evm.Ca_v2.0_02872
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of evm.Ca_v2.0_02872 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:5376356-5376972 REVERSE LENGTH=141) HSP 1 Score: 60.4622 bits (145), Expect = 2.704e-12 Identity = 34/80 (42.50%), Postives = 43/80 (53.75%), Query Frame = 0 Query: 44 TGWSNHCHSSVVPRALNPKTGDQNSTTSSQ----KEDLAYVAKLVVGSFGGAGAIKYGSAVFPETTTPNLVLALAIIFAP 119 T + N + S R+ D S + +EDL Y+ K+ VGS GA IKYGS +FP+ T PNL LAL II AP Sbjct: 42 TSFRNPSNCSGTKRSFRVMASDDRSEQADNGQGIQEDLNYLLKIGVGSVAGAAIIKYGSVLFPQITRPNLTLALFIIIAP 121
BLAST of evm.Ca_v2.0_02872 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2XB60|A0A1S2XB60_CICAR (Uncharacterized protein LOC101509442 OS=Cicer arietinum OX=3827 GN=LOC101509442 PE=4 SV=1) HSP 1 Score: 277.33 bits (708), Expect = 3.323e-94 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0 Query: 1 MAVWVSDIVGPGRSCNCKFSCHRRRINVNPPNTPLVSIIFPTTTGWSNHCHSSVVPRALNPKTGDQNSTTSSQKEDLAYVAKLVVGSFGGAGAIKYGSAVFPETTTPNLVLALAIIFAPVLVAVLLLVNESLRPKP 136 MAVWVSDIVGPGRSCNCKFSCHRRRINVNPPNTPLVSIIFPTTTGWSNHCHSSVVPRALNPKTGDQNSTTSSQKEDLAYVAKLVVGSFGGAGAIKYGSAVFPETTTPNLVLALAIIFAPVLVAVLLLVNESLRPKP Sbjct: 1 MAVWVSDIVGPGRSCNCKFSCHRRRINVNPPNTPLVSIIFPTTTGWSNHCHSSVVPRALNPKTGDQNSTTSSQKEDLAYVAKLVVGSFGGAGAIKYGSAVFPETTTPNLVLALAIIFAPVLVAVLLLVNESLRPKP 136
BLAST of evm.Ca_v2.0_02872 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D4X3P4|A0A9D4X3P4_PEA (Uncharacterized protein OS=Pisum sativum OX=3888 GN=KIW84_058334 PE=4 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 3.027e-49 Identity = 88/136 (64.71%), Postives = 103/136 (75.74%), Query Frame = 0 Query: 1 MAVWVSDIVGPGRSCN-CKFSCHRRRINVNPPNTPLVSIIFPTTTGWSNHCHSSVVPRALNPKTGDQNSTTSSQKEDLAYVAKLVVGSFGGAGAIKYGSAVFPETTTPNLVLALAIIFAPVLVAVLLLVNESLRPK 135 MA VS+IVG G + N CKFSC RR++NV +P S++FP TT SSVVPRAL+PK G+QNSTTSS +EDL YVAKLV+GSF GAG IKYG+ VFPE TTPNLVLAL II PV+VAV LL+N+SLR K Sbjct: 1 MATSVSEIVGLGSTYNNCKFSCFRRKVNV--VTSPNASLLFPATTTTR---LSSVVPRALDPKNGEQNSTTSSFQEDLVYVAKLVMGSFAGAGVIKYGTGVFPEITTPNLVLALVIISTPVIVAVFLLINQSLRQK 131
BLAST of evm.Ca_v2.0_02872 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2Z6MS11|A0A2Z6MS11_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_113920 PE=4 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 3.694e-45 Identity = 93/138 (67.39%), Postives = 100/138 (72.46%), Query Frame = 0 Query: 1 MAVWVSDIVGPGR-SCNCKFSCHRRRINVNPPNTPLVSIIFPTTTGWSNHCHSSVVPRALNPKTGDQNSTTSS-QKEDLAYVAKLVVGSFGGAGAIKYGSAVFPETTTPNLVLALAIIFAPVLVAVLLLVNESLRPKP 136 MAV VSDIVG R S NC S ++NVNPPN LV +FPTTT SSVV RA QNSTTSS QKEDL YVAKLVV SFGGA AIKYGSA+FPE TTPNLVLAL II +PVLVAV LL+N+SLRPKP Sbjct: 1 MAVSVSDIVGLRRTSKNCLLSRFSWKVNVNPPNKALVYTLFPTTTKIKKL--SSVV-RA-------QNSTTSSSQKEDLVYVAKLVVASFGGAAAIKYGSAIFPEITTPNLVLALVIISSPVLVAVFLLINQSLRPKP 128
BLAST of evm.Ca_v2.0_02872 vs. ExPASy TrEMBL (2024)
