Cc_v2.0_25311.1

Transcript Overview
NameCc_v2.0_25311.1
Unique NamedrCajCajn.Asha.2.0.Cc_v2.0_25311.1
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length837
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CcLG11_v2.0chromosomeCcLG11_v2.0:1813133..1816892 -Cajanus cajan cv. Asha genome v2.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
anccaL0024Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0029Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0030Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0202Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL170Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjccaL228Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0702Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL616Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0867Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0921Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL1140Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carccaL018Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccapsR212Pisum sativum Cameor genome v1aPisum sativum
ccapsR217Pisum sativum Cameor genome v1aPisum sativum
ccavrvR123Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccapvR157Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavrvR158Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavrvR166Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavfhR152Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccavrvR188Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccapvR204Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccapvR217Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavfhR179Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccavfhR187Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccavssR147Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavssR166Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavssR201Vicia sativa cv. Studenica genome v1.0Vicia sativa
carccaL453Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
carccaL557Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccavuR113Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR150Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavumR162Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR140Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavuR150Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccccaL0544Cajanus cajan Asha genome v1.0Cajanus cajan
ccccaL0558Cajanus cajan Asha genome v1.0Cajanus cajan
ccavumR221Vigna umbellata FF25 genome v1.0Vigna umbellata
ccccaL0575Cajanus cajan Asha genome v1.0Cajanus cajan
ccavunR106Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR158Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccavunR128Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccavunR135Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR199Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccapvfR213Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Vigun10g191100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun10g191100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-XM_014660225.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vfaba.Hedin2.R1.2g266960.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Va11G001170.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
evm.Ca_v2.0_17849Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Psat7g257120.1Pisum sativum Cameor genome v1aPisum sativum
Vum_09G01511.1Vigna umbellata FF25 genome v1.0Vigna umbellata
jg57447.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Phvul.010G156300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
PvulFLAVERTChr10.1699Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-TanjilR_20341Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-KK1_000227Cajanus cajan Asha genome v1.0Cajanus cajan
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Cc_v2.0_25311drCajCajn.Asha.2.0.Cc_v2.0_25311Cajanus cajangene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_25311.1.exon8drCajCajn.Asha.2.0.Cc_v2.0_25311.1.exon8Cajanus cajanexon
Cc_v2.0_25311.1.exon7drCajCajn.Asha.2.0.Cc_v2.0_25311.1.exon7Cajanus cajanexon
Cc_v2.0_25311.1.exon6drCajCajn.Asha.2.0.Cc_v2.0_25311.1.exon6Cajanus cajanexon
Cc_v2.0_25311.1.exon5drCajCajn.Asha.2.0.Cc_v2.0_25311.1.exon5Cajanus cajanexon
Cc_v2.0_25311.1.exon4drCajCajn.Asha.2.0.Cc_v2.0_25311.1.exon4Cajanus cajanexon
Cc_v2.0_25311.1.exon3drCajCajn.Asha.2.0.Cc_v2.0_25311.1.exon3Cajanus cajanexon
Cc_v2.0_25311.1.exon2drCajCajn.Asha.2.0.Cc_v2.0_25311.1.exon2Cajanus cajanexon
Cc_v2.0_25311.1.exon1drCajCajn.Asha.2.0.Cc_v2.0_25311.1.exon1Cajanus cajanexon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_25311.1.utr3p1drCajCajn.Asha.2.0.Cc_v2.0_25311.1.utr3p1Cajanus cajanthree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.Cc_v2.0_25311.1drCajCajn.Asha.2.0.cds.Cc_v2.0_25311.1Cajanus cajanCDS
cds.Cc_v2.0_25311.1drCajCajn.Asha.2.0.cds.Cc_v2.0_25311.1_2Cajanus cajanCDS
cds.Cc_v2.0_25311.1drCajCajn.Asha.2.0.cds.Cc_v2.0_25311.1_3Cajanus cajanCDS
cds.Cc_v2.0_25311.1drCajCajn.Asha.2.0.cds.Cc_v2.0_25311.1_4Cajanus cajanCDS
cds.Cc_v2.0_25311.1drCajCajn.Asha.2.0.cds.Cc_v2.0_25311.1_5Cajanus cajanCDS
cds.Cc_v2.0_25311.1drCajCajn.Asha.2.0.cds.Cc_v2.0_25311.1_6Cajanus cajanCDS
cds.Cc_v2.0_25311.1drCajCajn.Asha.2.0.cds.Cc_v2.0_25311.1_7Cajanus cajanCDS
cds.Cc_v2.0_25311.1drCajCajn.Asha.2.0.cds.Cc_v2.0_25311.1_8Cajanus cajanCDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_25311.1.utr5p1drCajCajn.Asha.2.0.Cc_v2.0_25311.1.utr5p1Cajanus cajanfive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drCajCajn.Asha.2.0.Cc_v2.0_25311.1drCajCajn.Asha.2.0.Cc_v2.0_25311.1Cajanus cajanpolypeptide
drCajCajn.Asha.2.0.Cc_v2.0_25311.1drCajCajn.Asha.2.0.Cc_v2.0_25311.1-proteinCajanus cajanpolypeptide


Homology
[Close]
BLAST of Cc_v2.0_25311.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151SGV1|A0A151SGV1_CAJCA (Post-illumination chlorophyll fluorescence increase OS=Cajanus cajan OX=3821 GN=KK1_000227 PE=4 SV=1)

HSP 1 Score: 578.556 bits (1490), Expect = 0.000e+0
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0 
Query:    1 MAATNASIFASSTQPCLPVPPSISNTLASPFLNVSLPRCYLDKKRHVKFSQKISAAAVATTTTTNEEIQEYKLPSWAVFEIGRAPVYWKTMNGLPPTSGEKLKLFYNPDAAQLAPSEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADAPIYTIQICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPKPFQNKAIDFFNKGLAEELSKEGACEKAIFPDTTKVITRCAMIGNLSKEGGDRCELNLVPGCTDPSSHLYNPLANVDDGTCPIDLDSESEE 278
            MAATNASIFASSTQPCLPVPPSISNTLASPFLNVSLPRCYLDKKRHVKFSQKISAAAVATTTTTNEEIQEYKLPSWAVFEIGRAPVYWKTMNGLPPTSGEKLKLFYNPDAAQLAPSEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADAPIYTIQICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPKPFQNKAIDFFNKGLAEELSKEGACEKAIFPDTTKVITRCAMIGNLSKEGGDRCELNLVPGCTDPSSHLYNPLANVDDGTCPIDLDSESEE
Sbjct:    1 MAATNASIFASSTQPCLPVPPSISNTLASPFLNVSLPRCYLDKKRHVKFSQKISAAAVATTTTTNEEIQEYKLPSWAVFEIGRAPVYWKTMNGLPPTSGEKLKLFYNPDAAQLAPSEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADAPIYTIQICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPKPFQNKAIDFFNKGLAEELSKEGACEKAIFPDTTKVITRCAMIGNLSKEGGDRCELNLVPGCTDPSSHLYNPLANVDDGTCPIDLDSESEE 278
[Close]
BLAST of Cc_v2.0_25311.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8KPE2|A0A8B8KPE2_ABRPR (Uncharacterized protein LOC113857072 OS=Abrus precatorius OX=3816 GN=LOC113857072 PE=4 SV=1)

HSP 1 Score: 494.967 bits (1273), Expect = 9.893e-176
Identity = 239/278 (85.97%), Postives = 258/278 (92.81%), Query Frame = 0 
Query:    1 MAATNASIFASSTQPCLPVPPSISNTLASPFLNVSLPRCYLDKKRHVKFSQKISAAAVATTTTTNEEIQEYKLPSWAVFEIGRAPVYWKTMNGLPPTSGEKLKLFYNPDAAQLAPSEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADAPIYTIQICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPKPFQNKAIDFFNKGLAEELSKEGACEKAIFPDTTKVITRCAMIGNLSKEGGDRCELNLVPGCTDPSSHLYNPLANVDDGTCPIDLDSESEE 278
            MA TN  IFASSTQPCLP+P SISNTLA+PFLNVSLPRCYL K+R VKFSQKISAAAVAT+ T  EEIQEYKLPSWA FEIGR+ VYWKTMNGLPPTSGE LKLFYNP A QLAPSEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKAD+PIYTIQICIPKHA+NLIFSFTNGV+WDGPYRLQF+VPK  +NK IDFFNKGLA+ELSKEGACEKAIFPDT +VITRCAMIGNLSKEGGDRC+LNLV GCTDPSSH+Y+PLANVDDG+C I+L+SESE+
Sbjct:    1 MATTN--IFASSTQPCLPMPRSISNTLATPFLNVSLPRCYLVKERRVKFSQKISAAAVATSPT--EEIQEYKLPSWASFEIGRSAVYWKTMNGLPPTSGETLKLFYNPAATQLAPSEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADSPIYTIQICIPKHALNLIFSFTNGVEWDGPYRLQFKVPKALENKPIDFFNKGLADELSKEGACEKAIFPDTHRVITRCAMIGNLSKEGGDRCDLNLVVGCTDPSSHMYDPLANVDDGSCIIELESESED 274
[Close]
BLAST of Cc_v2.0_25311.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6MN61|A0A4D6MN61_VIGUN (Post-illumination chlorophyll fluorescence increase OS=Vigna unguiculata OX=3917 GN=DEO72_LG8g132 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 3.390e-174
Identity = 236/277 (85.20%), Postives = 253/277 (91.34%), Query Frame = 0 
Query:    2 AATNASIFASSTQPCLPVPPSISNTLASPFLNVSLPRCYLDKKRHVKFSQKISAAAVATTTTTNEEIQEYKLPSWAVFEIGRAPVYWKTMNGLPPTSGEKLKLFYNPDAAQLAPSEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADAPIYTIQICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPKPFQNKAIDFFNKGLAEELSKEGACEKAIFPDTTKVITRCAMIGNLSKEGGDRCELNLVPGCTDPSSHLYNPLANVDDGTCPIDLDSESEE 278
            AATNAS+F+S TQPC  VPP+ISNTL+SPFLNVSLP+ Y  KK HVK S+KISAAAVAT T T EEIQEYKLPSWA FEIGRAPVYWKTMNGLPPTSGEKLKL YNP A QL PSEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADAPIYTIQICIPKHA+NLIFSFTNGVDWDGPYRLQF+VPK  +NK I+FFN+GLA+ELSKEGACE+AIFPDT  VI  CAMIGNL+KEGGDRC+LNLV GCTDPSSHLYNPLANVDDGTCPI+LDSESE+
Sbjct:    3 AATNASMFSSPTQPC-SVPPTISNTLSSPFLNVSLPKSYPVKKNHVKISRKISAAAVATPTPTTEEIQEYKLPSWAQFEIGRAPVYWKTMNGLPPTSGEKLKLLYNPAATQLVPSEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADAPIYTIQICIPKHALNLIFSFTNGVDWDGPYRLQFEVPKALKNKPIEFFNRGLADELSKEGACEQAIFPDTNTVIASCAMIGNLTKEGGDRCDLNLVLGCTDPSSHLYNPLANVDDGTCPIELDSESED 278
[Close]
BLAST of Cc_v2.0_25311.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7AT30|V7AT30_PHAVU (Post-illumination chlorophyll fluorescence increase OS=Phaseolus vulgaris OX=3885 GN=PHAVU_010G156300g PE=4 SV=1)

HSP 1 Score: 490.345 bits (1261), Expect = 9.399e-174
Identity = 240/278 (86.33%), Postives = 260/278 (93.53%), Query Frame = 0 
Query:    1 MAATNASIFASSTQPCLPVPPSISNTLASPFLNVSLPRCYLDKKRHVKFSQKISAAAVATTTTTNEEIQEYKLPSWAVFEIGRAPVYWKTMNGLPPTSGEKLKLFYNPDAAQLAPSEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADAPIYTIQICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPKPFQNKAIDFFNKGLAEELSKEGACEKAIFPDTTKVITRCAMIGNLSKEGGDRCELNLVPGCTDPSSHLYNPLANVDDGTCPIDLDSESEE 278
            MAATNASIFAS TQPCLPVPP+ISNTL+SPFLNVSLP+ Y  K++H+K S+KISAAAVAT TTT E+IQEYKLPSWA FEIGRAPVYWKTMNGLPPTSGEK+KL YNP A QL PSEEFGIAFNGGFNQPIMCGGEPRAMLRK+RGKADAPIYTIQICIPKHA+NLIFSFTNGVDWDGPYRLQF+VPK  +NK I+FFN+GLA+ELSKEGACEKAIFPDT  V++RCAMIGNLSKEGGDRC+LNLV GCTDPSSHLYNPLANVDDGTCPIDLDSESE+
Sbjct:    1 MAATNASIFASPTQPCLPVPPTISNTLSSPFLNVSLPKSYPVKQKHMKVSKKISAAAVATPTTTTEKIQEYKLPSWAQFEIGRAPVYWKTMNGLPPTSGEKVKLLYNPAATQLVPSEEFGIAFNGGFNQPIMCGGEPRAMLRKNRGKADAPIYTIQICIPKHALNLIFSFTNGVDWDGPYRLQFEVPKALKNKPIEFFNRGLADELSKEGACEKAIFPDTNTVVSRCAMIGNLSKEGGDRCDLNLVLGCTDPSSHLYNPLANVDDGTCPIDLDSESED 278
[Close]
BLAST of Cc_v2.0_25311.1 vs. ExPASy TrEMBL (2024)
Match: tr|C6TDB8|C6TDB8_SOYBN (Post-illumination chlorophyll fluorescence increase OS=Glycine max OX=3847 GN=100790141 PE=2 SV=1)

HSP 1 Score: 489.574 bits (1259), Expect = 1.931e-173
Identity = 246/278 (88.49%), Postives = 257/278 (92.45%), Query Frame = 0 
Query:    1 MAATNASIFASSTQPCLPVPPSISNTLASPFLNVSLPRCYLDKKRHVKFSQKISAAAVATTTTTNEEIQEYKLPSWAVFEIGRAPVYWKTMNGLPPTSGEKLKLFYNPDAAQLAPSEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADAPIYTIQICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPKPFQNKAIDFFNKGLAEELSKEGACEKAIFPDTTKVITRCAMIGNLSKEGGDRCELNLVPGCTDPSSHLYNPLANVDDGTCPIDLDSESEE 278
            MAATNASIFASSTQ CLPV P+ISNTL SPFLNVS PR YL KK+HVKFS+ ISAAAVATTTTT EEIQEYKLPSWA FEIGRA VYWKTMNGLPP+SGEKLKLFYNP A QL P+EEFGIAFNGGFNQPIMCGGEPRAMLRK RGKADAPIY+IQICIPKHA+NLIFSFTNGVDWDGPYRLQFQVPK  QNK IDFFNKGLAEELSKEGACE+AIFPDT KVIT+CAMIGNLSKEGGDRC+LN V GCTDPSSHLYNPLANVDDGTC I+LDSESEE
Sbjct:    1 MAATNASIFASSTQSCLPVSPTISNTLVSPFLNVSSPRSYLVKKKHVKFSKHISAAAVATTTTT-EEIQEYKLPSWAKFEIGRAAVYWKTMNGLPPSSGEKLKLFYNPAATQLVPNEEFGIAFNGGFNQPIMCGGEPRAMLRKYRGKADAPIYSIQICIPKHALNLIFSFTNGVDWDGPYRLQFQVPKALQNKPIDFFNKGLAEELSKEGACEQAIFPDTNKVITKCAMIGNLSKEGGDRCDLNFVVGCTDPSSHLYNPLANVDDGTCTIELDSESEE 277
[Close]
BLAST of Cc_v2.0_25311.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371FPA3|A0A371FPA3_MUCPR (Post-illumination chlorophyll fluorescence increase OS=Mucuna pruriens OX=157652 GN=CR513_39335 PE=4 SV=1)

HSP 1 Score: 486.878 bits (1252), Expect = 2.195e-172
Identity = 237/278 (85.25%), Postives = 253/278 (91.01%), Query Frame = 0 
Query:    1 MAATNASIFASSTQPCLPVPPSISNTLASPFLNVSLPRCYLDKKRHVKFSQKISAAAVATTTTTNEEIQEYKLPSWAVFEIGRAPVYWKTMNGLPPTSGEKLKLFYNPDAAQLAPSEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADAPIYTIQICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPKPFQNKAIDFFNKGLAEELSKEGACEKAIFPDTTKVITRCAMIGNLSKEGGDRCELNLVPGCTDPSSHLYNPLANVDDGTCPIDLDSESEE 278
            MAATNASIFASSTQPCLPVPPSISNTLA PFL  S  R YL KKRHVKFSQKI AAAVA T+TT EEIQEYKLPSWA FE+GRA VYWKTMNGLPPTSGEKLKLFYNP A QLAP+EEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADA +Y+IQICIPKHA+NLIFSFTNGVDWDGPYRLQF++PK  Q+K IDFFN GLAEELSKEGAC++AIFPDT KVITRCAMIGNLSKEGGDRC+LN V GCTDP+S LYNPLANVDDG C ++LDSESE+
Sbjct:    1 MAATNASIFASSTQPCLPVPPSISNTLAGPFLKFSSRRSYLVKKRHVKFSQKIRAAAVAITSTT-EEIQEYKLPSWAQFEMGRAAVYWKTMNGLPPTSGEKLKLFYNPAATQLAPNEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADASLYSIQICIPKHALNLIFSFTNGVDWDGPYRLQFELPKNLQSKPIDFFNVGLAEELSKEGACDEAIFPDTNKVITRCAMIGNLSKEGGDRCDLNFVVGCTDPTSPLYNPLANVDDG-CMVELDSESED 276
[Close]
BLAST of Cc_v2.0_25311.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445JRF8|A0A445JRF8_GLYSO (Post-illumination chlorophyll fluorescence increase OS=Glycine soja OX=3848 GN=D0Y65_016732 PE=4 SV=1)

HSP 1 Score: 484.952 bits (1247), Expect = 9.300e-172
Identity = 243/273 (89.01%), Postives = 255/273 (93.41%), Query Frame = 0 
Query:    1 MAATNASIFASSTQPCLPVPPSISNTLASPFLNVSLPRCYLDKKRHVKFSQKISAAAVATTTTTNEEIQEYKLPSWAVFEIGRAPVYWKTMNGLPPTSGEKLKLFYNPDAAQLAPSEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADAPIYTIQICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPKPFQNKAIDFFNKGLAEELSKEGACEKAIFPDTTKVITRCAMIGNLSKEGGDRCELNLVPGCTDPSSHLYNPLANVDDGTCPIDLD 273
            MAATNASIFASSTQPCLPVPP+I NTLA+PFLNVS PR YL K +HVKFS+KISAAAVATTTTT EEIQEYKLPSWA FEIGRA VYWKTMNGLPPTSGEKLKLFYNP A QL P+EEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADAPIY+IQICIPKHA+NLIFSFTNGVDWDGPYRLQFQVPK  QNK IDFFNKGLAEELSKEGACE+AIFPDT K+IT+CAMIGNLSKEGGDRC+LN V GCTDPSSHLYNPLANVDDGTC I+LD
Sbjct:    1 MAATNASIFASSTQPCLPVPPTIPNTLATPFLNVSSPRSYLVKIKHVKFSKKISAAAVATTTTT-EEIQEYKLPSWAKFEIGRAAVYWKTMNGLPPTSGEKLKLFYNPAATQLVPNEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADAPIYSIQICIPKHALNLIFSFTNGVDWDGPYRLQFQVPKALQNKPIDFFNKGLAEELSKEGACEQAIFPDTNKIITKCAMIGNLSKEGGDRCDLNFVLGCTDPSSHLYNPLANVDDGTCTIELD 272
[Close]
BLAST of Cc_v2.0_25311.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3T0A4|A0A0S3T0A4_PHAAN (Post-illumination chlorophyll fluorescence increase OS=Vigna angularis var. angularis OX=157739 GN=Vigan.09G224700 PE=4 SV=1)

HSP 1 Score: 484.952 bits (1247), Expect = 1.096e-171
Identity = 240/278 (86.33%), Postives = 257/278 (92.45%), Query Frame = 0 
Query:    1 MAATNASIFASSTQPCLPVPPSISNTLASPFLNVSLPRCYLDKKRHVKFSQKISAAAVATTTTTNEEIQEYKLPSWAVFEIGRAPVYWKTMNGLPPTSGEKLKLFYNPDAAQLAPSEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADAPIYTIQICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPKPFQNKAIDFFNKGLAEELSKEGACEKAIFPDTTKVITRCAMIGNLSKEGGDRCELNLVPGCTDPSSHLYNPLANVDDGTCPIDLDSESEE 278
            MAATNAS FASSTQPCLPV P+ISNTL+S FLNVSLP+ Y  KK H+K S+KI AAAVAT TTT EEI+EYKLPSWA FEIGRAPVYWKTMNGLPPTSGEKLKL YNP AAQL PSEEFGIAFNGGFNQPIMCGGEPRAMLRK+RGKADAPIYTIQICIPKHA+NLIFSFTNGVDWDGPYRLQF+VPK  +NK I+FFN+GLA+ELSKEGACE+AIFPDT  VI+RCAMIGNLSKEGGDRC+LNLV GCTDPSSHLYNPLANVDDGTCPIDLDSESE+
Sbjct:    1 MAATNASFFASSTQPCLPVSPTISNTLSSSFLNVSLPKSYPVKKNHMKISKKICAAAVATPTTTTEEIKEYKLPSWAQFEIGRAPVYWKTMNGLPPTSGEKLKLLYNPAAAQLVPSEEFGIAFNGGFNQPIMCGGEPRAMLRKNRGKADAPIYTIQICIPKHALNLIFSFTNGVDWDGPYRLQFEVPKALKNKPIEFFNRGLADELSKEGACEQAIFPDTNVVISRCAMIGNLSKEGGDRCDLNLVLGCTDPSSHLYNPLANVDDGTCPIDLDSESED 278
[Close]
BLAST of Cc_v2.0_25311.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9TAY2|A0A0L9TAY2_PHAAN (Post-illumination chlorophyll fluorescence increase OS=Phaseolus angularis OX=3914 GN=LR48_Vigan406s009900 PE=4 SV=1)

HSP 1 Score: 484.952 bits (1247), Expect = 1.096e-171
Identity = 240/278 (86.33%), Postives = 257/278 (92.45%), Query Frame = 0 
Query:    1 MAATNASIFASSTQPCLPVPPSISNTLASPFLNVSLPRCYLDKKRHVKFSQKISAAAVATTTTTNEEIQEYKLPSWAVFEIGRAPVYWKTMNGLPPTSGEKLKLFYNPDAAQLAPSEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADAPIYTIQICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPKPFQNKAIDFFNKGLAEELSKEGACEKAIFPDTTKVITRCAMIGNLSKEGGDRCELNLVPGCTDPSSHLYNPLANVDDGTCPIDLDSESEE 278
            MAATNAS FASSTQPCLPV P+ISNTL+S FLNVSLP+ Y  KK H+K S+KI AAAVAT TTT EEI+EYKLPSWA FEIGRAPVYWKTMNGLPPTSGEKLKL YNP AAQL PSEEFGIAFNGGFNQPIMCGGEPRAMLRK+RGKADAPIYTIQICIPKHA+NLIFSFTNGVDWDGPYRLQF+VPK  +NK I+FFN+GLA+ELSKEGACE+AIFPDT  VI+RCAMIGNLSKEGGDRC+LNLV GCTDPSSHLYNPLANVDDGTCPIDLDSESE+
Sbjct:    1 MAATNASFFASSTQPCLPVSPTISNTLSSSFLNVSLPKSYPVKKNHMKISKKICAAAVATPTTTTEEIKEYKLPSWAQFEIGRAPVYWKTMNGLPPTSGEKLKLLYNPAAAQLVPSEEFGIAFNGGFNQPIMCGGEPRAMLRKNRGKADAPIYTIQICIPKHALNLIFSFTNGVDWDGPYRLQFEVPKALKNKPIEFFNRGLADELSKEGACEQAIFPDTNVVISRCAMIGNLSKEGGDRCDLNLVLGCTDPSSHLYNPLANVDDGTCPIDLDSESED 278
[Close]
BLAST of Cc_v2.0_25311.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0JR79|A0A8T0JR79_PHAAN (Post-illumination chlorophyll fluorescence increase OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0165360 PE=4 SV=1)

HSP 1 Score: 480.33 bits (1235), Expect = 7.144e-170
Identity = 238/275 (86.55%), Postives = 254/275 (92.36%), Query Frame = 0 
Query:    1 MAATNASIFASSTQPCLPVPPSISNTLASPFLNVSLPRCYLDKKRHVKFSQKISAAAVATTTTTNEEIQEYKLPSWAVFEIGRAPVYWKTMNGLPPTSGEKLKLFYNPDAAQLAPSEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADAPIYTIQICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPKPFQNKAIDFFNKGLAEELSKEGACEKAIFPDTTKVITRCAMIGNLSKEGGDRCELNLVPGCTDPSSHLYNPLANVDDGTCPIDLDSE 275
            MAATNAS FASSTQPCLPV P+ISNTL+S FLNVSLP+ Y  KK H+K S+KI AAAVAT TTT EEI+EYKLPSWA FEIGRAPVYWKTMNGLPPTSGEKLKL YNP AAQL PSEEFGIAFNGGFNQPIMCGGEPRAMLRK+RGKADAPIYTIQICIPKHA+NLIFSFTNGVDWDGPYRLQF+VPK  +NK I+FFN+GLA+ELSKEGACE+AIFPDT  VI+RCAMIGNLSKEGGDRC+LNLV GCTDPSSHLYNPLANVDDGTCPIDLDSE
Sbjct:    1 MAATNASFFASSTQPCLPVSPTISNTLSSSFLNVSLPKSYPVKKNHMKISKKICAAAVATPTTTTEEIKEYKLPSWAQFEIGRAPVYWKTMNGLPPTSGEKLKLLYNPAAAQLVPSEEFGIAFNGGFNQPIMCGGEPRAMLRKNRGKADAPIYTIQICIPKHALNLIFSFTNGVDWDGPYRLQFEVPKALKNKPIEFFNRGLADELSKEGACEQAIFPDTNVVISRCAMIGNLSKEGGDRCDLNLVLGCTDPSSHLYNPLANVDDGTCPIDLDSE 275
[Close]
BLAST of Cc_v2.0_25311.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9LVZ5|PIFI_ARATH (Protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PIFI PE=2 SV=1)

HSP 1 Score: 376.326 bits (965), Expect = 1.608e-131
Identity = 183/277 (66.06%), Postives = 219/277 (79.06%), Query Frame = 0 
Query:    2 AATNASIFASSTQPCLPVPPSISNTLASPFLNVSLPRCYLDKKRHVKFSQKISAAAVATTTTTNEEIQEYKLPSWAVFEIGRAPVYWKTMNGLPPTSGEKLKLFYNPDAAQLAPSEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADAPIYTIQICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPKPFQNKAIDFFNKGLAEELSKEGACEKAIFPDTTKVITRCAMIGNLSKEGGDRCELNLVPGCTDPSSHLYNPLANVDDGTCPIDLDSESEE 278
            AA  +++FAS +QP       + ++   P L    PR  LD          +   AVATT    EEI+EYKLPSWA+FE+G APVYWKTMNGLPPTSGEKLKLFYNP A++L  +E++G+AFNGGFNQPIMCGGEPRAML+KDRGKAD+PIYT+QICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPK +QNK I+FFN+GLA ELS++GACE+AIFPD+  V TRC MI NL+ EGGDRC L+LVPGC D +S  +NP ANVDDG+CP++L S+S+E
Sbjct:    4 AANTSAVFASPSQPLSSKRSFLYSSRIGPILR-RFPRKKLD----------LQVKAVATTLAPLEEIKEYKLPSWAMFEMGTAPVYWKTMNGLPPTSGEKLKLFYNPAASKLTLNEDYGVAFNGGFNQPIMCGGEPRAMLKKDRGKADSPIYTMQICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPKRWQNKPIEFFNEGLANELSQDGACERAIFPDSNVVPTRCTMIANLTVEGGDRCNLDLVPGCMDTNSEHFNPYANVDDGSCPLEL-SDSDE 268
[Close]
BLAST of Cc_v2.0_25311.1 vs. Araport11
Match: | (Symbols: PIFI | post-illumination chlorophyll fluorescence increase | chr3:5356782-5358418 REVERSE LENGTH=268)

HSP 1 Score: 376.326 bits (965), Expect = 1.683e-132
Identity = 183/277 (66.06%), Postives = 219/277 (79.06%), Query Frame = 0 
Query:    2 AATNASIFASSTQPCLPVPPSISNTLASPFLNVSLPRCYLDKKRHVKFSQKISAAAVATTTTTNEEIQEYKLPSWAVFEIGRAPVYWKTMNGLPPTSGEKLKLFYNPDAAQLAPSEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADAPIYTIQICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPKPFQNKAIDFFNKGLAEELSKEGACEKAIFPDTTKVITRCAMIGNLSKEGGDRCELNLVPGCTDPSSHLYNPLANVDDGTCPIDLDSESEE 278
            AA  +++FAS +QP       + ++   P L    PR  LD          +   AVATT    EEI+EYKLPSWA+FE+G APVYWKTMNGLPPTSGEKLKLFYNP A++L  +E++G+AFNGGFNQPIMCGGEPRAML+KDRGKAD+PIYT+QICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPK +QNK I+FFN+GLA ELS++GACE+AIFPD+  V TRC MI NL+ EGGDRC L+LVPGC D +S  +NP ANVDDG+CP++L S+S+E
Sbjct:    4 AANTSAVFASPSQPLSSKRSFLYSSRIGPILR-RFPRKKLD----------LQVKAVATTLAPLEEIKEYKLPSWAMFEMGTAPVYWKTMNGLPPTSGEKLKLFYNPAASKLTLNEDYGVAFNGGFNQPIMCGGEPRAMLKKDRGKADSPIYTMQICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPKRWQNKPIEFFNEGLANELSQDGACERAIFPDSNVVPTRCTMIANLTVEGGDRCNLDLVPGCMDTNSEHFNPYANVDDGSCPLEL-SDSDE 268
[Close]
BLAST of Cc_v2.0_25311.1 vs. Araport11
Match: | (Symbols: PIFI | post-illumination chlorophyll fluorescence increase | chr3:5356782-5358418 REVERSE LENGTH=268)

HSP 1 Score: 371.703 bits (953), Expect = 1.371e-130
Identity = 181/277 (65.34%), Postives = 218/277 (78.70%), Query Frame = 0 
Query:    2 AATNASIFASSTQPCLPVPPSISNTLASPFLNVSLPRCYLDKKRHVKFSQKISAAAVATTTTTNEEIQEYKLPSWAVFEIGRAPVYWKTMNGLPPTSGEKLKLFYNPDAAQLAPSEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADAPIYTIQICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPKPFQNKAIDFFNKGLAEELSKEGACEKAIFPDTTKVITRCAMIGNLSKEGGDRCELNLVPGCTDPSSHLYNPLANVDDGTCPIDLDSESEE 278
            AA  +++FAS +QP       + ++   P L    PR  LD          +   AVATT    EEI+EYKLPSWA+FE+G APVYWKTMNGLPPTSGEKLKLFYNP A++L  +E++G+AFNGGFNQPIMCGGEPRAML+KDRGKAD+PIYT+QICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPK +QNK I+FFN+GLA ELS++GACE+AIFPD+  V TRC MI NL+ EG +RC L+LVPGC D +S  +NP ANVDDG+CP++L S+S+E
Sbjct:    4 AANTSAVFASPSQPLSSKRSFLYSSRIGPILR-RFPRKKLD----------LQVKAVATTLAPLEEIKEYKLPSWAMFEMGTAPVYWKTMNGLPPTSGEKLKLFYNPAASKLTLNEDYGVAFNGGFNQPIMCGGEPRAMLKKDRGKADSPIYTMQICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPKRWQNKPIEFFNEGLANELSQDGACERAIFPDSNVVPTRCTMIANLTVEGVNRCNLDLVPGCMDTNSEHFNPYANVDDGSCPLEL-SDSDE 268
[Close]
BLAST of Cc_v2.0_25311.1 vs. Araport11
Match: | (Symbols: PIFI | post-illumination chlorophyll fluorescence increase | chr3:5356782-5358265 REVERSE LENGTH=248)

HSP 1 Score: 368.237 bits (944), Expect = 1.588e-129
Identity = 171/235 (72.77%), Postives = 202/235 (85.96%), Query Frame = 0 
Query:   44 KRHVKFSQKISAAAVATTTTTNEEIQEYKLPSWAVFEIGRAPVYWKTMNGLPPTSGEKLKLFYNPDAAQLAPSEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADAPIYTIQICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPKPFQNKAIDFFNKGLAEELSKEGACEKAIFPDTTKVITRCAMIGNLSKEGGDRCELNLVPGCTDPSSHLYNPLANVDDGTCPIDLDSESEE 278
            +R  +    +   AVATT    EEI+EYKLPSWA+FE+G APVYWKTMNGLPPTSGEKLKLFYNP A++L  +E++G+AFNGGFNQPIMCGGEPRAML+KDRGKAD+PIYT+QICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPK +QNK I+FFN+GLA ELS++GACE+AIFPD+  V TRC MI NL+ EGGDRC L+LVPGC D +S  +NP ANVDDG+CP++L S+S+E
Sbjct:   15 RRFPRKKLDLQVKAVATTLAPLEEIKEYKLPSWAMFEMGTAPVYWKTMNGLPPTSGEKLKLFYNPAASKLTLNEDYGVAFNGGFNQPIMCGGEPRAMLKKDRGKADSPIYTMQICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPKRWQNKPIEFFNEGLANELSQDGACERAIFPDSNVVPTRCTMIANLTVEGGDRCNLDLVPGCMDTNSEHFNPYANVDDGSCPLEL-SDSDE 248
[Close]
BLAST of Cc_v2.0_25311.1 vs. Araport11
Match: | (Symbols: PIFI | post-illumination chlorophyll fluorescence increase | chr3:5356782-5358418 REVERSE LENGTH=265)

HSP 1 Score: 364.77 bits (935), Expect = 5.024e-128
Identity = 180/277 (64.98%), Postives = 216/277 (77.98%), Query Frame = 0 
Query:    2 AATNASIFASSTQPCLPVPPSISNTLASPFLNVSLPRCYLDKKRHVKFSQKISAAAVATTTTTNEEIQEYKLPSWAVFEIGRAPVYWKTMNGLPPTSGEKLKLFYNPDAAQLAPSEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADAPIYTIQICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPKPFQNKAIDFFNKGLAEELSKEGACEKAIFPDTTKVITRCAMIGNLSKEGGDRCELNLVPGCTDPSSHLYNPLANVDDGTCPIDLDSESEE 278
            AA  +++FAS +QP       + ++   P L    PR  LD          +   AVATT    EEI+EYKLPSWA+FE+G APVYWKTMNGLPPTS   LKLFYNP A++L  +E++G+AFNGGFNQPIMCGGEPRAML+KDRGKAD+PIYT+QICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPK +QNK I+FFN+GLA ELS++GACE+AIFPD+  V TRC MI NL+ EGGDRC L+LVPGC D +S  +NP ANVDDG+CP++L S+S+E
Sbjct:    4 AANTSAVFASPSQPLSSKRSFLYSSRIGPILR-RFPRKKLD----------LQVKAVATTLAPLEEIKEYKLPSWAMFEMGTAPVYWKTMNGLPPTS---LKLFYNPAASKLTLNEDYGVAFNGGFNQPIMCGGEPRAMLKKDRGKADSPIYTMQICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPKRWQNKPIEFFNEGLANELSQDGACERAIFPDSNVVPTRCTMIANLTVEGGDRCNLDLVPGCMDTNSEHFNPYANVDDGSCPLEL-SDSDE 265
[Close]
BLAST of Cc_v2.0_25311.1 vs. Araport11
Match: | (Symbols: PIFI | post-illumination chlorophyll fluorescence increase | chr3:5356782-5358070 REVERSE LENGTH=214)

HSP 1 Score: 351.288 bits (900), Expect = 1.971e-123
Identity = 161/213 (75.59%), Postives = 189/213 (88.73%), Query Frame = 0 
Query:   66 EEIQEYKLPSWAVFEIGRAPVYWKTMNGLPPTSGEKLKLFYNPDAAQLAPSEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADAPIYTIQICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPKPFQNKAIDFFNKGLAEELSKEGACEKAIFPDTTKVITRCAMIGNLSKEGGDRCELNLVPGCTDPSSHLYNPLANVDDGTCPIDLDSESEE 278
            +    YKLPSWA+FE+G APVYWKTMNGLPPTSGEKLKLFYNP A++L  +E++G+AFNGGFNQPIMCGGEPRAML+KDRGKAD+PIYT+QICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPK +QNK I+FFN+GLA ELS++GACE+AIFPD+  V TRC MI NL+ EGGDRC L+LVPGC D +S  +NP ANVDDG+CP++L S+S+E
Sbjct:    3 DYFDRYKLPSWAMFEMGTAPVYWKTMNGLPPTSGEKLKLFYNPAASKLTLNEDYGVAFNGGFNQPIMCGGEPRAMLKKDRGKADSPIYTMQICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPKRWQNKPIEFFNEGLANELSQDGACERAIFPDSNVVPTRCTMIANLTVEGGDRCNLDLVPGCMDTNSEHFNPYANVDDGSCPLEL-SDSDE 214
The following BLAST results are available for this feature:
BLAST of Cc_v2.0_25311.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A151SGV1|A0A151SGV1_CAJCA0.000e+0100.00Post-illumination chlorophyll fluorescence increas... [more]
tr|A0A8B8KPE2|A0A8B8KPE2_ABRPR9.893e-17685.97Uncharacterized protein LOC113857072 OS=Abrus prec... [more]
tr|A0A4D6MN61|A0A4D6MN61_VIGUN3.390e-17485.20Post-illumination chlorophyll fluorescence increas... [more]
tr|V7AT30|V7AT30_PHAVU9.399e-17486.33Post-illumination chlorophyll fluorescence increas... [more]
tr|C6TDB8|C6TDB8_SOYBN1.931e-17388.49Post-illumination chlorophyll fluorescence increas... [more]
tr|A0A371FPA3|A0A371FPA3_MUCPR2.195e-17285.25Post-illumination chlorophyll fluorescence increas... [more]
tr|A0A445JRF8|A0A445JRF8_GLYSO9.300e-17289.01Post-illumination chlorophyll fluorescence increas... [more]
tr|A0A0S3T0A4|A0A0S3T0A4_PHAAN1.096e-17186.33Post-illumination chlorophyll fluorescence increas... [more]
tr|A0A0L9TAY2|A0A0L9TAY2_PHAAN1.096e-17186.33Post-illumination chlorophyll fluorescence increas... [more]
tr|A0A8T0JR79|A0A8T0JR79_PHAAN7.144e-17086.55Post-illumination chlorophyll fluorescence increas... [more]
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BLAST of Cc_v2.0_25311.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot )
Total hits: 1
Match NameE-valueIdentityDescription
sp|Q9LVZ5|PIFI_ARATH1.608e-13166.06Protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE... [more]
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BLAST of Cc_v2.0_25311.1 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11)
Total hits: 5
Match NameE-valueIdentityDescription
|1.683e-13266.06Symbols: PIFI | post-illumination chlorophyll fluo... [more]
|1.371e-13065.34Symbols: PIFI | post-illumination chlorophyll fluo... [more]
|1.588e-12972.77Symbols: PIFI | post-illumination chlorophyll fluo... [more]
|5.024e-12864.98Symbols: PIFI | post-illumination chlorophyll fluo... [more]
|1.971e-12375.59Symbols: PIFI | post-illumination chlorophyll fluo... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR044960Ribulose bisphosphate carboxylase/oxygenase activase-likePANTHERPTHR32429coord: 80..270

Sequences
The following sequences are available for this feature:

mRNA sequence

>drCajCajn.Asha.2.0.Cc_v2.0_25311.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_25311.1; Name=Cc_v2.0_25311.1; organism=Cajanus cajan; type=mRNA; length=837bp
ATGGCTGCAACCAATGCGTCAATCTTTGCGTCTTCCACGCAACCATGCTT
GCCCGTACCTCCTAGCATTTCAAACACGCTTGCTAGTCCTTTTCTCAATG
TGTCATTACCGAGATGTTACCTTGATAAGAAAAGGCATGTGAAATTTAGC
CAAAAAATCAGTGCTGCTGCTGTTGcaacaacaacaacaacaaATGAGGA
AATTCAAGAGTACAAGCTTCCTTCATGGGCTGTGTTTGAAATTGGGAGGG
CTCCTGTCTATTGGAAAACCATGAATGGCCTCCCTCCTACTTCAGGAGAA
AAGCTAAAACTTTTCTATAATCCAGATGCAGCTCAACTTGCCCCTAGTGA
AGAATTTGGAATTGCTTTTAATGGAGGTTTTAATCAGCCAATTATGTGTG
GTGGTGAGCCAAGGGCAATGCTTAGAAAAGATCGAGGCAAAGCTGATGCC
CCAATATATACCATTCAAATATGCATTCCTAAGCATGCTGTGAACTTGAT
CTTCTCATTTACAAATGGAGTAGACTGGGATGGTCCATATAGACTGCAAT
TTCAAGTTCCCAAGCCTTTCCAGAACAAGGCAATTGACTTCTTTAATAAG
GGCTTGGCAGAGGAACTGAGTAAAGAAGGAGCATGTGAGAAAGCAATATT
TCCAGACACAACTAAAGTTATAACCAGATGTGCCATGATTGGTAATTTGT
CAAAAGAAGGGGGTGATCGTTGCGAACTGAATCTTGTTCCAGGATGCACA
GATCCTAGTTCGCACCTGTACAACCCACTAGCCAATGTAGATGATGGAAC
ATGTCCAATTGATTTGGATTCTGAGTCTGAGGAATAG
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protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_25311.1

>drCajCajn.Asha.2.0.Cc_v2.0_25311.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_25311.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_25311.1; organism=Cajanus cajan; type=polypeptide; length=278bp
MAATNASIFASSTQPCLPVPPSISNTLASPFLNVSLPRCYLDKKRHVKFS
QKISAAAVATTTTTNEEIQEYKLPSWAVFEIGRAPVYWKTMNGLPPTSGE
KLKLFYNPDAAQLAPSEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADA
PIYTIQICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPKPFQNKAIDFFNK
GLAEELSKEGACEKAIFPDTTKVITRCAMIGNLSKEGGDRCELNLVPGCT
DPSSHLYNPLANVDDGTCPIDLDSESEE
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mRNA from alignment at CcLG11_v2.0:1813133..1816892-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drCajCajn.Asha.2.0.Cc_v2.0_25311.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_25311.1; Name=Cc_v2.0_25311.1; organism=Cajanus cajan; type=mRNA; length=3760bp; location=Sequence derived from: CcLG11_v2.0:1813133..1816892- (Cajanus cajan
CTCTTGTTATCTCTTGGCTATTATAAATTTGGACACGTTCACCTCTTAGA
TATCACTACGTCTCTGAATTGTGAATAGCAAGCACGCACCAAAATAGTGT
GATACATGGCTGCAACCAATGCGTCAATCTTTGCGTCTTCCACGCAACCA
TGCTTGCCCGTACCTCCTAGCATTTCAAACACGCTTGGTATGTCTCTCTA
GTATGCATTTATTTCATTTTAATTGCATCTTTCAATATTTCTTTTATTAT
GGTTACTTAGTTTTATATAATTATATCTGTCTTCACTGTGGTTATTGCTC
TGTTAAGAGTCCTAGAAGAATTTAGTTTCTCCACCATACCAGGAATCAAA
ATAAGTTATCATTGCATTGAGAGTGGATAAGAACTTTAATAAAGCTTAAA
TGTTTTCTGTTCTCACAGATACTCGCTATCAGCCTTATACTGTCTGACTT
TTGACAATTCTTTCCTTAAATGATTTCTCAATTTGTTGGAAAAAGAAGTA
GCTGTTGGGTTGTTATAAACATTCAAATTCCATAAGACGTTTCATAATAC
AAAATCCCTTGATTGACGCAAGGGAAGGAAAAGGCTTGGTTAAATTATAG
TTACTCTCACATTCCTGGGACAATCTATTTAGTTGTGAACCGATTCTCAG
TATGTACAAAAACTATGGAGTGAGATTAGTTTCTAATTCACAACTAGAAG
ATACCGTGCTAGGACAAAATAAAATAAAATTATAGCTACTCAGAATATAC
TTATTAAGAACCAAATGTTAATTGTGTGGGTGATTTCATACTCTCATCCC
TTAACTTAAGTTGTGGGATCCATCTACCCTTGAGTATGGAATCACAACAA
TTTGGAGTACTTTACTCCTTAATGGGTCGACCCAATGCAAAGGGTGATTA
GTCAGGTTCACGGGTCTAAATTGTTCTATACACATAGACTCAGGATCCAA
CACTCTAACTACATGTTTAAGGGACACGATTATCTACAAACCATTTAAAT
CTTGTTGGCAGGTTCATAGGTGTGGATAACACCTGGTTACAGCAAAAGAG
AATATACTTATTGAGGATCCTGCAAAATTAGTTTCTTTTATCAGATTTCT
GCATAGGCATTTCCCCTTCTGCATCATAGTCTGAATGTCAAATTCTCATC
TTAATAATATCCGTATGGTATACCAACATCCATGTTAATCTTGTAACTTT
AGGACCAATATTGGTTAGTAAAAAGGAGTGTGAACCACCTAGCATATCAG
AATAGCTAAACTAGTCTATGCTCTTTCAAATGTAACGCTTATCATTTCTC
GTGCAGCTAGTCCTTTTCTCAATGTGTCATTACCGAGATGTTACCTTGAT
AAGAAAAGGCATGTGAAATTTAGCCAAAAAATCAGTGCTGCTGCTGTTGC
AACAACAACAACAACAAATGAGGAAATTCAAGAGTATGAATTCCCCTTGT
TAATACCATTTACTATTTTTGTCTTTTGAGAAAGGAAGATGAGACATTTG
TAGACGTTTGCTTTTGCTTGCCCATTATGAAAGGCATTATATATTGGAAA
CTAAATAATGAAAGGGCGTGATAGGGATGGTGTTCAAGTTATAGTGTTCT
TTGTGTTCTAAGAATCTTTTGTTTCCCAAGAATAAAGTATAGTTTTGGAT
AACCTTATTACAATACCATTGTTTGCTATCAATGTTTACAGGTACAAGCT
TCCTTCATGGGCTGTGTTTGAAATTGGGAGGGCTCCTGTCTATTGGAAAA
CCATGAATGGCCTCCCTCCTACTTCAGTGAGTATAAAAGTATTAACTCAT
TGCGAGTTACTTAAGCCACAACCTTTTAGTAATTTTTTTTTACAAATTTT
GGCAGGGAGAAAAGCTAAAACTTTTCTATAATCCAGATGCAGCTCAACTT
GCCCCTAGTGAAGAATTTGGAATTGCTTTTAATGGTAATTTTTGTGACGT
CGCTTGTTTGCCCAAAAATTCACCTTCCTTAACATTTGTAAGGCAAAATA
TTTGAATTCATTAAAAACAGACATAGAATATTTCAAGAACTAGCTATATA
AATTACCAATTGTAATTCAGAATTGGCATTGGATGTTATAAGTCATTGAA
ATAATGTTATATGAAAATTATGGAAATTTTTTTTGAGCCTCAAGGAAGGT
TCCATCATACCTCACCCGGCCTAATCTGGTATATAAGAAGTTTCAACTGG
CATTGATCATCAATATGTAAGAGATCATGTAATTTTGCCTAATATCTTAT
TGTTGTAATGAATACATTGTGGAGGCTAGTATGTCATACTCATTCTTTTT
TCTGGTCGTTTTTTTCTCACTGACTTCTAAAATTTCATCCATTCAGGAGG
TTTTAATCAGCCAATTATGTGTGGTGGTGAGCCAAGGGCAATGCTTAGAA
AAGATCGAGGCAAAGCTGATGCCCCAATATATACCATTCAAATATGCATT
CCTAAGCATGGTAATATGGTACTCTTGTTCCTCAATATATTTGCTGACAA
AACCAATCAATGTTTTCTTGTTAAACTTCTCTTTTTTTGTGCAGCTGTGA
ACTTGATCTTCTCATTTACAAATGGAGTAGACTGGGATGGTCCATATAGA
CTGCAATTTCAAGTTCCCAAGCCTTTCCAGAACAAGGCAATTGACTTCTT
TAATAAGGTAAATGGGCAAACCTTTCCCCTCTAATTCAAGTGCCTCTAGC
TTAGTACACAAATCGCTCTAACTTTATAATCGGATAAAGCTTACTTATAG
TACCATGTTATTGTTTTGCTGTTTACCAATCAGAATTAGTATCTCGATCA
TTTGCGTAATAAATAATTTTATTAAATATTAACGTGTATTATTGAAAATA
AAACTTTAAATTGATTGGAAAACTACACCAATTACTGTATCCAAAAAAAA
AAAAATTCTTATAATCAAACTCCCAATCTTTCTTCTGAAGTTATGAGACG
AAAGTAATGACTAAAGCACATATATGTTTGACAGTCTCAATTTGATTTTA
AAATGACAAAATTTTTCATTCTAAACAGCAGTTGATAGCAAAACTATTAT
AAGGATAACATCAGTCAAGTGGTGAAGGAATGGATTTTATCTATTGTTTC
CATATGACAAAACAAGTATAACCAAGCTTGTGAGAATTTAGTGCATCAAT
ATTGACACTAATTAGTGGAGTATTATAAGAAACCGAAAATATACAACACT
GGAATCCTTTTGAGCATCAGTTAACATGACCCTGAATTGGGTGTACTATT
CTGTGGTAGGGCTTGGCAGAGGAACTGAGTAAAGAAGGAGCATGTGAGAA
AGCAATATTTCCAGACACAACTAAAGTTATAACCAGATGTGCCATGATTG
GTAATTTGTCAAAAGAAGGGGTGAGCACATTCTTCCATTCCTCAAAGTAT
TTTCTCTTTAAAATACTGCTACTCATTGGAACACTTTCAGTTTCCTAACG
GTGAATAAAAACTTCCCTGCAGGGTGATCGTTGCGAACTGAATCTTGTTC
CAGGATGCACAGATCCTAGTTCGCACCTGTACAACCCACTAGCCAATGTA
GATGATGGAACATGTCCAATTGATTTGGATTCTGAGTCTGAGGAATAGAA
TTATACTTTGCATAAATAATCATTATCATACTGATGTTGGTTTTAAGTAC
ATAGTGTATATTGTAAATTCCACTCTATACATTGAACATTGGCAAGAGCT
GGCCTTGAGGTAGTAATTAAAAAACATTGGTCCTGCTACTTTTTTTTTTT
TTTTTTTTTT
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Coding sequence (CDS) from alignment at CcLG11_v2.0:1813133..1816892-

>drCajCajn.Asha.2.0.Cc_v2.0_25311.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_25311.1; Name=Cc_v2.0_25311.1; organism=Cajanus cajan; type=CDS; length=837bp; location=Sequence derived from: CcLG11_v2.0:1813133..1816892- (Cajanus cajan
ATGGCTGCAACCAATGCGTCAATCTTTGCGTCTTCCACGCAACCATGCTT
GCCCGTACCTCCTAGCATTTCAAACACGCTTGCTAGTCCTTTTCTCAATG
TGTCATTACCGAGATGTTACCTTGATAAGAAAAGGCATGTGAAATTTAGC
CAAAAAATCAGTGCTGCTGCTGTTGCAACAACAACAACAACAAATGAGGA
AATTCAAGAGTACAAGCTTCCTTCATGGGCTGTGTTTGAAATTGGGAGGG
CTCCTGTCTATTGGAAAACCATGAATGGCCTCCCTCCTACTTCAGGAGAA
AAGCTAAAACTTTTCTATAATCCAGATGCAGCTCAACTTGCCCCTAGTGA
AGAATTTGGAATTGCTTTTAATGGAGGTTTTAATCAGCCAATTATGTGTG
GTGGTGAGCCAAGGGCAATGCTTAGAAAAGATCGAGGCAAAGCTGATGCC
CCAATATATACCATTCAAATATGCATTCCTAAGCATGCTGTGAACTTGAT
CTTCTCATTTACAAATGGAGTAGACTGGGATGGTCCATATAGACTGCAAT
TTCAAGTTCCCAAGCCTTTCCAGAACAAGGCAATTGACTTCTTTAATAAG
GGCTTGGCAGAGGAACTGAGTAAAGAAGGAGCATGTGAGAAAGCAATATT
TCCAGACACAACTAAAGTTATAACCAGATGTGCCATGATTGGTAATTTGT
CAAAAGAAGGGGGTGATCGTTGCGAACTGAATCTTGTTCCAGGATGCACA
GATCCTAGTTCGCACCTGTACAACCCACTAGCCAATGTAGATGATGGAAC
ATGTCCAATTGATTTGGATTCTGAGTCTGAGGAATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR044960RCA-like