Cc_v2.0_07575.1

Transcript Overview
NameCc_v2.0_07575.1
Unique NamedrCajCajn.Asha.2.0.Cc_v2.0_07575.1
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length522
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CcLG03_v2.0chromosomeCcLG03_v2.0:42579415..42579936 +Cajanus cajan cv. Asha genome v2.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
avjccaL367Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjccaL450Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0666Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0669Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0822Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0884Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL1153Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carccaL177Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccapsR328Pisum sativum Cameor genome v1aPisum sativum
ccapsR335Pisum sativum Cameor genome v1aPisum sativum
carccaL278Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
carccaL281Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccapsR389Pisum sativum Cameor genome v1aPisum sativum
ccapsR395Pisum sativum Cameor genome v1aPisum sativum
ccavrvR305Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccapvR344Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavfhR331Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccavfhR339Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccavfhR361Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR398Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavssR365Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavssR376Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavssR405Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavuR259Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR346Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR305Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR414Vigna umbellata FF25 genome v1.0Vigna umbellata
ccccaL0921Cajanus cajan Asha genome v1.0Cajanus cajan
ccccaL0969Cajanus cajan Asha genome v1.0Cajanus cajan
ccavunR226Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR343Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccavunR260Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR404Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.3g060680.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigun01g140800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Psat6g057200.1Pisum sativum Cameor genome v1aPisum sativum
evm.Ca_v2.0_08531Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
rna-XM_014639474.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg37179.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-TanjilR_23790Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun01g140800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
PvulFLAVERTChr07.1001248Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
jg1857.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Va03G070100.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
evm.Ca_v2.0_10975Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
rna-TanjilR_24558Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vum_04G02200.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vfaba.Hedin2.R1.3g070760.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Phvul.007G195500.2Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Phvul.001G158800.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-KK1_009939Cajanus cajan Asha genome v1.0Cajanus cajan
rna-KK1_026980Cajanus cajan Asha genome v1.0Cajanus cajan
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Cc_v2.0_07575drCajCajn.Asha.2.0.Cc_v2.0_07575Cajanus cajangene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.Cc_v2.0_07575.1drCajCajn.Asha.2.0.cds.Cc_v2.0_07575.1Cajanus cajanCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_07575.1.exon1drCajCajn.Asha.2.0.Cc_v2.0_07575.1.exon1Cajanus cajanexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drCajCajn.Asha.2.0.Cc_v2.0_07575.1drCajCajn.Asha.2.0.Cc_v2.0_07575.1Cajanus cajanpolypeptide
drCajCajn.Asha.2.0.Cc_v2.0_07575.1drCajCajn.Asha.2.0.Cc_v2.0_07575.1-proteinCajanus cajanpolypeptide


Homology
BLAST of Cc_v2.0_07575.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TUM9|A0A151TUM9_CAJCA (Transcriptional regulator SUPERMAN OS=Cajanus cajan OX=3821 GN=KK1_009939 PE=4 SV=1)