Match: tr|G7II86|G7II86_MEDTR (Transmembrane protein, putative OS=Medicago truncatula OX=3880 GN=11432530 PE=4 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 8.317e-45 Identity = 88/135 (65.19%), Postives = 98/135 (72.59%), Query Frame = 0 Query: 1 MAVWVSDIVGPGRSCN-CKFSCHRRRINVNPPNTPLVS-IIFPTTTGWSNHCHSSVVPRALNPKTGDQNSTTSSQKEDLAYVAKLVVGSFGGAGAIKYGSAVFPETTTPNLVLALAIIFAPVLVAVLLLVNESLR 133 MAV VS+IVG G + C S RRR+NV PNT L+S IIFPT WS SVV RA N +ST SSQKED+ Y+AKLVVGSFGGAG IKYGSA+FPE TTPNLVLAL II PVLVAVLLL+N+SLR Sbjct: 1 MAVSVSEIVGLGSTYGYCNLSRFRRRVNVTSPNTTLISSIIFPTRRKWS-----SVVVRAQN------SSTYSSQKEDIVYLAKLVVGSFGGAGVIKYGSAIFPEITTPNLVLALVIISTPVLVAVLLLINQSLR 124
BLAST of evm.Ca_v2.0_02872 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2K3NCP3|A0A2K3NCP3_TRIPR (Uncharacterized protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g024099 PE=4 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.531e-42 Identity = 89/140 (63.57%), Postives = 99/140 (70.71%), Query Frame = 0 Query: 1 MAVWVSDIVGPGR-SCNCKFSCHRRRINVNPPNTPLVSIIFPTTT--GWSNHCHSSVVPRALNPKTGDQNSTTSS-QKEDLAYVAKLVVGSFGGAGAIKYGSAVFPETTTPNLVLALAIIFAPVLVAVLLLVNESLRPKP 136 MAV VS+IVG GR S NC S ++NVNPPN LV +FPTTT WS+ V RA QNSTTSS QKED YV+KLVVGSF GA AIKYGSA+FPE TTPNLVLAL II PVLVAVLLL+N+S RP+P Sbjct: 3 MAVSVSEIVGLGRTSKNCLLSRFSWKVNVNPPNKALVYTLFPTTTIRKWSS------VVRA-------QNSTTSSSQKEDSVYVSKLVVGSFAGAAAIKYGSAIFPEITTPNLVLALVIISTPVLVAVLLLINQSRRPEP 129
BLAST of evm.Ca_v2.0_02872 vs. ExPASy TrEMBL (2024)
Match: tr|I3SIF0|I3SIF0_LOTJA (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.244e-39 Identity = 78/121 (64.46%), Postives = 89/121 (73.55%), Query Frame = 0 Query: 18 KFSCHRRRINVNPPNTPL-----VSIIFPTTT-GWSNHCHSSVVPRALNPKTGDQNSTTSSQKEDLAYVAKLVVGSFGGAGAIKYGSAVFPETTTPNLVLALAIIFAPVLVAVLLLVNESL 132 +F CHRR NPPN+PL + I F TTT WS V+PRA +PKTG+QNST +SQ EDL YVAKL GSF GAGA+KYGSAVFPE TTPNLVLAL+II PV+VAVLLL+ ESL Sbjct: 11 RFLCHRRE---NPPNSPLFLQSPMPIRFSTTTTSWS-----CVIPRARDPKTGEQNSTNTSQVEDLVYVAKLAAGSFVGAGAVKYGSAVFPEITTPNLVLALSIILTPVVVAVLLLIKESL 123
BLAST of evm.Ca_v2.0_02872 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8KDE0|A0A8B8KDE0_ABRPR (Uncharacterized protein LOC113854331 OS=Abrus precatorius OX=3816 GN=LOC113854331 PE=4 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.755e-37 Identity = 84/139 (60.43%), Postives = 96/139 (69.06%), Query Frame = 0 Query: 1 MAVWVSDIVGPGRSCNCKFSCHRRRINVNPPNTPL-----VSIIFPTTTGWSNHCHSSVVPRALNPKTGDQNSTTSSQKEDLAYVAKLVVGSFGGAGAIKYGSAVFPETTTPNLVLALAIIFAPVLVAVLLLVNESLRP 134 M V VS+I S + +F R+R+N +P NTPL + I F TTT SS+VPRAL PK DQNS TS Q EDLAYV KLVVGSF GAGAIKYGSA+FPE TTPN+VLALAII PVLVAV LL+ ES +P Sbjct: 1 MGVSVSEI-----SWSWRFMHLRQRVNPSP-NTPLFLPNPMPICFATTT-----SSSSLVPRALGPKREDQNSITSPQ-EDLAYVGKLVVGSFVGAGAIKYGSAIFPEITTPNIVLALAIILTPVLVAVFLLIKESRKP 127
BLAST of evm.Ca_v2.0_02872 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445CIN7|A0A445CIN7_ARAHY (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A07g037401 PE=4 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 3.565e-33 Identity = 72/139 (51.80%), Postives = 89/139 (64.03%), Query Frame = 0 Query: 1 MAVWVSDIVGPGRSCNCKFSCHRRRINVNPPNTPL-------VSIIFPTTTGWSNHCHSSVVPRALNPKTGDQNSTTSSQKEDLAYVAKLVVGSFGGAGAIKYGSAVFPETTTPNLVLALAIIFAPVLVAVLLLVNESL 132 M V V+++VG G C+ C++ R +N P TPL V + T W++ S + PRA P+ GDQN TSSQ EDL YV KLV GS GA IKYGSA+FPE TTPN+VLAL II APVL+AV+LL+ ESL Sbjct: 1 MVVSVAEVVG-GWRLFCRSGCYQNRRKLNQPKTPLFLRNAMPVRFTLNSRTRWTS---SIIAPRAEGPQAGDQNPETSSQ-EDLWYVGKLVAGSVAGAAVIKYGSALFPEITTPNIVLALVIITAPVLLAVVLLIKESL 134
