evm.Ca_v2.0_02860
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of evm.Ca_v2.0_02860 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:19580061-19580511 REVERSE LENGTH=129) HSP 1 Score: 83.9593 bits (206), Expect = 1.267e-21 Identity = 65/141 (46.10%), Postives = 83/141 (58.87%), Query Frame = 0 Query: 3 SFSQGIVLTTAMLVSSTVLYLVFSKQNITPTYIYGNHVSHDSNRNILSSCLYSEEKKRERKMMKKKKKNVRFEESVKEVKEKSEIIRKEKQR--------KRNRVQNNCKNETQKIRGIPANRIALYNGILRDQRHRMQCS 135 S S G+V+ TAM+ SST L+L S+Q GN S ++ IL SCL SEEKK++RK KKK K F E+VKE K E RK+ R K + + C+N+ +PANRIALYNGILRD+ HR+QCS Sbjct: 6 SCSHGVVIATAMVFSSTALFLAISRQ------FSGNQTS---DQQILRSCLSSEEKKKQRKNKKKKVK---FAENVKETKGNGEEYRKKSLRRIVPEQMIKPEKTGSVCRND------MPANRIALYNGILRDRDHRIQCS 128
BLAST of evm.Ca_v2.0_02860 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:5337734-5338219 FORWARD LENGTH=135) HSP 1 Score: 75.8702 bits (185), Expect = 2.698e-18 Identity = 58/144 (40.28%), Postives = 82/144 (56.94%), Query Frame = 0 Query: 1 MASFSQG-IVLTTAMLVSSTVLYLVFSKQNITPTYIYGNH----VSHDSNRNILSSCLYSEEKKRERKMMKKKKKNVRFEESVKEVKEKSEIIRKEKQRKRNRVQNNCK----NETQKIRGIPANRIALYNGILRDQRHRMQCS 135 M S S G +V+ TAM+ SST L+L ++Q +GNH V + R IL SCL SEE K++ KK K VRF ++VK+ K E R+ + +++ + K +I +PANR+ALYNGILRD+ HR+Q S Sbjct: 1 MLSCSNGTVVIATAMVCSSTALFLAMARQ------FHGNHQNPKVLDQTLRPILRSCLSSEETKKQ----GKKIKKVRFADNVKDTKGNGEEYRRRELNRKSVPKPVTKPGKTGSMCRISTMPANRMALYNGILRDRDHRVQYS 134
BLAST of evm.Ca_v2.0_02860 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2XB93|A0A1S2XB93_CICAR (Uncharacterized protein LOC101513413 OS=Cicer arietinum OX=3827 GN=LOC101513413 PE=4 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 9.137e-94 Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0 Query: 1 MASFSQGIVLTTAMLVSSTVLYLVFSKQNITPTYIYGNHVSHDSNRNILSSCLYSEEKKRERKMMKKKKKNVRFEESVKEVKEKSEIIRKEKQRKRNRVQNNCKNETQKIRGIPANRIALYNGILRDQRHRMQCS 135 MASFSQGIVLTTAMLVSSTVLYLVFSKQNITPTYIYGNHVSHDSNRNILSSCLYSEEKKRERKMMKKKKKNVRFEESVKEVKEKSEIIRKEKQRKRNRVQNNCKNETQKIRGIPANRIALYNGILRDQRHRMQCS Sbjct: 1 MASFSQGIVLTTAMLVSSTVLYLVFSKQNITPTYIYGNHVSHDSNRNILSSCLYSEEKKRERKMMKKKKKNVRFEESVKEVKEKSEIIRKEKQRKRNRVQNNCKNETQKIRGIPANRIALYNGILRDQRHRMQCS 135
BLAST of evm.Ca_v2.0_02860 vs. ExPASy TrEMBL (2024)
Match: tr|Q2HUA1|Q2HUA1_MEDTR (Transmembrane protein, putative OS=Medicago truncatula OX=3880 GN=11432517 PE=4 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.415e-55 Identity = 94/135 (69.63%), Postives = 110/135 (81.48%), Query Frame = 0 Query: 1 MASFSQGIVLTTAMLVSSTVLYLVFSKQNITPTY-IYGNHVSHDSNRNILSSCLYSEEKKRERKMMKKKKKN-VRFEESVKEVKEKSEIIRKEKQRKRNRVQNNCKNETQKIRGIPANRIALYNGILRDQRHRMQ 133 M S SQG+V TTAMLVSST+LYL FSK I P++ I G+HVSHD + IL SCLYSEEKKRERKM KK K VRFEESVKE +EKSE+ +KEKQRKRNRV +NC++E K RGIPANR+ALYNGILRD+ HR++ Sbjct: 1 MTSLSQGLVFTTAMLVSSTMLYLAFSKHKINPSFQILGSHVSHDPHTQILRSCLYSEEKKRERKMNSKKNKKKVRFEESVKESREKSEVAKKEKQRKRNRVHSNCRSEATKTRGIPANRMALYNGILRDRVHRIE 135