HSP 1 Score: 360.147 bits (923), Expect = 8.142e-126
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0
Query:    1 MDLNYPEESYSKSSSEETDDPSSEQNNDETIGTGRSYECIFCKRGFTTAQALGGHMNIHRKERANNKNKPVSIFPNSPPSSSNKVDGNNNYADLGFFSQFPSHSSTAPSIKPSHGEFLCVENQRGHHVFAQDWRKRNLSLYSNPLHFHEIKDKLEESEGDGLDLELRLGHHHP 173
            MDLNYPEESYSKSSSEETDDPSSEQNNDETIGTGRSYECIFCKRGFTTAQALGGHMNIHRKERANNKNKPVSIFPNSPPSSSNKVDGNNNYADLGFFSQFPSHSSTAPSIKPSHGEFLCVENQRGHHVFAQDWRKRNLSLYSNPLHFHEIKDKLEESEGDGLDLELRLGHHHP
Sbjct:    1 MDLNYPEESYSKSSSEETDDPSSEQNNDETIGTGRSYECIFCKRGFTTAQALGGHMNIHRKERANNKNKPVSIFPNSPPSSSNKVDGNNNYADLGFFSQFPSHSSTAPSIKPSHGEFLCVENQRGHHVFAQDWRKRNLSLYSNPLHFHEIKDKLEESEGDGLDLELRLGHHHP 173          
BLAST of Cc_v2.0_07575.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445FHA2|A0A445FHA2_GLYSO (Transcriptional regulator TAC1 OS=Glycine soja OX=3848 GN=D0Y65_051658 PE=4 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 1.675e-73
Identity = 130/186 (69.89%), Postives = 137/186 (73.66%), Query Frame = 0
Query:    1 MDLNYPEESYSKSSSEETDDPSSEQNNDETIGTGRSYECIFCKRGFTTAQALGGHMNIHRKERANNKNKPVSIFPNSPPSSSNKVDGNNNYADLGFFSQFPSHSST--------------APS-IKPSHGEFLCVENQRGHHVFAQDWRKRNLSLYSNPLHFHEIKDKLEESEGDGLDLELRLGHH 171
            MDLNYPEE YSKSS EET+D          +G GRSYECIFCKRGFTTAQALGGHMNIHRKERAN K K      +S PSSSN VDG NNYADLGF+SQ PS S+               APS I+PS  E LCVENQRGHHVF QDWRKRNLSLYSNPL FHEIKDK EESE +GLDLELRLGHH
Sbjct:    1 MDLNYPEECYSKSSCEETND---------DMGIGRSYECIFCKRGFTTAQALGGHMNIHRKERAN-KTKASF---SSHPSSSNNVDGINNYADLGFYSQIPSLSTAPDANSYREVFFPTAAPSVIRPSSHEVLCVENQRGHHVFEQDWRKRNLSLYSNPLGFHEIKDKFEESEDNGLDLELRLGHH 173          
BLAST of Cc_v2.0_07575.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1N9P1|I1N9P1_SOYBN (C2H2-type domain-containing protein OS=Glycine max OX=3847 GN=102664910 PE=4 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 3.451e-73
Identity = 129/186 (69.35%), Postives = 137/186 (73.66%), Query Frame = 0
Query:    1 MDLNYPEESYSKSSSEETDDPSSEQNNDETIGTGRSYECIFCKRGFTTAQALGGHMNIHRKERANNKNKPVSIFPNSPPSSSNKVDGNNNYADLGFFSQFPSHSST--------------APS-IKPSHGEFLCVENQRGHHVFAQDWRKRNLSLYSNPLHFHEIKDKLEESEGDGLDLELRLGHH 171
            MDLNYPEE YSKSS EET+D          +G GRSYECIFCKRGFTTAQALGGHMNIHRKERAN K K      +S PSSSN VDG NNYADLGF+SQ PS S+               APS I+PS  E LCVENQRGHHVF QDWRKRNLSLY+NPL FHEIKDK EESE +GLDLELRLGHH
Sbjct:    1 MDLNYPEECYSKSSCEETND---------DMGIGRSYECIFCKRGFTTAQALGGHMNIHRKERAN-KTKASF---SSHPSSSNNVDGINNYADLGFYSQIPSLSTAPDANSYREVFFPTAAPSVIRPSSHEVLCVENQRGHHVFEQDWRKRNLSLYTNPLGFHEIKDKFEESEDNGLDLELRLGHH 173          
BLAST of Cc_v2.0_07575.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445LCW0|A0A445LCW0_GLYSO (Transcriptional regulator TAC1 OS=Glycine soja OX=3848 GN=D0Y65_007324 PE=4 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.127e-72
Identity = 127/189 (67.20%), Postives = 135/189 (71.43%), Query Frame = 0
Query:    1 MDLNYPEESYSKSSSEETDDPSSEQNNDETIGTGRSYECIFCKRGFTTAQALGGHMNIHRKERANNKNKPVSIFPNSPPSSSNKVDGNNNYADLGFFSQFPSHSSTAP-----------------SIKP-SHGEFLCVENQRGHHVFAQDWRKRNLSLYS-NPLHFHEIKDKLEESEGDGLDLELRLGH 170
            MDLNYPEE YSKSSSEET+D          +G GRSYECI+CKRGFTTAQALGGHMNIHRKERAN            P SSSN VD  NNYADLGF+SQ PS SSTAP                 S++P SHGE LCVENQRGHHVF QDWRKRNLSLYS NPL FHEIKDK EESE +GLDLELRLG+
Sbjct:    1 MDLNYPEECYSKSSSEETNDD---------MGIGRSYECIYCKRGFTTAQALGGHMNIHRKERANKTKPSFQ----PPSSSSNNVDDINNYADLGFYSQIPSLSSTAPIDANSYREVFFPTTTASSVRPSSHGEVLCVENQRGHHVFEQDWRKRNLSLYSTNPLCFHEIKDKFEESEENGLDLELRLGY 176          
BLAST of Cc_v2.0_07575.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1JP16|I1JP16_SOYBN (C2H2-type domain-containing protein OS=Glycine max OX=3847 GN=102665426 PE=4 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.755e-71
Identity = 126/189 (66.67%), Postives = 134/189 (70.90%), Query Frame = 0
Query:    1 MDLNYPEESYSKSSSEETDDPSSEQNNDETIGTGRSYECIFCKRGFTTAQALGGHMNIHRKERANNKNKPVSIFPNSPPSSSNKVDGNNNYADLGFFSQFPSHSSTAP-----------------SIKP-SHGEFLCVENQRGHHVFAQDWRKRNLSLYS-NPLHFHEIKDKLEESEGDGLDLELRLGH 170
            MDLNYPEE YSKSSSEET+D          +G GRSYECI+CKRGFTTAQALGGHMNIHRKERAN            P SSSN VD  NNYADLGF+SQ  S SSTAP                 S++P SHGE LCVENQRGHHVF QDWRKRNLSLYS NPL FHEIKDK EESE +GLDLELRLG+
Sbjct:    1 MDLNYPEECYSKSSSEETNDD---------MGIGRSYECIYCKRGFTTAQALGGHMNIHRKERANKTKPSFQ----PPSSSSNNVDDINNYADLGFYSQISSLSSTAPIDANSYREVFFPTTTASSVRPSSHGEVLCVENQRGHHVFEQDWRKRNLSLYSTNPLCFHEIKDKFEESEENGLDLELRLGY 176          
BLAST of Cc_v2.0_07575.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86RXR5|A0AA86RXR5_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS3193 PE=4 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 9.211e-61
Identity = 112/185 (60.54%), Postives = 124/185 (67.03%), Query Frame = 0
Query:    1 MDLNYPEESYSKSSSEETDDPSSEQNNDETIGTGRSYECIFCKRGFTTAQALGGHMNIHRKERANNKNKPVSIFPNSPPSSSNKVDGNNNYADLGFFSQFPSHSS--------------TAPSIKPSHGEFLCVENQRGHHVFAQDWRKRNLSLYSNPLHFHEIKDKLEESEGDGLDLELRLGHH 171
            MDLN+PEE YSKSSSEET D        + +GTGRSYECIFCKRGFTTAQALGGHMNIHRKERAN            PPS+S KVDG NNYADL   SQ PSH +               A S++PSHGE LC E  +   VF QDWR RN +LY+NP  FHEIKDK E+ E +GLDLELRLGHH
Sbjct:    1 MDLNHPEECYSKSSSEETSD-------HDLVGTGRSYECIFCKRGFTTAQALGGHMNIHRKERANKTKPSFP----PPPSTSTKVDGINNYADLVSHSQTPSHCTPPDANSFGDVRFPAAARSVRPSHGEVLCAEENQLGLVFEQDWRLRNFNLYTNPPCFHEIKDKFEDIEENGLDLELRLGHH 174          
BLAST of Cc_v2.0_07575.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3RY28|A0A0S3RY28_PHAAN (C2H2-type domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G307300 PE=4 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 6.770e-57
