evm.Ca_v2.0_02872

Transcript Overview
Nameevm.Ca_v2.0_02872
Unique NamedrCicArie.Frontier.2.0.Ca_v2.0_02872.1
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length411
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca1_v2.0chromosomeCa1_v2.0:53837650..53838424 -Cicer arietinum cv. CDC Frontier genome v2.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
carccaR010Cajanus cajan cv. Asha genome v2.0Cajanus cajan
carccaR018Cajanus cajan cv. Asha genome v2.0Cajanus cajan
carccaR031Cajanus cajan cv. Asha genome v2.0Cajanus cajan
carvumR004Vigna umbellata FF25 genome v1.0Vigna umbellata
carvumR026Vigna umbellata FF25 genome v1.0Vigna umbellata
carvumR041Vigna umbellata FF25 genome v1.0Vigna umbellata
carvumR091Vigna umbellata FF25 genome v1.0Vigna umbellata
carvvaR025Vicia villosa cv. AU Merit genome v1.0Vicia villosa
carvvaR068Vicia villosa cv. AU Merit genome v1.0Vicia villosa
carvasR014Vigna angularis cv. Shumari genome v1.a1Vigna angularis
carvasR030Vigna angularis cv. Shumari genome v1.a1Vigna angularis
carvstR006Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
carvstR033Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
carvasR080Vigna angularis cv. Shumari genome v1.a1Vigna angularis
carvasR096Vigna angularis cv. Shumari genome v1.a1Vigna angularis
carvstR075Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
carvstR102Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
carvunR008Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
carpvfR004Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
carvunR040Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
carpvfR038Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
carpvfR045Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
carpvfR094Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Vigst.07G006300.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vigan.07G010000.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigun05g295900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Cc_v2.0_23216.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vum_07G00081.1Vigna umbellata FF25 genome v1.0Vigna umbellata
XM_058924468.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
PvulFLAVERTChr05.1001266Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
evm.Ca_v2.0_02872drCicArie.Frontier.2.0.Ca_v2.0_02872Cicer arietinumgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.Ca_v2.0_02872.1.exon2drCicArie.Frontier.2.0.Ca_v2.0_02872.1.exon2Cicer arietinumexon
drCicArie.Frontier.2.0.Ca_v2.0_02872.1.exon1drCicArie.Frontier.2.0.Ca_v2.0_02872.1.exon1Cicer arietinumexon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.Ca_v2.0_02872.1.utr3p1drCicArie.Frontier.2.0.Ca_v2.0_02872.1.utr3p1Cicer arietinumthree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.cds.Ca_v2.0_02872.1drCicArie.Frontier.2.0.cds.Ca_v2.0_02872.1Cicer arietinumCDS
