evm.Ca_v2.0_07828

Transcript Overview
Nameevm.Ca_v2.0_07828
Unique NamedrCicArie.Frontier.2.0.Ca_v2.0_07828.2
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length381
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca3_v2.0chromosomeCa3_v2.0:72117072..72120936 -Cicer arietinum cv. CDC Frontier genome v2.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
carccaR157Cajanus cajan cv. Asha genome v2.0Cajanus cajan
carccaR166Cajanus cajan cv. Asha genome v2.0Cajanus cajan
carccaR177Cajanus cajan cv. Asha genome v2.0Cajanus cajan
carccaR187Cajanus cajan cv. Asha genome v2.0Cajanus cajan
carvumR231Vigna umbellata FF25 genome v1.0Vigna umbellata
carvumR261Vigna umbellata FF25 genome v1.0Vigna umbellata
carvumR263Vigna umbellata FF25 genome v1.0Vigna umbellata
carvvaR147Vicia villosa cv. AU Merit genome v1.0Vicia villosa
carvvaR161Vicia villosa cv. AU Merit genome v1.0Vicia villosa
carvvaR176Vicia villosa cv. AU Merit genome v1.0Vicia villosa
carvvaR197Vicia villosa cv. AU Merit genome v1.0Vicia villosa
carvasR203Vigna angularis cv. Shumari genome v1.a1Vigna angularis
carvstR214Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
carvasR234Vigna angularis cv. Shumari genome v1.a1Vigna angularis
carvasR237Vigna angularis cv. Shumari genome v1.a1Vigna angularis
carvstR243Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
carvstR246Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
carvunR144Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
carpvfR193Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
carvunR162Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
carvunR181Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
carpvfR221Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
carpvfR239Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
evm.Ca_v2.0_07828drCicArie.Frontier.2.0.Ca_v2.0_07828Cicer arietinumgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.Ca_v2.0_07828.2.exon5drCicArie.Frontier.2.0.Ca_v2.0_07828.2.exon5Cicer arietinumexon
drCicArie.Frontier.2.0.Ca_v2.0_07828.2.exon4drCicArie.Frontier.2.0.Ca_v2.0_07828.2.exon4Cicer arietinumexon
drCicArie.Frontier.2.0.Ca_v2.0_07828.2.exon3drCicArie.Frontier.2.0.Ca_v2.0_07828.2.exon3Cicer arietinumexon
drCicArie.Frontier.2.0.Ca_v2.0_07828.2.exon2drCicArie.Frontier.2.0.Ca_v2.0_07828.2.exon2Cicer arietinumexon
drCicArie.Frontier.2.0.Ca_v2.0_07828.2.exon1drCicArie.Frontier.2.0.Ca_v2.0_07828.2.exon1Cicer arietinumexon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.Ca_v2.0_07828.2.utr3p1drCicArie.Frontier.2.0.Ca_v2.0_07828.2.utr3p1Cicer arietinumthree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.cds.Ca_v2.0_07828.2drCicArie.Frontier.2.0.cds.Ca_v2.0_07828.2Cicer arietinumCDS
drCicArie.Frontier.2.0.cds.Ca_v2.0_07828.2drCicArie.Frontier.2.0.cds.Ca_v2.0_07828.2_2Cicer arietinumCDS
drCicArie.Frontier.2.0.cds.Ca_v2.0_07828.2drCicArie.Frontier.2.0.cds.Ca_v2.0_07828.2_3Cicer arietinumCDS
drCicArie.Frontier.2.0.cds.Ca_v2.0_07828.2drCicArie.Frontier.2.0.cds.Ca_v2.0_07828.2_4Cicer arietinumCDS
drCicArie.Frontier.2.0.cds.Ca_v2.0_07828.2drCicArie.Frontier.2.0.cds.Ca_v2.0_07828.2_5Cicer arietinumCDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.Ca_v2.0_07828.2.utr5p1drCicArie.Frontier.2.0.Ca_v2.0_07828.2.utr5p1Cicer arietinumfive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.Ca_v2.0_07828.2drCicArie.Frontier.2.0.Ca_v2.0_07828.2Cicer arietinumpolypeptide
drCicArie.Frontier.2.0.Ca_v2.0_07828.2drCicArie.Frontier.2.0.Ca_v2.0_07828.2-proteinCicer arietinumpolypeptide


Homology
[Close]
BLAST of evm.Ca_v2.0_07828 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:3628801-3629885 REVERSE LENGTH=113)

HSP 1 Score: 211.075 bits (536), Expect = 4.459e-72
Identity = 99/113 (87.61%), Postives = 108/113 (95.58%), Query Frame = 0 
Query:   14 MFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWMDAAKFLTGASAMGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVMCFHQASLDDDW 126
            MFS+SILLQILACAIY NWWPMLSALMYV+VPMPC+FFGGGSTQFL+SRDGGGW+DAAKFLTGAS +GS+AIPIIL+HA MIETGAMLIE  SFFIFICTVMCFH+ASLDDDW
Sbjct:    1 MFSSSILLQILACAIYGNWWPMLSALMYVVVPMPCMFFGGGSTQFLISRDGGGWIDAAKFLTGASTVGSLAIPIILRHAQMIETGAMLIEFTSFFIFICTVMCFHRASLDDDW 113
[Close]
BLAST of evm.Ca_v2.0_07828 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:3628801-3629885 REVERSE LENGTH=113)