Identity = 98/181 (54.14%), Postives = 119/181 (65.75%), Query Frame = 0
Query:    1 MDLNYPEESYSKSSSEETDDPSSEQNNDETIGTGRSYECIFCKRGFTTAQALGGHMNIHRKERANNKNKPVSIFPNSPPSSSNKVDGNNNYADLGFFSQFPSHSS-----------TAPSIKPSHGEFLCVENQRGHHVFAQDWRKRNLSLYSNPLHFHEIKDKLEESEGDGLDLELRLGH 170
            MDLNYPE+ YS  S+ ET       ++ + +GT RSYECIFCKRGFTTAQALGGHMNIHRK+RANN  KP       PPS+SNKVD  NN+ADL    Q P+ S+           T+ ++ PSH +    E  +  HVF QDW   NLS YSNPL  H+IK+K E++E +GLDLELRLGH
Sbjct:    1 MDLNYPEDFYSNISTLET-------SHHDLLGTARSYECIFCKRGFTTAQALGGHMNIHRKQRANNNTKPTV----PPPSTSNKVDATNNHADL---VQIPTQSTPSHANHLSFPPTSLTVTPSHAQLSSAEKDQLGHVFLQDWSTTNLSFYSNPLCLHQIKNKFEDTEENGLDLELRLGH 167          
BLAST of Cc_v2.0_07575.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9T485|A0A0L9T485_PHAAN (Transcriptional regulator TAC1 Protein TELOMERASE OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0051370 PE=4 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 6.770e-57
Identity = 98/181 (54.14%), Postives = 119/181 (65.75%), Query Frame = 0
Query:    1 MDLNYPEESYSKSSSEETDDPSSEQNNDETIGTGRSYECIFCKRGFTTAQALGGHMNIHRKERANNKNKPVSIFPNSPPSSSNKVDGNNNYADLGFFSQFPSHSS-----------TAPSIKPSHGEFLCVENQRGHHVFAQDWRKRNLSLYSNPLHFHEIKDKLEESEGDGLDLELRLGH 170
            MDLNYPE+ YS  S+ ET       ++ + +GT RSYECIFCKRGFTTAQALGGHMNIHRK+RANN  KP       PPS+SNKVD  NN+ADL    Q P+ S+           T+ ++ PSH +    E  +  HVF QDW   NLS YSNPL  H+IK+K E++E +GLDLELRLGH
Sbjct:    1 MDLNYPEDFYSNISTLET-------SHHDLLGTARSYECIFCKRGFTTAQALGGHMNIHRKQRANNNTKPTV----PPPSTSNKVDATNNHADL---VQIPTQSTPSHANHLSFPPTSLTVTPSHAQLSSAEKDQLGHVFLQDWSTTNLSFYSNPLCLHQIKNKFEDTEENGLDLELRLGH 167          
BLAST of Cc_v2.0_07575.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7CYP2|V7CYP2_PHAVU (C2H2-type domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G158800g PE=4 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 8.107e-54
Identity = 101/185 (54.59%), Postives = 117/185 (63.24%), Query Frame = 0
Query:    1 MDLNYPEESYSKSSSEETDDPSSEQNNDETIGTGRSYECIFCKRGFTTAQALGGHMNIHRKERANNKNKPVSIFPNSPPSSSNKVDGNNNYADLGFFSQFPSH--------------SSTAPSIKPSHGEFLCVENQRGHHVFAQDWRKRNLSLYSNPLHFHEIKDKLEESEGDGLDLELRLGHH 171
            MDLNYP++                    + +GTGRSYECIFCKRGFTTAQALGGHMNIHRKERAN            PPS+SNK DG  NYADL F SQ P+H              S+TA S++PSHGE LC E  +  HVF QDWR RN S Y+NPL FHE+ +K E++E +GLDLELRLGHH
Sbjct:    1 MDLNYPQDH-------------------DLVGTGRSYECIFCKRGFTTAQALGGHMNIHRKERANKTKPTFP----PPPSTSNKPDGITNYADLVFHSQIPTHSPSPDANSFRDVCFSATALSVRPSHGEVLCAEKNQLGHVFVQDWRTRNFSFYTNPLCFHEM-NKFEDTEENGLDLELRLGHH 161          
BLAST of Cc_v2.0_07575.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151S8R3|A0A151S8R3_CAJCA (Transcriptional regulator RABBIT EARS OS=Cajanus cajan OX=3821 GN=KK1_026980 PE=4 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 1.918e-53
Identity = 102/183 (55.74%), Postives = 115/183 (62.84%), Query Frame = 0
Query:   20 DPSSEQNNDETIGTGRSYECIFCKRGFTTAQALGGHMNIHRKERANNKNKPVSIFPNSPPSSSNKVDGNNNYADLGFFSQ---------------------------FPSHSSTAPSIKPS---HGEFLCVENQRG-HHVFAQDWRKRNLSLYSNPLHFHEIKDKLEESEGDGLDLELRLGHH 171
            D SSE NNDE +GTGRSYEC+FC+RGFTTAQALGGHMNIHRK+RAN         PN PPSSS KVD + +YADLG +S                            FPSH+  A S  PS   +GE LCVENQR    +F QDWR+R LSLY+NPL  HE KDK+   E D LDLELRLGHH
Sbjct:   13 DRSSEHNNDE-MGTGRSYECVFCRRGFTTAQALGGHMNIHRKDRANKAK------PNFPPSSSTKVDESYHYADLGLYSASNPRGNYYSSLPDREVDTNYNYCHQLYFPSHTCGARSSPPSRVQYGEVLCVENQRDPQLLFGQDWRQRGLSLYTNPLCVHENKDKINNGEEDDLDLELRLGHH 188          
BLAST of Cc_v2.0_07575.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SR34|TA1_ARATH (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 7.584e-12
Identity = 27/47 (57.45%), Postives = 34/47 (72.34%), Query Frame = 0
Query:   23 SEQNNDETIGTGRSYECIFCKRGFTTAQALGGHMNIHRKERANNKNK 69
            S Q  D+++   RSY C FC RGF+ AQALGGHMNIHR++RA  + K
Sbjct:   21 SHQGVDDSLNQSRSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQK 67          
BLAST of Cc_v2.0_07575.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q38895|SUP_ARATH (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 1.274e-9
Identity = 59/184 (32.07%), Postives = 77/184 (41.85%), Query Frame = 0
Query:   24 EQNNDETIGTG---RSYECIFCKRGFTTAQALGGHMNIHRKERANNK--------------------------------NKPVSIFPN-SPPSSSNKVDGNNNYADLGFFSQFPSHSSTAPSIKPSHGEFLCVENQRGHHVFAQDWRK--RNLSLYSNPLHFHEIKDKLEESEGDGLDLELRLG 169
            +Q++D  +G     RSY C FCKR F +AQALGGHMN+HR++RA  +                                + P+++FP  SPPSS     G          S  P    T  +   +    L VE        ++D  K  RN  + S  L    I     ESE D LDLELRLG
Sbjct:   31 QQDHDYLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPPYPNPNYSYSTMANSPPPHHSPLTLFPTLSPPSSPRYRAG-------LIRSLSPKSKHTPENACKTKKSSLLVEAGEATRFTSKDACKILRNDEIISLELEIGLIN----ESEQD-LDLELRLG 202          
BLAST of Cc_v2.0_07575.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|O80942|ZFP10_ARATH (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 7.983e-9
Identity = 29/63 (46.03%), Postives = 41/63 (65.08%), Query Frame = 0
Query:    6 PEESYSKSSSEETDDPSSEQNNDETIGTGRSYECIFCKRGFTTAQALGGHMNIHRKERANNKN 68
            P++S  +SS EE     +E +   ++   RSY C FC+R F +AQALGGHMN+HR++RA  K 
Sbjct:   10 PKKSNKESSWEEL--AFAEDDAAGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQ 70          
BLAST of Cc_v2.0_07575.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9LHS9|RBE_ARATH (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2)

HSP 1 Score: 55.8398 bits (133), Expect = 9.890e-9
Identity = 29/64 (45.31%), Postives = 37/64 (57.81%), Query Frame = 0
Query:   35 RSYECIFCKRGFTTAQALGGHMNIHRKERANNKNK---PVSIFPNSPPSSSNKVDGNNNYADLG 95
            RSY C FC R F +AQALGGHMN+HR++RA  K +   P S    +PP    + D      D+G
Sbjct:   53 RSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSPSSTDQATPP----ECDRQQQVLDVG 112          
BLAST of Cc_v2.0_07575.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SLB8|ZFP11_ARATH (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 2.593e-8
Identity = 21/40 (52.50%), Postives = 30/40 (75.00%), Query Frame = 0
Query:   35 RSYECIFCKRGFTTAQALGGHMNIHRKERANNKNKPVSIF 74
            ++Y C FC+R F +AQALGGHMN+HR++RA  +  P  +F
Sbjct:   47 KNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPSWLF 86          
BLAST of Cc_v2.0_07575.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FFX4|KNU_ARATH (Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1)

HSP 1 Score: 50.0618 bits (118), Expect = 5.980e-7
Identity = 24/57 (42.11%), Postives = 34/57 (59.65%), Query Frame = 0
Query:   35 RSYECIFCKRGFTTAQALGGHMNIHRKERANNKNKPVSIFPNSPPSSSNKVDGNNNY 91
            R + C +C R F T+QALGGH N H++ERA  +   + +  NSPP     +D NN +
Sbjct:   36 RLFPCQYCPRKFYTSQALGGHQNAHKRERAAARRN-LGVLANSPPI----LDDNNTF 87          
BLAST of Cc_v2.0_07575.1 vs. Araport11
Match: | (Symbols: ZP1, EMB3022 | ZINC FINGER PROTEIN 1, EMBRYO DEFECTIVE 3022 | chr4:9906918-9907532 FORWARD LENGTH=174)

HSP 1 Score: 63.929 bits (154), Expect = 6.433e-13
Identity = 52/140 (37.14%), Postives = 72/140 (51.43%), Query Frame = 0
Query:   35 RSYECIFCKRGFTTAQALGGHMNIHRKERANNKNKPVSIFPNSPPSSSNKVDGNNNYADLGFFSQFPSHSSTAPSIKP-SHGEFLCVENQRGHHVFAQDWRKRNLSLYSNPLHFHEIKDKLEESEGDGLDLELRLGHHHP 173
            RSY C FC+R F +AQALGGHMN+HR++RA+++    S    +  S    +  N+    L   +      STA +I+  SH  F  ++N  G  +F       N  LY +      +K+    S  D LDLELRLGHH P
Sbjct:   44 RSYTCNFCRREFRSAQALGGHMNVHRRDRASSRAHQGSTVAAAARSGHGGMLLNSCAPPLPTTTLII--QSTASNIEGLSH--FYQLQNPSG--IFGNSGDMVN--LYGDDESIGSMKEATGTSV-DELDLELRLGHHPP 174          
BLAST of Cc_v2.0_07575.1 vs. Araport11
Match: | (Symbols: TAC1 | telomerase activator1 | chr3:2856141-2856659 FORWARD LENGTH=172)

HSP 1 Score: 63.5438 bits (153), Expect = 7.804e-13
Identity = 27/47 (57.45%), Postives = 34/47 (72.34%), Query Frame = 0
Query:   23 SEQNNDETIGTGRSYECIFCKRGFTTAQALGGHMNIHRKERANNKNK 69
            S Q  D+++   RSY C FC RGF+ AQALGGHMNIHR++RA  + K
Sbjct:   21 SHQGVDDSLNQSRSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQK 67          
BLAST of Cc_v2.0_07575.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:17496993-17497406 FORWARD LENGTH=137)

HSP 1 Score: 60.4622 bits (145), Expect = 6.742e-12
Identity = 42/133 (31.58%), Postives = 65/133 (48.87%), Query Frame = 0
Query:   37 YECIFCKRGFTTAQALGGHMNIHRKERANNKNKPVSIFPNSPPSSSNKVDGNNNYADLGFFSQFPSHSSTAPSIKPSHGEFLCVENQRGHHVFAQDWRKRNLSLYSNPLHFHEIKDKLEESEGDGLDLELRLG 169
            YEC FCKRGFT AQALGGHMNIHR++R N       +  ++  + S      +  +DLG + Q  S       ++ +   +  +++ R   + +   R+ N+ +                 EG+ +DLELRLG
Sbjct:   35 YECTFCKRGFTNAQALGGHMNIHRRDRLN----KAKVQNDADVALSQTHRCFHVASDLGGYEQVDS-----VVLRTTTSNY--IQHLR---IGSMATRRENVVV-----------------EGNEIDLELRLG 136          
BLAST of Cc_v2.0_07575.1 vs. Araport11
Match: | (Symbols: SUP, FON1, FLO10 | FLORAL ORGAN NUMBER 1, FLORAL DEFECTIVE 10, SUPERMAN | chr3:8242504-8243118 FORWARD LENGTH=204)

HSP 1 Score: 58.151 bits (139), Expect = 1.303e-10
Identity = 59/184 (32.07%), Postives = 77/184 (41.85%), Query Frame = 0
Query:   24 EQNNDETIGTG---RSYECIFCKRGFTTAQALGGHMNIHRKERANNK--------------------------------NKPVSIFPN-SPPSSSNKVDGNNNYADLGFFSQFPSHSSTAPSIKPSHGEFLCVENQRGHHVFAQDWRK--RNLSLYSNPLHFHEIKDKLEESEGDGLDLELRLG 169
            +Q++D  +G     RSY C FCKR F +AQALGGHMN+HR++RA  +                                + P+++FP  SPPSS     G          S  P    T  +   +    L VE        ++D  K  RN  + S  L    I     ESE D LDLELRLG
Sbjct:   31 QQDHDYLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPPYPNPNYSYSTMANSPPPHHSPLTLFPTLSPPSSPRYRAG-------LIRSLSPKSKHTPENACKTKKSSLLVEAGEATRFTSKDACKILRNDEIISLELEIGLIN----ESEQD-LDLELRLG 202          
BLAST of Cc_v2.0_07575.1 vs. Araport11
Match: | (Symbols: ZP1, EMB3022 | ZINC FINGER PROTEIN 1, EMBRYO DEFECTIVE 3022 | chr4:9906918-9907532 FORWARD LENGTH=204)

HSP 1 Score: 58.151 bits (139), Expect = 1.317e-10
Identity = 52/166 (31.33%), Postives = 76/166 (45.78%), Query Frame = 0
Query:   35 RSYECIFCKRGFTTAQALGGHMNIHRKERANNKNKPVSIFPNSPPSSSNKVDGNNNYADLGFFSQFPSHSSTAPSIKPSHGEFLCVENQRGHHVFAQDWRKRNL-------------SLYSNPLHF-----------HEIKDKLEESEG---DGLDLELRLGHHHP 173
            RSY C FC+R F +AQALGGHMN+HR++RA+++    S    +  S    +  N+    L   +      STA +I+     F  ++N  G  +F       NL             S+ ++P+              E    ++E+ G   D LDLELRLGHH P
Sbjct:   44 RSYTCNFCRREFRSAQALGGHMNVHRRDRASSRAHQGSTVAAAARSGHGGMLLNSCAPPLPTTTLI--IQSTASNIE-GLSHFYQLQNPSG--IFGNSGDMVNLYGTTSFPPSNLPFSMLNSPVEVPPRLIEYSTGDDESIGSMKEATGTSVDELDLELRLGHHPP 204          
BLAST of Cc_v2.0_07575.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:19938706-19939134 FORWARD LENGTH=142)

HSP 1 Score: 55.8398 bits (133), Expect = 3.977e-10
Identity = 23/31 (74.19%), Postives = 26/31 (83.87%), Query Frame = 0
Query:   34 GRSYECIFCKRGFTTAQALGGHMNIHRKERA 64
             R Y C FC+RGF+ AQALGGHMNIHRK+RA
Sbjct:   18 ARPYICEFCERGFSNAQALGGHMNIHRKDRA 48          
BLAST of Cc_v2.0_07575.1 vs. Araport11
Match: | (Symbols: ATZFP10, ZFP10 | ZINC-FINGER PROTEIN 10, zinc-finger protein 10 | chr2:15827706-15828620 REVERSE LENGTH=304)

HSP 1 Score: 56.9954 bits (136), Expect = 8.096e-10
Identity = 29/63 (46.03%), Postives = 41/63 (65.08%), Query Frame = 0
Query:    6 PEESYSKSSSEETDDPSSEQNNDETIGTGRSYECIFCKRGFTTAQALGGHMNIHRKERANNKN 68
            P++S  +SS EE     +E +   ++   RSY C FC+R F +AQALGGHMN+HR++RA  K 
Sbjct:   10 PKKSNKESSWEEL--AFAEDDAAGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQ 70          
BLAST of Cc_v2.0_07575.1 vs. Araport11
Match: | (Symbols: RBE, RAB | RABBIT EARS | chr5:1828426-1829106 REVERSE LENGTH=226)

HSP 1 Score: 55.8398 bits (133), Expect = 1.009e-9
Identity = 29/64 (45.31%), Postives = 37/64 (57.81%), Query Frame = 0
Query:   35 RSYECIFCKRGFTTAQALGGHMNIHRKERANNKNK---PVSIFPNSPPSSSNKVDGNNNYADLG 95
            RSY C FC R F +AQALGGHMN+HR++RA  K +   P S    +PP    + D      D+G
Sbjct:   53 RSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSPSSTDQATPP----ECDRQQQVLDVG 112          
BLAST of Cc_v2.0_07575.1 vs. Araport11
Match: | (Symbols: ATZFP11, ZFP11 | ZINC FINGER PROTEIN 11, zinc finger protein 11 | chr2:17658150-17658794 FORWARD LENGTH=214)

HSP 1 Score: 54.6842 bits (130), Expect = 2.647e-9
Identity = 21/40 (52.50%), Postives = 30/40 (75.00%), Query Frame = 0
Query:   35 RSYECIFCKRGFTTAQALGGHMNIHRKERANNKNKPVSIF 74
            ++Y C FC+R F +AQALGGHMN+HR++RA  +  P  +F
Sbjct:   47 KNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPSWLF 86          
BLAST of Cc_v2.0_07575.1 vs. Araport11
Match: | (Symbols: ATZFP11, ZFP11 | ZINC FINGER PROTEIN 11, zinc finger protein 11 | chr2:17658150-17658794 FORWARD LENGTH=214)

HSP 1 Score: 54.6842 bits (130), Expect = 2.647e-9
Identity = 21/40 (52.50%), Postives = 30/40 (75.00%), Query Frame = 0
Query:   35 RSYECIFCKRGFTTAQALGGHMNIHRKERANNKNKPVSIF 74
            ++Y C FC+R F +AQALGGHMN+HR++RA  +  P  +F
Sbjct:   47 KNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPSWLF 86          
The following BLAST results are available for this feature:
BLAST of Cc_v2.0_07575.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A151TUM9|A0A151TUM9_CAJCA8.142e-126100.00Transcriptional regulator SUPERMAN OS=Cajanus caja... [more]
tr|A0A445FHA2|A0A445FHA2_GLYSO1.675e-7369.89Transcriptional regulator TAC1 OS=Glycine soja OX=... [more]
tr|I1N9P1|I1N9P1_SOYBN3.451e-7369.35C2H2-type domain-containing protein OS=Glycine max... [more]
tr|A0A445LCW0|A0A445LCW0_GLYSO2.127e-7267.20Transcriptional regulator TAC1 OS=Glycine soja OX=... [more]
tr|I1JP16|I1JP16_SOYBN2.755e-7166.67C2H2-type domain-containing protein OS=Glycine max... [more]
tr|A0AA86RXR5|A0AA86RXR5_9FABA9.211e-6160.54Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|A0A0S3RY28|A0A0S3RY28_PHAAN6.770e-5754.14C2H2-type domain-containing protein OS=Vigna angul... [more]
tr|A0A0L9T485|A0A0L9T485_PHAAN6.770e-5754.14Transcriptional regulator TAC1 Protein TELOMERASE ... [more]
tr|V7CYP2|V7CYP2_PHAVU8.107e-5454.59C2H2-type domain-containing protein OS=Phaseolus v... [more]
tr|A0A151S8R3|A0A151S8R3_CAJCA1.918e-5355.74Transcriptional regulator RABBIT EARS OS=Cajanus c... [more]
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BLAST of Cc_v2.0_07575.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot )
Total hits: 6
Match NameE-valueIdentityDescription
sp|Q9SR34|TA1_ARATH7.584e-1257.45Transcriptional regulator TAC1 OS=Arabidopsis thal... [more]
sp|Q38895|SUP_ARATH1.274e-932.07Transcriptional regulator SUPERMAN OS=Arabidopsis ... [more]
sp|O80942|ZFP10_ARATH7.983e-946.03Zinc finger protein 10 OS=Arabidopsis thaliana OX=... [more]
sp|Q9LHS9|RBE_ARATH9.890e-945.31Probable transcriptional regulator RABBIT EARS OS=... [more]
sp|Q9SLB8|ZFP11_ARATH2.593e-852.50Zinc finger protein 11 OS=Arabidopsis thaliana OX=... [more]
sp|Q9FFX4|KNU_ARATH5.980e-742.11Zinc finger protein KNUCKLES OS=Arabidopsis thalia... [more]
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BLAST of Cc_v2.0_07575.1 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
|6.433e-1337.14Symbols: ZP1, EMB3022 | ZINC FINGER PROTEIN 1, EMB... [more]
|7.804e-1357.45Symbols: TAC1 | telomerase activator1 | chr3:28561... [more]
|6.742e-1231.58Symbols: no symbol available | no full name availa... [more]
|1.303e-1032.07Symbols: SUP, FON1, FLO10 | FLORAL ORGAN NUMBER 1,... [more]
|1.317e-1031.33Symbols: ZP1, EMB3022 | ZINC FINGER PROTEIN 1, EMB... [more]
|3.977e-1074.19Symbols: no symbol available | no full name availa... [more]
|8.096e-1046.03Symbols: ATZFP10, ZFP10 | ZINC-FINGER PROTEIN 10, ... [more]
|1.009e-945.31Symbols: RBE, RAB | RABBIT EARS | chr5:1828426-182... [more]
|2.647e-952.50Symbols: ATZFP11, ZFP11 | ZINC FINGER PROTEIN 11, ... [more]
|2.647e-952.50Symbols: ATZFP11, ZFP11 | ZINC FINGER PROTEIN 11, ... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typePFAMPF13912zf-C2H2_6coord: 37..62
e-value: 0.024
score: 25.9
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 37..64
score: 11.385298
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 9..90
e-value: 3.7E-7
score: 31.9
IPR052426Plant developmental regulatorPANTHERPTHR45801OS07G0101800 PROTEINcoord: 8..171
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 35..64

Sequences
The following sequences are available for this feature:

mRNA sequence

>drCajCajn.Asha.2.0.Cc_v2.0_07575.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_07575.1; Name=Cc_v2.0_07575.1; organism=Cajanus cajan; type=mRNA; length=522bp
ATGGACCTAAACTACCCAGAAGAGAGCTACTCCAAGAGCTCCAGTGAAGA
AACTGATGATCCATCATCTGAGCAGAACAATGATGAGACGATAGGAACTG
GTAGATCCTACGAGTGCATCTTTTGCAAGAGAGGCTTCACCACAGCACAA
GCCTTAGGTGGACACATGAACATACACAGAAAAGAAAGAGCCAACAACAA
GAACAAACCCGTTTCAATATTCCCTAATTCTCCTCCTTCGAGTTCAAACA
AAGTTGATGGCAACAACAACTATGCAGATCTCGGATTCTTCTCACAATTT
CCAAGCCATTCCAGTACTGCACCAAGTATTAAACCTTCTCATGGTGAGTT
TTTGTGTGTAGAAAACCAAAGGGGTCATCATGTGTTTGCGCAAGATTGGA
GGAAGAGAAATTTGAGCTTGTATAGTAATCCATTGCATTTTCATGAAATT
AAAGATAAGCTTGAAGAGAGTGAAGGGGATGGACTAGATTTGGAGCTGAG
GCTTGGTCATCATCATCCATAG
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protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_07575.1

>drCajCajn.Asha.2.0.Cc_v2.0_07575.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_07575.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_07575.1; organism=Cajanus cajan; type=polypeptide; length=173bp
MDLNYPEESYSKSSSEETDDPSSEQNNDETIGTGRSYECIFCKRGFTTAQ
ALGGHMNIHRKERANNKNKPVSIFPNSPPSSSNKVDGNNNYADLGFFSQF
PSHSSTAPSIKPSHGEFLCVENQRGHHVFAQDWRKRNLSLYSNPLHFHEI
KDKLEESEGDGLDLELRLGHHHP
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mRNA from alignment at CcLG03_v2.0:42579415..42579936+

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>drCajCajn.Asha.2.0.Cc_v2.0_07575.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_07575.1; Name=Cc_v2.0_07575.1; organism=Cajanus cajan; type=mRNA; length=522bp; location=Sequence derived from: CcLG03_v2.0:42579415..42579936+ (Cajanus cajan
ATGGACCTAAACTACCCAGAAGAGAGCTACTCCAAGAGCTCCAGTGAAGA AACTGATGATCCATCATCTGAGCAGAACAATGATGAGACGATAGGAACTG GTAGATCCTACGAGTGCATCTTTTGCAAGAGAGGCTTCACCACAGCACAA GCCTTAGGTGGACACATGAACATACACAGAAAAGAAAGAGCCAACAACAA GAACAAACCCGTTTCAATATTCCCTAATTCTCCTCCTTCGAGTTCAAACA AAGTTGATGGCAACAACAACTATGCAGATCTCGGATTCTTCTCACAATTT CCAAGCCATTCCAGTACTGCACCAAGTATTAAACCTTCTCATGGTGAGTT TTTGTGTGTAGAAAACCAAAGGGGTCATCATGTGTTTGCGCAAGATTGGA GGAAGAGAAATTTGAGCTTGTATAGTAATCCATTGCATTTTCATGAAATT AAAGATAAGCTTGAAGAGAGTGAAGGGGATGGACTAGATTTGGAGCTGAG GCTTGGTCATCATCATCCATAG
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Coding sequence (CDS) from alignment at CcLG03_v2.0:42579415..42579936+

>drCajCajn.Asha.2.0.Cc_v2.0_07575.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_07575.1; Name=Cc_v2.0_07575.1; organism=Cajanus cajan; type=CDS; length=522bp; location=Sequence derived from: CcLG03_v2.0:42579415..42579936+ (Cajanus cajan
ATGGACCTAAACTACCCAGAAGAGAGCTACTCCAAGAGCTCCAGTGAAGA
AACTGATGATCCATCATCTGAGCAGAACAATGATGAGACGATAGGAACTG
GTAGATCCTACGAGTGCATCTTTTGCAAGAGAGGCTTCACCACAGCACAA
GCCTTAGGTGGACACATGAACATACACAGAAAAGAAAGAGCCAACAACAA
GAACAAACCCGTTTCAATATTCCCTAATTCTCCTCCTTCGAGTTCAAACA
AAGTTGATGGCAACAACAACTATGCAGATCTCGGATTCTTCTCACAATTT
CCAAGCCATTCCAGTACTGCACCAAGTATTAAACCTTCTCATGGTGAGTT
TTTGTGTGTAGAAAACCAAAGGGGTCATCATGTGTTTGCGCAAGATTGGA
GGAAGAGAAATTTGAGCTTGTATAGTAATCCATTGCATTTTCATGAAATT
AAAGATAAGCTTGAAGAGAGTGAAGGGGATGGACTAGATTTGGAGCTGAG
GCTTGGTCATCATCATCCATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR052426Plant_dev_regulator
IPR036236Znf_C2H2_sf