Cc_v2.0_07494.1

Transcript Overview


Name	Cc_v2.0_07494.1
Unique Name	drCajCajn.Asha.2.0.Cc_v2.0_07494.1
Type	mRNA
Organism	Cajanus cajan (pigeon pea)
Sequence length	567

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
CcLG03_v2.0	chromosome	CcLG03_v2.0:41360108..41362990 -	Cajanus cajan cv. Asha genome v2.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Cajanus cajan cv. Asha genome v2.0	2024-06-26
Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL	2024-07-30
InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0	2024-07-30
Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot	2024-07-30
Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11	2024-07-30

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
avjccaL367	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjccaL450	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anccaL0822	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
carccaL177	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
carccaL281	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
ccccaL0340	Cajanus cajan Asha genome v1.0	Cajanus cajan
ccccaL0616	Cajanus cajan Asha genome v1.0	Cajanus cajan

Orthologs


Gene/Transcript	Assembly	Species
Va03G068700.1	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
Va02G042080.1	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
evm.Ca_v2.0_08603	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
evm.Ca_v2.0_07441	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
rna-TanjilR_24607	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
rna-KK1_035350	Cajanus cajan Asha genome v1.0	Cajanus cajan
rna-KK1_001782	Cajanus cajan Asha genome v1.0	Cajanus cajan

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Cc_v2.0_07494	drCajCajn.Asha.2.0.Cc_v2.0_07494	Cajanus cajan	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Cc_v2.0_07494.1.exon5	drCajCajn.Asha.2.0.Cc_v2.0_07494.1.exon5	Cajanus cajan	exon
Cc_v2.0_07494.1.exon4	drCajCajn.Asha.2.0.Cc_v2.0_07494.1.exon4	Cajanus cajan	exon
Cc_v2.0_07494.1.exon3	drCajCajn.Asha.2.0.Cc_v2.0_07494.1.exon3	Cajanus cajan	exon
Cc_v2.0_07494.1.exon2	drCajCajn.Asha.2.0.Cc_v2.0_07494.1.exon2	Cajanus cajan	exon
Cc_v2.0_07494.1.exon1	drCajCajn.Asha.2.0.Cc_v2.0_07494.1.exon1	Cajanus cajan	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Cc_v2.0_07494.1.utr3p1	drCajCajn.Asha.2.0.Cc_v2.0_07494.1.utr3p1	Cajanus cajan	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
cds.Cc_v2.0_07494.1	drCajCajn.Asha.2.0.cds.Cc_v2.0_07494.1	Cajanus cajan	CDS
cds.Cc_v2.0_07494.1	drCajCajn.Asha.2.0.cds.Cc_v2.0_07494.1_2	Cajanus cajan	CDS
cds.Cc_v2.0_07494.1	drCajCajn.Asha.2.0.cds.Cc_v2.0_07494.1_3	Cajanus cajan	CDS
cds.Cc_v2.0_07494.1	drCajCajn.Asha.2.0.cds.Cc_v2.0_07494.1_4	Cajanus cajan	CDS
cds.Cc_v2.0_07494.1	drCajCajn.Asha.2.0.cds.Cc_v2.0_07494.1_5	Cajanus cajan	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Cc_v2.0_07494.1.utr5p1	drCajCajn.Asha.2.0.Cc_v2.0_07494.1.utr5p1	Cajanus cajan	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
drCajCajn.Asha.2.0.Cc_v2.0_07494.1	drCajCajn.Asha.2.0.Cc_v2.0_07494.1	Cajanus cajan	polypeptide
drCajCajn.Asha.2.0.Cc_v2.0_07494.1	drCajCajn.Asha.2.0.Cc_v2.0_07494.1-protein	Cajanus cajan	polypeptide

Homology

[Close]

BLAST of Cc_v2.0_07494.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151RKY4|A0A151RKY4_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_035350 PE=4 SV=1)

HSP 1 Score: 391.349 bits (1004), Expect = 1.324e-137
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0

Query:    1 MASLHRDDAEVAFEEGMLCLPSHVLDEACDHSKNHHQRQKQQGYHRDPQFQYSKSIPWARSSSYQRSKHATGGPGMQAVFLVSGQGSCGTGVFLPQKAATKSTRKPACAPVLLPARVVQALNLKVHQLGLQISPSQGPKCSPRRGEEAYSGESEKKKNDEKDGMKQCSVISQSQSSSAEIFLPKEWTY 188
            MASLHRDDAEVAFEEGMLCLPSHVLDEACDHSKNHHQRQKQQGYHRDPQFQYSKSIPWARSSSYQRSKHATGGPGMQAVFLVSGQGSCGTGVFLPQKAATKSTRKPACAPVLLPARVVQALNLKVHQLGLQISPSQGPKCSPRRGEEAYSGESEKKKNDEKDGMKQCSVISQSQSSSAEIFLPKEWTY
Sbjct:    1 MASLHRDDAEVAFEEGMLCLPSHVLDEACDHSKNHHQRQKQQGYHRDPQFQYSKSIPWARSSSYQRSKHATGGPGMQAVFLVSGQGSCGTGVFLPQKAATKSTRKPACAPVLLPARVVQALNLKVHQLGLQISPSQGPKCSPRRGEEAYSGESEKKKNDEKDGMKQCSVISQSQSSSAEIFLPKEWTY 188

[Close]

BLAST of Cc_v2.0_07494.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3RXV4|A0A0S3RXV4_PHAAN (DUF4005 domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G298200 PE=4 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 3.215e-88
Identity = 143/193 (74.09%), Postives = 153/193 (79.27%), Query Frame = 0

Query:    1 MASLHRDDAEVAFEEGMLCLPSHVLDEACDHS----KNHHQRQKQQGYHRDPQFQYSKSIPWARSSSYQRSKHATGGPGMQAVFLVSGQGSCG-TGVFLPQKAATKSTRKPACAPVLLPARVVQALNLKVHQLGLQISPSQGPKCSPRRGEEAYSGESEKKKNDEKDGMKQCSVISQSQSSSAEIFLPKEWTY 188
            MASLH DD EV FEEG L LPS+VLDEACD S    K  HQ+ +Q GYHR  +   S+   +   SSYQR KHATGGPGMQAVFLVSGQGSCG TGVFLPQKA TKSTRKPACAPVLLPARVVQALNLKVHQLG+QISPSQGPK   R G + Y  ES KKKN EK+GMKQCSVISQSQS S +IFLPKEWTY
Sbjct:    1 MASLH-DDGEVGFEEGKLLLPSNVLDEACDSSNKIHKRSHQKYQQPGYHRYQRETQSQRSKFTARSSYQRPKHATGGPGMQAVFLVSGQGSCGGTGVFLPQKAGTKSTRKPACAPVLLPARVVQALNLKVHQLGMQISPSQGPKYGERNG-QVYRSESTKKKNYEKEGMKQCSVISQSQSCSPDIFLPKEWTY 191

[Close]

BLAST of Cc_v2.0_07494.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9TI15|A0A0L9TI15_PHAAN (DUF4005 domain-containing protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0050520 PE=4 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 3.215e-88
Identity = 143/193 (74.09%), Postives = 153/193 (79.27%), Query Frame = 0

Query:    1 MASLHRDDAEVAFEEGMLCLPSHVLDEACDHS----KNHHQRQKQQGYHRDPQFQYSKSIPWARSSSYQRSKHATGGPGMQAVFLVSGQGSCG-TGVFLPQKAATKSTRKPACAPVLLPARVVQALNLKVHQLGLQISPSQGPKCSPRRGEEAYSGESEKKKNDEKDGMKQCSVISQSQSSSAEIFLPKEWTY 188
            MASLH DD EV FEEG L LPS+VLDEACD S    K  HQ+ +Q GYHR  +   S+   +   SSYQR KHATGGPGMQAVFLVSGQGSCG TGVFLPQKA TKSTRKPACAPVLLPARVVQALNLKVHQLG+QISPSQGPK   R G + Y  ES KKKN EK+GMKQCSVISQSQS S +IFLPKEWTY
Sbjct:    1 MASLH-DDGEVGFEEGKLLLPSNVLDEACDSSNKIHKRSHQKYQQPGYHRYQRETQSQRSKFTARSSYQRPKHATGGPGMQAVFLVSGQGSCGGTGVFLPQKAGTKSTRKPACAPVLLPARVVQALNLKVHQLGMQISPSQGPKYGERNG-QVYRSESTKKKNYEKEGMKQCSVISQSQSCSPDIFLPKEWTY 191

[Close]

BLAST of Cc_v2.0_07494.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7CWB1|V7CWB1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G150600g PE=4 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 2.185e-86
Identity = 144/197 (73.10%), Postives = 156/197 (79.19%), Query Frame = 0

Query:    1 MASLHRDDAEVAFEEGMLCLPSHVLDEACD-----HSKNH--HQRQKQQGYHRDPQFQYSKSIPWARSSSYQRSKHATGGPGMQAVFLVSGQGSCG-TGVFLPQKAATKSTRKPACAPVLLPARVVQALNLKVHQLGLQISPSQGPKCSPRRGE-EAYSGESEKKKNDEKDGMKQCSVISQSQSSSAEIFLPKEWTY 188
            MASLH DD EV FEEG L LPS+VLDEACD     H+++H  HQR     Y R+ Q Q SK    +  S+YQR KHATGGPGMQAVFLVSGQGSCG TGVFLPQKA TKSTRKPACAPVLLPARVVQALNLKVHQLG+QISPSQGPKC  R+GE    S ES KKKN EK+GMK CSVISQSQ+SS +IFLPKEWTY
Sbjct:    1 MASLH-DDGEVGFEEGKLLLPSNVLDEACDSYNKIHTRSHQKHQRPGYYRYQRETQSQCSK---LSARSAYQRPKHATGGPGMQAVFLVSGQGSCGGTGVFLPQKAGTKSTRKPACAPVLLPARVVQALNLKVHQLGMQISPSQGPKCGQRKGEVYRRSSESTKKKNYEKEGMKHCSVISQSQTSSPDIFLPKEWTY 193

[Close]

BLAST of Cc_v2.0_07494.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6MA68|A0A4D6MA68_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g2351 PE=4 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 6.803e-85
Identity = 145/196 (73.98%), Postives = 155/196 (79.08%), Query Frame = 0

Query:    1 MASLHRDDAEVAFEEGMLCLPSHVLDEACDHSKNH-----HQRQKQQGYHR-DPQFQYSKSIPWARSSSYQRSKHATGGPGMQAVFLVSGQGSCG-TGVFLPQKAATKSTRKPACAPVLLPARVVQALNLKVHQLGLQISPSQGPKCSPRRGEEAYSGESEKKKNDEKDGMKQCSV-ISQSQSSSAEIFLPKEWTY 188
            MASLH DD EV FEEG L LPS+VLDEACD + N      HQ+ +Q  YHR   + Q  +S   ARSSSYQR KHATGGPGMQAVFLVSGQGSCG TGVFLPQKA TKSTRKPACAPVLLPARVVQALNLKVHQLG+QISPSQGPK   R G E Y  ES KKK+ EK+GMKQCSV ISQSQS S +IFLPKEWTY
Sbjct:   76 MASLH-DDGEVGFEEGKLLLPSNVLDEACDSNNNKIHKRSHQKHQQPSYHRYQRETQSQRSKFTARSSSYQRPKHATGGPGMQAVFLVSGQGSCGGTGVFLPQKAGTKSTRKPACAPVLLPARVVQALNLKVHQLGMQISPSQGPKYGQRNG-EVYRSESTKKKSYEKEGMKQCSVIISQSQSCSPDIFLPKEWTY 269

HSP 2 Score: 58.9214 bits (141), Expect = 7.838e-7
Identity = 31/51 (60.78%), Postives = 35/51 (68.63%), Query Frame = 0

Query:    1 MASLHRDDAEVAFEEGMLCLPSHVLDEACDHSKNH-----HQRQKQQGYHR 46
            MASLH DD EV FEEG L LPS+VLDEACD + N      HQ+ +Q  YHR
Sbjct:    1 MASLH-DDGEVGFEEGKLLLPSNVLDEACDSNNNKIHKRSHQKHQQPSYHR 50

[Close]

BLAST of Cc_v2.0_07494.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8LD15|A0A8B8LD15_ABRPR (Uncharacterized protein LOC113863707 OS=Abrus precatorius OX=3816 GN=LOC113863707 PE=4 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 5.608e-83
Identity = 138/197 (70.05%), Postives = 153/197 (77.66%), Query Frame = 0

Query:    1 MASLHRDDAEVAFEEGMLCLPSHVLDEACD---HSKNHHQRQK------QQGYHRDPQFQYSKSIPWARSSSYQRSKHATGGPGMQAVFLVSGQGSCGTGVFLPQKAATKSTRKPACAPVLLPARVVQALNLKVHQLGLQISPSQGPKCSPRRGEEAYSGESEKKKNDEKDGMKQCSVISQSQSSSAEIFLPKEWTY 188
            MA++H DD EV FEEGM  LPSHVLDEA D   + +N HQ+QK         +HR+P+ QY+K   +   S YQRSK ATGGPGMQA+FLVSGQGSCGTGVFLPQKA TKST KPACAPVLLPARVVQALNLKVHQLGLQISP Q PK SP  G E YS ES KKK D+K+ +KQC VISQSQ+SS EIFLPKEWTY
Sbjct:    1 MAAVHDDDGEVGFEEGMPWLPSHVLDEAFDFKVYMENSHQKQKQQQQQGNHRFHREPRSQYTK---FTTRSWYQRSKQATGGPGMQAIFLVSGQGSCGTGVFLPQKAGTKSTTKPACAPVLLPARVVQALNLKVHQLGLQISPPQVPKYSP--GHEQYSSESTKKKRDQKNTLKQCCVISQSQNSSPEIFLPKEWTY 192

[Close]

BLAST of Cc_v2.0_07494.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445FH23|A0A445FH23_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_051590 PE=4 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 8.869e-83
Identity = 142/191 (74.35%), Postives = 152/191 (79.58%), Query Frame = 0

Query:    1 MASLHRDDAEVAFEEGMLCLPSHVLDEACD---HSKNHHQRQKQQGYHRDPQFQYSKSIPWARSSSYQRSKHATGGPGMQAVFLVSGQGSCGTGVFLPQKAATKSTRKPACAPVLLPARVVQALNLKVHQLGLQISPSQGPKCSPRRGEEAYSGESEKKKNDEKDGMKQCSVISQSQSSSAEIFLPKEWTY 188
            MAS+H D AEV FEEGML LPSHVLDEACD   H +N HQ+Q+Q GYHR  +   S+       SS QR KHATGGPGMQAVFLVSGQGSCGTGVFLPQKA TKST KPACAPVLLPARVVQALNLKVHQLGLQISPSQ PK S R G  + S ES KKK D+KD + QCSV+SQSQSSS EIFLPKEWTY
Sbjct:    1 MASVHDDAAEVGFEEGMLWLPSHVLDEACDSKIHMRNRHQKQRQHGYHRYQRETQSQCSNLFTRSSCQRPKHATGGPGMQAVFLVSGQGSCGTGVFLPQKAGTKSTSKPACAPVLLPARVVQALNLKVHQLGLQISPSQAPKYSSRSGVVSTS-ESTKKKTDQKDALMQCSVVSQSQSSSPEIFLPKEWTY 190

[Close]

BLAST of Cc_v2.0_07494.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1N9H0|I1N9H0_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100781513 PE=4 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 8.869e-83
Identity = 142/191 (74.35%), Postives = 152/191 (79.58%), Query Frame = 0

Query:    1 MASLHRDDAEVAFEEGMLCLPSHVLDEACD---HSKNHHQRQKQQGYHRDPQFQYSKSIPWARSSSYQRSKHATGGPGMQAVFLVSGQGSCGTGVFLPQKAATKSTRKPACAPVLLPARVVQALNLKVHQLGLQISPSQGPKCSPRRGEEAYSGESEKKKNDEKDGMKQCSVISQSQSSSAEIFLPKEWTY 188
            MAS+H D AEV FEEGML LPSHVLDEACD   H +N HQ+Q+Q GYHR  +   S+       SS QR KHATGGPGMQAVFLVSGQGSCGTGVFLPQKA TKST KPACAPVLLPARVVQALNLKVHQLGLQISPSQ PK S R G  + S ES KKK D+KD + QCSV+SQSQSSS EIFLPKEWTY
Sbjct:    1 MASVHDDAAEVGFEEGMLWLPSHVLDEACDSKIHMRNRHQKQRQHGYHRYQRETQSQCSNLFTRSSCQRPKHATGGPGMQAVFLVSGQGSCGTGVFLPQKAGTKSTSKPACAPVLLPARVVQALNLKVHQLGLQISPSQAPKYSSRSGVVSTS-ESTKKKTDQKDALMQCSVVSQSQSSSPEIFLPKEWTY 190

[Close]

BLAST of Cc_v2.0_07494.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3TPK3|A0A1S3TPK3_VIGRR (Uncharacterized protein LOC106757526 OS=Vigna radiata var. radiata OX=3916 GN=LOC106757526 PE=4 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 3.548e-82
Identity = 137/193 (70.98%), Postives = 150/193 (77.72%), Query Frame = 0

Query:    1 MASLHRDDAEVAFEEGMLCLPSHVLDEACDHS----KNHHQRQKQQGYHRDPQFQYSKSIPWARSSSYQRSKHATGGPGMQAVFLVSGQGSCG-TGVFLPQKAATKSTRKPACAPVLLPARVVQALNLKVHQLGLQISPSQGPKCSPRRGEEAYSGESEKKKNDEKDGMKQCSVISQSQSSSAEIFLPKEWTY 188
            MASLH DD EV FEEG L LPS+VLDEACD S    K  HQ+ +Q GYHR  +   S+   +   SSYQR KHATGGPGMQAVFLVSGQGSCG TGVFLPQKA TKSTRKPACAPVLLPARVV+ALNLKVH+LG+QISPSQGPK   R+G E Y  ES      +K+GMKQCSVISQSQS S +IFLPKEWTY
Sbjct:    1 MASLH-DDGEVGFEEGKLLLPSNVLDEACDSSNKIHKRSHQKHQQPGYHRYQRETQSQRSKFTGRSSYQRPKHATGGPGMQAVFLVSGQGSCGGTGVFLPQKAGTKSTRKPACAPVLLPARVVEALNLKVHELGMQISPSQGPKYGERKG-EVYRSES------KKEGMKQCSVISQSQSCSPDIFLPKEWTY 185

[Close]

BLAST of Cc_v2.0_07494.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1JNT9|I1JNT9_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100796168 PE=4 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 1.413e-80
Identity = 137/195 (70.26%), Postives = 149/195 (76.41%), Query Frame = 0

Query:    1 MASLHRDDA-EVAFEEGMLCLPSHVLDEACD---HSKNHHQRQKQQ-GYHRDPQFQYSKSIPWARSSSYQRSKHATGGPGMQAVFLVSGQGSCGTGVFLPQKAATKSTRKPACAPVLLPARVVQALNLKVHQLGLQISPSQGPKCSPRRGEEAYSGESEKKKNDEKDGMKQCSVIS--QSQSSSAEIFLPKEWTY 188
            MAS+H   A E+ FEEG+  LPSHV+DEACD   H +N HQ+  Q   Y R+ Q QY       RSS  QR KHATGGPGMQAVFLVSGQGSCGTGVFLPQKA TKS RKPACAPVLLPARVVQALNLKVHQLGLQISPSQ PK SPR GE   S ES KKK ++KD +KQCSV+   +SQSSS EIFLPKEWTY
Sbjct:    1 MASVHDIAAHELGFEEGIFWLPSHVMDEACDSKIHMRNRHQKLLQHYRYPRETQSQYCSKFS-TRSSYDQRPKHATGGPGMQAVFLVSGQGSCGTGVFLPQKAGTKSIRKPACAPVLLPARVVQALNLKVHQLGLQISPSQAPKYSPRSGEVCTS-ESTKKKTNQKDALKQCSVVVSHESQSSSPEIFLPKEWTY 193

[Close]

BLAST of Cc_v2.0_07494.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:1262447-1263932 FORWARD LENGTH=182)

HSP 1 Score: 99.3673 bits (246), Expect = 2.998e-26
Identity = 67/180 (37.22%), Postives = 93/180 (51.67%), Query Frame = 0

Query:   23 HVL-DEACDHSKNHHQRQKQQGYHRDPQFQYSKSIPWARS------------SSYQRSKHATGGPGMQAVFLVS-GQGSCGTGVFLPQKAATKSTRKPACAPVLLPARVVQALNLKVHQLGLQISPSQGPKCSPRRGEEAYSGESEKKKNDEKDGMKQCSVISQSQSSSAEIFLPKEWTY 188
            HVL D   DHS  H +  K   +H + +F+   + P  ++            S++QRSK   G   MQA FLV+ G+ + GTGVFLP  A+   T+K AC+PVLLP RVVQALNL +H  G+ ISP   P+            E++ KK  E        + +++   S E  LP+EW Y
Sbjct:   18 HVLQDPLFDHSNKHQKYVKNHHHHGNGEFRRPGAPPLRQTFPLNYNTRQKHQSNWQRSK---GEDRMQAFFLVTPGRTTSGTGVFLPATASHPPTKKTACSPVLLPTRVVQALNLNIHNNGIHISPR--PEIR----------ENDSKKKSEMLATTPIKIEAENPIDSPEKLLPEEWIY 182

[Close]

BLAST of Cc_v2.0_07494.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:1262447-1263932 FORWARD LENGTH=184)

HSP 1 Score: 95.9005 bits (237), Expect = 8.137e-25
Identity = 70/183 (38.25%), Postives = 95/183 (51.91%), Query Frame = 0

Query:   23 HVL-DEACDHSKNHHQRQK---QQGYHRDPQFQYSKSIPWARS------------SSYQRSKHATGGPGMQAVFLVS-GQGSCGTGVFLPQKAATKSTRKPACAPVLLPARVVQALNLKVHQLGLQISPSQGPKCSPRRGEEAYSGESEKKKNDEKDGMKQCSVISQSQSSSAEIFLPKEWTY 188
            HVL D   DHS N HQ QK      +H + +F+   + P  ++            S++QRSK   G   MQA FLV+ G+ + GTGVFLP  A+   T+K AC+PVLLP RVVQALNL +H  G+ ISP   P+            E++ KK  E        + +++   S E  LP+EW Y
Sbjct:   18 HVLQDPLFDHS-NKHQLQKYVKNHHHHGNGEFRRPGAPPLRQTFPLNYNTRQKHQSNWQRSK---GEDRMQAFFLVTPGRTTSGTGVFLPATASHPPTKKTACSPVLLPTRVVQALNLNIHNNGIHISPR--PEIR----------ENDSKKKSEMLATTPIKIEAENPIDSPEKLLPEEWIY 184

[Close]

BLAST of Cc_v2.0_07494.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:1262447-1263753 FORWARD LENGTH=167)

HSP 1 Score: 85.1149 bits (209), Expect = 6.180e-21
Identity = 59/132 (44.70%), Postives = 76/132 (57.58%), Query Frame = 0

Query:   23 HVL-DEACDHSKNHHQRQK---QQGYHRDPQFQYSKSIPWARS------------SSYQRSKHATGGPGMQAVFLVS-GQGSCGTGVFLPQKAATKSTRKPACAPVLLPARVVQALNLKVHQLGLQISPSQG 137
            HVL D   DHS N HQ QK      +H + +F+   + P  ++            S++QRSK   G   MQA FLV+ G+ + GTGVFLP  A+   T+K AC+PVLLP RVVQALNL +H  G+ ISP  G
Sbjct:   18 HVLQDPLFDHS-NKHQLQKYVKNHHHHGNGEFRRPGAPPLRQTFPLNYNTRQKHQSNWQRSK---GEDRMQAFFLVTPGRTTSGTGVFLPATASHPPTKKTACSPVLLPTRVVQALNLNIHNNGIHISPRPG 145

The following BLAST results are available for this feature:

BLAST of Cc_v2.0_07494.1 vs. ExPASy TrEMBL (2024)
BLAST of Cc_v2.0_07494.1 vs. ExPASy TrEMBL (2024)
BLAST of Cc_v2.0_07494.1 vs. Araport11

BLAST of Cc_v2.0_07494.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
tr\|A0A151RKY4\|A0A151RKY4_CAJCA	1.324e-137	100.00	Uncharacterized protein OS=Cajanus cajan OX=3821 G...	[more]
tr\|A0A0S3RXV4\|A0A0S3RXV4_PHAAN	3.215e-88	74.09	DUF4005 domain-containing protein OS=Vigna angular...	[more]
tr\|A0A0L9TI15\|A0A0L9TI15_PHAAN	3.215e-88	74.09	DUF4005 domain-containing protein OS=Phaseolus ang...	[more]
tr\|V7CWB1\|V7CWB1_PHAVU	2.185e-86	73.10	Uncharacterized protein OS=Phaseolus vulgaris OX=3...	[more]
tr\|A0A4D6MA68\|A0A4D6MA68_VIGUN	6.803e-85	73.98	Uncharacterized protein OS=Vigna unguiculata OX=39...	[more]
tr\|A0A8B8LD15\|A0A8B8LD15_ABRPR	5.608e-83	70.05	Uncharacterized protein LOC113863707 OS=Abrus prec...	[more]
tr\|A0A445FH23\|A0A445FH23_GLYSO	8.869e-83	74.35	Uncharacterized protein OS=Glycine soja OX=3848 GN...	[more]
tr\|I1N9H0\|I1N9H0_SOYBN	8.869e-83	74.35	Uncharacterized protein OS=Glycine max OX=3847 GN=...	[more]
tr\|A0A1S3TPK3\|A0A1S3TPK3_VIGRR	3.548e-82	70.98	Uncharacterized protein LOC106757526 OS=Vigna radi...	[more]
tr\|I1JNT9\|I1JNT9_SOYBN	1.413e-80	70.26	Uncharacterized protein OS=Glycine max OX=3847 GN=...	[more]

BLAST of Cc_v2.0_07494.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot )
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Cc_v2.0_07494.1 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11)
Total hits: 3


Match Name	E-value	Identity	Description
\|	2.998e-26	37.22	Symbols: no symbol available \| no full name availa...	[more]
\|	8.137e-25	38.25	Symbols: no symbol available \| no full name availa...	[more]
\|	6.180e-21	44.70	Symbols: no symbol available \| no full name availa...	[more]

InterPro

Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33356	TIP41-LIKE PROTEIN	coord: 17..188

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at CcLG03_v2.0:41360108..41362990-
coding sequence from alignment at CcLG03_v2.0:41360108..41362990-

mRNA sequence

>drCajCajn.Asha.2.0.Cc_v2.0_07494.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_07494.1; Name=Cc_v2.0_07494.1; organism=Cajanus cajan; type=mRNA; length=567bp
ATGGCTTCTCTTCATCGAGATGATGCTGAAGTTGCTTTTGAAGAAGGAAT
GCTCTGTTTACCCTCCCATGTTCTTGACGAGGCATGTGATCACTCCAAGA
ACCACCACCAAAGACAGAAGCAACAAGGCTACCACAGGGACCCACAGTTT
CAGTACTCAAAATCTATTCCATGGGCAAGATCATCATCATATCAAAGGTC
GAAACATGCGACAGGTGGGCCTGGGATGCAAGCTGTTTTCTTAGTCTCTG
GGCAAGGATCATGTGGCACTGGAGTTTTCTTACCCCAAAAAGCAGCCACA
AAATCAACTAGGAAGCCAGCGTGCGCTCCTGTCCTCCTTCCAGCTCGAGT
TGTTCAAGCTCTAAATCTTAAAGTGCATCAATTAGGCCTGCAGATTTCAC
CTTCTCAAGGTCCCAAATGTAGCCCACGACGTGGAGAAGAAGCATACAGT
GGTGAGTCAGAGAAAAAGAAAAACGATGAGAAAGATGGGATGAAGCAATG
CAGTGTTATTAGTCAGAGTCAAAGCTCTTCTGCTGAGATATTTCTTCCAA
AGGAATGGACGTATTAG

protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_07494.1

>drCajCajn.Asha.2.0.Cc_v2.0_07494.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_07494.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_07494.1; organism=Cajanus cajan; type=polypeptide; length=188bp
MASLHRDDAEVAFEEGMLCLPSHVLDEACDHSKNHHQRQKQQGYHRDPQF
QYSKSIPWARSSSYQRSKHATGGPGMQAVFLVSGQGSCGTGVFLPQKAAT
KSTRKPACAPVLLPARVVQALNLKVHQLGLQISPSQGPKCSPRRGEEAYS
GESEKKKNDEKDGMKQCSVISQSQSSSAEIFLPKEWTY

mRNA from alignment at CcLG03_v2.0:41360108..41362990-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>drCajCajn.Asha.2.0.Cc_v2.0_07494.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_07494.1; Name=Cc_v2.0_07494.1; organism=Cajanus cajan; type=mRNA; length=2883bp; location=Sequence derived from: CcLG03_v2.0:41360108..41362990- (Cajanus cajan
TTTTTTTCTCCACTCCCCGACACGCAAGTTATTTTAGTTGAGTTGCAGGT
TGGAAGTTGGAGTTTAAAAACCCTCTCTCCCTCTTACATTCCAAAACGAG
TCACCAGATTCAACATCATACTATAATCTTTTCTCTGTTCCTCTCATGGC
TTCTCTTCATCGAGATGATGCTGAAGTTGCTTTTGAAGAAGGAATGCTCT
GTTTACCCTCCCATGTTCTTGACGAGGCATGTGATCACTCCAAGGTTAGT
TAATACTTAGTAACATAGTAATAACATCATATTTTTCCTTCTTTATTTAT
TCATGTCCATCATTTTGCTTCTTCTCATGTATATAGTTTCTCTAGCTAGG
TATTCCAAATATGCAACTGGGTCGCTTCATTATAATCAGAGATTAACATA
TAGTTGTGCTGATTAGTGTTATATTTTTTAAGTCATATGTTTGATTGAAT
TGATATAGTGCATGTGCATTTGGCTTCACAGATTGGATTTTCCTATTTTA
GGTAATTTGATTAATATTTAATAGTAACATAATCTACGGTAATTTGAGTT
TTGAATTGGTTTTACATGTTGGAATTTTCTACCGGTGAATATGAAGAACC
ACCACCAAAGACAGAAGCAACAAGGCTACCACAGGGACCCACAGTTTCAG
GTACTGTTCTCAGCATTTTATACATTCATTTGATCACTCTCTGCCTCTGG
TTAATTGTGGCTGCTGGAGAGACAGCAAGGTGCAATGTTTGCGTAGAAGT
TTTGGTAGGTATCATATAATAAAGGAATAGGTATCATATGATAAAGGAAT
AAAAGATATATCCTTTTAGTTAGGTTTAGGTAGTAATCAGGCTGTAGTTT
TAATAATATGTGCTTTAAAGATTTGAGATGTAGGTATTCCAAAGATGGGT
TAGGCACTTTAGATGCAACTGAAATTACTGATTAAAAATGGAATTGAAAT
AGCTTTATTTAATCAAGAATCGTCATCAGGTTCTGTACACGTGTCTGTCT
ATGAATTGAGTTAGCATCATATGTGGATTTTAATTAATTAACTACTTTTT
AATTAATCATATTATTAATTCAAAATATTTACTAGTTTTGTCATATAATT
AATTTTTGTAAAAGAAAATTGACCTGATTAATAAATTTTTAATTTTATTA
TTTTAAATCACAAAACTCAAATTGAGATCTTGTTTGTACTAACTACTTTT
GTTGTATTAATTGGCTACTTTAGCATAAGGAGATCATCAAGCTACTTTAG
GCGTTAGTGGGAACAGAAAATATGCTTTTACAGTTCCATTTCTTTTGCAC
ACAGATTTCTTTTGAAGCAAAAAGGGTCTTTAGTGTTGCATGCTGCAGAT
ATTCCAGGAATTTTACCTTTTTTTAAAGTTTTTTCCTTGTACTTTCGGTA
ACATTAATTATTCTTGAGCTGAAACCAAAAGGCCAAAAATAAAGGAGTTC
CTAATTTAATTGAATGGTTGATAACCTAATGGCGTGGCTCAAAATTCGTC
TCCCTCTAACATGACTCAAACAATAAAAAAGTAGGCTAACGTGCAAGCTG
AAAATTGTCTCAATCTAGCTTTAGTCTGATTTTATTTTAAAAATTGAAAA
GTTGCACGTAATATATTAAACAAACCTACTTAAGTAGATAGCTTTAGTGG
CTTATCAGAAAAGTTCTGAAGCATGCAGTATGAAACTAGACATGTCATGA
CGCATGCCTAGTTGGTCACATGCATGCATATTAATCCTGCAGGCTGCAGT
GACATATTAGTAGTTAATTGTTTATGACTTTGAACTTTATTTGTGAAATA
GTCATACCTGCTTATTCACCATTTCATATATCCAATTTTTTGTTTTATTA
AAATTAAAATACATATTGTGATTAATTTCAGTACTCAAAATCTATTCCAT
GGGCAAGATCATCATCATATCAAAGGTCGAAACATGCGACAGGTGGGCCT
GGGATGCAAGCTGTTTTCTTAGTCTCTGGGCAAGGATCATGTGGCACTGG
AGTTTTCTTACCCCAAAAAGCAGCCACAAAATCAACTAGGAAGCCAGGTT
TACACCTTGTATTAATTTCTTTCCTCGCAATGAGGTGTATCACTTTTTCA
TTATAAAAAAGAATGTGCTATATATAAATCTTTTTGATGCAAGTAGAAGT
GCTTTTTGAGATATTCTTAACTAAATATAAAGAGTTATTTTAGCAGAGAA
ACTGTGAAAAACATTTATAAGTTTGTATAACCCTTTCAAATTTTCCTTAC
ATATGTTGCTAGCTGTAGCTTATATGATTAACAATGTTTTGCAGCGTGCG
CTCCTGTCCTCCTTCCAGCTCGAGTTGTTCAAGCTCTAAATCTTAAAGTG
CATCAATTAGGCCTGCAGATTTCACCTTCTCAAGGTCTCCTATTTAAGAA
ATAATGTGCTACTATATTATATCATATTAAAATATTTAAATTACATATGT
GCATACCCTACATATATAAAAGGAAAGTTGGATGATCTTATTATTGCAGG
TCCCAAATGTAGCCCACGACGTGGAGAAGAAGCATACAGTGGTGAGTCAG
AGAAAAAGAAAAACGATGAGAAAGATGGGATGAAGCAATGCAGTGTTATT
AGTCAGAGTCAAAGCTCTTCTGCTGAGATATTTCTTCCAAAGGAATGGAC
GTATTAGCTTGCTAACTTGTGTGTCTCCTTAGAAGAAAACAAAAAAGGAA
CTAGCGCGGGAATATCAAGTGTATATGCATGTAGTAAGTTAGCTAGAGAT
AATTTCATCATAAAAGCCGGTTGTTAAATTATTTGTGCTGATGGACCCTG
ACCATGTAATTTTATTAAATAAATAAAAGCACTAAAGTTCCGGTTCTATA
TATTGCACACTCCGATGTATATATACACGGGAA

Coding sequence (CDS) from alignment at CcLG03_v2.0:41360108..41362990-

>drCajCajn.Asha.2.0.Cc_v2.0_07494.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_07494.1; Name=Cc_v2.0_07494.1; organism=Cajanus cajan; type=CDS; length=567bp; location=Sequence derived from: CcLG03_v2.0:41360108..41362990- (Cajanus cajan
ATGGCTTCTCTTCATCGAGATGATGCTGAAGTTGCTTTTGAAGAAGGAAT
GCTCTGTTTACCCTCCCATGTTCTTGACGAGGCATGTGATCACTCCAAGA
ACCACCACCAAAGACAGAAGCAACAAGGCTACCACAGGGACCCACAGTTT
CAGTACTCAAAATCTATTCCATGGGCAAGATCATCATCATATCAAAGGTC
GAAACATGCGACAGGTGGGCCTGGGATGCAAGCTGTTTTCTTAGTCTCTG
GGCAAGGATCATGTGGCACTGGAGTTTTCTTACCCCAAAAAGCAGCCACA
AAATCAACTAGGAAGCCAGCGTGCGCTCCTGTCCTCCTTCCAGCTCGAGT
TGTTCAAGCTCTAAATCTTAAAGTGCATCAATTAGGCCTGCAGATTTCAC
CTTCTCAAGGTCCCAAATGTAGCCCACGACGTGGAGAAGAAGCATACAGT
GGTGAGTCAGAGAAAAAGAAAAACGATGAGAAAGATGGGATGAAGCAATG
CAGTGTTATTAGTCAGAGTCAAAGCTCTTCTGCTGAGATATTTCTTCCAA
AGGAATGGACGTATTAG

Search form

Cc_v2.0_07494.1