evm.Ca_v2.0_02831

Transcript Overview
Nameevm.Ca_v2.0_02831
Unique NamedrCicArie.Frontier.2.0.Ca_v2.0_02831.1
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length489
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca1_v2.0chromosomeCa1_v2.0:53540379..53541662 +Cicer arietinum cv. CDC Frontier genome v2.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
carccaR010Cajanus cajan cv. Asha genome v2.0Cajanus cajan
carccaR018Cajanus cajan cv. Asha genome v2.0Cajanus cajan
carvumR004Vigna umbellata FF25 genome v1.0Vigna umbellata
carvumR026Vigna umbellata FF25 genome v1.0Vigna umbellata
carvumR091Vigna umbellata FF25 genome v1.0Vigna umbellata
carvvaR031Vicia villosa cv. AU Merit genome v1.0Vicia villosa
carvvaR068Vicia villosa cv. AU Merit genome v1.0Vicia villosa
carvasR014Vigna angularis cv. Shumari genome v1.a1Vigna angularis
carvstR006Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
carvasR080Vigna angularis cv. Shumari genome v1.a1Vigna angularis
carvasR096Vigna angularis cv. Shumari genome v1.a1Vigna angularis
carvstR081Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
carvstR085Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
carvstR102Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
carvunR008Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
carpvfR004Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
carvunR028Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
carvunR040Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
carpvfR038Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
carpvfR045Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
XM_058924511.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
evm.Ca_v2.0_02831drCicArie.Frontier.2.0.Ca_v2.0_02831Cicer arietinumgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.Ca_v2.0_02831.1.exon1drCicArie.Frontier.2.0.Ca_v2.0_02831.1.exon1Cicer arietinumexon
drCicArie.Frontier.2.0.Ca_v2.0_02831.1.exon2drCicArie.Frontier.2.0.Ca_v2.0_02831.1.exon2Cicer arietinumexon
drCicArie.Frontier.2.0.Ca_v2.0_02831.1.exon3drCicArie.Frontier.2.0.Ca_v2.0_02831.1.exon3Cicer arietinumexon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.Ca_v2.0_02831.1.utr5p1drCicArie.Frontier.2.0.Ca_v2.0_02831.1.utr5p1Cicer arietinumfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.cds.Ca_v2.0_02831.1drCicArie.Frontier.2.0.cds.Ca_v2.0_02831.1Cicer arietinumCDS
drCicArie.Frontier.2.0.cds.Ca_v2.0_02831.1drCicArie.Frontier.2.0.cds.Ca_v2.0_02831.1_2Cicer arietinumCDS
drCicArie.Frontier.2.0.cds.Ca_v2.0_02831.1drCicArie.Frontier.2.0.cds.Ca_v2.0_02831.1_3Cicer arietinumCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.Ca_v2.0_02831.1.utr3p1drCicArie.Frontier.2.0.Ca_v2.0_02831.1.utr3p1Cicer arietinumthree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.Ca_v2.0_02831.1drCicArie.Frontier.2.0.Ca_v2.0_02831.1Cicer arietinumpolypeptide
drCicArie.Frontier.2.0.Ca_v2.0_02831.1drCicArie.Frontier.2.0.Ca_v2.0_02831.1-proteinCicer arietinumpolypeptide


Homology
[Close]
BLAST of evm.Ca_v2.0_02831 vs. Araport11