HSP 1 Score: 211.075 bits (536), Expect = 4.459e-72
Identity = 99/113 (87.61%), Postives = 108/113 (95.58%), Query Frame = 0 
Query:   14 MFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWMDAAKFLTGASAMGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVMCFHQASLDDDW 126
            MFS+SILLQILACAIY NWWPMLSALMYV+VPMPC+FFGGGSTQFL+SRDGGGW+DAAKFLTGAS +GS+AIPIIL+HA MIETGAMLIE  SFFIFICTVMCFH+ASLDDDW
Sbjct:    1 MFSSSILLQILACAIYGNWWPMLSALMYVVVPMPCMFFGGGSTQFLISRDGGGWIDAAKFLTGASTVGSLAIPIILRHAQMIETGAMLIEFTSFFIFICTVMCFHRASLDDDW 113
[Close]
BLAST of evm.Ca_v2.0_07828 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:3628801-3629158 REVERSE LENGTH=92)

HSP 1 Score: 171.4 bits (433), Expect = 1.089e-56
Identity = 80/92 (86.96%), Postives = 88/92 (95.65%), Query Frame = 0 
Query:   35 MLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWMDAAKFLTGASAMGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVMCFHQASLDDDW 126
            MLSALMYV+VPMPC+FFGGGSTQFL+SRDGGGW+DAAKFLTGAS +GS+AIPIIL+HA MIETGAMLIE  SFFIFICTVMCFH+ASLDDDW
Sbjct:    1 MLSALMYVVVPMPCMFFGGGSTQFLISRDGGGWIDAAKFLTGASTVGSLAIPIILRHAQMIETGAMLIEFTSFFIFICTVMCFHRASLDDDW 92
[Close]
BLAST of evm.Ca_v2.0_07828 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:11694398-11695297 FORWARD LENGTH=140)

HSP 1 Score: 127.487 bits (319), Expect = 1.371e-38
Identity = 63/117 (53.85%), Postives = 85/117 (72.65%), Query Frame = 0 
Query:    8 LAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWMDAAKFLTGASAMGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVM---CFHQAS 121
            +A LA + S  I+LQILACA++NNWWPMLS +MYVL+PMP LFFGG  +  L +     W++AAKFLTGASA+GS+AIP ILKHA +I  GA+ ++L S+ +F+  ++   C   AS
Sbjct:   17 IAFLAILVSTGIVLQILACALFNNWWPMLSVIMYVLLPMPLLFFGGSDSTSLFNESDNSWINAAKFLTGASAVGSVAIPSILKHAGLIGWGALALDLSSYVVFLVAILGYICIGDAS 133
[Close]
BLAST of evm.Ca_v2.0_07828 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:11694398-11695297 FORWARD LENGTH=140)

HSP 1 Score: 127.487 bits (319), Expect = 1.371e-38
Identity = 63/117 (53.85%), Postives = 85/117 (72.65%), Query Frame = 0 
Query:    8 LAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWMDAAKFLTGASAMGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVM---CFHQAS 121
            +A LA + S  I+LQILACA++NNWWPMLS +MYVL+PMP LFFGG  +  L +     W++AAKFLTGASA+GS+AIP ILKHA +I  GA+ ++L S+ +F+  ++   C   AS
Sbjct:   17 IAFLAILVSTGIVLQILACALFNNWWPMLSVIMYVLLPMPLLFFGGSDSTSLFNESDNSWINAAKFLTGASAVGSVAIPSILKHAGLIGWGALALDLSSYVVFLVAILGYICIGDAS 133
[Close]
BLAST of evm.Ca_v2.0_07828 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:11694398-11695297 FORWARD LENGTH=140)

HSP 1 Score: 127.487 bits (319), Expect = 1.371e-38
Identity = 63/117 (53.85%), Postives = 85/117 (72.65%), Query Frame = 0 
Query:    8 LAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWMDAAKFLTGASAMGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVM---CFHQAS 121
            +A LA + S  I+LQILACA++NNWWPMLS +MYVL+PMP LFFGG  +  L +     W++AAKFLTGASA+GS+AIP ILKHA +I  GA+ ++L S+ +F+  ++   C   AS
Sbjct:   17 IAFLAILVSTGIVLQILACALFNNWWPMLSVIMYVLLPMPLLFFGGSDSTSLFNESDNSWINAAKFLTGASAVGSVAIPSILKHAGLIGWGALALDLSSYVVFLVAILGYICIGDAS 133
[Close]
BLAST of evm.Ca_v2.0_07828 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:11694398-11695297 FORWARD LENGTH=140)

HSP 1 Score: 127.487 bits (319), Expect = 1.371e-38
Identity = 63/117 (53.85%), Postives = 85/117 (72.65%), Query Frame = 0 
Query:    8 LAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWMDAAKFLTGASAMGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVM---CFHQAS 121
            +A LA + S  I+LQILACA++NNWWPMLS +MYVL+PMP LFFGG  +  L +     W++AAKFLTGASA+GS+AIP ILKHA +I  GA+ ++L S+ +F+  ++   C   AS
Sbjct:   17 IAFLAILVSTGIVLQILACALFNNWWPMLSVIMYVLLPMPLLFFGGSDSTSLFNESDNSWINAAKFLTGASAVGSVAIPSILKHAGLIGWGALALDLSSYVVFLVAILGYICIGDAS 133
[Close]
BLAST of evm.Ca_v2.0_07828 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:11694398-11695297 FORWARD LENGTH=140)

HSP 1 Score: 127.487 bits (319), Expect = 1.371e-38
Identity = 63/117 (53.85%), Postives = 85/117 (72.65%), Query Frame = 0 
Query:    8 LAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWMDAAKFLTGASAMGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVM---CFHQAS 121
            +A LA + S  I+LQILACA++NNWWPMLS +MYVL+PMP LFFGG  +  L +     W++AAKFLTGASA+GS+AIP ILKHA +I  GA+ ++L S+ +F+  ++   C   AS
Sbjct:   17 IAFLAILVSTGIVLQILACALFNNWWPMLSVIMYVLLPMPLLFFGGSDSTSLFNESDNSWINAAKFLTGASAVGSVAIPSILKHAGLIGWGALALDLSSYVVFLVAILGYICIGDAS 133
[Close]
BLAST of evm.Ca_v2.0_07828 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9AST6|VSP55_ARATH (Vacuolar protein sorting-associated protein 55 homolog OS=Arabidopsis thaliana OX=3702 GN=At1g32410 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.317e-37
Identity = 63/117 (53.85%), Postives = 85/117 (72.65%), Query Frame = 0 
Query:    8 LAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWMDAAKFLTGASAMGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVM---CFHQAS 121
            +A LA + S  I+LQILACA++NNWWPMLS +MYVL+PMP LFFGG  +  L +     W++AAKFLTGASA+GS+AIP ILKHA +I  GA+ ++L S+ +F+  ++   C   AS
Sbjct:   17 IAFLAILVSTGIVLQILACALFNNWWPMLSVIMYVLLPMPLLFFGGSDSTSLFNESDNSWINAAKFLTGASAVGSVAIPSILKHAGLIGWGALALDLSSYVVFLVAILGYICIGDAS 133
[Close]
BLAST of evm.Ca_v2.0_07828 vs. ExPASy Swiss-Prot (2024)
Match: sp|P47111|VPS55_YEAST (Vacuolar protein sorting-associated protein 55 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=VPS55 PE=1 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 1.737e-10
Identity = 30/93 (32.26%), Postives = 49/93 (52.69%), Query Frame = 0 
Query:    6 TVLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGS---TQFLMSRDGGGWMDAAKFLTGASAMGSIAIPIILKHAHMI 95
            T +  L+   +   LL IL+CA+++N++P+   L+++L P+P   F  G+   T   MS       D A FLTG      IA+P++  H  +I
Sbjct:   10 TKIISLSGFLALGFLLVILSCALFHNYYPLFDILIFLLAPIPNTIFNAGNKYHTSDFMSDSSNTGQDLAHFLTGMLVTSGIALPVVFYHCQLI 102
[Close]
BLAST of evm.Ca_v2.0_07828 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9UUH1|VPS55_SCHPO (Vacuolar protein sorting-associated protein 55 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=vps55 PE=3 SV=2)

HSP 1 Score: 56.225 bits (134), Expect = 5.741e-10
Identity = 34/113 (30.09%), Postives = 57/113 (50.44%), Query Frame = 0 
Query:   10 GLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGST--QFLMSRDGGGWMDAAKFLTGASAMGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVMCFHQA 120
            GL+ + +   +L IL+CA++ NW+P+L  + ++L P+P L     ST   FL   D    +D  +F  GA+     A+PI+  +  +I T A  +  V   I    +  + QA
Sbjct:    9 GLSSVLAVGFMLVILSCALFKNWYPLLIVIPFILAPLPNLLTKKYSTSHDFLQEED-RNLLDFGRFTFGATICTGFALPIVFVNVGLIGTAAATMSCVGGSIIFLVITLYSQA 120
[Close]
BLAST of evm.Ca_v2.0_07828 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q54VP1|VPS55_DICDI (Vacuolar protein sorting-associated protein 55 homolog OS=Dictyostelium discoideum OX=44689 GN=vps55 PE=3 SV=1)

HSP 1 Score: 48.9062 bits (115), Expect = 3.265e-7
Identity = 33/121 (27.27%), Postives = 56/121 (46.28%), Query Frame = 0 
Query:    8 LAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWMDAAKFLTGASAMGSIAIPIILKHAHMIETGAMLIEL---VSFFIFICTVMCFHQASLDDD 125
            + G +  F+  +L  ILAC + ++ +P++    Y L P P +      +    S + G + D   FLTG       AIP+IL H+ +I   A+   +   V+ +  I T + F     D+D
Sbjct:    5 IKGFSCAFAVGLLFNILACIVSHSGYPIIVVASYFLAPFPNILCRNRDS---FSSEKGTFEDIGLFLTGLFITSGFAIPMILAHSDIISGKALAFSMAGGVTVYATIITFLWFFNRHNDED 122
[Close]
BLAST of evm.Ca_v2.0_07828 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3RZD2|A0A0S3RZD2_PHAAN (Vacuolar protein sorting-associated protein 55 homolog OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G348500 PE=3 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.421e-80
Identity = 118/123 (95.93%), Postives = 123/123 (100.00%), Query Frame = 0 
Query:    4 VFTVLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWMDAAKFLTGASAMGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVMCFHQASLDDDW 126
            VF+VLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGW+DAAKFLTGASA+GSIAIPIILKHAHMIETGAMLIELVSFFIFICTV+CFHQA+LDDDW
Sbjct:   37 VFSVLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWIDAAKFLTGASAVGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVLCFHQANLDDDW 159
[Close]
BLAST of evm.Ca_v2.0_07828 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0L230|A0A8T0L230_PHAAN (Vacuolar protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0054730 PE=3 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.421e-80
Identity = 118/123 (95.93%), Postives = 123/123 (100.00%), Query Frame = 0 
Query:    4 VFTVLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWMDAAKFLTGASAMGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVMCFHQASLDDDW 126
            VF+VLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGW+DAAKFLTGASA+GSIAIPIILKHAHMIETGAMLIELVSFFIFICTV+CFHQA+LDDDW
Sbjct:   37 VFSVLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWIDAAKFLTGASAVGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVLCFHQANLDDDW 159
[Close]
BLAST of evm.Ca_v2.0_07828 vs. ExPASy TrEMBL (2024)
Match: tr|B7FF98|B7FF98_MEDTR (Vacuolar protein sorting 55 protein OS=Medicago truncatula OX=3880 PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.219e-79
Identity = 116/120 (96.67%), Postives = 120/120 (100.00%), Query Frame = 0 
Query:    7 VLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWMDAAKFLTGASAMGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVMCFHQASLDDDW 126
            VLAGLAFMFS+SILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFL+SRDGGGWMDAAKFLTGAS+MGSIAIPIIL+HAHMIETGAMLIELVSFFIFICTVMCFHQASLDDDW
Sbjct:    7 VLAGLAFMFSSSILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWMDAAKFLTGASSMGSIAIPIILRHAHMIETGAMLIELVSFFIFICTVMCFHQASLDDDW 126
[Close]
BLAST of evm.Ca_v2.0_07828 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D4XVD8|A0A9D4XVD8_PEA (Vacuolar protein sorting-associated protein 55 homolog OS=Pisum sativum OX=3888 GN=KIW84_031280 PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.476e-79
Identity = 117/120 (97.50%), Postives = 119/120 (99.17%), Query Frame = 0 
Query:    7 VLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWMDAAKFLTGASAMGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVMCFHQASLDDDW 126
            VLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGST F+MSR+GGGWMDAAKFLTGASAMGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVMCFHQASLDDDW
Sbjct:    7 VLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTHFMMSREGGGWMDAAKFLTGASAMGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVMCFHQASLDDDW 126
[Close]
BLAST of evm.Ca_v2.0_07828 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8L5S3|A0A8B8L5S3_ABRPR (Vacuolar protein sorting-associated protein 55 homolog isoform X1 OS=Abrus precatorius OX=3816 GN=LOC113862646 PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 7.181e-79
Identity = 115/124 (92.74%), Postives = 121/124 (97.58%), Query Frame = 0 
Query:    3 NVFTVLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWMDAAKFLTGASAMGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVMCFHQASLDDDW 126
             +  +LAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGW+DAAKFLTGASA+GSIAIPIIL+HAHMIETGAMLIELVSFFIFICTVMCFHQA+LDDDW
Sbjct:    4 TIHGILAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWIDAAKFLTGASAIGSIAIPIILRHAHMIETGAMLIELVSFFIFICTVMCFHQANLDDDW 127
[Close]
BLAST of evm.Ca_v2.0_07828 vs. ExPASy TrEMBL (2024)
Match: tr|C6SZQ4|C6SZQ4_SOYBN (Vacuolar protein sorting-associated protein 55 homolog OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 8.652e-79
Identity = 115/120 (95.83%), Postives = 120/120 (100.00%), Query Frame = 0 
Query:    7 VLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWMDAAKFLTGASAMGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVMCFHQASLDDDW 126
            VLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLM+RDGGGW+DAAKFLTGASA+GS+AIPIILKHAHMIETGAMLIELVSFFIFICTV+CFHQASLDDDW
Sbjct:    7 VLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMTRDGGGWIDAAKFLTGASAVGSLAIPIILKHAHMIETGAMLIELVSFFIFICTVLCFHQASLDDDW 126
[Close]
BLAST of evm.Ca_v2.0_07828 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6P4DLY4|A0A6P4DLY4_ARADU (Vacuolar protein sorting-associated protein 55 homolog isoform X1 OS=Arachis duranensis OX=130453 GN=LOC107494019 PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 1.077e-78
Identity = 117/126 (92.86%), Postives = 123/126 (97.62%), Query Frame = 0 
Query:    1 MFNVFTVLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWMDAAKFLTGASAMGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVMCFHQASLDDDW 126
            +F VF VLAGLAFMFSASILLQILACAIY+NWWPMLSALMYVLVPMPCLFFGGG+T FLMSRDGGGW+DAAKFLTGASA+GSIAIPIIL+HAHMIETGAMLIELVSFFIFICTVMCFHQASLDDDW
Sbjct:   26 LFLVFPVLAGLAFMFSASILLQILACAIYSNWWPMLSALMYVLVPMPCLFFGGGNTHFLMSRDGGGWIDAAKFLTGASAVGSIAIPIILRHAHMIETGAMLIELVSFFIFICTVMCFHQASLDDDW 151
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BLAST of evm.Ca_v2.0_07828 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445CQP6|A0A445CQP6_ARAHY (Vacuolar protein sorting-associated protein OS=Arachis hypogaea OX=3818 GN=Ahy_A06g028275 PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 1.077e-78
Identity = 117/126 (92.86%), Postives = 123/126 (97.62%), Query Frame = 0 
Query:    1 MFNVFTVLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWMDAAKFLTGASAMGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVMCFHQASLDDDW 126
            +F VF VLAGLAFMFSASILLQILACAIY+NWWPMLSALMYVLVPMPCLFFGGG+T FLMSRDGGGW+DAAKFLTGASA+GSIAIPIIL+HAHMIETGAMLIELVSFFIFICTVMCFHQASLDDDW
Sbjct:   26 LFLVFPVLAGLAFMFSASILLQILACAIYSNWWPMLSALMYVLVPMPCLFFGGGNTHFLMSRDGGGWIDAAKFLTGASAVGSIAIPIILRHAHMIETGAMLIELVSFFIFICTVMCFHQASLDDDW 151
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BLAST of evm.Ca_v2.0_07828 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D4XRH3|A0A9D4XRH3_PEA (Vacuolar protein sorting-associated protein 55 homolog OS=Pisum sativum OX=3888 GN=KIW84_031280 PE=3 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 1.689e-78
Identity = 116/119 (97.48%), Postives = 118/119 (99.16%), Query Frame = 0 
Query:    8 LAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWMDAAKFLTGASAMGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVMCFHQASLDDDW 126
            LAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGST F+MSR+GGGWMDAAKFLTGASAMGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVMCFHQASLDDDW
Sbjct:    4 LAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTHFMMSREGGGWMDAAKFLTGASAMGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVMCFHQASLDDDW 122
[Close]
BLAST of evm.Ca_v2.0_07828 vs. ExPASy TrEMBL (2024)
Match: tr|I3SFY0|I3SFY0_LOTJA (Vacuolar protein sorting-associated protein 55 homolog OS=Lotus japonicus OX=34305 PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 2.925e-78
Identity = 114/120 (95.00%), Postives = 119/120 (99.17%), Query Frame = 0 
Query:    7 VLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWMDAAKFLTGASAMGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVMCFHQASLDDDW 126
            VLAGLAFMFSASILLQILACA+YNNWWPMLSALMYVLVPMPCLFFGGGSTQFL+SRDGGGWMDAAKF+TGASAMGSIAIPIIL+HA MIETGAMLIELVSFFIF+CTVMCFHQASLDDDW
Sbjct:    7 VLAGLAFMFSASILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWMDAAKFMTGASAMGSIAIPIILRHAQMIETGAMLIELVSFFIFVCTVMCFHQASLDDDW 126
The following BLAST results are available for this feature:
BLAST of evm.Ca_v2.0_07828 vs. Araport11
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs arabidopsis Araport11)
Total hits: 8
Match NameE-valueIdentityDescription
|4.459e-7287.61Symbols: no symbol available | no full name availa... [more]
|4.459e-7287.61Symbols: no symbol available | no full name availa... [more]
|1.089e-5686.96Symbols: no symbol available | no full name availa... [more]
|1.371e-3853.85Symbols: no symbol available | no full name availa... [more]
|1.371e-3853.85Symbols: no symbol available | no full name availa... [more]
|1.371e-3853.85Symbols: no symbol available | no full name availa... [more]
|1.371e-3853.85Symbols: no symbol available | no full name availa... [more]
|1.371e-3853.85Symbols: no symbol available | no full name availa... [more]
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BLAST of evm.Ca_v2.0_07828 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt Swissprot )
Total hits: 4
Match NameE-valueIdentityDescription
sp|Q9AST6|VSP55_ARATH1.317e-3753.85Vacuolar protein sorting-associated protein 55 hom... [more]
sp|P47111|VPS55_YEAST1.737e-1032.26Vacuolar protein sorting-associated protein 55 OS=... [more]
sp|Q9UUH1|VPS55_SCHPO5.741e-1030.09Vacuolar protein sorting-associated protein 55 OS=... [more]
sp|Q54VP1|VPS55_DICDI3.265e-727.27Vacuolar protein sorting-associated protein 55 hom... [more]
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BLAST of evm.Ca_v2.0_07828 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A0S3RZD2|A0A0S3RZD2_PHAAN1.421e-8095.93Vacuolar protein sorting-associated protein 55 hom... [more]
tr|A0A8T0L230|A0A8T0L230_PHAAN1.421e-8095.93Vacuolar protein OS=Phaseolus angularis OX=3914 GN... [more]
tr|B7FF98|B7FF98_MEDTR2.219e-7996.67Vacuolar protein sorting 55 protein OS=Medicago tr... [more]
tr|A0A9D4XVD8|A0A9D4XVD8_PEA2.476e-7997.50Vacuolar protein sorting-associated protein 55 hom... [more]
tr|A0A8B8L5S3|A0A8B8L5S3_ABRPR7.181e-7992.74Vacuolar protein sorting-associated protein 55 hom... [more]
tr|C6SZQ4|C6SZQ4_SOYBN8.652e-7995.83Vacuolar protein sorting-associated protein 55 hom... [more]
tr|A0A6P4DLY4|A0A6P4DLY4_ARADU1.077e-7892.86Vacuolar protein sorting-associated protein 55 hom... [more]
tr|A0A445CQP6|A0A445CQP6_ARAHY1.077e-7892.86Vacuolar protein sorting-associated protein OS=Ara... [more]
tr|A0A9D4XRH3|A0A9D4XRH3_PEA1.689e-7897.48Vacuolar protein sorting-associated protein 55 hom... [more]
tr|I3SFY0|I3SFY0_LOTJA2.925e-7895.00Vacuolar protein sorting-associated protein 55 hom... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum cv. CDC Frontier genome v2.0
Date Performed: 2024-07-26
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007262Vps55/LEPROTPFAMPF04133Vps55coord: 9..120
e-value: 1.7E-29
score: 113.5
IPR007262Vps55/LEPROTPANTHERPTHR12050LEPTIN RECEPTOR-RELATEDcoord: 8..125

Sequences
The following sequences are available for this feature:

mRNA sequence

>drCicArie.Frontier.2.0.Ca_v2.0_07828.2 ID=drCicArie.Frontier.2.0.Ca_v2.0_07828.2; Name=evm.Ca_v2.0_07828; organism=Cicer arietinum; type=mRNA; length=381bp
ATGTTCAATGTCTTTACAGTCCTTGCTGGGCTAGCTTTTATGTTTTCGGC
TAGCATTTTGCTACAGATTCTGGCATGTGCCATATACAACAATTGGTGGC
CCATGCTATCAGCTCTGATGTATGTGCTGGTACCCATGCCTTGCTTATTC
TTTGGAGGTGGGTCCACTCAATTTCTGATGAGCCGTGATGGTGGGGGTTG
GATGGATGCTGCTAAGTTTTTGACTGGAGCATCAGCTATGGGGAGCATAG
CCATTCCTATAATCCTTAAGCATGCTCACATGATTGAGACTGGAGCAATG
CTCATTGAGCTTGTATCATTCTTTATATTTATATGTACTGTTATGTGTTT
TCACCAAGCGAGCCTTGACGATGATTGGTAA
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protein sequence of drCicArie.Frontier.2.0.Ca_v2.0_07828.2

>drCicArie.Frontier.2.0.Ca_v2.0_07828.2 ID=drCicArie.Frontier.2.0.Ca_v2.0_07828.2; Name=drCicArie.Frontier.2.0.Ca_v2.0_07828.2; organism=Cicer arietinum; type=polypeptide; length=126bp
MFNVFTVLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLF
FGGGSTQFLMSRDGGGWMDAAKFLTGASAMGSIAIPIILKHAHMIETGAM
LIELVSFFIFICTVMCFHQASLDDDW
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mRNA from alignment at Ca3_v2.0:72117072..72120936-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drCicArie.Frontier.2.0.Ca_v2.0_07828.2 ID=drCicArie.Frontier.2.0.Ca_v2.0_07828.2; Name=evm.Ca_v2.0_07828; organism=Cicer arietinum; type=mRNA; length=3865bp; location=Sequence derived from: Ca3_v2.0:72117072..72120936- (Cicer arietinum
CTTTCTATTTCAATTTTGTTCTACTCAAACCGTTAATTATTCTTTTTTCC
GCGATCCTCTTTATTATTACTCCAATTAGGTCATAATCACTCTCACTCCC
ATCACCAATTGTTACAACTTCTTTCTCCTTAACAGAAAGATCAAGCTGAA
TCTCCCTCGTAATTGGCTTATGGTTGTAACAAATACCAATCCATAGGGTT
TTCTTCAAATTCTGGTAGGATATAGTAGGGTTTGTTAAGGTATTATTTAG
GCTATTTCCTGACTAGTACTGAACTTAAGATCAAAGAAATTTCGCCCAGA
ATCTAAAAGTTCCACAAATGCTTTTTCAATTGATTATGCTATTAATGTCA
AAGAGGTGGGAATACCTTTTATTACTTTTCCTCAATTATCGCGGCCCAGA
TTTAGATAAAAATCTCAATTAAGCACTTATAGCATAGTTCATATCCCATA
TGTGCTTATGTATGAGCTATTTCTATAATAAAAATAAAAAATAAAGTTGA
AGTGTATTCATGTAAATTATAGGTTGTTATTATAAACTATCGTGGAGAGC
TTATAAAAATATATGTTATAAGTTGTTTTGATAAGCTCTACTAAAGAATC
TCGCAAGTGCTTATTAATGATAGTAGATAAGCTCAAATAAATCAATTGAA
ACAGACCCTAAATTTAGAGACAAATTACTCATGATATTGTTTATTCTAAA
TCCATTTGTATTTATGGAAATTATACTGCTGGGACCATATTCACTCTGTA
CATTTTATACTAAGGATTTAAGTTGGCTCATCTTTTTCAATTAATCTTTT
AAACTTTTTCCTCAATGTATATATCTTTTTAATTATTTTACTGATTCTGT
GTCTTGTATCTGATGTTACAAATTGGTGTTCGTTCTGGGGATGTTCAATG
TCTTTACAGTGTAAGTTGAAAACTAAACTTTGAACACTGTATCATGATAG
TTTATCTAGCAAAGTAAAGCTAATTAACTTTTAATCTTTGTGTTTTGGAC
GTGTAGCCTTGCTGGGCTAGCTTTTATGTTTTCGGCTAGCATTTTGCTAC
AGATTCTGGTATGTTCTTGACGATGAGACTAATTTTTGCTGCTCCTAAAT
TCTTGAAATTAACTGAGTGATGTCTGTTTGCTGGCTTTTTTCTACTTCAC
GATTATGATGCCTCCATGTCATGTTTGACAATCTTTGAAGTGTTATCTTT
GTATATTTTTGGATTATGCTTTTTAATTTTGATTGCTTATAAAATGAATC
AAAACCCTGAAAATTAATCTACTAGGTGTCAGTCACAATATTTTGACCAC
CAAAACTGTTCAAATCCTTGTTGAAATCTTGGGTGAAACACCTACTTATT
ACAGCCATCAAGTGAAACAGTAAAATCATACCATCTTCATGGAAAAGATT
ATTGGTGAACCATAAATACAGGTTGTGTAACTCTGAAGGATCGGTGTCAA
AACTTTCTGAAAATTTCATAGTCTTATTACATTAAAACTTATGAAGCATG
GTTTTATTTTCAATCAAGTTTTGTTGTGTACTTAAAGATGTCAAAAAACT
AGTATTTAAATCCTATAACCCGTGTGAAAATTTTAGATGGGATAGAAAGG
AATGATTCATAAAAGAGAGGGCAGGAAGGGAAGGAGTGGGAAGTGGAGGG
AGCAATCTTTCCATTATTTATAATTTTATTTAGATGTTTGATGAGGCAGG
ATAAATAATTTTATCTAGATGTTTGAGCAATCTTTCATAAAAGGGTTGTA
ATTTTTAAATTTTATATAGAATGAAAAGGAAATGGGCAGGATAAATAATT
CAACCAAACCAGTGTTAGAAGAAGCAGCGCTCTATTGTGAGCATGTGAGA
CCATGGTTGCATATTAGTGCAAGTTTTTTAGATTCAACTCTTGCTGCTGA
TAAGTTCTCAATACTTCACGCCTTGTATTTTAGTGTAATCAAGTTTGTTA
GGAGGAGAAGAATGATACAACCTCAGCATTTTATTAAAAAGGATATGCCC
GAATTACAAAAATAGAATTGCAAAACTTCAAAAGTTTGCAAACCTCTCTG
TCAGAAGTCCCCAATTCACTCCCAAGTTATAAGTTAGTATCCCTCTCGTC
CTTTCCTAGTAGTTATGGGCAACATGTCTCATTTTGTCTAACTATCTCAA
CACAACTAACCTAACAAACTCTCTAACCACAGTCTCACTTACAGTCATTA
ACATACTGTTAACACTTACAAACATCTAACAATACTCACCCACTAAAATT
TCACCTTGTCCTCAAGGTGATATTTTGCCTCTTTCCCAGGCTGAACACCC
CCCCTCCCCTAATTTCAATTGAATTCCCATTCTATCCCCCTTTTTCCTCT
GCCTTACAACCACCTCCATTTGTGATTAAACTACAACATTCATCTATCAA
CCATTGTACAAGGAATACGGTCTGGTGGCCGTGGAGGCTTAGTCAATAAG
TGTAAGATCCATGATTTAGTCGCCAATGATGGTCCATCCATTTTCTTAGA
CAAATTAGGCTTTAATGGTGGAAGCTTGGCATGAAACACTTGGTCAACCG
GGGGCAGTTCCATTTTCCTTTCATTCCCATTCACTGCCCAATTGAGCAAT
CTCGCTTCCTCCTTTTCAAATTTCTCTTACAGAACAGCCATGGTCTATGC
ATTCAAATTTCAGAGAACCATCCCCTTGTACTCTGGATTTTAAACCTCCC
TTCTCTACCCTTGAGTTGGGGGTTTGAATATCCTAATTTTGATCAGAGAA
CAATCCTTCTTTCCCCAACTCAAATGATGACGATTCAGGTTCCCATTTCC
CATACCTACCCAAAATGGTTTGATCTAGTTTATTTTCCAGTTGAAAACTT
TTGGTCAGAGCCTTCACAATGGTCTATCAGGTTTCATTTGAATTATTACA
ATCCCAACATTGGTTCTGAATGAGAGCACAACTTCTTAATGCCTTCCAGC
CCTTTAGGTTCCTTCTCAACAGACTCCACCTTAACGCGATCTAGTTGAAA
TATTGAATATGGAATGCTATAGATGCACATATGACTCTTCTCTGATAGTT
TCAATAGTCATTTAGCTTCAAGTGTTAATTAAATATATTCCGTCTGCTTT
CTTTTTGATATGGCAGGCATGTGCCATATACAACAATTGGTGGCCCATGC
TATCAGGTGAGTTAGTCTTTTATGCTGGAACTGGAAGTCTTGTTTTTACT
TTTTACCTGTAAAATTTCTAATAGTCAGAACATTGCACCTGCAGCTCTGA
TGTATGTGCTGGTACCCATGCCTTGCTTATTCTTTGGAGGTGGGTCCACT
CAATTTCTGATGAGCCGTGATGGTGGGGGGTGAGCATCTCTTGCCTAAAG
TTCTCTAGTTTTTGATAAAATTATTTTTCATGTGTCTAGTTTTTGGGATA
TCTGTTTTTCACGTCTTTTTTTAAAAAAACGAGGCTATTCTGTTTTGTGC
AACTGGTTTAGACCTTTTAAATTCAGTATGAGTGCACAGACAACTATTTA
ATTCAACAGTAAATATAATATATGGTAATATGCTGCAGTTGGATGGATGC
TGCTAAGTTTTTGACTGGAGCATCAGCTATGGGGAGCATAGCCATTCCTA
TAATCCTTAAGCATGCTCACATGATTGAGACTGGAGCAATGCTCATTGAG
CTTGTATCATTCTTTATATTTATATGTACTGTTATGTGTTTTCACCAAGC
GAGCCTTGACGATGATTGGTAAAAACAAATTCCATAGATATGACCTTCTG
CTAGTCATTAGGGTTTGTTACCCTAAAAAAGAAAGTGTAGAGAAACTTAA
TACAGCCTTGGAAACAGAAGTGTATGATTGAACCTCTGTAAAGTTCTGCA
AGTAATTATTTTTTC
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Coding sequence (CDS) from alignment at Ca3_v2.0:72117072..72120936-

>drCicArie.Frontier.2.0.Ca_v2.0_07828.2 ID=drCicArie.Frontier.2.0.Ca_v2.0_07828.2; Name=evm.Ca_v2.0_07828; organism=Cicer arietinum; type=CDS; length=381bp; location=Sequence derived from: Ca3_v2.0:72117072..72120936- (Cicer arietinum
ATGTTCAATGTCTTTACAGTCCTTGCTGGGCTAGCTTTTATGTTTTCGGC
TAGCATTTTGCTACAGATTCTGGCATGTGCCATATACAACAATTGGTGGC
CCATGCTATCAGCTCTGATGTATGTGCTGGTACCCATGCCTTGCTTATTC
TTTGGAGGTGGGTCCACTCAATTTCTGATGAGCCGTGATGGTGGGGGTTG
GATGGATGCTGCTAAGTTTTTGACTGGAGCATCAGCTATGGGGAGCATAG
CCATTCCTATAATCCTTAAGCATGCTCACATGATTGAGACTGGAGCAATG
CTCATTGAGCTTGTATCATTCTTTATATTTATATGTACTGTTATGTGTTT
TCACCAAGCGAGCCTTGACGATGATTGGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR007262Vps55/LEPROT