BLAST of evm.Ca_v2.0_02860 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D4X6Z2|A0A9D4X6Z2_PEA (Transmembrane protein OS=Pisum sativum OX=3888 GN=KIW84_058314 PE=4 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 8.255e-50 Identity = 93/139 (66.91%), Postives = 107/139 (76.98%), Query Frame = 0 Query: 1 MASFSQGIVLTTAMLVSSTVLYLVFSKQNITPT---YIYGNHVSHDSNRNILSSCLYSEEKKRERKM-MKKKKKNVRFEESVKEVKEK-SEIIRKEKQRKRNRVQNNCKNETQKIRGIPANRIALYNGILRDQRHRMQC 134 M SFSQG+V TTAM+VSST+LYLVFS+QN P I GNHV L SCLYSEEKKRERKM KK K VRFEESV + +EK SE++RKEKQRKRNRV NC++ET K RGIPANRIAL+NGILRD+ HR++C Sbjct: 1 MTSFSQGLVFTTAMVVSSTMLYLVFSRQNNNPNPSFQIQGNHV--------LRSCLYSEEKKRERKMNTKKTTKKVRFEESVNQEREKKSEVVRKEKQRKRNRVYGNCRSETSKSRGIPANRIALFNGILRDRVHRIEC 131
BLAST of evm.Ca_v2.0_02860 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8KFK8|A0A8B8KFK8_ABRPR (Uncharacterized protein LOC113855241 OS=Abrus precatorius OX=3816 GN=LOC113855241 PE=4 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 2.044e-46 Identity = 87/136 (63.97%), Postives = 104/136 (76.47%), Query Frame = 0 Query: 1 MASFSQGIVLTTAMLVSSTVLYLVFSKQNITPTY-IYGNHVSHDSNRNILSSCLYSEEKKRERKMMKKKKKNVRFEESVKEVKEKSEIIRKEKQRKRNRVQNNCKNETQKIRGIPANRIALYNGILRDQRHRMQCS 135 MAS SQG+VLTTAMLVSSTVLYL FS Q TP++ I+ N HDSN+ L SCLYSEEKK + KKKKK V+F ++VKE +E SE+ EKQRK+N V NNC+ ET + G+PANRIALYNGILRD+ HR+QCS Sbjct: 1 MASISQGLVLTTAMLVSSTVLYLAFSTQKTTPSFLIHWNSHFHDSNKGTLRSCLYSEEKK---RKRKKKKKKVQFADNVKESRETSEVGSIEKQRKQNGVSNNCRQETSETSGMPANRIALYNGILRDRVHRIQCS 133
BLAST of evm.Ca_v2.0_02860 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6P4B732|A0A6P4B732_ARADU (Uncharacterized protein LOC107459560 OS=Arachis duranensis OX=130453 GN=LOC107459560 PE=4 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 5.484e-33 Identity = 84/138 (60.87%), Postives = 100/138 (72.46%), Query Frame = 0 Query: 1 MASFSQGIVLTTAMLVSSTVLYLVFSKQNITPTYIYGNHVSHDSNRNILSSCLYSEEKKRERKMMKKKKKNVRFEESVKEVKEKSEIIRKEKQRKRNRVQN---NCKNETQKIRGIPANRIALYNGILRDQRHRMQCS 135 MAS SQGIV TTAM++SSTVLYL FS+ I +H S SN IL SCL SEEKKRERK+ KKKKK V+F E+VKE E+SE E+QRK+NRV + NC+N +R +PANRIALYNGILRD+ HRM+CS Sbjct: 1 MASISQGIVFTTAMVLSSTVLYLAFSRHKI-------HHHSPQSNNQILRSCLSSEEKKRERKLSKKKKKRVQFAENVKERIERSE----EEQRKQNRVSSRSTNCRN----VREMPANRIALYNGILRDRVHRMECS 123
BLAST of evm.Ca_v2.0_02860 vs. ExPASy TrEMBL (2024)
Match: tr|A0A834WAJ4|A0A834WAJ4_9FABA (Putative transmembrane protein OS=Senna tora OX=362788 GN=G2W53_028337 PE=4 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.063e-31 Identity = 75/138 (54.35%), Postives = 97/138 (70.29%), Query Frame = 0 Query: 1 MASFSQGIVLTTAMLVSSTVLYLVFSKQNITPTY-IYGNHVSHDSNRNILSSCLYSEEKKRERKMMKKKKKNVRFEESVKEVKEKSEIIRKE---KQRKRNRVQNN-CKNETQKIRGIPANRIALYNGILRDQRHRMQ 133 MAS SQG+VLTTAM+VSSTVLYL F +Q P I GN S +SN+ L SCL S +KK+ + K+ V+F ++VKE EK E RKE KQRK+NRV ++ C+ E+ +IRG+P NRIALYNGILRD+ HR++ Sbjct: 1 MASISQGLVLTTAMVVSSTVLYLGFLRQKSFPLLQIPGNSTSQESNKKALRSCLCSGKKKKGDFLKKR----VQFADNVKE--EKDETTRKEIRGKQRKKNRVSSSSCRIESPEIRGMPQNRIALYNGILRDRVHRLE 132
BLAST of evm.Ca_v2.0_02860 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8KQA5|A0A8B8KQA5_ABRPR (Uncharacterized protein LOC113857263 OS=Abrus precatorius OX=3816 GN=LOC113857263 PE=4 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.955e-30 Identity = 75/136 (55.15%), Postives = 96/136 (70.59%), Query Frame = 0 Query: 1 MASFSQGIVLTTAMLVSSTVLYLVFSKQNITPTY-IYGNHVSHDSNRNILSSCLYSEEKKRERKMMKKKKKNVRFEESVKEVKEKSEIIRKEKQRKRNRVQNN-CKNETQKIRGIPANRIALYNGILRDQRHRMQC 134 MAS S G VLTTAM++S+TVLYL FS+ +P + I G+ S S IL SCLYSEEKK++RK KKKK +F E+V VKE + +E+Q K+NRV ++ C NET +I +PANR+ALYNGILRD+ HRM C Sbjct: 1 MASISHGFVLTTAMVLSTTVLYLAFSRHKTSPLFQILGDSKSPHSENQILRSCLYSEEKKKKRKKKKKKKV--KFAENVM-VKE----VFREEQGKQNRVSSSICGNETSEIHEMPANRVALYNGILRDRVHRMAC 129
BLAST of evm.Ca_v2.0_02860 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86SKP8|A0AA86SKP8_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS15934 PE=4 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.809e-29 Identity = 76/135 (56.30%), Postives = 96/135 (71.11%), Query Frame = 0 Query: 1 MASFSQGIVLTTAMLVSSTVLYLVFSKQNITPTYIYGNHVSHDSNRNILSSCLYSEEKKRERKMMKKKKKNVRFEESVKEVKEKSEIIRKEKQRKRNRVQNNCKNETQKIRGIPANRIALYNGILRDQRHRMQCS 135 MAS SQ +VLT+AML+S+T+LY+ FS+Q TP++ H SN+ L SCLYSEEKK+E+K KKK K F +SVK KE E RKE+ NRV NNC++ET G+PANRIALYNGILR++ HRM+CS Sbjct: 1 MASISQSLVLTSAMLLSTTLLYVAFSRQKTTPSFQI-----HHSNKPTLRSCLYSEEKKKEKKKTKKKVK---FADSVK--KEGRE--RKEE----NRVSNNCRDETSDCVGMPANRIALYNGILRERVHRMECS 119
BLAST of evm.Ca_v2.0_02860 vs. ExPASy TrEMBL (2024)
Match: tr|I1KVD9|I1KVD9_SOYBN (Transmembrane protein OS=Glycine max OX=3847 GN=100786942 PE=4 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 8.917e-28 Identity = 79/139 (56.83%), Postives = 96/139 (69.06%), Query Frame = 0 Query: 2 ASFSQGIVLTTAMLVSSTVLYLVFSKQNITPTY-IYGNHVSHDSNRNILSSCLYSEEKKRERKMMKKKKKNVRFEESV--KEVKEKSEIIRKEKQRKRNRVQ---NNCKNETQKIRGIPANRIALYNGILRDQRHRMQC 134 +S SQG+V TTAMLVS+TVLYL FS+Q +P + I N S SN+ IL SC+YSEEKKRERK KKK K F E+V KEV+ S +EKQ ++NRV N C++E K +PANRIALYNGILRD+ HRM C Sbjct: 3 SSISQGLVFTTAMLVSTTVLYLAFSRQKTSPPFQISQNSNSLHSNKKILRSCIYSEEKKRERKKNKKKVK---FAENVMVKEVERVSNEKNREKQGRQNRVSLSSNECRSEIPKKHEMPANRIALYNGILRDRVHRMSC 138
BLAST of evm.Ca_v2.0_02860 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2SSD8|A0A0B2SSD8_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_021193 PE=4 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.196e-27 Identity = 79/139 (56.83%), Postives = 96/139 (69.06%), Query Frame = 0 Query: 2 ASFSQGIVLTTAMLVSSTVLYLVFSKQNITPTY-IYGNHVSHDSNRNILSSCLYSEEKKRERKMMKKKKKNVRFEESV--KEVKEKSEIIRKEKQRKRNRVQ---NNCKNETQKIRGIPANRIALYNGILRDQRHRMQC 134 +S SQG+V TTAMLVS+TVLYL FS+Q +P + I N S SN+ IL SC+YSEEKKRERK KKK K F E+V KEV+ S +EKQ ++NRV N C++E K +PANRIALYNGILRD+ HRM C Sbjct: 3 SSISQGLVFTTAMLVSTTVLYLAFSRQKTSPPFQISRNSNSLHSNKKILRSCIYSEEKKRERKKNKKKVK---FAENVMVKEVERVSNEKNREKQGRQNRVSLSSNECRSEIPKKHEMPANRIALYNGILRDRVHRMSC 138 The following BLAST results are available for this feature:
BLAST of evm.Ca_v2.0_02860 vs. Araport11
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs arabidopsis Araport11) Total hits: 2
BLAST of evm.Ca_v2.0_02860 vs. Araport11
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt Swissprot ) Total hits: 0
BLAST of evm.Ca_v2.0_02860 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum cv. CDC Frontier genome v2.0
Date Performed: 2024-07-26
Sequences
The
following sequences are available for this feature:
mRNA sequence >drCicArie.Frontier.2.0.Ca_v2.0_02860.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_02860.1; Name=evm.Ca_v2.0_02860; organism=Cicer arietinum; type=mRNA; length=408bpback to top protein sequence of drCicArie.Frontier.2.0.Ca_v2.0_02860.1 >drCicArie.Frontier.2.0.Ca_v2.0_02860.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_02860.1; Name=drCicArie.Frontier.2.0.Ca_v2.0_02860.1; organism=Cicer arietinum; type=polypeptide; length=135bpback to top mRNA from alignment at Ca1_v2.0:53749043..53749841+ Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>drCicArie.Frontier.2.0.Ca_v2.0_02860.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_02860.1; Name=evm.Ca_v2.0_02860; organism=Cicer arietinum; type=mRNA; length=799bp; location=Sequence derived from: Ca1_v2.0:53749043..53749841+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca1_v2.0:53749043..53749841+ >drCicArie.Frontier.2.0.Ca_v2.0_02860.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_02860.1; Name=evm.Ca_v2.0_02860; organism=Cicer arietinum; type=CDS; length=408bp; location=Sequence derived from: Ca1_v2.0:53749043..53749841+ (Cicer arietinumback to top |