evm.Ca_v2.0_07802

Transcript Overview


Name	evm.Ca_v2.0_07802
Unique Name	drCicArie.Frontier.2.0.Ca_v2.0_07802.2
Type	mRNA
Organism	Cicer arietinum (chickpea)
Sequence length	540

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Ca3_v2.0	chromosome	Ca3_v2.0:71939327..71942519 +	Cicer arietinum cv. CDC Frontier genome v2.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum cv. CDC Frontier genome v2.0	2024-06-26
Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs arabidopsis Araport11	2024-07-26
InterProScan Analysis for Cicer arietinum cv. CDC Frontier genome v2.0	2024-07-26
Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt Swissprot	2024-07-26
Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt TrEMBL	2024-07-26

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
carccaR157	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
carccaR166	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
carccaR177	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
carccaR187	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
carvumR231	Vigna umbellata FF25 genome v1.0	Vigna umbellata
carvumR261	Vigna umbellata FF25 genome v1.0	Vigna umbellata
carvumR263	Vigna umbellata FF25 genome v1.0	Vigna umbellata
carvvaR147	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
carvvaR161	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
carvvaR197	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
carvasR203	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
carvstR214	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
carvasR234	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
carvasR237	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
carvstR243	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
carvstR246	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
carvunR144	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
carpvfR193	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
carvunR162	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
carvunR181	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
carpvfR221	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
evm.Ca_v2.0_07802	drCicArie.Frontier.2.0.Ca_v2.0_07802	Cicer arietinum	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
drCicArie.Frontier.2.0.Ca_v2.0_07802.2.exon1	drCicArie.Frontier.2.0.Ca_v2.0_07802.2.exon1	Cicer arietinum	exon
drCicArie.Frontier.2.0.Ca_v2.0_07802.2.exon2	drCicArie.Frontier.2.0.Ca_v2.0_07802.2.exon2	Cicer arietinum	exon
drCicArie.Frontier.2.0.Ca_v2.0_07802.2.exon3	drCicArie.Frontier.2.0.Ca_v2.0_07802.2.exon3	Cicer arietinum	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
drCicArie.Frontier.2.0.Ca_v2.0_07802.2.utr5p1	drCicArie.Frontier.2.0.Ca_v2.0_07802.2.utr5p1	Cicer arietinum	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
drCicArie.Frontier.2.0.cds.Ca_v2.0_07802.2	drCicArie.Frontier.2.0.cds.Ca_v2.0_07802.2	Cicer arietinum	CDS
drCicArie.Frontier.2.0.cds.Ca_v2.0_07802.2	drCicArie.Frontier.2.0.cds.Ca_v2.0_07802.2_2	Cicer arietinum	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
drCicArie.Frontier.2.0.Ca_v2.0_07802.2.utr3p1	drCicArie.Frontier.2.0.Ca_v2.0_07802.2.utr3p1	Cicer arietinum	three_prime_UTR
drCicArie.Frontier.2.0.Ca_v2.0_07802.2.utr3p2	drCicArie.Frontier.2.0.Ca_v2.0_07802.2.utr3p2	Cicer arietinum	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
drCicArie.Frontier.2.0.Ca_v2.0_07802.2	drCicArie.Frontier.2.0.Ca_v2.0_07802.2	Cicer arietinum	polypeptide
drCicArie.Frontier.2.0.Ca_v2.0_07802.2	drCicArie.Frontier.2.0.Ca_v2.0_07802.2-protein	Cicer arietinum	polypeptide

Homology

[Close]

BLAST of evm.Ca_v2.0_07802 vs. Araport11
Match: | (Symbols: BIC1 | Blue-light Inhibitor of Cryptochromes 1 | chr3:19546446-19546868 REVERSE LENGTH=140)

HSP 1 Score: 104.76 bits (260), Expect = 5.645e-29
Identity = 64/143 (44.76%), Postives = 86/143 (60.14%), Query Frame = 0

Query:   23 SHPLDSKNPHPSKDTNFEEKQEDPFLLRNQNHDVTQNQPVSKTILCNKETVASKDVEEKVLTTTSVNEVWEEESERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVEDGTRANAAALSIDN 165
            +HP+    P PS  T    KQ+ P L           Q  + ++  +K+ +A   +EEK   +   + V   ++ RERLK+HR E+AGRVWIPEIWGQEELLKDWIDCS FD  LVP+ I+ AR ALVE+  RA +A+  + N
Sbjct:   12 AHPIGPSQP-PSDQT----KQDPPSL----------PQEAASSVSADKKDLAL--LEEKPKQSQEEDRV---DTGRERLKKHRREIAGRVWIPEIWGQEELLKDWIDCSTFDTCLVPAGISSARTALVEEARRAASASGGLHN 134

[Close]

BLAST of evm.Ca_v2.0_07802 vs. Araport11
Match: | (Symbols: BIC2 | Blue-light Inhibitor of Cryptochromes 2 | chr3:16074228-16074578 REVERSE LENGTH=116)

HSP 1 Score: 72.0182 bits (175), Expect = 1.844e-16
Identity = 34/57 (59.65%), Postives = 41/57 (71.93%), Query Frame = 0

Query:   96 SERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVED 152
            S R+RLKRHR EVAG+V IP+ WG+E LL  W+D S FDA    S+I  ARAAL+ D
Sbjct:   39 SGRDRLKRHREEVAGKVPIPDSWGKEGLLMGWMDFSTFDAAFTSSQIVSARAALMAD 95

[Close]

BLAST of evm.Ca_v2.0_07802 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9LXJ1|BIC1_ARATH (Protein BIC1 OS=Arabidopsis thaliana OX=3702 GN=BIC1 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.432e-28
Identity = 64/143 (44.76%), Postives = 86/143 (60.14%), Query Frame = 0

Query:   23 SHPLDSKNPHPSKDTNFEEKQEDPFLLRNQNHDVTQNQPVSKTILCNKETVASKDVEEKVLTTTSVNEVWEEESERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVEDGTRANAAALSIDN 165
            +HP+    P PS  T    KQ+ P L           Q  + ++  +K+ +A   +EEK   +   + V   ++ RERLK+HR E+AGRVWIPEIWGQEELLKDWIDCS FD  LVP+ I+ AR ALVE+  RA +A+  + N
Sbjct:   12 AHPIGPSQP-PSDQT----KQDPPSL----------PQEAASSVSADKKDLAL--LEEKPKQSQEEDRV---DTGRERLKKHRREIAGRVWIPEIWGQEELLKDWIDCSTFDTCLVPAGISSARTALVEEARRAASASGGLHN 134

[Close]

BLAST of evm.Ca_v2.0_07802 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9M280|BIC2_ARATH (Protein BIC2 OS=Arabidopsis thaliana OX=3702 GN=BIC2 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.779e-15
Identity = 34/57 (59.65%), Postives = 41/57 (71.93%), Query Frame = 0

Query:   96 SERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVED 152
            S R+RLKRHR EVAG+V IP+ WG+E LL  W+D S FDA    S+I  ARAAL+ D
Sbjct:   39 SGRDRLKRHREEVAGKVPIPDSWGKEGLLMGWMDFSTFDAAFTSSQIVSARAALMAD 95

[Close]

BLAST of evm.Ca_v2.0_07802 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2XTB9|A0A1S2XTB9_CICAR (Protein BIC1-like OS=Cicer arietinum OX=3827 GN=LOC101508117 PE=4 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 1.756e-117
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0

Query:    1 MEKNNIFIMSHQSSIESDGMIPSHPLDSKNPHPSKDTNFEEKQEDPFLLRNQNHDVTQNQPVSKTILCNKETVASKDVEEKVLTTTSVNEVWEEESERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVEDGTRANAAALSIDN 165
            MEKNNIFIMSHQSSIESDGMIPSHPLDSKNPHPSKDTNFEEKQEDPFLLRNQNHDVTQNQPVSKTILCNKETVASKDVEEKVLTTTSVNEVWEEESERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVEDGTRANAAALSIDN
Sbjct:    1 MEKNNIFIMSHQSSIESDGMIPSHPLDSKNPHPSKDTNFEEKQEDPFLLRNQNHDVTQNQPVSKTILCNKETVASKDVEEKVLTTTSVNEVWEEESERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVEDGTRANAAALSIDN 165

[Close]

BLAST of evm.Ca_v2.0_07802 vs. ExPASy TrEMBL (2024)
Match: tr|A0A396H5Y6|A0A396H5Y6_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr7g0266241 PE=4 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.619e-76
Identity = 124/186 (66.67%), Postives = 137/186 (73.66%), Query Frame = 0

Query:    2 EKNNIFIMSHQSSIESDGMIPSHPLDSKNPHPSKDTNFEEKQEDPFLL---RNQNHDVTQNQPVS-KTILCNKETVA----------SKDVEEKVLTTTSVNEVWEEESERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVEDGTRANAAALSIDNSIYWAFTN 173
            E NN+FIMSHQSS+ESD  IPSHPLDSK PH SKD N E KQ+DP  L   + QNHD          ++LCNKE +A            DVE K LTT       EE+SERERLKRHRVEVAGRVWIPEIWGQE+LLKDWIDC+AFDAPLVPSKITMARAALVE+GT+ NAA LSI NSIYWAF+N
Sbjct:    3 ENNNLFIMSHQSSVESDDKIPSHPLDSKKPHSSKDVNLETKQDDPPFLNTQKVQNHDDKDKDATQYPSLLCNKEKMALLQELAPVSSMDDVEAKELTTMDEALDLEEDSERERLKRHRVEVAGRVWIPEIWGQEDLLKDWIDCTAFDAPLVPSKITMARAALVEEGTKTNAAPLSIHNSIYWAFSN 188

[Close]

BLAST of evm.Ca_v2.0_07802 vs. ExPASy TrEMBL (2024)
Match: tr|G7L635|G7L635_MEDTR (Plant/F3C22-140 protein, putative OS=Medicago truncatula OX=3880 GN=MTR_7g104540 PE=4 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.689e-72
Identity = 119/179 (66.48%), Postives = 131/179 (73.18%), Query Frame = 0

Query:    9 MSHQSSIESDGMIPSHPLDSKNPHPSKDTNFEEKQEDPFLL---RNQNHDVTQNQPVS-KTILCNKETVA----------SKDVEEKVLTTTSVNEVWEEESERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVEDGTRANAAALSIDNSIYWAFTN 173
            MSHQSS+ESD  IPSHPLDSK PH SKD N E KQ+DP  L   + QNHD          ++LCNKE +A            DVE K LTT       EE+SERERLKRHRVEVAGRVWIPEIWGQE+LLKDWIDC+AFDAPLVPSKITMARAALVE+GT+ NAA LSI NSIYWAF+N
Sbjct:    1 MSHQSSVESDDKIPSHPLDSKKPHSSKDVNLETKQDDPPFLNTQKVQNHDDKDKDATQYPSLLCNKEKMALLQELAPVSSMDDVEAKELTTMDEALDLEEDSERERLKRHRVEVAGRVWIPEIWGQEDLLKDWIDCTAFDAPLVPSKITMARAALVEEGTKTNAAPLSIHNSIYWAFSN 179

[Close]

BLAST of evm.Ca_v2.0_07802 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D4XQA5|A0A9D4XQA5_PEA (Protein BIC1 OS=Pisum sativum OX=3888 GN=KIW84_031334 PE=4 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 6.187e-68
Identity = 126/186 (67.74%), Postives = 136/186 (73.12%), Query Frame = 0

Query:    2 EKNNIFIMSHQSSIESDGMIPSHPLDSKNPHPSKDTNFEEKQEDPFLL---RNQNHDVTQNQPVSKTILCNKETVASK----DVEEKVLTTTSVNEVWEEESERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVEDGT-RANAAALSIDNSIYWAFTNDLPWIY 179
            E NN+FIMSH SS ESD  IPSHP        SKD NFE KQ+DPFLL   + QNHD         + LC KE +AS     DV+ K LTT    EV EE SERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDC+AFDAPL+PSKITMARAALV+ GT RANAA LSIDNS+Y AFTN L WIY
Sbjct:    3 ENNNLFIMSHHSSAESDDKIPSHP--------SKDANFERKQDDPFLLSTQKRQNHDDQDKDATQNSSLCKKEKMASVKDDVDVDAKELTTVDEEEV-EEVSERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCTAFDAPLIPSKITMARAALVQQGTARANAAPLSIDNSMYSAFTNGLHWIY 179

[Close]

BLAST of evm.Ca_v2.0_07802 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2K3KYE8|A0A2K3KYE8_TRIPR (Protein BIC1-like OS=Trifolium pratense OX=57577 GN=L195_g027187 PE=4 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.234e-63
Identity = 115/180 (63.89%), Postives = 131/180 (72.78%), Query Frame = 0

Query:    2 EKNNIFIMSHQSSIESDGMIPSHPLDSKNPHPSKD-TNFEEKQEDPFLL---RNQNHD------------VTQNQPVSKTILCNKETVASKDVEEKVLTTTSVNEVWEEESERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVEDGTRANAAALSIDN 165
            E NN+FIMSHQSS ESD  IPSHPLD K PH SKD  NFE++QE+PF L   ++QNHD             TQN     ++LCNKE +   D E K LT+       EE SERERLKRHRVEVAGRVWIPEIWGQE+LLK+WIDC+AFDAPLVPSKITMARAALV++GT+ NA  LSIDN
Sbjct:    3 ENNNLFIMSHQSSAESDDKIPSHPLDIKVPHSSKDHVNFEKEQENPFSLNTQKSQNHDEDDEDKDKDKDATTQN----PSLLCNKEKI---DDEAKELTSV------EEVSERERLKRHRVEVAGRVWIPEIWGQEDLLKNWIDCTAFDAPLVPSKITMARAALVQEGTKTNATPLSIDN 169

[Close]

BLAST of evm.Ca_v2.0_07802 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8L766|A0A8B8L766_ABRPR (Uncharacterized protein LOC113861742 OS=Abrus precatorius OX=3816 GN=LOC113861742 PE=4 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 3.128e-60
Identity = 108/170 (63.53%), Postives = 122/170 (71.76%), Query Frame = 0

Query:    9 MSHQSSIESDGMIPSHPLDSKNPHPSKDT-NFEEKQEDPFLLRNQNHD------VTQNQPVSKTILCNKETVASK------DVEEKVLTTTSVNEVWEEESERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVEDGTRANAAALSIDN 165
            M+HQS  ES   IPS PLD  +PHPSKD  N E++QE+   L  ++HD      VTQN   SKT+ CNKE VA K      DV EK    TSV E   E+S RERLKRHRVEVAGRVWIPEIWGQEELLKDWIDC+AFDAPLVPS ITMARAALVE+ +RANAA + I+N
Sbjct:    1 MAHQSPSESHHQIPSQPLDLNSPHPSKDNINMEQEQEEGPFLSTRSHDDDRDKDVTQNPSASKTLFCNKEKVALKEPSHAMDVAEK----TSVAEALGEDSGRERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCTAFDAPLVPSTITMARAALVEECSRANAAGVRIEN 166

[Close]

BLAST of evm.Ca_v2.0_07802 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D4XS11|A0A9D4XS11_PEA (Protein BIC1 OS=Pisum sativum OX=3888 GN=KIW84_031334 PE=4 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.934e-60
Identity = 119/186 (63.98%), Postives = 132/186 (70.97%), Query Frame = 0

Query:    2 EKNNIFIMSHQSSIESDGMIPSHPLDSKNPHPSKDTNFEEKQEDPFLL---RNQNHDVTQNQPVSKTILCNKETVASK----DVEEKVLTTTSVNEVWEEESERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVEDGT-RANAAALSIDNSIYWAFTNDLPWIY 179
            E NN+FIMSH SS ESD  IPSHP        SKD NFE KQ+DPFLL   + QNHD         + LC KE +AS     DV+ K LTT    EV EE SERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDC+AFDAPL+PSKITMARAALV+ GT RANAA LSIDN +  + +N+   IY
Sbjct:    3 ENNNLFIMSHHSSAESDDKIPSHP--------SKDANFERKQDDPFLLSTQKRQNHDDQDKDATQNSSLCKKEKMASVKDDVDVDAKELTTVDEEEV-EEVSERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCTAFDAPLIPSKITMARAALVQQGTARANAAPLSIDNRLV-SLSNNPSHIY 178

[Close]

BLAST of evm.Ca_v2.0_07802 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D4XQX9|A0A9D4XQX9_PEA (Protein BIC1 OS=Pisum sativum OX=3888 GN=KIW84_031334 PE=4 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.846e-59
Identity = 116/172 (67.44%), Postives = 125/172 (72.67%), Query Frame = 0

Query:    2 EKNNIFIMSHQSSIESDGMIPSHPLDSKNPHPSKDTNFEEKQEDPFLL---RNQNHDVTQNQPVSKTILCNKETVASK----DVEEKVLTTTSVNEVWEEESERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVEDGT-RANAAALSIDN 165
            E NN+FIMSH SS ESD  IPSHP        SKD NFE KQ+DPFLL   + QNHD         + LC KE +AS     DV+ K LTT    EV EE SERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDC+AFDAPL+PSKITMARAALV+ GT RANAA LSIDN
Sbjct:    3 ENNNLFIMSHHSSAESDDKIPSHP--------SKDANFERKQDDPFLLSTQKRQNHDDQDKDATQNSSLCKKEKMASVKDDVDVDAKELTTVDEEEV-EEVSERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCTAFDAPLIPSKITMARAALVQQGTARANAAPLSIDN 165

[Close]

BLAST of evm.Ca_v2.0_07802 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D4XQE2|A0A9D4XQE2_PEA (Protein BIC1 OS=Pisum sativum OX=3888 GN=KIW84_031334 PE=4 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 3.267e-59
Identity = 116/172 (67.44%), Postives = 125/172 (72.67%), Query Frame = 0

Query:    2 EKNNIFIMSHQSSIESDGMIPSHPLDSKNPHPSKDTNFEEKQEDPFLL---RNQNHDVTQNQPVSKTILCNKETVASK----DVEEKVLTTTSVNEVWEEESERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVEDGT-RANAAALSIDN 165
            E NN+FIMSH SS ESD  IPSHP        SKD NFE KQ+DPFLL   + QNHD         + LC KE +AS     DV+ K LTT    EV EE SERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDC+AFDAPL+PSKITMARAALV+ GT RANAA LSIDN
Sbjct:    3 ENNNLFIMSHHSSAESDDKIPSHP--------SKDANFERKQDDPFLLSTQKRQNHDDQDKDATQNSSLCKKEKMASVKDDVDVDAKELTTVDEEEV-EEVSERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCTAFDAPLIPSKITMARAALVQQGTARANAAPLSIDN 165

[Close]

BLAST of evm.Ca_v2.0_07802 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86VA78|A0AA86VA78_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS2799 PE=4 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.889e-54
Identity = 97/168 (57.74%), Postives = 119/168 (70.83%), Query Frame = 0

Query:    9 MSHQSSIESDGMIPSHPLDSKNPHPSKDT-NFEEKQEDPFLLRNQNHD-------VTQNQP-VSKTILCNKETVASKDVE--EKVLTTTSVNEVWEEESERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVEDGTRANAAALSIDN 165
            M+HQSS ESD  IPS  L+  +PHP KD  N E+KQ+    L   NHD       VT+  P  SK++LCN+E +A ++    + V   + V E  EE+S RERLKRHRVEVAGRVWIP++WGQEELLKDWIDC+AFDAPLVPS+I+ AR ALVE+ TRANAA L I+N
Sbjct:    1 MAHQSSAESDDRIPSKSLELNSPHPCKDIINMEQKQQQQEPLSKVNHDGMDREKGVTKQDPSASKSLLCNEEKMALQEAATMDGVGEESGVAEALEEDSGRERLKRHRVEVAGRVWIPDMWGQEELLKDWIDCTAFDAPLVPSRISTAREALVEECTRANAAGLRIEN 168

The following BLAST results are available for this feature:

BLAST of evm.Ca_v2.0_07802 vs. Araport11
BLAST of evm.Ca_v2.0_07802 vs. ExPASy Swiss-Prot (2024)
BLAST of evm.Ca_v2.0_07802 vs. ExPASy TrEMBL (2024)

BLAST of evm.Ca_v2.0_07802 vs. Araport11
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs arabidopsis Araport11)
Total hits: 2


Match Name	E-value	Identity	Description
\|	5.645e-29	44.76	Symbols: BIC1 \| Blue-light Inhibitor of Cryptochro...	[more]
\|	1.844e-16	59.65	Symbols: BIC2 \| Blue-light Inhibitor of Cryptochro...	[more]

BLAST of evm.Ca_v2.0_07802 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt Swissprot )
Total hits: 2


Match Name	E-value	Identity	Description
sp\|Q9LXJ1\|BIC1_ARATH	5.432e-28	44.76	Protein BIC1 OS=Arabidopsis thaliana OX=3702 GN=BI...	[more]
sp\|Q9M280\|BIC2_ARATH	1.779e-15	59.65	Protein BIC2 OS=Arabidopsis thaliana OX=3702 GN=BI...	[more]

BLAST of evm.Ca_v2.0_07802 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
tr\|A0A1S2XTB9\|A0A1S2XTB9_CICAR	1.756e-117	100.00	Protein BIC1-like OS=Cicer arietinum OX=3827 GN=LO...	[more]
tr\|A0A396H5Y6\|A0A396H5Y6_MEDTR	1.619e-76	66.67	Uncharacterized protein OS=Medicago truncatula OX=...	[more]
tr\|G7L635\|G7L635_MEDTR	3.689e-72	66.48	Plant/F3C22-140 protein, putative OS=Medicago trun...	[more]
tr\|A0A9D4XQA5\|A0A9D4XQA5_PEA	6.187e-68	67.74	Protein BIC1 OS=Pisum sativum OX=3888 GN=KIW84_031...	[more]
tr\|A0A2K3KYE8\|A0A2K3KYE8_TRIPR	1.234e-63	63.89	Protein BIC1-like OS=Trifolium pratense OX=57577 G...	[more]
tr\|A0A8B8L766\|A0A8B8L766_ABRPR	3.128e-60	63.53	Uncharacterized protein LOC113861742 OS=Abrus prec...	[more]
tr\|A0A9D4XS11\|A0A9D4XS11_PEA	6.934e-60	63.98	Protein BIC1 OS=Pisum sativum OX=3888 GN=KIW84_031...	[more]
tr\|A0A9D4XQX9\|A0A9D4XQX9_PEA	1.846e-59	67.44	Protein BIC1 OS=Pisum sativum OX=3888 GN=KIW84_031...	[more]
tr\|A0A9D4XQE2\|A0A9D4XQE2_PEA	3.267e-59	67.44	Protein BIC1 OS=Pisum sativum OX=3888 GN=KIW84_031...	[more]
tr\|A0AA86VA78\|A0AA86VA78_9FABA	1.889e-54	57.74	Uncharacterized protein OS=Sphenostylis stenocarpa...	[more]

InterPro

Analysis Name: InterProScan Analysis for Cicer arietinum cv. CDC Frontier genome v2.0
Date Performed: 2024-07-26


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040374	Protein BIC	PANTHER	PTHR34207	PROTEIN BIC1	coord: 30..166
None	No IPR available	CDD	cd22645	BIC1_CID	coord: 100..153 e-value: 1.30567E-30 score: 104.366

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Ca3_v2.0:71939327..71942519+
coding sequence from alignment at Ca3_v2.0:71939327..71942519+

mRNA sequence

>drCicArie.Frontier.2.0.Ca_v2.0_07802.2 ID=drCicArie.Frontier.2.0.Ca_v2.0_07802.2; Name=evm.Ca_v2.0_07802; organism=Cicer arietinum; type=mRNA; length=540bp
ATGGAAAAAAACAATATTTTCATAATGTCTCACCAATCCTCTATTGAATC
TGATGGCATGATTCCTTCACACCCATTGGACTCAAAAAATCCCCACCCAT
CAAAAGATACAAACTTTGAGGAAAAACAAGAAGACCCTTTTCTCTTGAGA
AACCAAAACCATGATGTAACCCAAAATCAACCTGTTTCAAAGACAATTCT
TTGCAACAAGGAGACAGTGGCATCTAAGGATGTTGAAGAAAAAGTGTTAA
CTACTACAAGTGTGAATGAAGTATGGGAAGAAGAGAGTGAAAGAGAGAGG
TTGAAGAGGCATAGAGTTGAAGTAGCTGGAAGGGTATGGATTCCTGAAAT
ATGGGGTCAAGAGGAATTATTGAAGGATTGGATAGATTGCAGTGCATTTG
ATGCTCCTTTAGTTCCAAGCAAGATCACTATGGCACGTGCTGCTTTGGTT
GAGGATGGTACTAGAGCCAATGCTGCTGCTCTAAGTATAGACAACAGTAT
CTATTGGGCCTTTACAAATGACTTACCTTGGATATACTAG

protein sequence of drCicArie.Frontier.2.0.Ca_v2.0_07802.2

>drCicArie.Frontier.2.0.Ca_v2.0_07802.2 ID=drCicArie.Frontier.2.0.Ca_v2.0_07802.2; Name=drCicArie.Frontier.2.0.Ca_v2.0_07802.2; organism=Cicer arietinum; type=polypeptide; length=179bp
MEKNNIFIMSHQSSIESDGMIPSHPLDSKNPHPSKDTNFEEKQEDPFLLR
NQNHDVTQNQPVSKTILCNKETVASKDVEEKVLTTTSVNEVWEEESERER
LKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALV
EDGTRANAAALSIDNSIYWAFTNDLPWIY

mRNA from alignment at Ca3_v2.0:71939327..71942519+

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>drCicArie.Frontier.2.0.Ca_v2.0_07802.2 ID=drCicArie.Frontier.2.0.Ca_v2.0_07802.2; Name=evm.Ca_v2.0_07802; organism=Cicer arietinum; type=mRNA; length=3193bp; location=Sequence derived from: Ca3_v2.0:71939327..71942519+ (Cicer arietinum
CACAACCCTCACATTTCAAATCTTCTCTACACAACACACATAAACTTAGA
CAAGGAGAAAACCTCTCTCTCTGCATGGAAAAAAACAATATTTTCATAAT
GTCTCACCAATCCTCTATTGAATCTGATGGCATGATTCCTTCACACCCAT
TGGACTCAAAAAATCCCCACCCATCAAAAGATACAAACTTTGAGGAAAAA
CAAGAAGACCCTTTTCTCTTGAGAAACCAAAACCATGATGTAACCCAAAA
TCAACCTGTTTCAAAGACAATTCTTTGCAACAAGGAGACAGTGGCATCTA
AGGATGTTGAAGAAAAAGTGTTAACTACTACAAGTGTGAATGAAGTATGG
GAAGAAGAGAGTGAAAGAGAGAGGTTGAAGAGGCATAGAGTTGAAGTAGC
TGGAAGGGTATGGATTCCTGAAATATGGGGTCAAGAGGAATTATTGAAGG
ATTGGATAGATTGCAGTGCATTTGATGCTCCTTTAGTTCCAAGCAAGATC
ACTATGGCACGTGCTGCTTTGGTTGAGGATGGTACTAGAGCCAATGCTGC
TGCTCTAAGTATAGACAACAGGTGTTAGAACTTTTTTTTTTTTTTTCATT
TCATTTATGTAATTCTGTTTATTCACAACCATATATTCATGATGGATGGC
TTTTTAATTAATCTTGATTTTTATATAATACAATCATTTTCTTCTTTATC
TCTTGAATGGGGCATTTCATAAACAATATTTTTGGGATTAAAAAAATGCC
AATGAAATTCTTCTATCCAAATAACTTTCACAAATGATCGCTCTCACATT
TCCTAAGTCCGACCATGGCCATCTATAATAATGTAAACTTGCAGCCTCTT
GGCAAACAATGCTCATAGTGTTACTATGAAAAACAGCAAATATCGATATT
TCAGATTAAAAAAATCTTGTCTTTATAACTATAAATCAAATTATAAACTC
GAACCATATTCAAGGTTCACCAATTTCAAGAAGAAAAAAACTTGTACATT
TGTTTAATCAAGATTCACCGAATTTCTAAATCAAACTGACGAGTTGTTTA
TGAAATGTTATAGTTGTTTATAAAACTCGTGAAAGAAAATGTCATGTAAC
CATCTGCACTATAATATTGAAGTACATCTAACTTTATGATGCTCAATATC
TGTATTTATGATGCTCATTTGTTAATATGTTAGTCCTCCATGTGCAGTAT
CTATTGGGCCTTTACAAATGACTTACCTTGGATATACTAGTGATGTCTAC
TTCTACTAATGCTAACAACTAGCAATATCCATCGGTTCAGAATACATTGT
ACAGAACTAAGGTCtgttatgttctgagaaaacatgtgttttctttttct
tgttttgactgataattacaaaattgtcttacttttattttgttatcttg
ttgaaaatgttattttcactattttcttatcaatctttgaaaaacacaaa
tgaaaataaagtaacatttctacaattatcagttaaaacaagaacgaaaa
gttctcaaacaaaTGCACTAGCTTTGCTACCCGTCAGAAAATGTGTGCAT
TGTGAAATTGCTCAATTGAGTCAATTCAATTACCAGTTGCTCTAATTAAG
GAAACCCCTGTTCCACATATTGAAGTATACATAATTTTGAGCAACTCTCG
AGAAAAATGCAATGTTTAGTTGACAATAAATATATTTTACAATCATAGTC
CGGACTTCCTCTTACAAAATACAATATTCAAATTATTACTAACTACTAAA
TCTATTTAAGAGAAAGAAAAATAACAATGAGGATGCCTGCACATCTAGCA
TTTCAACTATTAGGCTCCACCTGTATAAATTTATGTTGCTGATACAGCAA
ATATTCTAATGTAGTATCACCACTAAGAAATCAGATCCCACACCTTGATT
GTCCCATCATCGCTTGCAGAGGCTAGTAACGGCTTCTCCTATTCAATGGG
CAATTATAGGCAAAATATGTTGATTAACGACCAATTGCAGAGAAAAAAAC
ACAGCAAAAAAAAAATCCTGGAATAATTCACCATTCTCTAAATATTTAAG
TTCTTATAAGCTATCAAACTTAATTCCCAAAGGTCTGACACAATAGTAAC
TGCAAGTTTTATATTTACTGTATAGATGAAAATTTAAATGTTCTTTATGG
TGCAAATTCCCTGCCAACCCCCGTAACTCCACTAGCTGTAGATACCCTAC
TAATTACAACCTTTATTGATCGACTAGTACTAGTTAATTAGAGGGAAATT
CAAGAGGTCGAGCTTTAGAATCACACAGCCAGATATGAGAATTATTATCT
AATAATATTAGTTGTGGGATCTACCATTCCAGCCACTTGATTTTGTATAA
AGAGATACTCATTTCACCACCAATGTGATTTCACTAAAGTAGTGTCTAAG
ATACTTACCCCAGGGCTCCACTGCACAGAATTTATATCCATGTCATGTGC
CTTCTCCTTCTTCAATAGCAACTTGTACAGAGGACCATCAACCTATGTCA
TAAGCAAGCAGTAATATTAGGTCAATTTTAACCTGCTTCGTGATAGAGTG
AGATGCATCTACAATCTACAAGCATAAAATTATTTAAGAGATACTTCTAT
TGGTTTGTCATTATTTTCCTGTAATTTGCGCATACTTATATAAGTTTGAA
TTTTTCAGGGACATGGAATTCAATGTAAATAAGGATTTATCTCTTAATAA
CAACTGCACAAATGTTGATGTTCAAAACACTCGAGTTTTCAGACACCAAG
AAGAGCAACTAAACAAAAAGATCTGATTCAAGTCCATAAATGTATGAAGA
AAATGAGAAGAGCATTGTATTAAGAAAAACAGTGGAAACAAGCTGCTCCA
GTTCACCAGTAACCTTTGTGTTAGTCTCTTCAAAATAAAACAGTTCAAAG
AAAAGATACAGATAAATGAAGTTGCAAATACTGTTAACAGTATAGCTGTT
AGGTTGAGTTTTCTCTCCACTTAAGTTGTAAATGAAGAAACATTTGGCAT
TGGTTTGTTAAGTCTTTTGCTACACTTGTCCTTGTAATTGCAAGTACAAA
CTACAAAGAGACAAAATTATCAGTTTATCTATAAGCACAATTAGATAACA
GAATCATTAGGTGTCCATGACTTAAAGTGAATGGTTCTGCACCAGGAAAA
TGAACATGTAATGGACACAAAGAATCTGACGCTTCTATTTTCT

Coding sequence (CDS) from alignment at Ca3_v2.0:71939327..71942519+

>drCicArie.Frontier.2.0.Ca_v2.0_07802.2 ID=drCicArie.Frontier.2.0.Ca_v2.0_07802.2; Name=evm.Ca_v2.0_07802; organism=Cicer arietinum; type=CDS; length=540bp; location=Sequence derived from: Ca3_v2.0:71939327..71942519+ (Cicer arietinum
ATGGAAAAAAACAATATTTTCATAATGTCTCACCAATCCTCTATTGAATC
TGATGGCATGATTCCTTCACACCCATTGGACTCAAAAAATCCCCACCCAT
CAAAAGATACAAACTTTGAGGAAAAACAAGAAGACCCTTTTCTCTTGAGA
AACCAAAACCATGATGTAACCCAAAATCAACCTGTTTCAAAGACAATTCT
TTGCAACAAGGAGACAGTGGCATCTAAGGATGTTGAAGAAAAAGTGTTAA
CTACTACAAGTGTGAATGAAGTATGGGAAGAAGAGAGTGAAAGAGAGAGG
TTGAAGAGGCATAGAGTTGAAGTAGCTGGAAGGGTATGGATTCCTGAAAT
ATGGGGTCAAGAGGAATTATTGAAGGATTGGATAGATTGCAGTGCATTTG
ATGCTCCTTTAGTTCCAAGCAAGATCACTATGGCACGTGCTGCTTTGGTT
GAGGATGGTACTAGAGCCAATGCTGCTGCTCTAAGTATAGACAACAGTAT
CTATTGGGCCTTTACAAATGACTTACCTTGGATATACTAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR040374	BIC

Vocabulary: **Biological Process**
Term	Definition
GO:0009785	blue light signaling pathway

Search form

evm.Ca_v2.0_07802