drCicArie.Frontier.2.0.cds.Ca_v2.0_02872.1drCicArie.Frontier.2.0.cds.Ca_v2.0_02872.1_2Cicer arietinumCDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.Ca_v2.0_02872.1.utr5p1drCicArie.Frontier.2.0.Ca_v2.0_02872.1.utr5p1Cicer arietinumfive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.Ca_v2.0_02872.1drCicArie.Frontier.2.0.Ca_v2.0_02872.1Cicer arietinumpolypeptide
drCicArie.Frontier.2.0.Ca_v2.0_02872.1drCicArie.Frontier.2.0.Ca_v2.0_02872.1-proteinCicer arietinumpolypeptide


Homology
BLAST of evm.Ca_v2.0_02872 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:5376356-5376972 REVERSE LENGTH=141)

HSP 1 Score: 60.4622 bits (145), Expect = 2.704e-12
Identity = 34/80 (42.50%), Postives = 43/80 (53.75%), Query Frame = 0
Query:   44 TGWSNHCHSSVVPRALNPKTGDQNSTTSSQ----KEDLAYVAKLVVGSFGGAGAIKYGSAVFPETTTPNLVLALAIIFAP 119
            T + N  + S   R+      D  S  +      +EDL Y+ K+ VGS  GA  IKYGS +FP+ T PNL LAL II AP
Sbjct:   42 TSFRNPSNCSGTKRSFRVMASDDRSEQADNGQGIQEDLNYLLKIGVGSVAGAAIIKYGSVLFPQITRPNLTLALFIIIAP 121          
BLAST of evm.Ca_v2.0_02872 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2XB60|A0A1S2XB60_CICAR (Uncharacterized protein LOC101509442 OS=Cicer arietinum OX=3827 GN=LOC101509442 PE=4 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 3.323e-94
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
Query:    1 MAVWVSDIVGPGRSCNCKFSCHRRRINVNPPNTPLVSIIFPTTTGWSNHCHSSVVPRALNPKTGDQNSTTSSQKEDLAYVAKLVVGSFGGAGAIKYGSAVFPETTTPNLVLALAIIFAPVLVAVLLLVNESLRPKP 136
            MAVWVSDIVGPGRSCNCKFSCHRRRINVNPPNTPLVSIIFPTTTGWSNHCHSSVVPRALNPKTGDQNSTTSSQKEDLAYVAKLVVGSFGGAGAIKYGSAVFPETTTPNLVLALAIIFAPVLVAVLLLVNESLRPKP
Sbjct:    1 MAVWVSDIVGPGRSCNCKFSCHRRRINVNPPNTPLVSIIFPTTTGWSNHCHSSVVPRALNPKTGDQNSTTSSQKEDLAYVAKLVVGSFGGAGAIKYGSAVFPETTTPNLVLALAIIFAPVLVAVLLLVNESLRPKP 136          
BLAST of evm.Ca_v2.0_02872 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D4X3P4|A0A9D4X3P4_PEA (Uncharacterized protein OS=Pisum sativum OX=3888 GN=KIW84_058334 PE=4 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 3.027e-49
Identity = 88/136 (64.71%), Postives = 103/136 (75.74%), Query Frame = 0
Query:    1 MAVWVSDIVGPGRSCN-CKFSCHRRRINVNPPNTPLVSIIFPTTTGWSNHCHSSVVPRALNPKTGDQNSTTSSQKEDLAYVAKLVVGSFGGAGAIKYGSAVFPETTTPNLVLALAIIFAPVLVAVLLLVNESLRPK 135
            MA  VS+IVG G + N CKFSC RR++NV    +P  S++FP TT       SSVVPRAL+PK G+QNSTTSS +EDL YVAKLV+GSF GAG IKYG+ VFPE TTPNLVLAL II  PV+VAV LL+N+SLR K
Sbjct:    1 MATSVSEIVGLGSTYNNCKFSCFRRKVNV--VTSPNASLLFPATTTTR---LSSVVPRALDPKNGEQNSTTSSFQEDLVYVAKLVMGSFAGAGVIKYGTGVFPEITTPNLVLALVIISTPVIVAVFLLINQSLRQK 131          
BLAST of evm.Ca_v2.0_02872 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2Z6MS11|A0A2Z6MS11_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_113920 PE=4 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 3.694e-45
Identity = 93/138 (67.39%), Postives = 100/138 (72.46%), Query Frame = 0
Query:    1 MAVWVSDIVGPGR-SCNCKFSCHRRRINVNPPNTPLVSIIFPTTTGWSNHCHSSVVPRALNPKTGDQNSTTSS-QKEDLAYVAKLVVGSFGGAGAIKYGSAVFPETTTPNLVLALAIIFAPVLVAVLLLVNESLRPKP 136
            MAV VSDIVG  R S NC  S    ++NVNPPN  LV  +FPTTT       SSVV RA       QNSTTSS QKEDL YVAKLVV SFGGA AIKYGSA+FPE TTPNLVLAL II +PVLVAV LL+N+SLRPKP
Sbjct:    1 MAVSVSDIVGLRRTSKNCLLSRFSWKVNVNPPNKALVYTLFPTTTKIKKL--SSVV-RA-------QNSTTSSSQKEDLVYVAKLVVASFGGAAAIKYGSAIFPEITTPNLVLALVIISSPVLVAVFLLINQSLRPKP 128          
BLAST of evm.Ca_v2.0_02872 vs. ExPASy TrEMBL (2024)
Match: tr|G7II86|G7II86_MEDTR (Transmembrane protein, putative OS=Medicago truncatula OX=3880 GN=11432530 PE=4 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 8.317e-45
Identity = 88/135 (65.19%), Postives = 98/135 (72.59%), Query Frame = 0
Query:    1 MAVWVSDIVGPGRSCN-CKFSCHRRRINVNPPNTPLVS-IIFPTTTGWSNHCHSSVVPRALNPKTGDQNSTTSSQKEDLAYVAKLVVGSFGGAGAIKYGSAVFPETTTPNLVLALAIIFAPVLVAVLLLVNESLR 133
            MAV VS+IVG G +   C  S  RRR+NV  PNT L+S IIFPT   WS     SVV RA N      +ST SSQKED+ Y+AKLVVGSFGGAG IKYGSA+FPE TTPNLVLAL II  PVLVAVLLL+N+SLR
Sbjct:    1 MAVSVSEIVGLGSTYGYCNLSRFRRRVNVTSPNTTLISSIIFPTRRKWS-----SVVVRAQN------SSTYSSQKEDIVYLAKLVVGSFGGAGVIKYGSAIFPEITTPNLVLALVIISTPVLVAVLLLINQSLR 124          
BLAST of evm.Ca_v2.0_02872 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2K3NCP3|A0A2K3NCP3_TRIPR (Uncharacterized protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g024099 PE=4 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.531e-42
Identity = 89/140 (63.57%), Postives = 99/140 (70.71%), Query Frame = 0
Query:    1 MAVWVSDIVGPGR-SCNCKFSCHRRRINVNPPNTPLVSIIFPTTT--GWSNHCHSSVVPRALNPKTGDQNSTTSS-QKEDLAYVAKLVVGSFGGAGAIKYGSAVFPETTTPNLVLALAIIFAPVLVAVLLLVNESLRPKP 136
            MAV VS+IVG GR S NC  S    ++NVNPPN  LV  +FPTTT   WS+      V RA       QNSTTSS QKED  YV+KLVVGSF GA AIKYGSA+FPE TTPNLVLAL II  PVLVAVLLL+N+S RP+P
Sbjct:    3 MAVSVSEIVGLGRTSKNCLLSRFSWKVNVNPPNKALVYTLFPTTTIRKWSS------VVRA-------QNSTTSSSQKEDSVYVSKLVVGSFAGAAAIKYGSAIFPEITTPNLVLALVIISTPVLVAVLLLINQSRRPEP 129          
BLAST of evm.Ca_v2.0_02872 vs. ExPASy TrEMBL (2024)
Match: tr|I3SIF0|I3SIF0_LOTJA (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.244e-39
Identity = 78/121 (64.46%), Postives = 89/121 (73.55%), Query Frame = 0
Query:   18 KFSCHRRRINVNPPNTPL-----VSIIFPTTT-GWSNHCHSSVVPRALNPKTGDQNSTTSSQKEDLAYVAKLVVGSFGGAGAIKYGSAVFPETTTPNLVLALAIIFAPVLVAVLLLVNESL 132
            +F CHRR    NPPN+PL     + I F TTT  WS      V+PRA +PKTG+QNST +SQ EDL YVAKL  GSF GAGA+KYGSAVFPE TTPNLVLAL+II  PV+VAVLLL+ ESL
Sbjct:   11 RFLCHRRE---NPPNSPLFLQSPMPIRFSTTTTSWS-----CVIPRARDPKTGEQNSTNTSQVEDLVYVAKLAAGSFVGAGAVKYGSAVFPEITTPNLVLALSIILTPVVVAVLLLIKESL 123          
BLAST of evm.Ca_v2.0_02872 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8KDE0|A0A8B8KDE0_ABRPR (Uncharacterized protein LOC113854331 OS=Abrus precatorius OX=3816 GN=LOC113854331 PE=4 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.755e-37
Identity = 84/139 (60.43%), Postives = 96/139 (69.06%), Query Frame = 0
Query:    1 MAVWVSDIVGPGRSCNCKFSCHRRRINVNPPNTPL-----VSIIFPTTTGWSNHCHSSVVPRALNPKTGDQNSTTSSQKEDLAYVAKLVVGSFGGAGAIKYGSAVFPETTTPNLVLALAIIFAPVLVAVLLLVNESLRP 134
            M V VS+I     S + +F   R+R+N +P NTPL     + I F TTT       SS+VPRAL PK  DQNS TS Q EDLAYV KLVVGSF GAGAIKYGSA+FPE TTPN+VLALAII  PVLVAV LL+ ES +P
Sbjct:    1 MGVSVSEI-----SWSWRFMHLRQRVNPSP-NTPLFLPNPMPICFATTT-----SSSSLVPRALGPKREDQNSITSPQ-EDLAYVGKLVVGSFVGAGAIKYGSAIFPEITTPNIVLALAIILTPVLVAVFLLIKESRKP 127          
BLAST of evm.Ca_v2.0_02872 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445CIN7|A0A445CIN7_ARAHY (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A07g037401 PE=4 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.565e-33
Identity = 72/139 (51.80%), Postives = 89/139 (64.03%), Query Frame = 0
Query:    1 MAVWVSDIVGPGRSCNCKFSCHRRRINVNPPNTPL-------VSIIFPTTTGWSNHCHSSVVPRALNPKTGDQNSTTSSQKEDLAYVAKLVVGSFGGAGAIKYGSAVFPETTTPNLVLALAIIFAPVLVAVLLLVNESL 132
            M V V+++VG G    C+  C++ R  +N P TPL       V     + T W++   S + PRA  P+ GDQN  TSSQ EDL YV KLV GS  GA  IKYGSA+FPE TTPN+VLAL II APVL+AV+LL+ ESL
Sbjct:    1 MVVSVAEVVG-GWRLFCRSGCYQNRRKLNQPKTPLFLRNAMPVRFTLNSRTRWTS---SIIAPRAEGPQAGDQNPETSSQ-EDLWYVGKLVAGSVAGAAVIKYGSALFPEITTPNIVLALVIITAPVLLAVVLLIKESL 134          
BLAST of evm.Ca_v2.0_02872 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SFC7|A0A0S3SFC7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G010000 PE=4 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 5.287e-33
Identity = 74/124 (59.68%), Postives = 84/124 (67.74%), Query Frame = 0
Query:   12 GRSCNCKFSCHRRRINVNPPNTPLVSIIFPTTTGWSNHCHSSVVPRALNPKTGDQNSTTSSQKEDLAYVAKLVVGSFGGAGAIKYGSAVFPETTTPNLVLALAIIFAPVLVAVLLLVNESLRPK 135
            G   + K  C+ R   V+  NTPL   I PT  G++    S VV RA NPKT DQ+ST+SSQ EDL YV KLV GSF G GAIKYGSA+FPE TTPNLVLAL II  PVLVAV LL+ ESL  +
Sbjct:    5 GIGWSWKLLCNGR--GVSKTNTPLFLQI-PTQIGFTRF-SSRVVARASNPKTEDQSSTSSSQ-EDLVYVGKLVAGSFAGGGAIKYGSALFPEITTPNLVLALIIISTPVLVAVFLLIKESLTDQ 123          
BLAST of evm.Ca_v2.0_02872 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9UPH1|A0A0L9UPH1_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0211790 PE=4 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 5.287e-33
Identity = 74/124 (59.68%), Postives = 84/124 (67.74%), Query Frame = 0
Query:   12 GRSCNCKFSCHRRRINVNPPNTPLVSIIFPTTTGWSNHCHSSVVPRALNPKTGDQNSTTSSQKEDLAYVAKLVVGSFGGAGAIKYGSAVFPETTTPNLVLALAIIFAPVLVAVLLLVNESLRPK 135
            G   + K  C+ R   V+  NTPL   I PT  G++    S VV RA NPKT DQ+ST+SSQ EDL YV KLV GSF G GAIKYGSA+FPE TTPNLVLAL II  PVLVAV LL+ ESL  +
Sbjct:    5 GIGWSWKLLCNGR--GVSKTNTPLFLQI-PTQIGFTRF-SSRVVARASNPKTEDQSSTSSSQ-EDLVYVGKLVAGSFAGGGAIKYGSALFPEITTPNLVLALIIISTPVLVAVFLLIKESLTDQ 123          
The following BLAST results are available for this feature:
BLAST of evm.Ca_v2.0_02872 vs. Araport11
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs arabidopsis Araport11)
Total hits: 1
Match NameE-valueIdentityDescription
|2.704e-1242.50Symbols: no symbol available | no full name availa... [more]
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BLAST of evm.Ca_v2.0_02872 vs. Araport11
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt Swissprot )
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of evm.Ca_v2.0_02872 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2XB60|A0A1S2XB60_CICAR3.323e-94100.00Uncharacterized protein LOC101509442 OS=Cicer arie... [more]
tr|A0A9D4X3P4|A0A9D4X3P4_PEA3.027e-4964.71Uncharacterized protein OS=Pisum sativum OX=3888 G... [more]
tr|A0A2Z6MS11|A0A2Z6MS11_TRISU3.694e-4567.39Uncharacterized protein OS=Trifolium subterraneum ... [more]
tr|G7II86|G7II86_MEDTR8.317e-4565.19Transmembrane protein, putative OS=Medicago trunca... [more]
tr|A0A2K3NCP3|A0A2K3NCP3_TRIPR1.531e-4263.57Uncharacterized protein (Fragment) OS=Trifolium pr... [more]
tr|I3SIF0|I3SIF0_LOTJA1.244e-3964.46Uncharacterized protein OS=Lotus japonicus OX=3430... [more]
tr|A0A8B8KDE0|A0A8B8KDE0_ABRPR1.755e-3760.43Uncharacterized protein LOC113854331 OS=Abrus prec... [more]
tr|A0A445CIN7|A0A445CIN7_ARAHY3.565e-3351.80Uncharacterized protein OS=Arachis hypogaea OX=381... [more]
tr|A0A0S3SFC7|A0A0S3SFC7_PHAAN5.287e-3359.68Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A0L9UPH1|A0A0L9UPH1_PHAAN5.287e-3359.68Uncharacterized protein OS=Phaseolus angularis OX=... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum cv. CDC Frontier genome v2.0
Date Performed: 2024-07-26
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37224OS02G0804400 PROTEINcoord: 48..132

Sequences
The following sequences are available for this feature:

mRNA sequence

>drCicArie.Frontier.2.0.Ca_v2.0_02872.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_02872.1; Name=evm.Ca_v2.0_02872; organism=Cicer arietinum; type=mRNA; length=411bp
ATGGCAGTTTGGGTTTCAGATATAGTTGGACCTGGACGGAGCTGCAATTG
CAAGTTTTCATGTCACCGGCGTAGGATTAATGTTAATCCACCAAACACGC
CCTTAGTGTCAATTATTTTTCCCACAACAACGGGATGGTCTAATCACTGT
CACTCTAGTGTTGTTCCTCGAGCTCTGAATCCCAAAACGGGAGATCAAAA
CTCTACCACTTCATCTCAAAAGGAGGATTTAGCGTACGTGGCAAAACTAG
TGGTGGGTTCTTTTGGTGGTGCGGGTGCAATCAAATATGGCAGCGCTGTT
TTCCCTGAGACAACCACTCCCAACCTTGTGCTGGCTCTTGCCATCATTTT
TGCTCCTGTGCTTGTTGCTGTCTTACTTTTGGTCAATGAAAGTCTTCGTC
CGAAGCCATAG
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protein sequence of drCicArie.Frontier.2.0.Ca_v2.0_02872.1

>drCicArie.Frontier.2.0.Ca_v2.0_02872.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_02872.1; Name=drCicArie.Frontier.2.0.Ca_v2.0_02872.1; organism=Cicer arietinum; type=polypeptide; length=136bp
MAVWVSDIVGPGRSCNCKFSCHRRRINVNPPNTPLVSIIFPTTTGWSNHC
HSSVVPRALNPKTGDQNSTTSSQKEDLAYVAKLVVGSFGGAGAIKYGSAV
FPETTTPNLVLALAIIFAPVLVAVLLLVNESLRPKP
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mRNA from alignment at Ca1_v2.0:53837650..53838424-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drCicArie.Frontier.2.0.Ca_v2.0_02872.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_02872.1; Name=evm.Ca_v2.0_02872; organism=Cicer arietinum; type=mRNA; length=775bp; location=Sequence derived from: Ca1_v2.0:53837650..53838424- (Cicer arietinum
TGAGTTTTGTTTATTATTGAACTGTTACCGTTGATGTTCTGGTTTGTGGC TGTGAATAGATAGATATGGCAGTTTGGGTTTCAGATATAGTTGGACCTGG ACGGAGCTGCAATTGCAAGTTTTCATGTCACCGGCGTAGGATTAATGTTA ATCCACCAAACACGCCCTTAGTGTCAATTATTTTTCCCACAACAACGGGA TGGTCTAATCACTGTCACTCTAGTGTTGTTCCTCGAGCTCTGAATCCCAA AACGGGAGATCAAAACTCTACCACTTCATCTCAAGTAAATTCAACCCCTT TATCTTTTTTATTTATTTATTATTAAATTCATTGATAATAACAACCCTGA TTGCTAATACAAATGTATTCGAATGGTGTAAAATAGAAGGAGGATTTAGC GTACGTGGCAAAACTAGTGGTGGGTTCTTTTGGTGGTGCGGGTGCAATCA AATATGGCAGCGCTGTTTTCCCTGAGACAACCACTCCCAACCTTGTGCTG GCTCTTGCCATCATTTTTGCTCCTGTGCTTGTTGCTGTCTTACTTTTGGT CAATGAAAGTCTTCGTCCGAAGCCATAGAAACATTAGTTATTTATGATTA TGAACAGAAAATACTGTAATTATCATTTGTTTGTTTGCTGTTCTGTTGCA TTTCATAGTTTCTGTTTAGAGTACATCAACATTGCCGAAGAAATTGGACA CATTTCCAAACTAATAATCAAGTACTGTTTTTCAATGATAACAGGTTATT ACTTATTAGTAATATCAGATTGCAG
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Coding sequence (CDS) from alignment at Ca1_v2.0:53837650..53838424-

>drCicArie.Frontier.2.0.Ca_v2.0_02872.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_02872.1; Name=evm.Ca_v2.0_02872; organism=Cicer arietinum; type=CDS; length=411bp; location=Sequence derived from: Ca1_v2.0:53837650..53838424- (Cicer arietinum
ATGGCAGTTTGGGTTTCAGATATAGTTGGACCTGGACGGAGCTGCAATTG
CAAGTTTTCATGTCACCGGCGTAGGATTAATGTTAATCCACCAAACACGC
CCTTAGTGTCAATTATTTTTCCCACAACAACGGGATGGTCTAATCACTGT
CACTCTAGTGTTGTTCCTCGAGCTCTGAATCCCAAAACGGGAGATCAAAA
CTCTACCACTTCATCTCAAAAGGAGGATTTAGCGTACGTGGCAAAACTAG
TGGTGGGTTCTTTTGGTGGTGCGGGTGCAATCAAATATGGCAGCGCTGTT
TTCCCTGAGACAACCACTCCCAACCTTGTGCTGGCTCTTGCCATCATTTT
TGCTCCTGTGCTTGTTGCTGTCTTACTTTTGGTCAATGAAAGTCTTCGTC
CGAAGCCATAG
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