Match: | (Symbols: ATS3B | Embryo-specific protein 3B | chr5:24984463-24985674 REVERSE LENGTH=190)

HSP 1 Score: 110.923 bits (276), Expect = 6.064e-31
Identity = 56/159 (35.22%), Postives = 92/159 (57.86%), Query Frame = 0 
Query:    1 MKLFTLILTFSIIVDLSQATPTLITQHTIQTNQSSTLNSIEREGDTCNYKITIKTSCYSPPSTTDQIDLLFADAHGTEVFVPRLDGRASGTFDQCTTSIFNIRGKACVDEICKVYVYRRGSNGWIPKTVTVNDYINPPLTIYLNVYIPNDGAGYGHNFC 159
            ++LF  +++F  I+  S     ++    +   +S  ++ I++ G+TC Y + I TSC S   T DQI + F D +G +++ PRLD  ++ TF+QC++  F I G  C  +IC VY+YR G +GWIP TV +  + +  +T   N Y+P +   YG N+C
Sbjct:    4 VRLFFTLISFVFIISTSVYESKVLDPPHVA--ESFNVSLIQKLGNTCAYTVIISTSCSSTRYTRDQISVAFGDGYGNQIYAPRLDDPSTKTFEQCSSDTFQINGP-CTYQICYVYLYRSGPDGWIPNTVKIYSHGSKAVTFPYNTYVP-ESVWYGFNYC 158
[Close]
BLAST of evm.Ca_v2.0_02831 vs. Araport11
Match: | (Symbols: ATS3 | seed gene 3 | chr5:2237610-2238488 FORWARD LENGTH=213)

HSP 1 Score: 99.7525 bits (247), Expect = 2.281e-26
Identity = 45/125 (36.00%), Postives = 72/125 (57.60%), Query Frame = 0 
Query:   37 LNSIEREGDTCNYKITIKTSCYSPPSTTDQIDLLFADAHGTEVFVPRLDG--RASGTFDQCTTSIFNIRGKACVDEICKVYVYRRGSNGWIPKTVTVNDYINPPLTIYLNVYIPNDGAGYGHNFC 159
            L+ I+ +  TC Y + + TSC SP ST DQI ++F DA G +V+ P+L G  R  G   +C+T+ F +RG+   D IC +Y+ R G +GW+P+++ +    +  +    +  +P     YGHN C
Sbjct:   24 LSIIQMQQGTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGGLVRGPGGLGKCSTNTFQVRGQCLNDPICSLYINRNGPDGWVPESIEIYSEGSKSVKFDFSKSVPQLNTWYGHNNC 148
[Close]
BLAST of evm.Ca_v2.0_02831 vs. Araport11
Match: | (Symbols: ATS3 | seed gene 3 | chr5:2237783-2238488 FORWARD LENGTH=185)

HSP 1 Score: 96.6709 bits (239), Expect = 1.562e-25
Identity = 43/116 (37.07%), Postives = 67/116 (57.76%), Query Frame = 0 
Query:   46 TCNYKITIKTSCYSPPSTTDQIDLLFADAHGTEVFVPRLDG--RASGTFDQCTTSIFNIRGKACVDEICKVYVYRRGSNGWIPKTVTVNDYINPPLTIYLNVYIPNDGAGYGHNFC 159
            TC Y + + TSC SP ST DQI ++F DA G +V+ P+L G  R  G   +C+T+ F +RG+   D IC +Y+ R G +GW+P+++ +    +  +    +  +P     YGHN C
Sbjct:    5 TCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGGLVRGPGGLGKCSTNTFQVRGQCLNDPICSLYINRNGPDGWVPESIEIYSEGSKSVKFDFSKSVPQLNTWYGHNNC 120
[Close]
BLAST of evm.Ca_v2.0_02831 vs. Araport11
Match: | (Symbols: ATS3A | Embryo-specific protein 3A | chr2:17295259-17296329 REVERSE LENGTH=179)

HSP 1 Score: 94.7449 bits (234), Expect = 8.284e-25
Identity = 46/117 (39.32%), Postives = 71/117 (60.68%), Query Frame = 0 
Query:   46 TCNYKITIKTSCYSPPSTTDQIDLLFADAHGTEVFVPRLDGRASGTFDQCTTSIFNIRGKACVDEICKVYVYRRGSNGWIPKTVTVNDYINPPLTIYLNVYIPNDGAGYGHNFCGKI 162
             C+Y + IKTSC S   T D+I + F D +G EV+V RLD  +S TF++C++  + I G  C+ ++C +Y+ R+GS+GW P+ V +       +T Y N+++PN    YG N C  I
Sbjct:   47 ACSYTVIIKTSCSSVSYTRDKISISFGDVYGNEVYVKRLDDPSSRTFEKCSSDTYKISG-PCMRDVCYLYLLRQGSDGWKPENVKIYGSSIRSVTFYYNLFLPN-SVWYGFNVCNGI 161
[Close]
BLAST of evm.Ca_v2.0_02831 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:24986521-24987477 REVERSE LENGTH=223)

HSP 1 Score: 92.8189 bits (229), Expect = 1.197e-23
Identity = 44/120 (36.67%), Postives = 72/120 (60.00%), Query Frame = 0 