BLAST of evm.Ca_v2.0_02872 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SFC7|A0A0S3SFC7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G010000 PE=4 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 5.287e-33 Identity = 74/124 (59.68%), Postives = 84/124 (67.74%), Query Frame = 0 Query: 12 GRSCNCKFSCHRRRINVNPPNTPLVSIIFPTTTGWSNHCHSSVVPRALNPKTGDQNSTTSSQKEDLAYVAKLVVGSFGGAGAIKYGSAVFPETTTPNLVLALAIIFAPVLVAVLLLVNESLRPK 135 G + K C+ R V+ NTPL I PT G++ S VV RA NPKT DQ+ST+SSQ EDL YV KLV GSF G GAIKYGSA+FPE TTPNLVLAL II PVLVAV LL+ ESL + Sbjct: 5 GIGWSWKLLCNGR--GVSKTNTPLFLQI-PTQIGFTRF-SSRVVARASNPKTEDQSSTSSSQ-EDLVYVGKLVAGSFAGGGAIKYGSALFPEITTPNLVLALIIISTPVLVAVFLLIKESLTDQ 123
BLAST of evm.Ca_v2.0_02872 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9UPH1|A0A0L9UPH1_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0211790 PE=4 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 5.287e-33 Identity = 74/124 (59.68%), Postives = 84/124 (67.74%), Query Frame = 0 Query: 12 GRSCNCKFSCHRRRINVNPPNTPLVSIIFPTTTGWSNHCHSSVVPRALNPKTGDQNSTTSSQKEDLAYVAKLVVGSFGGAGAIKYGSAVFPETTTPNLVLALAIIFAPVLVAVLLLVNESLRPK 135 G + K C+ R V+ NTPL I PT G++ S VV RA NPKT DQ+ST+SSQ EDL YV KLV GSF G GAIKYGSA+FPE TTPNLVLAL II PVLVAV LL+ ESL + Sbjct: 5 GIGWSWKLLCNGR--GVSKTNTPLFLQI-PTQIGFTRF-SSRVVARASNPKTEDQSSTSSSQ-EDLVYVGKLVAGSFAGGGAIKYGSALFPEITTPNLVLALIIISTPVLVAVFLLIKESLTDQ 123 The following BLAST results are available for this feature:
BLAST of evm.Ca_v2.0_02872 vs. Araport11
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs arabidopsis Araport11) Total hits: 1 Position : 0 Zoom : x 1
BLAST of evm.Ca_v2.0_02872 vs. Araport11
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt Swissprot ) Total hits: 0 Position : 0 Zoom : x 1
BLAST of evm.Ca_v2.0_02872 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum cv. CDC Frontier genome v2.0
Date Performed: 2024-07-26 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >drCicArie.Frontier.2.0.Ca_v2.0_02872.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_02872.1; Name=evm.Ca_v2.0_02872; organism=Cicer arietinum; type=mRNA; length=411bpback to top protein sequence of drCicArie.Frontier.2.0.Ca_v2.0_02872.1 >drCicArie.Frontier.2.0.Ca_v2.0_02872.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_02872.1; Name=drCicArie.Frontier.2.0.Ca_v2.0_02872.1; organism=Cicer arietinum; type=polypeptide; length=136bpback to top mRNA from alignment at Ca1_v2.0:53837650..53838424- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>drCicArie.Frontier.2.0.Ca_v2.0_02872.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_02872.1; Name=evm.Ca_v2.0_02872; organism=Cicer arietinum; type=mRNA; length=775bp; location=Sequence derived from: Ca1_v2.0:53837650..53838424- (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca1_v2.0:53837650..53838424- >drCicArie.Frontier.2.0.Ca_v2.0_02872.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_02872.1; Name=evm.Ca_v2.0_02872; organism=Cicer arietinum; type=CDS; length=411bp; location=Sequence derived from: Ca1_v2.0:53837650..53838424- (Cicer arietinumback to top |