evm.Ca_v2.0_07802
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of evm.Ca_v2.0_07802 vs. Araport11
Match: | (Symbols: BIC1 | Blue-light Inhibitor of Cryptochromes 1 | chr3:19546446-19546868 REVERSE LENGTH=140) HSP 1 Score: 104.76 bits (260), Expect = 5.645e-29 Identity = 64/143 (44.76%), Postives = 86/143 (60.14%), Query Frame = 0 Query: 23 SHPLDSKNPHPSKDTNFEEKQEDPFLLRNQNHDVTQNQPVSKTILCNKETVASKDVEEKVLTTTSVNEVWEEESERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVEDGTRANAAALSIDN 165
+HP+ P PS T KQ+ P L Q + ++ +K+ +A +EEK + + V ++ RERLK+HR E+AGRVWIPEIWGQEELLKDWIDCS FD LVP+ I+ AR ALVE+ RA +A+ + N
Sbjct: 12 AHPIGPSQP-PSDQT----KQDPPSL----------PQEAASSVSADKKDLAL--LEEKPKQSQEEDRV---DTGRERLKKHRREIAGRVWIPEIWGQEELLKDWIDCSTFDTCLVPAGISSARTALVEEARRAASASGGLHN 134
BLAST of evm.Ca_v2.0_07802 vs. Araport11
Match: | (Symbols: BIC2 | Blue-light Inhibitor of Cryptochromes 2 | chr3:16074228-16074578 REVERSE LENGTH=116) HSP 1 Score: 72.0182 bits (175), Expect = 1.844e-16 Identity = 34/57 (59.65%), Postives = 41/57 (71.93%), Query Frame = 0 Query: 96 SERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVED 152
S R+RLKRHR EVAG+V IP+ WG+E LL W+D S FDA S+I ARAAL+ D
Sbjct: 39 SGRDRLKRHREEVAGKVPIPDSWGKEGLLMGWMDFSTFDAAFTSSQIVSARAALMAD 95
BLAST of evm.Ca_v2.0_07802 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9LXJ1|BIC1_ARATH (Protein BIC1 OS=Arabidopsis thaliana OX=3702 GN=BIC1 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.432e-28 Identity = 64/143 (44.76%), Postives = 86/143 (60.14%), Query Frame = 0 Query: 23 SHPLDSKNPHPSKDTNFEEKQEDPFLLRNQNHDVTQNQPVSKTILCNKETVASKDVEEKVLTTTSVNEVWEEESERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVEDGTRANAAALSIDN 165
+HP+ P PS T KQ+ P L Q + ++ +K+ +A +EEK + + V ++ RERLK+HR E+AGRVWIPEIWGQEELLKDWIDCS FD LVP+ I+ AR ALVE+ RA +A+ + N
Sbjct: 12 AHPIGPSQP-PSDQT----KQDPPSL----------PQEAASSVSADKKDLAL--LEEKPKQSQEEDRV---DTGRERLKKHRREIAGRVWIPEIWGQEELLKDWIDCSTFDTCLVPAGISSARTALVEEARRAASASGGLHN 134
BLAST of evm.Ca_v2.0_07802 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9M280|BIC2_ARATH (Protein BIC2 OS=Arabidopsis thaliana OX=3702 GN=BIC2 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.779e-15 Identity = 34/57 (59.65%), Postives = 41/57 (71.93%), Query Frame = 0 Query: 96 SERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVED 152
S R+RLKRHR EVAG+V IP+ WG+E LL W+D S FDA S+I ARAAL+ D
Sbjct: 39 SGRDRLKRHREEVAGKVPIPDSWGKEGLLMGWMDFSTFDAAFTSSQIVSARAALMAD 95
BLAST of evm.Ca_v2.0_07802 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2XTB9|A0A1S2XTB9_CICAR (Protein BIC1-like OS=Cicer arietinum OX=3827 GN=LOC101508117 PE=4 SV=1) HSP 1 Score: 340.887 bits (873), Expect = 1.756e-117 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0 Query: 1 MEKNNIFIMSHQSSIESDGMIPSHPLDSKNPHPSKDTNFEEKQEDPFLLRNQNHDVTQNQPVSKTILCNKETVASKDVEEKVLTTTSVNEVWEEESERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVEDGTRANAAALSIDN 165
MEKNNIFIMSHQSSIESDGMIPSHPLDSKNPHPSKDTNFEEKQEDPFLLRNQNHDVTQNQPVSKTILCNKETVASKDVEEKVLTTTSVNEVWEEESERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVEDGTRANAAALSIDN
Sbjct: 1 MEKNNIFIMSHQSSIESDGMIPSHPLDSKNPHPSKDTNFEEKQEDPFLLRNQNHDVTQNQPVSKTILCNKETVASKDVEEKVLTTTSVNEVWEEESERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVEDGTRANAAALSIDN 165
BLAST of evm.Ca_v2.0_07802 vs. ExPASy TrEMBL (2024)
Match: tr|A0A396H5Y6|A0A396H5Y6_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr7g0266241 PE=4 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.619e-76 Identity = 124/186 (66.67%), Postives = 137/186 (73.66%), Query Frame = 0 Query: 2 EKNNIFIMSHQSSIESDGMIPSHPLDSKNPHPSKDTNFEEKQEDPFLL---RNQNHDVTQNQPVS-KTILCNKETVA----------SKDVEEKVLTTTSVNEVWEEESERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVEDGTRANAAALSIDNSIYWAFTN 173
E NN+FIMSHQSS+ESD IPSHPLDSK PH SKD N E KQ+DP L + QNHD ++LCNKE +A DVE K LTT EE+SERERLKRHRVEVAGRVWIPEIWGQE+LLKDWIDC+AFDAPLVPSKITMARAALVE+GT+ NAA LSI NSIYWAF+N
Sbjct: 3 ENNNLFIMSHQSSVESDDKIPSHPLDSKKPHSSKDVNLETKQDDPPFLNTQKVQNHDDKDKDATQYPSLLCNKEKMALLQELAPVSSMDDVEAKELTTMDEALDLEEDSERERLKRHRVEVAGRVWIPEIWGQEDLLKDWIDCTAFDAPLVPSKITMARAALVEEGTKTNAAPLSIHNSIYWAFSN 188
BLAST of evm.Ca_v2.0_07802 vs. ExPASy TrEMBL (2024)
Match: tr|G7L635|G7L635_MEDTR (Plant/F3C22-140 protein, putative OS=Medicago truncatula OX=3880 GN=MTR_7g104540 PE=4 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 3.689e-72 Identity = 119/179 (66.48%), Postives = 131/179 (73.18%), Query Frame = 0 Query: 9 MSHQSSIESDGMIPSHPLDSKNPHPSKDTNFEEKQEDPFLL---RNQNHDVTQNQPVS-KTILCNKETVA----------SKDVEEKVLTTTSVNEVWEEESERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVEDGTRANAAALSIDNSIYWAFTN 173
MSHQSS+ESD IPSHPLDSK PH SKD N E KQ+DP L + QNHD ++LCNKE +A DVE K LTT EE+SERERLKRHRVEVAGRVWIPEIWGQE+LLKDWIDC+AFDAPLVPSKITMARAALVE+GT+ NAA LSI NSIYWAF+N
Sbjct: 1 MSHQSSVESDDKIPSHPLDSKKPHSSKDVNLETKQDDPPFLNTQKVQNHDDKDKDATQYPSLLCNKEKMALLQELAPVSSMDDVEAKELTTMDEALDLEEDSERERLKRHRVEVAGRVWIPEIWGQEDLLKDWIDCTAFDAPLVPSKITMARAALVEEGTKTNAAPLSIHNSIYWAFSN 179
BLAST of evm.Ca_v2.0_07802 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D4XQA5|A0A9D4XQA5_PEA (Protein BIC1 OS=Pisum sativum OX=3888 GN=KIW84_031334 PE=4 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 6.187e-68 Identity = 126/186 (67.74%), Postives = 136/186 (73.12%), Query Frame = 0 Query: 2 EKNNIFIMSHQSSIESDGMIPSHPLDSKNPHPSKDTNFEEKQEDPFLL---RNQNHDVTQNQPVSKTILCNKETVASK----DVEEKVLTTTSVNEVWEEESERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVEDGT-RANAAALSIDNSIYWAFTNDLPWIY 179
E NN+FIMSH SS ESD IPSHP SKD NFE KQ+DPFLL + QNHD + LC KE +AS DV+ K LTT EV EE SERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDC+AFDAPL+PSKITMARAALV+ GT RANAA LSIDNS+Y AFTN L WIY
Sbjct: 3 ENNNLFIMSHHSSAESDDKIPSHP--------SKDANFERKQDDPFLLSTQKRQNHDDQDKDATQNSSLCKKEKMASVKDDVDVDAKELTTVDEEEV-EEVSERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCTAFDAPLIPSKITMARAALVQQGTARANAAPLSIDNSMYSAFTNGLHWIY 179
BLAST of evm.Ca_v2.0_07802 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2K3KYE8|A0A2K3KYE8_TRIPR (Protein BIC1-like OS=Trifolium pratense OX=57577 GN=L195_g027187 PE=4 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.234e-63 Identity = 115/180 (63.89%), Postives = 131/180 (72.78%), Query Frame = 0 Query: 2 EKNNIFIMSHQSSIESDGMIPSHPLDSKNPHPSKD-TNFEEKQEDPFLL---RNQNHD------------VTQNQPVSKTILCNKETVASKDVEEKVLTTTSVNEVWEEESERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVEDGTRANAAALSIDN 165
E NN+FIMSHQSS ESD IPSHPLD K PH SKD NFE++QE+PF L ++QNHD TQN ++LCNKE + D E K LT+ EE SERERLKRHRVEVAGRVWIPEIWGQE+LLK+WIDC+AFDAPLVPSKITMARAALV++GT+ NA LSIDN
Sbjct: 3 ENNNLFIMSHQSSAESDDKIPSHPLDIKVPHSSKDHVNFEKEQENPFSLNTQKSQNHDEDDEDKDKDKDATTQN----PSLLCNKEKI---DDEAKELTSV------EEVSERERLKRHRVEVAGRVWIPEIWGQEDLLKNWIDCTAFDAPLVPSKITMARAALVQEGTKTNATPLSIDN 169
BLAST of evm.Ca_v2.0_07802 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8L766|A0A8B8L766_ABRPR (Uncharacterized protein LOC113861742 OS=Abrus precatorius OX=3816 GN=LOC113861742 PE=4 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 3.128e-60 Identity = 108/170 (63.53%), Postives = 122/170 (71.76%), Query Frame = 0 Query: 9 MSHQSSIESDGMIPSHPLDSKNPHPSKDT-NFEEKQEDPFLLRNQNHD------VTQNQPVSKTILCNKETVASK------DVEEKVLTTTSVNEVWEEESERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVEDGTRANAAALSIDN 165
M+HQS ES IPS PLD +PHPSKD N E++QE+ L ++HD VTQN SKT+ CNKE VA K DV EK TSV E E+S RERLKRHRVEVAGRVWIPEIWGQEELLKDWIDC+AFDAPLVPS ITMARAALVE+ +RANAA + I+N
Sbjct: 1 MAHQSPSESHHQIPSQPLDLNSPHPSKDNINMEQEQEEGPFLSTRSHDDDRDKDVTQNPSASKTLFCNKEKVALKEPSHAMDVAEK----TSVAEALGEDSGRERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCTAFDAPLVPSTITMARAALVEECSRANAAGVRIEN 166
BLAST of evm.Ca_v2.0_07802 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D4XS11|A0A9D4XS11_PEA (Protein BIC1 OS=Pisum sativum OX=3888 GN=KIW84_031334 PE=4 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 6.934e-60 Identity = 119/186 (63.98%), Postives = 132/186 (70.97%), Query Frame = 0 Query: 2 EKNNIFIMSHQSSIESDGMIPSHPLDSKNPHPSKDTNFEEKQEDPFLL---RNQNHDVTQNQPVSKTILCNKETVASK----DVEEKVLTTTSVNEVWEEESERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVEDGT-RANAAALSIDNSIYWAFTNDLPWIY 179
E NN+FIMSH SS ESD IPSHP SKD NFE KQ+DPFLL + QNHD + LC KE +AS DV+ K LTT EV EE SERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDC+AFDAPL+PSKITMARAALV+ GT RANAA LSIDN + + +N+ IY
Sbjct: 3 ENNNLFIMSHHSSAESDDKIPSHP--------SKDANFERKQDDPFLLSTQKRQNHDDQDKDATQNSSLCKKEKMASVKDDVDVDAKELTTVDEEEV-EEVSERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCTAFDAPLIPSKITMARAALVQQGTARANAAPLSIDNRLV-SLSNNPSHIY 178
BLAST of evm.Ca_v2.0_07802 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D4XQX9|A0A9D4XQX9_PEA (Protein BIC1 OS=Pisum sativum OX=3888 GN=KIW84_031334 PE=4 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.846e-59 Identity = 116/172 (67.44%), Postives = 125/172 (72.67%), Query Frame = 0 Query: 2 EKNNIFIMSHQSSIESDGMIPSHPLDSKNPHPSKDTNFEEKQEDPFLL---RNQNHDVTQNQPVSKTILCNKETVASK----DVEEKVLTTTSVNEVWEEESERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVEDGT-RANAAALSIDN 165
E NN+FIMSH SS ESD IPSHP SKD NFE KQ+DPFLL + QNHD + LC KE +AS DV+ K LTT EV EE SERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDC+AFDAPL+PSKITMARAALV+ GT RANAA LSIDN
Sbjct: 3 ENNNLFIMSHHSSAESDDKIPSHP--------SKDANFERKQDDPFLLSTQKRQNHDDQDKDATQNSSLCKKEKMASVKDDVDVDAKELTTVDEEEV-EEVSERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCTAFDAPLIPSKITMARAALVQQGTARANAAPLSIDN 165
BLAST of evm.Ca_v2.0_07802 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D4XQE2|A0A9D4XQE2_PEA (Protein BIC1 OS=Pisum sativum OX=3888 GN=KIW84_031334 PE=4 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 3.267e-59 Identity = 116/172 (67.44%), Postives = 125/172 (72.67%), Query Frame = 0 Query: 2 EKNNIFIMSHQSSIESDGMIPSHPLDSKNPHPSKDTNFEEKQEDPFLL---RNQNHDVTQNQPVSKTILCNKETVASK----DVEEKVLTTTSVNEVWEEESERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVEDGT-RANAAALSIDN 165
E NN+FIMSH SS ESD IPSHP SKD NFE KQ+DPFLL + QNHD + LC KE +AS DV+ K LTT EV EE SERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDC+AFDAPL+PSKITMARAALV+ GT RANAA LSIDN
Sbjct: 3 ENNNLFIMSHHSSAESDDKIPSHP--------SKDANFERKQDDPFLLSTQKRQNHDDQDKDATQNSSLCKKEKMASVKDDVDVDAKELTTVDEEEV-EEVSERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCTAFDAPLIPSKITMARAALVQQGTARANAAPLSIDN 165
BLAST of evm.Ca_v2.0_07802 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86VA78|A0AA86VA78_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS2799 PE=4 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.889e-54 Identity = 97/168 (57.74%), Postives = 119/168 (70.83%), Query Frame = 0 Query: 9 MSHQSSIESDGMIPSHPLDSKNPHPSKDT-NFEEKQEDPFLLRNQNHD-------VTQNQP-VSKTILCNKETVASKDVE--EKVLTTTSVNEVWEEESERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCSAFDAPLVPSKITMARAALVEDGTRANAAALSIDN 165
M+HQSS ESD IPS L+ +PHP KD N E+KQ+ L NHD VT+ P SK++LCN+E +A ++ + V + V E EE+S RERLKRHRVEVAGRVWIP++WGQEELLKDWIDC+AFDAPLVPS+I+ AR ALVE+ TRANAA L I+N
Sbjct: 1 MAHQSSAESDDRIPSKSLELNSPHPCKDIINMEQKQQQQEPLSKVNHDGMDREKGVTKQDPSASKSLLCNEEKMALQEAATMDGVGEESGVAEALEEDSGRERLKRHRVEVAGRVWIPDMWGQEELLKDWIDCTAFDAPLVPSRISTAREALVEECTRANAAGLRIEN 168 The following BLAST results are available for this feature:
BLAST of evm.Ca_v2.0_07802 vs. Araport11
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs arabidopsis Araport11) Total hits: 2 Position : 0 Zoom : x 1
BLAST of evm.Ca_v2.0_07802 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt Swissprot ) Total hits: 2 Position : 0 Zoom : x 1
BLAST of evm.Ca_v2.0_07802 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum cv. CDC Frontier genome v2.0
Date Performed: 2024-07-26 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >drCicArie.Frontier.2.0.Ca_v2.0_07802.2 ID=drCicArie.Frontier.2.0.Ca_v2.0_07802.2; Name=evm.Ca_v2.0_07802; organism=Cicer arietinum; type=mRNA; length=540bpback to top protein sequence of drCicArie.Frontier.2.0.Ca_v2.0_07802.2 >drCicArie.Frontier.2.0.Ca_v2.0_07802.2 ID=drCicArie.Frontier.2.0.Ca_v2.0_07802.2; Name=drCicArie.Frontier.2.0.Ca_v2.0_07802.2; organism=Cicer arietinum; type=polypeptide; length=179bpback to top mRNA from alignment at Ca3_v2.0:71939327..71942519+ Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>drCicArie.Frontier.2.0.Ca_v2.0_07802.2 ID=drCicArie.Frontier.2.0.Ca_v2.0_07802.2; Name=evm.Ca_v2.0_07802; organism=Cicer arietinum; type=mRNA; length=3193bp; location=Sequence derived from: Ca3_v2.0:71939327..71942519+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca3_v2.0:71939327..71942519+ >drCicArie.Frontier.2.0.Ca_v2.0_07802.2 ID=drCicArie.Frontier.2.0.Ca_v2.0_07802.2; Name=evm.Ca_v2.0_07802; organism=Cicer arietinum; type=CDS; length=540bp; location=Sequence derived from: Ca3_v2.0:71939327..71942519+ (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|