Query:   42 REGDTCNYKITIKTSCYSPPSTTDQIDLLFADAHGTEVFVPRLDGRAS--GTFDQCTTSIFNIRGKACVDEICKVYVYRRGSNGWIPKTVTVNDYINPPLTIYLNVYIPNDGAGYGHNFC 159
             E ++C Y + + TSC+SP  + DQ+ +   DA   +V  PRLD   S  G F++C++  F ++GK C++ IC VY+YR G++GWIP+TV +    +  +    N  +P +   YG+N+C
Sbjct:   35 HEEESCPYTVIVTTSCFSPDWSRDQVTIALGDADDNQVVAPRLDKPLSGGGGFEKCSSDTFQVKGK-CLNTICSVYIYRSGTDGWIPETVEIYKEGSKSVKFDFNKNVP-ENIWYGNNYC 152
[Close]
BLAST of evm.Ca_v2.0_02831 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q6NPM5|ATS3B_ARATH (Embryo-specific protein ATS3B OS=Arabidopsis thaliana OX=3702 GN=ATS3B PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.846e-30
Identity = 56/159 (35.22%), Postives = 92/159 (57.86%), Query Frame = 0 
Query:    1 MKLFTLILTFSIIVDLSQATPTLITQHTIQTNQSSTLNSIEREGDTCNYKITIKTSCYSPPSTTDQIDLLFADAHGTEVFVPRLDGRASGTFDQCTTSIFNIRGKACVDEICKVYVYRRGSNGWIPKTVTVNDYINPPLTIYLNVYIPNDGAGYGHNFC 159
            ++LF  +++F  I+  S     ++    +   +S  ++ I++ G+TC Y + I TSC S   T DQI + F D +G +++ PRLD  ++ TF+QC++  F I G  C  +IC VY+YR G +GWIP TV +  + +  +T   N Y+P +   YG N+C
Sbjct:    4 VRLFFTLISFVFIISTSVYESKVLDPPHVA--ESFNVSLIQKLGNTCAYTVIISTSCSSTRYTRDQISVAFGDGYGNQIYAPRLDDPSTKTFEQCSSDTFQINGP-CTYQICYVYLYRSGPDGWIPNTVKIYSHGSKAVTFPYNTYVP-ESVWYGFNYC 158
[Close]
BLAST of evm.Ca_v2.0_02831 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9LYP6|ATS3_ARATH (Embryo-specific protein ATS3 OS=Arabidopsis thaliana OX=3702 GN=ATS3 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.206e-25
Identity = 45/125 (36.00%), Postives = 72/125 (57.60%), Query Frame = 0 
Query:   37 LNSIEREGDTCNYKITIKTSCYSPPSTTDQIDLLFADAHGTEVFVPRLDG--RASGTFDQCTTSIFNIRGKACVDEICKVYVYRRGSNGWIPKTVTVNDYINPPLTIYLNVYIPNDGAGYGHNFC 159
            L+ I+ +  TC Y + + TSC SP ST DQI ++F DA G +V+ P+L G  R  G   +C+T+ F +RG+   D IC +Y+ R G +GW+P+++ +    +  +    +  +P     YGHN C
Sbjct:   24 LSIIQMQQGTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGGLVRGPGGLGKCSTNTFQVRGQCLNDPICSLYINRNGPDGWVPESIEIYSEGSKSVKFDFSKSVPQLNTWYGHNNC 148
[Close]
BLAST of evm.Ca_v2.0_02831 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q681K2|ATS3A_ARATH (Embryo-specific protein ATS3A OS=Arabidopsis thaliana OX=3702 GN=ATS3A PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.999e-24
Identity = 46/117 (39.32%), Postives = 71/117 (60.68%), Query Frame = 0 
Query:   46 TCNYKITIKTSCYSPPSTTDQIDLLFADAHGTEVFVPRLDGRASGTFDQCTTSIFNIRGKACVDEICKVYVYRRGSNGWIPKTVTVNDYINPPLTIYLNVYIPNDGAGYGHNFCGKI 162
             C+Y + IKTSC S   T D+I + F D +G EV+V RLD  +S TF++C++  + I G  C+ ++C +Y+ R+GS+GW P+ V +       +T Y N+++PN    YG N C  I
Sbjct:   47 ACSYTVIIKTSCSSVSYTRDKISISFGDVYGNEVYVKRLDDPSSRTFEKCSSDTYKISG-PCMRDVCYLYLLRQGSDGWKPENVKIYGSSIRSVTFYYNLFLPN-SVWYGFNVCNGI 161
[Close]
BLAST of evm.Ca_v2.0_02831 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2XEW8|A0A1S2XEW8_CICAR (Embryo-specific protein ATS3B-like OS=Cicer arietinum OX=3827 GN=LOC101493249 PE=4 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 3.371e-116
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0 
Query:    1 MKLFTLILTFSIIVDLSQATPTLITQHTIQTNQSSTLNSIEREGDTCNYKITIKTSCYSPPSTTDQIDLLFADAHGTEVFVPRLDGRASGTFDQCTTSIFNIRGKACVDEICKVYVYRRGSNGWIPKTVTVNDYINPPLTIYLNVYIPNDGAGYGHNFCGKI 162
            MKLFTLILTFSIIVDLSQATPTLITQHTIQTNQSSTLNSIEREGDTCNYKITIKTSCYSPPSTTDQIDLLFADAHGTEVFVPRLDGRASGTFDQCTTSIFNIRGKACVDEICKVYVYRRGSNGWIPKTVTVNDYINPPLTIYLNVYIPNDGAGYGHNFCGKI
Sbjct:    1 MKLFTLILTFSIIVDLSQATPTLITQHTIQTNQSSTLNSIEREGDTCNYKITIKTSCYSPPSTTDQIDLLFADAHGTEVFVPRLDGRASGTFDQCTTSIFNIRGKACVDEICKVYVYRRGSNGWIPKTVTVNDYINPPLTIYLNVYIPNDGAGYGHNFCGKI 162
[Close]
BLAST of evm.Ca_v2.0_02831 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3E725|A0A1S3E725_CICAR (Embryo-specific protein ATS3B-like OS=Cicer arietinum OX=3827 GN=LOC105852129 PE=4 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 1.037e-91
Identity = 130/159 (81.76%), Postives = 141/159 (88.68%), Query Frame = 0 
Query:    1 MKLFTLILTFSIIVDLSQATPTLITQHTIQTNQSSTLNSIEREGDTCNYKITIKTSCYSPPSTTDQIDLLFADAHGTEVFVPRLDGRASGTFDQCTTSIFNIRGKACVDEICKVYVYRRGSNGWIPKTVTVNDYINPPLTIYLNVYIPNDGAGYGHNFC 159
            MK+FTLI TFSIIVDL QATPTLIT+HTIQTNQSSTLNS+E EG  CNYKITI+TSCYSPPSTTDQIDLLFADAHGTEV VPRLD  ASG FDQCTTSIFNI  K C+D+ICKV+VYRRGSNGWIPKT+TVNDY++PPL +YLN  IPNDG GYG N C
Sbjct:    1 MKVFTLIFTFSIIVDLLQATPTLITRHTIQTNQSSTLNSVEGEG--CNYKITIETSCYSPPSTTDQIDLLFADAHGTEVLVPRLDSIASGMFDQCTTSIFNITAKVCIDKICKVFVYRRGSNGWIPKTITVNDYMHPPLAVYLNASIPNDGLGYGRNLC 157
[Close]
BLAST of evm.Ca_v2.0_02831 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2XCK9|A0A1S2XCK9_CICAR (Embryo-specific protein ATS3B-like isoform X1 OS=Cicer arietinum OX=3827 GN=LOC101493564 PE=4 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.418e-59
Identity = 91/160 (56.88%), Postives = 115/160 (71.88%), Query Frame = 0 
Query:    1 MKLFTLILTFSIIVDLSQATPTLITQHTIQTNQSSTLNSIEREGDTCNYKITIKTSCYSPPSTTDQIDLLFADAHGTEVFVPRLDGRASGTFDQCTTSIFNIRGKACVDEICKVYVYRRGSNGWIPKTVTVNDYINPPLTIYLNVYIPNDGAGYGHNFCG 160
            MK  TLI TFSIIV  SQ TPT++T+   Q NQ S LN I  +  +CNY +TIKTSC SP +TTDQID++F DA G+EVF PRLD   SG F+QCTT  F I GK C+++ICK+Y+YRRGS+GW+P+ VT  DY+  P+  Y N  IP+DG GYG ++C 
Sbjct:    1 MKALTLIFTFSIIVVFSQVTPTMVTRDKPQINQPSMLNDINSQSSSCNYLVTIKTSCDSPLNTTDQIDIVFGDADGSEVFSPRLDEPDSGAFEQCTTVSFEIEGK-CLNKICKLYLYRRGSDGWLPELVTAYDYLALPVPFYYNTDIPDDGVGYGFDYCA 159
[Close]
BLAST of evm.Ca_v2.0_02831 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D5AJA8|A0A9D5AJA8_PEA (Embryo-specific 3 OS=Pisum sativum OX=3888 GN=KIW84_058284 PE=4 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 2.546e-56
Identity = 94/166 (56.63%), Postives = 116/166 (69.88%), Query Frame = 0 
Query:    1 MKLFTLILTFSIIVDLSQATPTLITQHTIQTNQSSTLNSIEREGDT-----CNYKITIKTSCYSPPSTTDQIDLLFADAHGTEVFVPRLDGRASGTFDQCTTSIFNIRGKACVDEICKVYVYRRGSNGWIPKTVTVNDYINPPLTIYLNVYIPNDGAGYGHNFCGK 161
            MK  TLILTF II   S ATPTLITQ   Q NQSS LN  +++ +T     CNY + IKTSC SP  T D+I LLF DAH ++V+VPRLD   SGTF+QCTT+   I G  C+ +ICK+Y++R G++GWIP+TVT  DY NPP+  Y NV IP D AGYG+N+C K
Sbjct:    1 MKTLTLILTFIIITTFSNATPTLITQFQPQMNQSSMLNHTQQQNETKHSGSCNYMVNIKTSCNSPSFTKDEISLLFGDAHDSQVYVPRLDDPDSGTFEQCTTNELEILG-PCIKKICKLYLFRNGTDGWIPETVTAYDYDNPPVKFYYNVDIPED-AGYGYNYCDK 164
[Close]
BLAST of evm.Ca_v2.0_02831 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D5ANU8|A0A9D5ANU8_PEA (Embryo-specific 3 OS=Pisum sativum OX=3888 GN=KIW84_058284 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.821e-55
Identity = 93/167 (55.69%), Postives = 116/167 (69.46%), Query Frame = 0 
Query:    1 MKLFTLILTFSIIVDLSQATPTLITQHTIQTNQSSTLNSIEREGD------TCNYKITIKTSCYSPPSTTDQIDLLFADAHGTEVFVPRLDGRASGTFDQCTTSIFNIRGKACVDEICKVYVYRRGSNGWIPKTVTVNDYINPPLTIYLNVYIPNDGAGYGHNFCGK 161
            MK  TLILTF II   S ATPTLITQ   Q NQSS LN  +++ +      +CNY + IKTSC SP  T D+I LLF DAH ++V+VPRLD   SGTF+QCTT+   I G  C+ +ICK+Y++R G++GWIP+TVT  DY NPP+  Y NV IP D AGYG+N+C K
Sbjct:    1 MKTLTLILTFIIITTFSNATPTLITQFQPQMNQSSMLNHTQQQQNETKHSGSCNYMVNIKTSCNSPSFTKDEISLLFGDAHDSQVYVPRLDDPDSGTFEQCTTNELEILG-PCIKKICKLYLFRNGTDGWIPETVTAYDYDNPPVKFYYNVDIPED-AGYGYNYCDK 165
[Close]
BLAST of evm.Ca_v2.0_02831 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2XCK4|A0A1S2XCK4_CICAR (Embryo-specific protein ATS3A-like isoform X1 OS=Cicer arietinum OX=3827 GN=LOC101491608 PE=4 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 5.052e-49
Identity = 82/163 (50.31%), Postives = 116/163 (71.17%), Query Frame = 0 
Query:    1 MKLFTLILTFSIIVDLSQATPTLITQHTIQTNQSSTLNSIEREG---DTCNYKITIKTSCYSPPSTTDQIDLLFAD-AHGTEVFVPRLDGRASGTFDQCTTSIFNIRGKACVDEICKVYVYRRGSNGWIPKTVTVNDYINPPLTIYLNVYIPNDGAGYGHNFC 159
            MK FTLILTFSIIV LS ATPTL+T+   Q NQSS L+ ++ +      CNY +TIKTSC+SP  T D+I +LF D  H   +  P+++   S  F++CTT+ F + G +C++++C++YV R GS+GW+P+ VTV+DY N P++IY + + P+DGAGYG NFC
Sbjct:   11 MKAFTLILTFSIIVILSHATPTLLTRFKPQMNQSSALDDVQPQNVAERNCNYMVTIKTSCHSPRRTNDKITVLFGDFKHFVPIRTPKMNSN-SKRFERCTTTKFKLLG-SCLNKLCRLYVIRSGSDGWMPEYVTVDDYKNTPISIYFSTFFPDDGAGYGLNFC 171
[Close]
BLAST of evm.Ca_v2.0_02831 vs. ExPASy TrEMBL (2024)
Match: tr|A0A3Q7XBN7|A0A3Q7XBN7_CICAR (Embryo-specific protein ATS3B-like isoform X2 OS=Cicer arietinum OX=3827 GN=LOC101493564 PE=4 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 3.004e-48
Identity = 75/138 (54.35%), Postives = 99/138 (71.74%), Query Frame = 0 
Query:   23 LITQHTIQTNQSSTLNSIEREGDTCNYKITIKTSCYSPPSTTDQIDLLFADAHGTEVFVPRLDGRASGTFDQCTTSIFNIRGKACVDEICKVYVYRRGSNGWIPKTVTVNDYINPPLTIYLNVYIPNDGAGYGHNFCG 160
            ++T+   Q NQ S LN I  +  +CNY +TIKTSC SP +TTDQID++F DA G+EVF PRLD   SG F+QCTT  F I GK C+++ICK+Y+YRRGS+GW+P+ VT  DY+  P+  Y N  IP+DG GYG ++C 
Sbjct:    1 MVTRDKPQINQPSMLNDINSQSSSCNYLVTIKTSCDSPLNTTDQIDIVFGDADGSEVFSPRLDEPDSGAFEQCTTVSFEIEGK-CLNKICKLYLYRRGSDGWLPELVTAYDYLALPVPFYYNTDIPDDGVGYGFDYCA 137
[Close]
BLAST of evm.Ca_v2.0_02831 vs. ExPASy TrEMBL (2024)
Match: tr|A0A976XIQ5|A0A976XIQ5_MEDTR (Nodule-specific PLAT/LH2 domain protein OS=Medicago truncatula f. tricycla OX=304102 GN=NPD5 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 8.185e-48
Identity = 85/171 (49.71%), Postives = 111/171 (64.91%), Query Frame = 0 
Query:    1 MKLFTLILTFSIIVDLSQATPTLITQHTIQTNQSSTL---------NSIEREGDTCNYKITIKTSCYSPPSTTDQIDLLFADAHGTEVFVPRLDGRASGTFDQCTTSIFNIRGKACVDEICKVYVYRRGSNGWIPKTVTVNDYINPPLTIYLNVYIPNDGAGYGHNFCGKI 162
            MK  +LIL FSII   S ATPTL+TQ   Q NQS  L         + + R   TCNYK+ I+TSC SP  TTD+I + F DAHG+EVF+PRLD   +G F+QCT   F+I G+ C+++ICK+Y++R GSNGWIP TVT  +Y  PP+  Y N Y+P +   YG N C ++
Sbjct:    1 MKALSLILIFSIITAFSHATPTLVTQP--QINQSPILYYAQENDNQDKMTRPTGTCNYKVIIETSCRSPQYTTDRISISFGDAHGSEVFIPRLDDPRAGRFEQCTMVSFDIVGQ-CLNDICKLYLHRVGSNGWIPTTVTAYNYGYPPVKFYYNTYVP-ENVDYGFNHCNEV 167
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BLAST of evm.Ca_v2.0_02831 vs. ExPASy TrEMBL (2024)
Match: tr|Q2HVW6|Q2HVW6_MEDTR (Embryo-specific 3 OS=Medicago truncatula OX=3880 GN=11433578 PE=4 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 8.185e-48
Identity = 85/171 (49.71%), Postives = 111/171 (64.91%), Query Frame = 0 
Query:    1 MKLFTLILTFSIIVDLSQATPTLITQHTIQTNQSSTL---------NSIEREGDTCNYKITIKTSCYSPPSTTDQIDLLFADAHGTEVFVPRLDGRASGTFDQCTTSIFNIRGKACVDEICKVYVYRRGSNGWIPKTVTVNDYINPPLTIYLNVYIPNDGAGYGHNFCGKI 162
            MK  +LIL FSII   S ATPTL+TQ   Q NQS  L         + + R   TCNYK+ I+TSC SP  TTD+I + F DAHG+EVF+PRLD   +G F+QCT   F+I G+ C+++ICK+Y++R GSNGWIP TVT  +Y  PP+  Y N Y+P +   YG N C ++
Sbjct:    1 MKALSLILIFSIITAFSHATPTLVTQP--QINQSPILYYAQENDNQDKMTRPTGTCNYKVIIETSCRSPQYTTDRISISFGDAHGSEVFIPRLDDPRAGRFEQCTMVSFDIVGQ-CLNDICKLYLHRVGSNGWIPTTVTAYNYGYPPVKFYYNTYVP-ENVDYGFNHCNEV 167
[Close]
BLAST of evm.Ca_v2.0_02831 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1Q1N9P9|A0A1Q1N9P9_MEDTR (Nodule-specific PLAT domain protein OS=Medicago truncatula OX=3880 GN=NPD1 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.936e-45
Identity = 90/167 (53.89%), Postives = 114/167 (68.26%), Query Frame = 0 
Query:    3 LFTLILTFSII-VDLSQATPTLITQHTIQTNQSSTL------NSIEREGDTCNYKITIKTSCYSPPSTTDQIDLLFADAHGTEV-FVPRLDGRASGT-FDQCTTSIFNIRGKACVDEICKVYVYRRGSNGWIPKTVTVNDYINPPLTIYLNVYIPNDGAGYGHNFCG 160
            L TLI TFSII V  + ATPTLI +   Q NQSS L      N  +R G+ C+YK+TI TSC SP ST D+I +LF DA G+EV +VPRLD   SGT F+QCTT  F I G  C+ +ICK+Y++R G++GWIP+TVT + + NPP+T   N+ IP D +GYG N CG
Sbjct:    4 LLTLIFTFSIIIVAFTHATPTLIIRTQPQMNQSSMLIHTQQQNETKRSGN-CDYKVTITTSCKSPLSTKDEISILFGDADGSEVVYVPRLDDPDSGTTFEQCTTMDFEILG-PCIGKICKMYLFRNGTDGWIPETVTASHHDNPPVTFKYNIDIPKD-SGYGFNNCG 167
The following BLAST results are available for this feature:
BLAST of evm.Ca_v2.0_02831 vs. Araport11
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs arabidopsis Araport11)
Total hits: 5
Match NameE-valueIdentityDescription
|6.064e-3135.22Symbols: ATS3B | Embryo-specific protein 3B | chr5... [more]
|2.281e-2636.00Symbols: ATS3 | seed gene 3 | chr5:2237610-2238488... [more]
|1.562e-2537.07Symbols: ATS3 | seed gene 3 | chr5:2237783-2238488... [more]
|8.284e-2539.32Symbols: ATS3A | Embryo-specific protein 3A | chr2... [more]
|1.197e-2336.67Symbols: no symbol available | no full name availa... [more]
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BLAST of evm.Ca_v2.0_02831 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt Swissprot )
Total hits: 3
Match NameE-valueIdentityDescription
sp|Q6NPM5|ATS3B_ARATH5.846e-3035.22Embryo-specific protein ATS3B OS=Arabidopsis thali... [more]
sp|Q9LYP6|ATS3_ARATH2.206e-2536.00Embryo-specific protein ATS3 OS=Arabidopsis thalia... [more]
sp|Q681K2|ATS3A_ARATH7.999e-2439.32Embryo-specific protein ATS3A OS=Arabidopsis thali... [more]
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BLAST of evm.Ca_v2.0_02831 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2XEW8|A0A1S2XEW8_CICAR3.371e-116100.00Embryo-specific protein ATS3B-like OS=Cicer arieti... [more]
tr|A0A1S3E725|A0A1S3E725_CICAR1.037e-9181.76Embryo-specific protein ATS3B-like OS=Cicer arieti... [more]
tr|A0A1S2XCK9|A0A1S2XCK9_CICAR3.418e-5956.88Embryo-specific protein ATS3B-like isoform X1 OS=C... [more]
tr|A0A9D5AJA8|A0A9D5AJA8_PEA2.546e-5656.63Embryo-specific 3 OS=Pisum sativum OX=3888 GN=KIW8... [more]
tr|A0A9D5ANU8|A0A9D5ANU8_PEA1.821e-5555.69Embryo-specific 3 OS=Pisum sativum OX=3888 GN=KIW8... [more]
tr|A0A1S2XCK4|A0A1S2XCK4_CICAR5.052e-4950.31Embryo-specific protein ATS3A-like isoform X1 OS=C... [more]
tr|A0A3Q7XBN7|A0A3Q7XBN7_CICAR3.004e-4854.35Embryo-specific protein ATS3B-like isoform X2 OS=C... [more]
tr|A0A976XIQ5|A0A976XIQ5_MEDTR8.185e-4849.71Nodule-specific PLAT/LH2 domain protein OS=Medicag... [more]
tr|Q2HVW6|Q2HVW6_MEDTR8.185e-4849.71Embryo-specific 3 OS=Medicago truncatula OX=3880 G... [more]
tr|A0A1Q1N9P9|A0A1Q1N9P9_MEDTR2.936e-4553.89Nodule-specific PLAT domain protein OS=Medicago tr... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum cv. CDC Frontier genome v2.0
Date Performed: 2024-07-26
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010417Embryo-specific ATS3PFAMPF06232ATS3coord: 40..159
e-value: 3.4E-28
score: 109.4
NoneNo IPR availableGENE3D2.60.60.20PLAT/LH2 domaincoord: 27..150
e-value: 9.9E-6
score: 27.3
NoneNo IPR availablePANTHERPTHR31718PLAT DOMAIN-CONTAINING PROTEINcoord: 3..160
IPR036392PLAT/LH2 domain superfamilySUPERFAMILY49723Lipase/lipooxygenase domain (PLAT/LH2 domain)coord: 44..148

Sequences
The following sequences are available for this feature:

mRNA sequence

>drCicArie.Frontier.2.0.Ca_v2.0_02831.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_02831.1; Name=evm.Ca_v2.0_02831; organism=Cicer arietinum; type=mRNA; length=489bp
ATGAAACTTTTTACTTTAATCCTCACATTCTCCATAATTGTTGATTTATC
GCAAGCAACACCAACTTTGATCACTCAACATACAATTCAAACCAACCAAT
CTTCCACGCTTAACAGTATCGAGCGAGAAGGTGATACATGCAATTACAAG
ATCACCATAAAAACAAGTTGCTATTCTCCACCATCTACAACCGATCAAAT
CGATTTGTTATTTGCAGACGCTCATGGCACTGAGGTTTTTGTTCCAAGAT
TGGATGGTCGTGCTTCTGGGACGTTCGATCAATGCACGACAAGTATATTT
AACATAAGAGGAAAAGCTTGTGTCGATGAAATCTGCAAAGTGTATGTATA
TAGACGTGGATCAAATGGTTGGATACCAAAGACTGTTACTGTAAATGACT
ATATTAACCCTCCTCTCACAATTTACCTCAACGTTTATATTCCTAATGAT
GGTGCTGGCTATGGCCACAACTTTTGTGGAAAAATTTAG
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protein sequence of drCicArie.Frontier.2.0.Ca_v2.0_02831.1

>drCicArie.Frontier.2.0.Ca_v2.0_02831.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_02831.1; Name=drCicArie.Frontier.2.0.Ca_v2.0_02831.1; organism=Cicer arietinum; type=polypeptide; length=162bp
MKLFTLILTFSIIVDLSQATPTLITQHTIQTNQSSTLNSIEREGDTCNYK
ITIKTSCYSPPSTTDQIDLLFADAHGTEVFVPRLDGRASGTFDQCTTSIF
NIRGKACVDEICKVYVYRRGSNGWIPKTVTVNDYINPPLTIYLNVYIPND
GAGYGHNFCGKI
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mRNA from alignment at Ca1_v2.0:53540379..53541662+

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drCicArie.Frontier.2.0.Ca_v2.0_02831.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_02831.1; Name=evm.Ca_v2.0_02831; organism=Cicer arietinum; type=mRNA; length=1284bp; location=Sequence derived from: Ca1_v2.0:53540379..53541662+ (Cicer arietinum
TAACCAACAAATATAAATATTATAATAAAATATTAGAAAAGAGTATAGTG
TACATATTGTTAGCATTTGATGGTGTAGTTAAATATTGCCCCCAACTTTA
AAATGTCCAACAATATCTAAAATGAATTAAGTGTTTCTCCTTCTCTTTTC
TTGAAAGCAATTAAAAAGAGGTTATTTACAAAATCATGAAACTTTTTACT
TTAATCCTCACATTCTCCATAATTGTTGATTTATCGCAAGCAACACCAAC
TTTGATCACTCAACATACAATTCAAACCAACCAATCTTCCACGCTTAACA
GTATCGAGCGAGAAGTAATTAAATTTCATAGACTCTTCTCTTTATTAATA
ATAACATATATAATAGCTTTTTAATTTATATTTTTTTGCACTATATACAT
GTTTTAGGGTGATACATGCAATTACAAGATCACCATAAAAACAAGTTGCT
ATTCTCCACCATCTACAACCGATCAAATCGATTTGTTATTTGCAGACGCT
CATGGCACTGAGGTACTACCTATAATATACATGTTTCTCTTCCTCTTAAT
TAAAATTTTGATAACAAAATTGGAGAAAGTAaaataaatattatattgaa
ttaaacaaattattagtataattaattaattacctagtgcacataacttg
tattattaactaactaattaatGTGTCTAATATTTGTCTCAAGTTAGAAT
ATTGTGTTGACTATAGTTTGATTTTAAAAAAAAATAAAAAATAATTATGT
TTCTAATAATAATATTTAATTAATTGAAGGTTTTTGTTCCAAGATTGGAT
GGTCGTGCTTCTGGGACGTTCGATCAATGCACGACAAGTATATTTAACAT
AAGAGGAAAAGCTTGTGTCGATGAAATCTGCAAAGTGTATGTATATAGAC
GTGGATCAAATGGTTGGATACCAAAGACTGTTACTGTAAATGACTATATT
AACCCTCCTCTCACAATTTACCTCAACGTTTATATTCCTAATGATGGTGC
TGGCTATGGCCACAACTTTTGTGGAAAAATTTAGTTTTCATATTAGGACT
ATTTCTTTGTTTTCTTTAATAAAGATAAGCTTATTGTGTTTCATAAAGAA
TTATATGTATGGAGGTTAGTCTTGAAATAAGCTTGCTTCTAATAAGTGTT
TTATGCACTACTTAAGTAAGAAATATTTAATGATAAAAGATGAATGATTA
AGTTGGGATGTTTCTAGTTGTATTCtatatatatatatatatataAACTT
CTCAAGTATTAATAATAGTATTCAATATTTCTTT
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Coding sequence (CDS) from alignment at Ca1_v2.0:53540379..53541662+

>drCicArie.Frontier.2.0.Ca_v2.0_02831.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_02831.1; Name=evm.Ca_v2.0_02831; organism=Cicer arietinum; type=CDS; length=489bp; location=Sequence derived from: Ca1_v2.0:53540379..53541662+ (Cicer arietinum
ATGAAACTTTTTACTTTAATCCTCACATTCTCCATAATTGTTGATTTATC
GCAAGCAACACCAACTTTGATCACTCAACATACAATTCAAACCAACCAAT
CTTCCACGCTTAACAGTATCGAGCGAGAAGGTGATACATGCAATTACAAG
ATCACCATAAAAACAAGTTGCTATTCTCCACCATCTACAACCGATCAAAT
CGATTTGTTATTTGCAGACGCTCATGGCACTGAGGTTTTTGTTCCAAGAT
TGGATGGTCGTGCTTCTGGGACGTTCGATCAATGCACGACAAGTATATTT
AACATAAGAGGAAAAGCTTGTGTCGATGAAATCTGCAAAGTGTATGTATA
TAGACGTGGATCAAATGGTTGGATACCAAAGACTGTTACTGTAAATGACT
ATATTAACCCTCCTCTCACAATTTACCTCAACGTTTATATTCCTAATGAT
GGTGCTGGCTATGGCCACAACTTTTGTGGAAAAATTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR010417Embryo-specific_ATS3
IPR036392PLAT/LH2_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding