP 3 Score: 60.4622 bits (145), Expect = 1.871e-10
Identity = 32/97 (32.99%), Postives = 52/97 (53.61%), Query Frame = 0
Query:   12 HFFKIILNQSLREGKLMIPRKFVEKYGEGLPKTISLKPPNGKEWKLDLIKSDGKIWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSGLE 108
            +FFK+++    +  ++ IP KF   +   + KTI L+P +G  + + + K    +  G GW+ F + H L  G  LVF+Y   F  ++ IFD SG E
Sbjct:  452 YFFKVMIGDFHK--RMTIPDKFARHFKGVISKTIKLEPRSGYTFDVQVTKKLNILVLGSGWESFVNAHDLNMGDFLVFKYNGDFLLQVLIFDPSGCE 546          
BLAST of evm.Ca_v2.0_06112 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8LAV5|REM20_ARATH (B3 domain-containing protein REM20 OS=Arabidopsis thaliana OX=3702 GN=REM20 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.723e-13
Identity = 39/106 (36.79%), Postives = 60/106 (56.60%), Query Frame = 0
Query:    1 MANEISQVKPFHFFKIILNQSLREGKLMIPRKFVEKYGEGLPKTISLKPPNGKEWKLDLIKSDGKIWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSG 106
            MA++ S++ P  FFK+ L +S  E  LMIP  F+    + LPKT+ L+   GK W + L K  G  +  +GW +FA+ H L +G  + F Y+    F++ +FD  G
Sbjct:    1 MADD-SELYP-RFFKVFLVESASES-LMIPLPFMAFLADPLPKTVKLQGLGGKLWTVSLKKISGAAYLTRGWPKFAEEHELKNGEFMTFVYDGHRTFEVSVFDRWG 103          
BLAST of evm.Ca_v2.0_06112 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q10GM4|Y3221_ORYSJ (B3 domain-containing protein Os03g0622100 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0622100 PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.617e-11
Identity = 29/87 (33.33%), Postives = 47/87 (54.02%), Query Frame = 0
Query:   27 LMIPRKFVEKYGEGLPKTISLKPPNGKEWKLDLIKSD-GKIWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSGLEINYP 112
            +++P +F   +   + + ++LK P+GK W + +  SD G++    GWKEF D + +     L+FRY     F + IFD SG E   P
Sbjct:   44 MIVPSRFANNFNGHISEVVNLKSPSGKTWSIGVAYSDTGELVLRSGWKEFVDANGVQENDCLLFRYSGVSSFDVLIFDPSGCEKASP 130          
BLAST of evm.Ca_v2.0_06112 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q10GM3|Y3222_ORYSJ (B3 domain-containing protein Os03g0622200 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0622200 PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 3.072e-10
Identity = 31/103 (30.10%), Postives = 53/103 (51.46%), Query Frame = 0
Query:   12 HFFKIILNQSLREGKLMIPRKFVEKYGEGLPKTISLKPPNGKEWKLDLIKSD-GKIWFGKGWKEFADYHSLAHGHLLVFRYEK-AFHFKIHIFDMSGLEINYP 112
            HF K ++        + +P +F   +   + + ++L+ P+G+ W + +  SD G++    GWKEF D + +  G  L+FRY   +  F + IFD SG E   P
Sbjct:   31 HFLKHMVGDFTE--SMTVPARFANNFNGHISEEVNLRSPSGETWSIGVANSDAGELVLQPGWKEFVDGNGIEEGDCLLFRYSGVSSSFDVLIFDPSGCEKASP 131          
BLAST of evm.Ca_v2.0_06112 vs. ExPASy TrEMBL (2024)
Match: tr|G7J3B6|G7J3B6_MEDTR (Plant-specific B3-DNA-binding domain protein OS=Medicago truncatula OX=3880 GN=MTR_3g098790 PE=4 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 2.350e-58
Identity = 89/126 (70.63%), Postives = 102/126 (80.95%), Query Frame = 0
Query:    1 MANEISQVKPFHFFKIILNQSLREGKLMIPRKFVEKYGEGLPKTISLKPPNGKEWKLDLIKSDGKIWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSGLEINYPFRGVEAKRVYNSNG 126
            MAN+I + KP HFFKIIL Q+L  GKLM+PRKFVEKYGE LPKTI +K PNG  WKL+L+KSDGKIWF KGWKEFA+YHSLAHGHLL+F+YE+   F +HIFD S LEINYP   VE KRV+N  G
Sbjct:    1 MANKIPRAKPVHFFKIILTQNLHHGKLMMPRKFVEKYGECLPKTICVKTPNGVNWKLNLVKSDGKIWFQKGWKEFAEYHSLAHGHLLLFKYERTSLFHVHIFDKSALEINYPLTRVEDKRVFNCQG 126          
BLAST of evm.Ca_v2.0_06112 vs. ExPASy TrEMBL (2024)
Match: tr|A0A396J148|A0A396J148_MEDTR (Putative transcription factor B3-Domain family OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr3g0131891 PE=4 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 2.484e-58
Identity = 89/126 (70.63%), Postives = 102/126 (80.95%), Query Frame = 0
Query:    1 MANEISQVKPFHFFKIILNQSLREGKLMIPRKFVEKYGEGLPKTISLKPPNGKEWKLDLIKSDGKIWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSGLEINYPFRGVEAKRVYNSNG 126
            MAN+I + KP HFFKIIL Q+L  GKLM+PRKFVEKYGE LPKTI +K PNG  WKL+L+KSDGKIWF KGWKEFA+YHSLAHGHLL+F+YE+   F +HIFD S LEINYP   VE KRV+N  G
Sbjct:    7 MANKIPRAKPVHFFKIILTQNLHHGKLMMPRKFVEKYGECLPKTICVKTPNGVNWKLNLVKSDGKIWFQKGWKEFAEYHSLAHGHLLLFKYERTSLFHVHIFDKSALEINYPLTRVEDKRVFNCQG 132          
BLAST of evm.Ca_v2.0_06112 vs. ExPASy TrEMBL (2024)
Match: tr|G7KVV6|G7KVV6_MEDTR (Plant-specific B3-DNA-binding domain protein OS=Medicago truncatula OX=3880 GN=MTR_7g050580 PE=4 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 4.796e-57
Identity = 87/129 (67.44%), Postives = 106/129 (82.17%), Query Frame = 0
Query:    1 MANEISQVKPFHFFKIILNQSLREGKLMIPRKFVEKYGEGLPKTISLKPPNGKEWKLDLIKSDGKIWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSGLEINYPFRGVEAKRVYNSNGNIS 129
            MA+EI +V+P HFFKIIL Q+L EGKLM+PRKFVEKYG+ LPK   LK PNG +WKL+L+KSDGKIWF KGWK+FA++HSLAHGHLL+FRYEK  +F++HIF+ S LE NYP + VEAK + N  GN S
Sbjct:    1 MASEIPEVRPTHFFKIILAQNLHEGKLMMPRKFVEKYGKSLPKETCLKTPNGGKWKLNLVKSDGKIWFEKGWKQFAEHHSLAHGHLLLFRYEKTSNFEVHIFEKSALETNYPSKRVEAKTISNDQGNES 129          
BLAST of evm.Ca_v2.0_06112 vs. ExPASy TrEMBL (2024)
Match: tr|G7KVW6|G7KVW6_MEDTR (Plant-specific B3-DNA-binding domain protein OS=Medicago truncatula OX=3880 GN=MTR_7g050710 PE=4 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 7.447e-53
Identity = 80/127 (62.99%), Postives = 102/127 (80.31%), Query Frame = 0
Query:    1 MANEISQVKPFHFFKIILNQSLREGKLMIPRKFVEKYGEGLPKTISLKPPNGKEWKLDLIKSDGKIWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSGLEINYPFRGVEAKRVYNSNGN 127
            MA+EI++VKP  FFKIIL Q+L +G L +PRKFVEKYG+GLPK I LK PNG +W+L+L+KSDGKIWF KGWK+FA++HS+ HGHLL+FRYEK   F++ IF  S LEI+Y F+ VE+K+  N  GN
Sbjct:    1 MASEIAEVKPIQFFKIILAQNLLQGNLRMPRKFVEKYGKGLPKAICLKTPNGAKWRLNLVKSDGKIWFEKGWKQFAEHHSIGHGHLLLFRYEKTSKFEVQIFGKSALEIDYSFKRVESKKFSNGQGN 127          
BLAST of evm.Ca_v2.0_06112 vs. ExPASy TrEMBL (2024)
Match: tr|Q2HSK0|Q2HSK0_MEDTR (Putative transcription factor B3-Domain family OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC151521g52v2 PE=4 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 7.707e-53
Identity = 80/127 (62.99%), Postives = 102/127 (80.31%), Query Frame = 0
Query:    1 MANEISQVKPFHFFKIILNQSLREGKLMIPRKFVEKYGEGLPKTISLKPPNGKEWKLDLIKSDGKIWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSGLEINYPFRGVEAKRVYNSNGN 127
            MA+EI++VKP  FFKIIL Q+L +G L +PRKFVEKYG+GLPK I LK PNG +W+L+L+KSDGKIWF KGWK+FA++HS+ HGHLL+FRYEK   F++ IF  S LEI+Y F+ VE+K+  N  GN
Sbjct:    6 MASEIAEVKPIQFFKIILAQNLLQGNLRMPRKFVEKYGKGLPKAICLKTPNGAKWRLNLVKSDGKIWFEKGWKQFAEHHSIGHGHLLLFRYEKTSKFEVQIFGKSALEIDYSFKRVESKKFSNGQGN 132          
BLAST of evm.Ca_v2.0_06112 vs. ExPASy TrEMBL (2024)
Match: tr|I1ML85|I1ML85_SOYBN (TF-B3 domain-containing protein OS=Glycine max OX=3847 GN=100793469 PE=4 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 1.596e-52
Identity = 83/121 (68.60%), Postives = 94/121 (77.69%), Query Frame = 0
Query:    7 QVKPFHFFKIILNQSLREGKLMIPRKFVEKYGEGLPKTISLKPPNGKEWKLDLIKSDGKIWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSGLEINYPFRGVEAKRVYNSNGN 127
            QVKPFHFFKII  Q+L++GKLMIP KFVEKYGEGLP  + LK PNG EW  +L K DGKIWF KGWKEFA+YHSLAHGHLLVFR     HF++HIFD+S LEI+YP +G E K   N  GN
Sbjct:   11 QVKPFHFFKIITAQNLQDGKLMIPNKFVEKYGEGLPNALFLKTPNGTEWNFNLEKHDGKIWFQKGWKEFAEYHSLAHGHLLVFRRHGTSHFQVHIFDLSSLEIDYPSKGTEGKTSPNHEGN 131          
BLAST of evm.Ca_v2.0_06112 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445GEK6|A0A445GEK6_GLYSO (B3 domain-containing transcription factor VRN1 OS=Glycine soja OX=3848 GN=D0Y65_042709 PE=4 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.533e-52
Identity = 83/124 (66.94%), Postives = 96/124 (77.42%), Query Frame = 0
Query:    4 EISQVKPFHFFKIILNQSLREGKLMIPRKFVEKYGEGLPKTISLKPPNGKEWKLDLIKSDGKIWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSGLEINYPFRGVEAKRVYNSNGN 127
            ++ QVKPFHFFKII  Q+L++GKLMIP KFVEKYGEGLP  + LK PNG EW  +L K DGKIWF KGWKEFA+YHSLAHGHLLVFR     HF++HIFD+S LEI+YP +G E K   N  GN
Sbjct:   94 QLHQVKPFHFFKIITTQNLQDGKLMIPNKFVEKYGEGLPNALFLKTPNGTEWNFNLEKHDGKIWFQKGWKEFAEYHSLAHGHLLVFRRHGTSHFQVHIFDLSSLEIDYPSKGTEGKTSPNHEGN 217          
BLAST of evm.Ca_v2.0_06112 vs. ExPASy TrEMBL (2024)
Match: tr|A2Q2N6|A2Q2N6_MEDTR (Putative transcription factor B3-Domain family OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC151521g48v2 PE=4 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 3.319e-52
Identity = 84/127 (66.14%), Postives = 97/127 (76.38%), Query Frame = 0
Query:    1 MANEISQVKPFHFFKIILNQSLREGKLMIPRKFVEKYGEGLPKTISLKPPNGKEWKLDLIKSDGKIWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSGLEINYPFRGVEAKRVYNSNGN 127
            MANE     P HFFKII +QSL +GKL+IPRKFVEKYGEGL   I LK PNG +WKL+L+KSDGKIWF KGWKEF  YHSL+ GHLL+F+Y +  HF +HIFD S LEI YP + VE+KRV N  GN
Sbjct:    1 MANEFP---PTHFFKIICDQSLHQGKLIIPRKFVEKYGEGLSNAIYLKTPNGAKWKLNLVKSDGKIWFEKGWKEFVKYHSLSQGHLLLFKYGRTSHFHVHIFDKSALEIKYPSQRVESKRVSNDLGN 124          
BLAST of evm.Ca_v2.0_06112 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0R0FLL2|A0A0R0FLL2_SOYBN (TF-B3 domain-containing protein OS=Glycine max OX=3847 GN=100793469 PE=4 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.207e-52
Identity = 83/121 (68.60%), Postives = 94/121 (77.69%), Query Frame = 0
Query:    7 QVKPFHFFKIILNQSLREGKLMIPRKFVEKYGEGLPKTISLKPPNGKEWKLDLIKSDGKIWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSGLEINYPFRGVEAKRVYNSNGN 127
            QVKPFHFFKII  Q+L++GKLMIP KFVEKYGEGLP  + LK PNG EW  +L K DGKIWF KGWKEFA+YHSLAHGHLLVFR     HF++HIFD+S LEI+YP +G E K   N  GN
Sbjct:   11 QVKPFHFFKIITAQNLQDGKLMIPNKFVEKYGEGLPNALFLKTPNGTEWNFNLEKHDGKIWFQKGWKEFAEYHSLAHGHLLVFRRHGTSHFQVHIFDLSSLEIDYPSKGTEGKTSPNHEGN 131          
BLAST of evm.Ca_v2.0_06112 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D4Y4E2|A0A9D4Y4E2_PEA (TF-B3 domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_034808 PE=4 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.742e-51
Identity = 84/130 (64.62%), Postives = 103/130 (79.23%), Query Frame = 0
Query:    1 MANEISQVKPFHFFKIILNQSLREGKLMIPRKFVEKYGEGLPKTISLKPPNGKEWKLDLIKSDGKIWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSGLEINYPFRGVEAKRVYNSNGNISK 130
            MANEI+   PFHFFKII+++SL +GKLMIP KFV KYGEGLP  I L  PNG  WK++L+K+DGKIWF KGWKEF +Y+SL+HGHLLVF+YEK  HF++ IFD S LEINYP + VE ++V  SN + SK
Sbjct:    1 MANEIA---PFHFFKIIVSESLNQGKLMIPVKFVNKYGEGLPTAIYLNTPNGAVWKINLVKNDGKIWFEKGWKEFEEYYSLSHGHLLVFKYEKTCHFEVQIFDKSALEINYPSKSVETEKVL-SNEDDSK 126          
The following BLAST results are available for this feature:
BLAST of evm.Ca_v2.0_06112 vs. Araport11
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
|3.680e-2543.69Symbols: REM39, VRN1 | REPRODUCTIVE MERISTEM 39, R... [more]
|5.398e-2542.59Symbols: REM39, VRN1 | REPRODUCTIVE MERISTEM 39, R... [more]
|3.476e-2234.48Symbols: no symbol available | no full name availa... [more]
|5.805e-2135.58Symbols: REM7 | REPRODUCTIVE MERISTEM 7 | chr3:654... [more]
|8.780e-2135.58Symbols: REM7 | REPRODUCTIVE MERISTEM 7 | chr3:654... [more]
|1.692e-2037.96Symbols: no symbol available | no full name availa... [more]
|7.040e-1737.50Symbols: REM7 | REPRODUCTIVE MERISTEM 7 | chr3:654... [more]
|3.792e-1436.79Symbols: REM16 | | chr3:19766927-19768368 REVERSE... [more]
|1.967e-1034.00Symbols: no symbol available | no full name availa... [more]
|2.286e-1034.00Symbols: no symbol available | no full name availa... [more]
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BLAST of evm.Ca_v2.0_06112 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt Swissprot )
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q8L3W1|VRN1_ARATH3.595e-2443.69B3 domain-containing transcription factor VRN1 OS=... [more]
sp|Q9ZSH7|Y4158_ARATH3.363e-2134.48B3 domain-containing protein At4g01580 OS=Arabidop... [more]
sp|Q84R27|Y3896_ARATH8.516e-2035.58B3 domain-containing protein At3g18960 OS=Arabidop... [more]
sp|Q9XIB4|Y1475_ARATH1.638e-1937.96B3 domain-containing protein At1g49475 OS=Arabidop... [more]
sp|Q7XS75|Y4469_ORYSJ6.077e-1432.69Putative B3 domain-containing protein Os04g0346900... [more]
sp|Q10Q26|Y3123_ORYSJ1.451e-1334.78B3 domain-containing protein Os03g0212300 OS=Oryza... [more]
sp|Q851V5|Y3216_ORYSJ3.139e-1337.50Putative B3 domain-containing protein Os03g0621600... [more]
sp|Q8LAV5|REM20_ARATH3.723e-1336.79B3 domain-containing protein REM20 OS=Arabidopsis ... [more]
sp|Q10GM4|Y3221_ORYSJ1.617e-1133.33B3 domain-containing protein Os03g0622100 OS=Oryza... [more]
sp|Q10GM3|Y3222_ORYSJ3.072e-1030.10B3 domain-containing protein Os03g0622200 OS=Oryza... [more]
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BLAST of evm.Ca_v2.0_06112 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|G7J3B6|G7J3B6_MEDTR2.350e-5870.63Plant-specific B3-DNA-binding domain protein OS=Me... [more]
tr|A0A396J148|A0A396J148_MEDTR2.484e-5870.63Putative transcription factor B3-Domain family OS=... [more]
tr|G7KVV6|G7KVV6_MEDTR4.796e-5767.44Plant-specific B3-DNA-binding domain protein OS=Me... [more]
tr|G7KVW6|G7KVW6_MEDTR7.447e-5362.99Plant-specific B3-DNA-binding domain protein OS=Me... [more]
tr|Q2HSK0|Q2HSK0_MEDTR7.707e-5362.99Putative transcription factor B3-Domain family OS=... [more]
tr|I1ML85|I1ML85_SOYBN1.596e-5268.60TF-B3 domain-containing protein OS=Glycine max OX=... [more]
tr|A0A445GEK6|A0A445GEK6_GLYSO2.533e-5266.94B3 domain-containing transcription factor VRN1 OS=... [more]
tr|A2Q2N6|A2Q2N6_MEDTR3.319e-5266.14Putative transcription factor B3-Domain family OS=... [more]
tr|A0A0R0FLL2|A0A0R0FLL2_SOYBN4.207e-5268.60TF-B3 domain-containing protein OS=Glycine max OX=... [more]
tr|A0A9D4Y4E2|A0A9D4Y4E2_PEA1.742e-5164.62TF-B3 domain-containing protein OS=Pisum sativum O... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum cv. CDC Frontier genome v2.0
Date Performed: 2024-07-26
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003340B3 DNA binding domainPFAMPF02362B3coord: 13..103
e-value: 9.1E-17
score: 72.2
IPR003340B3 DNA binding domainPROSITEPS50863B3coord: 12..105
score: 14.747998
IPR003340B3 DNA binding domainCDDcd10017B3_DNAcoord: 11..103
e-value: 7.88356E-21
score: 78.9089
IPR015300DNA-binding pseudobarrel domain superfamilyGENE3D2.40.330.10coord: 4..106
e-value: 3.9E-29
score: 102.6
IPR015300DNA-binding pseudobarrel domain superfamilySUPERFAMILY101936DNA-binding pseudobarrel domaincoord: 7..105
IPR050655Plant B3 domain-containingPANTHERPTHR31920B3 DOMAIN-CONTAININGcoord: 7..110

Sequences
The following sequences are available for this feature:

mRNA sequence

>drCicArie.Frontier.2.0.Ca_v2.0_06112.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_06112.1; Name=evm.Ca_v2.0_06112; organism=Cicer arietinum; type=mRNA; length=393bp
ATGGCTAATGAAATTTCTCAAGTGAAACCATTCCACTTTTTCAAGATCAT
ACTTAATCAAAGCCTTCGTGAAGGAAAGCTTATGATTCCAAGAAAGTTTG
TGGAGAAATATGGAGAAGGTTTACCAAAAACAATATCTCTCAAGCCTCCA
AATGGTAAAGAGTGGAAATTAGATTTGATAAAAAGTGATGGTAAAATATG
GTTTGGAAAGGGTTGGAAAGAATTTGCAGACTATCATTCTCTGGCTCATG
GCCATCTTCTGGTTTTCAGATATGAAAAAGCTTTTCATTTTAAGATACAC
ATATTTGATATGAGTGGCTTAGAGATAAACTATCCTTTCAGAGGAGTAGA
AGCTAAAAGGGTCTACAATAGTAACGGAAATATCTCCAAATAA
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protein sequence of drCicArie.Frontier.2.0.Ca_v2.0_06112.1

>drCicArie.Frontier.2.0.Ca_v2.0_06112.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_06112.1; Name=drCicArie.Frontier.2.0.Ca_v2.0_06112.1; organism=Cicer arietinum; type=polypeptide; length=130bp
MANEISQVKPFHFFKIILNQSLREGKLMIPRKFVEKYGEGLPKTISLKPP
NGKEWKLDLIKSDGKIWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIH
IFDMSGLEINYPFRGVEAKRVYNSNGNISK
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mRNA from alignment at Ca3_v2.0:48450348..48451443-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>drCicArie.Frontier.2.0.Ca_v2.0_06112.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_06112.1; Name=evm.Ca_v2.0_06112; organism=Cicer arietinum; type=mRNA; length=1096bp; location=Sequence derived from: Ca3_v2.0:48450348..48451443- (Cicer arietinum
ATGGCTAATGAAATTTCTCAAGTGAAACCATTCCACTTTTTCAAGATCAT ACTTAATCAAAGCCTTCGTGAAGGAAAGCTTGTAAGCCTATACATTCTTC GTTGATATTCTAGTTTATTTATGATTCCGACTGTTTGTTTATTAGGTCAC AAGATTGGTTTTTCATAGTTTACATTACCTTCATGGTTAACATGACCATT TTCTCACAATTTCTTTCTTATTTTTTAAAACAGCAAGTAATTATAGTATA AATGTCATCTACCAGAGTTTATTACTCTAACTAGCTCTGTAATAATGGTT AAATTGCAGACCAATACATTATATAGAAAACATAATGCCTAAATAATTTA TATTACAAATAACTTTTTTTTTCTTAAGCTTTACTTATTAGGGGCTACAA CACTAAAATAATGTAGTATGAGAATCTTAGAGTTATATTTCAAACTCATG AGTTATATTTAGCCAGAAAAGCTAAATGTAAAACAGATTAGAGTTTCATT TAGCCGTATAAATCAGATTAGTGTTTTATTTAGCCGTATAAAACATATTA GAGTTTTATTTAGCAGTATAAAACAGATTAGATGTTGCTTAAAGTAATGT AACATAATATTTTTTATAGGCTAATTGTTAGTGGTTAATTTGTTAAGTAG CAGAGGTCGAGCGTTATACCTTATGCATATTATTCTTTTATATCCTAACT TATACCACTGTTCTAGTCCTTCGGGATAGCAAAATAGTTTTATGAGTTTA TCATTCATATTTATGTGGTTTAATTTATTGACAGATGATTCCAAGAAAGT TTGTGGAGAAATATGGAGAAGGTTTACCAAAAACAATATCTCTCAAGCCT CCAAATGGTAAAGAGTGGAAATTAGATTTGATAAAAAGTGATGGTAAAAT ATGGTTTGGAAAGGGTTGGAAAGAATTTGCAGACTATCATTCTCTGGCTC ATGGCCATCTTCTGGTTTTCAGATATGAAAAAGCTTTTCATTTTAAGATA CACATATTTGATATGAGTGGCTTAGAGATAAACTATCCTTTCAGAGGAGT AGAAGCTAAAAGGGTCTACAATAGTAACGGAAATATCTCCAAATAA
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Coding sequence (CDS) from alignment at Ca3_v2.0:48450348..48451443-

>drCicArie.Frontier.2.0.Ca_v2.0_06112.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_06112.1; Name=evm.Ca_v2.0_06112; organism=Cicer arietinum; type=CDS; length=393bp; location=Sequence derived from: Ca3_v2.0:48450348..48451443- (Cicer arietinum
ATGGCTAATGAAATTTCTCAAGTGAAACCATTCCACTTTTTCAAGATCAT
ACTTAATCAAAGCCTTCGTGAAGGAAAGCTTATGATTCCAAGAAAGTTTG
TGGAGAAATATGGAGAAGGTTTACCAAAAACAATATCTCTCAAGCCTCCA
AATGGTAAAGAGTGGAAATTAGATTTGATAAAAAGTGATGGTAAAATATG
GTTTGGAAAGGGTTGGAAAGAATTTGCAGACTATCATTCTCTGGCTCATG
GCCATCTTCTGGTTTTCAGATATGAAAAAGCTTTTCATTTTAAGATACAC
ATATTTGATATGAGTGGCTTAGAGATAAACTATCCTTTCAGAGGAGTAGA
AGCTAAAAGGGTCTACAATAGTAACGGAAATATCTCCAAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR003340B3_DNA-bd
IPR015300DNA-bd_pseudobarrel_sf
IPR050655Plant_B3_domain
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding