Cc_v2.0_19465.1

Transcript Overview
NameCc_v2.0_19465.1
Unique NamedrCajCajn.Asha.2.0.Cc_v2.0_19465.1
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length567
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CcLG08_v2.0chromosomeCcLG08_v2.0:53336921..53338162 +Cajanus cajan cv. Asha genome v2.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
avjccaL137Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0222Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL291Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0413Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0575Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0849Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carccaL066Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccapsR677Pisum sativum Cameor genome v1aPisum sativum
ccapsR713Pisum sativum Cameor genome v1aPisum sativum
ccapsR715Pisum sativum Cameor genome v1aPisum sativum
carccaL616Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccavrvR613Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavrvR656Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavfhR659Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR748Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavfhR695Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR782Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavssR722Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccccaL0080Cajanus cajan Asha genome v1.0Cajanus cajan
ccavssR750Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccccaL0659Cajanus cajan Asha genome v1.0Cajanus cajan
ccavumR698Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR568Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavuR594Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR753Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavunR489Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccavunR516Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR777Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccapvfR801Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
rna-TanjilR_27195Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun06g156900.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Va09G054840.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Phvul.003G082200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vum_05G00727.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-XM_014662551.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-TanjilR_09365Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_014652888.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigun03g443200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
evm.Ca_v2.0_19501Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Vigun06g156900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Va01G100550.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Psat1g177600.1Pisum sativum Cameor genome v1aPisum sativum
Phvul.006G145000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
jg48606.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
evm.Ca_v2.0_00700Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Vigun03g443200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
PvulFLAVERTChr06.1001649Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
jg39084.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Hedin2.R1.4g242440.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vum_01G04140.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vfaba.Hedin2.R1.1g448520.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Psat4g005200.1Pisum sativum Cameor genome v1aPisum sativum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-KK1_017256Cajanus cajan Asha genome v1.0Cajanus cajan
rna-KK1_004577Cajanus cajan Asha genome v1.0Cajanus cajan
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Cc_v2.0_19465drCajCajn.Asha.2.0.Cc_v2.0_19465Cajanus cajangene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_19465.1.exon1drCajCajn.Asha.2.0.Cc_v2.0_19465.1.exon1Cajanus cajanexon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_19465.1.utr5p1drCajCajn.Asha.2.0.Cc_v2.0_19465.1.utr5p1Cajanus cajanfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.Cc_v2.0_19465.1drCajCajn.Asha.2.0.cds.Cc_v2.0_19465.1Cajanus cajanCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_19465.1.utr3p1drCajCajn.Asha.2.0.Cc_v2.0_19465.1.utr3p1Cajanus cajanthree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drCajCajn.Asha.2.0.Cc_v2.0_19465.1drCajCajn.Asha.2.0.Cc_v2.0_19465.1Cajanus cajanpolypeptide
drCajCajn.Asha.2.0.Cc_v2.0_19465.1drCajCajn.Asha.2.0.Cc_v2.0_19465.1-proteinCajanus cajanpolypeptide


Homology
[Close]
BLAST of Cc_v2.0_19465.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151T6M0|A0A151T6M0_CAJCA (RING-type domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_017256 PE=4 SV=1)

HSP 1 Score: 380.178 bits (975), Expect = 3.911e-133
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0 
Query:    1 MSQLGAELQEPQREPRTILGLLSEQMEGGTRRRRTLKERFGFMGMGCCGATWGFRSHHDALSQTEREQQQERDPECVSPGMNLAAALAAERQLRGPQEEAVRAPWRVSLMRLLEEAEAEAETEQEQEKEKGGVAGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILHIF 188
            MSQLGAELQEPQREPRTILGLLSEQMEGGTRRRRTLKERFGFMGMGCCGATWGFRSHHDALSQTEREQQQERDPECVSPGMNLAAALAAERQLRGPQEEAVRAPWRVSLMRLLEEAEAEAETEQEQEKEKGGVAGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILHIF
Sbjct:    1 MSQLGAELQEPQREPRTILGLLSEQMEGGTRRRRTLKERFGFMGMGCCGATWGFRSHHDALSQTEREQQQERDPECVSPGMNLAAALAAERQLRGPQEEAVRAPWRVSLMRLLEEAEAEAETEQEQEKEKGGVAGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILHIF 188
[Close]
BLAST of Cc_v2.0_19465.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3S3U7|A0A0S3S3U7_PHAAN (RING-type domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.05G089000 PE=4 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 2.656e-87
Identity = 154/213 (72.30%), Postives = 167/213 (78.40%), Query Frame = 0 
Query:    1 MSQLGAELQEP-QREPRTILGLLSEQMEG---GTRRRRTLKERFGFMGMGCCGATWGFRSHHDALSQTEREQQQ-----ERDP------ECVS-----PGMNLAAALAAERQLRGPQEEAVRAP---WRVSLMRLLEEAEA--EAETEQEQEKEKGGVAGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILHIF 188
            MSQLG  LQE  QREPRTILGLLS+QM+G   G RRR++ KERFGFMG+GCCGATWGFRS  DALS T+ EQQQ     E DP      +CV       GMNLAAALAAERQ+RGPQEE  RAP   WRVSLMRLLEE+E    A  E+E+E+EKG V GNDS+CCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEIL IF
Sbjct:    1 MSQLGVVLQESLQREPRTILGLLSDQMDGVESGARRRKSFKERFGFMGIGCCGATWGFRS--DALSFTQGEQQQQANHQETDPGQGSGLDCVDQGAAGSGMNLAAALAAERQIRGPQEEVGRAPGTPWRVSLMRLLEESEGGESAAVEKEKEEEKGDVVGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILDIF 211
[Close]
BLAST of Cc_v2.0_19465.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9VF28|A0A0L9VF28_PHAAN (RING-type domain-containing protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0069570 PE=4 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 2.656e-87
Identity = 154/213 (72.30%), Postives = 167/213 (78.40%), Query Frame = 0 
Query:    1 MSQLGAELQEP-QREPRTILGLLSEQMEG---GTRRRRTLKERFGFMGMGCCGATWGFRSHHDALSQTEREQQQ-----ERDP------ECVS-----PGMNLAAALAAERQLRGPQEEAVRAP---WRVSLMRLLEEAEA--EAETEQEQEKEKGGVAGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILHIF 188
            MSQLG  LQE  QREPRTILGLLS+QM+G   G RRR++ KERFGFMG+GCCGATWGFRS  DALS T+ EQQQ     E DP      +CV       GMNLAAALAAERQ+RGPQEE  RAP   WRVSLMRLLEE+E    A  E+E+E+EKG V GNDS+CCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEIL IF
Sbjct:    1 MSQLGVVLQESLQREPRTILGLLSDQMDGVESGARRRKSFKERFGFMGIGCCGATWGFRS--DALSFTQGEQQQQANHQETDPGQGSGLDCVDQGAAGSGMNLAAALAAERQIRGPQEEVGRAPGTPWRVSLMRLLEESEGGESAAVEKEKEEEKGDVVGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILDIF 211
[Close]
BLAST of Cc_v2.0_19465.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3VIK0|A0A1S3VIK0_VIGRR (Uncharacterized protein LOC106775427 OS=Vigna radiata var. radiata OX=3916 GN=LOC106775427 PE=4 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 4.267e-85
Identity = 149/211 (70.62%), Postives = 167/211 (79.15%), Query Frame = 0 
Query:    1 MSQLGAELQEP-QREPRTILGLLSEQMEG---GTRRRRTLKERFGFMGMGCCGATWGFRSHHDALSQTEREQQ---QERDP------ECV-----SPGMNLAAALAAERQLRGPQEEAVRAP---WRVSLMRLLEEAEA--EAETEQEQEKEKGGVAGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILHIF 188
            MSQLG  LQE  QREPRTILGLL +QM+G   G RR++T KERFGF+G+GCCGATWGFRSH  + +Q E++QQ   QE DP      +CV     + GMNLAAALAAERQ+RGPQEEA RAP   WRVSLMRLLEE+E    A  E+E+E+EK  V GNDS+CCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEIL IF
Sbjct:    1 MSQLGVVLQESLQREPRTILGLLRDQMDGVEPGARRKKTFKERFGFIGIGCCGATWGFRSHALSFTQGEQQQQANHQETDPGQGSALDCVDHGAAASGMNLAAALAAERQIRGPQEEAGRAPGTPWRVSLMRLLEESEGGESAAVEKEKEEEKVDVVGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILDIF 211
[Close]
BLAST of Cc_v2.0_19465.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445IV80|A0A445IV80_GLYSO (RING-type domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_022817 PE=4 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 1.386e-83
Identity = 158/202 (78.22%), Postives = 167/202 (82.67%), Query Frame = 0 
Query:    1 MSQLGAELQEPQREPR--TILGLLSEQMEG---GTRRRRTLKERFGFMGMGCCGATWGFRSHHDALS-QTEREQQQERDPECVSP-----GMNLAAALAAERQLRGPQEEAVRAP---WRVSLMRLLEEAEAEAETEQEQEKEKGGVAGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILHIF 188
            MSQLGA L+  QREPR  TILGLL+EQM+G   GTRRRR+ KERFGF+GMGCCGATWGFRS  DALS     +QQQE DPECV P     GMNLAAALAAERQLRGPQEEAVRAP   WRVSLMRLLEE EAE E E+E+E+    V GNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEIL IF
Sbjct:    1 MSQLGAVLRT-QREPRRSTILGLLTEQMDGVDSGTRRRRSFKERFGFIGMGCCGATWGFRS--DALSVTQGEQQQQETDPECVGPAGLGSGMNLAAALAAERQLRGPQEEAVRAPGTPWRVSLMRLLEETEAEKEKEKEKEEN---VVGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILDIF 196
[Close]
BLAST of Cc_v2.0_19465.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1KZW9|I1KZW9_SOYBN (RING-type domain-containing protein OS=Glycine max OX=3847 GN=100804292 PE=4 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 1.386e-83
Identity = 158/202 (78.22%), Postives = 167/202 (82.67%), Query Frame = 0 
Query:    1 MSQLGAELQEPQREPR--TILGLLSEQMEG---GTRRRRTLKERFGFMGMGCCGATWGFRSHHDALS-QTEREQQQERDPECVSP-----GMNLAAALAAERQLRGPQEEAVRAP---WRVSLMRLLEEAEAEAETEQEQEKEKGGVAGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILHIF 188
            MSQLGA L+  QREPR  TILGLL+EQM+G   GTRRRR+ KERFGF+GMGCCGATWGFRS  DALS     +QQQE DPECV P     GMNLAAALAAERQLRGPQEEAVRAP   WRVSLMRLLEE EAE E E+E+E+    V GNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEIL IF
Sbjct:    1 MSQLGAVLRT-QREPRRSTILGLLTEQMDGVDSGTRRRRSFKERFGFIGMGCCGATWGFRS--DALSVTQGEQQQQETDPECVGPAGLGSGMNLAAALAAERQLRGPQEEAVRAPGTPWRVSLMRLLEETEAEKEKEKEKEEN---VVGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILDIF 196
[Close]
BLAST of Cc_v2.0_19465.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86SJU8|A0AA86SJU8_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS19326 PE=4 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 5.617e-83
Identity = 151/209 (72.25%), Postives = 164/209 (78.47%), Query Frame = 0 
Query:    1 MSQLGAELQEP-QREPRTILGLLSEQMEG---GTRRRRTLKERFGFMGMGCCGATWGFRSHHDALSQTERE-----QQQERDP--ECVSP-----GMNLAAALAAERQLRGPQEEAVRAP---WRVSLMRLLEEAEA--EAETEQEQEKEKGGVAGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILHIF 188
            MSQL   LQE  QREPRTILGLL +QM+G   GTRRRRT KERFGF+GMGCCGA WGFRSH  + +  E++       QE DP   CV P     GMNLAAALAAERQ+RGPQEEA RAP   WRVSLMRLLEE+E    A  E+E+E+EKGGV GNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRE+WLNRGSCPLCNRSILEIL IF
Sbjct:    1 MSQLSVVLQESLQREPRTILGLLRDQMDGVDAGTRRRRTFKERFGFIGMGCCGAAWGFRSHELSFANEEQQQQQQPNHQETDPGLNCVGPSAAGSGMNLAAALAAERQIRGPQEEAGRAPGTPWRVSLMRLLEESEGGESAAVEKEKEEEKGGVVGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREVWLNRGSCPLCNRSILEILDIF 209
[Close]
BLAST of Cc_v2.0_19465.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445GS58|A0A445GS58_GLYSO (RING-type domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_040595 PE=4 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 9.708e-83
Identity = 150/209 (71.77%), Postives = 166/209 (79.43%), Query Frame = 0 
Query:    1 MSQLGAELQEP---QREPR-TILGLLSEQMEG---GTRRRRTLKERFGFMGMGCCGATWGFRSHHDALSQTEREQQQERDP------ECVSP-----GMNLAAALAAERQLRGPQEEA--VRAPWRVSLMRLLEEAEA-EAETEQEQEKEKGGVAGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILHIF 188
            MSQLG  LQE    QRE R TILGLL EQM+G   GTRRRR+LKERFGF+GMGCCGA+WGFRS   +++Q E+EQQQE DP      ECV P     GMNLAAALAAERQLR PQEE   VRAPWRVSLMRLLEE E  +A T +++++++  V GNDSVCCVCMGRKKGAA IPCGHTFCRVCSRELWLNRGSCPLCNRSILEIL IF
Sbjct:    1 MSQLGVALQESLRTQREARSTILGLLREQMDGVDGGTRRRRSLKERFGFIGMGCCGASWGFRSDALSVNQGEQEQQQETDPGRVAAPECVGPAGSGSGMNLAAALAAERQLRVPQEEGGGVRAPWRVSLMRLLEETEGGDAATAEKEKEKEENVLGNDSVCCVCMGRKKGAALIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILDIF 209
[Close]
BLAST of Cc_v2.0_19465.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1MFL5|I1MFL5_SOYBN (RING-type domain-containing protein OS=Glycine max OX=3847 GN=100804959 PE=4 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 9.708e-83
Identity = 150/209 (71.77%), Postives = 166/209 (79.43%), Query Frame = 0 
Query:    1 MSQLGAELQEP---QREPR-TILGLLSEQMEG---GTRRRRTLKERFGFMGMGCCGATWGFRSHHDALSQTEREQQQERDP------ECVSP-----GMNLAAALAAERQLRGPQEEA--VRAPWRVSLMRLLEEAEA-EAETEQEQEKEKGGVAGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILHIF 188
            MSQLG  LQE    QRE R TILGLL EQM+G   GTRRRR+LKERFGF+GMGCCGA+WGFRS   +++Q E+EQQQE DP      ECV P     GMNLAAALAAERQLR PQEE   VRAPWRVSLMRLLEE E  +A T +++++++  V GNDSVCCVCMGRKKGAA IPCGHTFCRVCSRELWLNRGSCPLCNRSILEIL IF
Sbjct:    1 MSQLGVALQESLRTQREARSTILGLLREQMDGVDGGTRRRRSLKERFGFIGMGCCGASWGFRSDALSVNQGEQEQQQETDPGRVAAPECVGPAGSGSGMNLAAALAAERQLRVPQEEGGGVRAPWRVSLMRLLEETEGGDAATAEKEKEKEENVLGNDSVCCVCMGRKKGAALIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILDIF 209
[Close]
BLAST of Cc_v2.0_19465.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6KKQ2|A0A4D6KKQ2_VIGUN (RING-type domain-containing protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG1g807 PE=4 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 6.402e-80
Identity = 156/217 (71.89%), Postives = 168/217 (77.42%), Query Frame = 0 
Query:    1 MSQLGAELQEP-QREPRTILGLLSEQM---EGGTRRRRTLKERFGFMGMGCCGATWGFRSHHDALSQTEREQQQ---------ERDP------ECVS-----PGMNLAAALAAERQLRGPQEEAVRAP---WRVSLMRLLEEAEA--EAETEQEQEKEKGGVAGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILHIF 188
            MSQLG  LQE  QREPRTILGLL +QM   EGG RRR+T KERFGF+G+GCCGATWGFRS  DALS ++ EQQQ         E DP      +CV       GMNLAAALAAERQ+RGPQEE  RAP   WRVSLMRLLEE+EA   A  E+E+E+EKGGV GNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEIL IF
Sbjct:    1 MSQLGVVLQESLQREPRTILGLLRDQMDGVEGGARRRKTFKERFGFIGIGCCGATWGFRS--DALSFSQGEQQQQHQQQANQQETDPGQGSGLDCVDHGAAGSGMNLAAALAAERQIRGPQEEVARAPGTPWRVSLMRLLEESEAGESAAVEKEKEEEKGGVVGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILDIF 215
[Close]
BLAST of Cc_v2.0_19465.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:1889576-1890205 FORWARD LENGTH=209)

HSP 1 Score: 189.119 bits (479), Expect = 4.820e-61
Identity = 115/213 (53.99%), Postives = 129/213 (60.56%), Query Frame = 0 
Query:    1 MSQLGAELQEPQRE---PRTILGLLSEQMEG---GTRRRRTLKERFGFMGMGCCGATWGFRSHHDALSQTEREQQQERDPECVS----------PGMNLAAALAAERQLRGPQEEAVRA--PWRVSLMRLLEEAEA-----EAETEQEQEKEKGGVAG--NDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILHIF 188
            MSQLG E  + Q E     T L LL  QM+G     RR+RTLKER GF  +GCCG TWG R      S T  +  +  +   VS           GMNLA ALAAER  R  + EA  +  P +VSLMRLLEE        E ETE+        V G  NDSVCCVCMGRKKGAAFIPCGHTFCRVCSRE+WLNRGSCPLCNR I+EIL I+
Sbjct:    1 MSQLGVETSQAQPETPQSTTFLDLLRLQMDGLDRSRRRKRTLKERLGFKRIGCCGPTWGLR----LTSNTGEDDDEPFENRLVSGSDHVTGPLNQGMNLATALAAERNYRTEETEASGSLTPLKVSLMRLLEETAERVVVEENETERVTASASSTVRGVNNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREVWLNRGSCPLCNRPIIEILDIY 209
[Close]
BLAST of Cc_v2.0_19465.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:11767685-11768329 REVERSE LENGTH=214)

HSP 1 Score: 183.341 bits (464), Expect = 1.281e-58
Identity = 106/192 (55.21%), Postives = 118/192 (61.46%), Query Frame = 0 
Query:   18 ILGLLSEQMEGG--TRRRRTLKERFGFMGMGCCGATWGFRSHHDAL--SQTEREQQQER----------DPECVSPGMNLAAALAAERQLRG--PQEEAVRAPWRVSLMRLLEEAEAEAETEQEQEKEK-----GGVAGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILHIF 188
             L LL  QM G   TRR+RTLKER  F  +GCCG TW  R  ++    S T R+ + E                  GMNLA AL AER  RG   + EA   P RVSLMRLLEE   +   +  +E E      G + GNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNR I+EIL IF
Sbjct:   23 FLDLLRRQMSGHDLTRRKRTLKERLRFKCIGCCGPTWNLRLTNNTTLHSPTSRDDEIEELQIETGLVLESDHGSGTGMNLATALEAERYNRGESTEAEADMTPRRVSLMRLLEETAEKIVDDDGKETEILTASIGTLTGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF 214
[Close]
BLAST of Cc_v2.0_19465.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:23072575-23073189 FORWARD LENGTH=204)

HSP 1 Score: 137.117 bits (344), Expect = 1.141e-40
Identity = 91/214 (42.52%), Postives = 120/214 (56.07%), Query Frame = 0 
Query:    1 MSQLGAELQEPQ---REPRTILGLLSE--QMEGGTR---RRRTLKERFGFMGMGCCGATWGFRSHH----------DALSQTEREQQQERDP------ECVSPGM--NLAAALAAERQLRGPQEEAVRAPWRVSLMRLLEEAEAEAETEQEQEKEKGGVAGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILHIF 188
            MSQLG  L+E +   R  RT++  L E  Q+ GG R   +  TLK+R  F  +GCCG     R             D   +++ +     DP      +C++ G   NLA ALA ER     +EE   A  +V LMRLL E++    T            GND +CCVCMGR+KGAAFIPCGHT+CRVCSRE+W+NRG+CPLCNRSI ++L ++
Sbjct:    1 MSQLGDLLRESEDGTRSERTMMMSLLEEDQINGGDRTMSKWTTLKQRLRFDWVGCCGKPLTLRLRQAETPIVVDDDDDEEESQNQVVDFSDPGTGTELDCLTRGSTRNLAEALAEERLAHVTEEET--AVTKVPLMRLLAESDGCDSTTT--------WLGNDPLCCVCMGREKGAAFIPCGHTYCRVCSREIWMNRGTCPLCNRSIFDVLDLY 204
[Close]
BLAST of Cc_v2.0_19465.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:9122650-9123402 FORWARD LENGTH=210)

HSP 1 Score: 117.857 bits (294), Expect = 3.811e-33
Identity = 61/115 (53.04%), Postives = 74/115 (64.35%), Query Frame = 0 
Query:   81 MNLAAALAAERQLRGPQEEAVRA----PWRVSLMRLLEEAEAE---AETEQEQEKEKGGVAGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILHIF 188
            + L A LA ER L   +EE        P R+SLM LLEE E +      + E E+E   V   +  CCVCM R KGAAFIPCGHTFCR+CSRELW+ RG+CPLCN +ILE+L +F
Sbjct:   96 IRLGAVLAEERALSAREEETPAEREVEPARMSLMELLEENEGQMSFVSVDGEAEEEVAAVTAAEISCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 210
[Close]
BLAST of Cc_v2.0_19465.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:9122650-9123402 FORWARD LENGTH=250)

HSP 1 Score: 117.857 bits (294), Expect = 1.259e-32
Identity = 61/115 (53.04%), Postives = 74/115 (64.35%), Query Frame = 0 
Query:   81 MNLAAALAAERQLRGPQEEAVRA----PWRVSLMRLLEEAEAE---AETEQEQEKEKGGVAGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILHIF 188
            + L A LA ER L   +EE        P R+SLM LLEE E +      + E E+E   V   +  CCVCM R KGAAFIPCGHTFCR+CSRELW+ RG+CPLCN +ILE+L +F
Sbjct:  136 IRLGAVLAEERALSAREEETPAEREVEPARMSLMELLEENEGQMSFVSVDGEAEEEVAAVTAAEISCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 250
[Close]
BLAST of Cc_v2.0_19465.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:9122650-9123402 FORWARD LENGTH=250)

HSP 1 Score: 117.857 bits (294), Expect = 1.259e-32
Identity = 61/115 (53.04%), Postives = 74/115 (64.35%), Query Frame = 0 
Query:   81 MNLAAALAAERQLRGPQEEAVRA----PWRVSLMRLLEEAEAE---AETEQEQEKEKGGVAGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILHIF 188
            + L A LA ER L   +EE        P R+SLM LLEE E +      + E E+E   V   +  CCVCM R KGAAFIPCGHTFCR+CSRELW+ RG+CPLCN +ILE+L +F
Sbjct:  136 IRLGAVLAEERALSAREEETPAEREVEPARMSLMELLEENEGQMSFVSVDGEAEEEVAAVTAAEISCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 250
[Close]
BLAST of Cc_v2.0_19465.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:9122650-9123402 FORWARD LENGTH=250)

HSP 1 Score: 117.857 bits (294), Expect = 1.259e-32
Identity = 61/115 (53.04%), Postives = 74/115 (64.35%), Query Frame = 0 
Query:   81 MNLAAALAAERQLRGPQEEAVRA----PWRVSLMRLLEEAEAE---AETEQEQEKEKGGVAGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILHIF 188
            + L A LA ER L   +EE        P R+SLM LLEE E +      + E E+E   V   +  CCVCM R KGAAFIPCGHTFCR+CSRELW+ RG+CPLCN +ILE+L +F
Sbjct:  136 IRLGAVLAEERALSAREEETPAEREVEPARMSLMELLEENEGQMSFVSVDGEAEEEVAAVTAAEISCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 250
[Close]
BLAST of Cc_v2.0_19465.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:7636547-7637507 REVERSE LENGTH=256)

HSP 1 Score: 107.071 bits (266), Expect = 1.642e-28
Identity = 60/122 (49.18%), Postives = 72/122 (59.02%), Query Frame = 0 
Query:   81 MNLAAALAAERQLRGPQEEAVRAPWRVSLMRLLEE-----AEAEAETEQEQEKEKGGVAGNDSV---------CCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILHIF 188
            + L   LAAER+           P R+SLM LLE+      E  A  E E E   G   G ++V         CCVCM R KGAAFIPCGHTFCR+CSRELW+ RG+CPLCN +IL++L IF
Sbjct:  146 LRLGTVLAAERE-----------PPRMSLMELLEDNDGHMYELSARDEVEVEGRDGCDGGGEAVAVTGAAELGCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTAILQVLDIF 256
[Close]
BLAST of Cc_v2.0_19465.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:7636547-7637507 REVERSE LENGTH=256)

HSP 1 Score: 107.071 bits (266), Expect = 1.642e-28
Identity = 60/122 (49.18%), Postives = 72/122 (59.02%), Query Frame = 0 
Query:   81 MNLAAALAAERQLRGPQEEAVRAPWRVSLMRLLEE-----AEAEAETEQEQEKEKGGVAGNDSV---------CCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILHIF 188
            + L   LAAER+           P R+SLM LLE+      E  A  E E E   G   G ++V         CCVCM R KGAAFIPCGHTFCR+CSRELW+ RG+CPLCN +IL++L IF
Sbjct:  146 LRLGTVLAAERE-----------PPRMSLMELLEDNDGHMYELSARDEVEVEGRDGCDGGGEAVAVTGAAELGCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTAILQVLDIF 256
[Close]
BLAST of Cc_v2.0_19465.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:7636547-7639037 REVERSE LENGTH=265)

HSP 1 Score: 106.686 bits (265), Expect = 2.693e-28
Identity = 60/122 (49.18%), Postives = 72/122 (59.02%), Query Frame = 0 
Query:   81 MNLAAALAAERQLRGPQEEAVRAPWRVSLMRLLEE-----AEAEAETEQEQEKEKGGVAGNDSV---------CCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILHIF 188
            + L   LAAER+           P R+SLM LLE+      E  A  E E E   G   G ++V         CCVCM R KGAAFIPCGHTFCR+CSRELW+ RG+CPLCN +IL++L IF
Sbjct:  155 LRLGTVLAAERE-----------PPRMSLMELLEDNDGHMYELSARDEVEVEGRDGCDGGGEAVAVTGAAELGCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTAILQVLDIF 265
The following BLAST results are available for this feature:
BLAST of Cc_v2.0_19465.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A151T6M0|A0A151T6M0_CAJCA3.911e-133100.00RING-type domain-containing protein OS=Cajanus caj... [more]
tr|A0A0S3S3U7|A0A0S3S3U7_PHAAN2.656e-8772.30RING-type domain-containing protein OS=Vigna angul... [more]
tr|A0A0L9VF28|A0A0L9VF28_PHAAN2.656e-8772.30RING-type domain-containing protein OS=Phaseolus a... [more]
tr|A0A1S3VIK0|A0A1S3VIK0_VIGRR4.267e-8570.62Uncharacterized protein LOC106775427 OS=Vigna radi... [more]
tr|A0A445IV80|A0A445IV80_GLYSO1.386e-8378.22RING-type domain-containing protein OS=Glycine soj... [more]
tr|I1KZW9|I1KZW9_SOYBN1.386e-8378.22RING-type domain-containing protein OS=Glycine max... [more]
tr|A0AA86SJU8|A0AA86SJU8_9FABA5.617e-8372.25Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|A0A445GS58|A0A445GS58_GLYSO9.708e-8371.77RING-type domain-containing protein OS=Glycine soj... [more]
tr|I1MFL5|I1MFL5_SOYBN9.708e-8371.77RING-type domain-containing protein OS=Glycine max... [more]
tr|A0A4D6KKQ2|A0A4D6KKQ2_VIGUN6.402e-8071.89RING-type domain-containing protein OS=Vigna ungui... [more]
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BLAST of Cc_v2.0_19465.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot )
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Cc_v2.0_19465.1 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
|4.820e-6153.99Symbols: no symbol available | no full name availa... [more]
|1.281e-5855.21Symbols: no symbol available | no full name availa... [more]
|1.141e-4042.52Symbols: no symbol available | no full name availa... [more]
|3.811e-3353.04Symbols: no symbol available | no full name availa... [more]
|1.259e-3253.04Symbols: no symbol available | no full name availa... [more]
|1.259e-3253.04Symbols: no symbol available | no full name availa... [more]
|1.259e-3253.04Symbols: no symbol available | no full name availa... [more]
|1.642e-2849.18Symbols: no symbol available | no full name availa... [more]
|1.642e-2849.18Symbols: no symbol available | no full name availa... [more]
|2.693e-2849.18Symbols: no symbol available | no full name availa... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 137..182
e-value: 2.3E-8
score: 45.0
NoneNo IPR availablePANTHERPTHR46629OS01G0917900 PROTEINcoord: 8..188
NoneNo IPR availableCDDcd16449RING-HCcoord: 140..177
e-value: 7.24348E-8
score: 45.1693
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 139..184
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 113..188
e-value: 8.6E-14
score: 52.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 140..178
score: 10.895954

Sequences
The following sequences are available for this feature:

mRNA sequence

>drCajCajn.Asha.2.0.Cc_v2.0_19465.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19465.1; Name=Cc_v2.0_19465.1; organism=Cajanus cajan; type=mRNA; length=567bp
ATGAGTCAACTGGGTGCGGAGCTGCAGGAACCGCAGAGGGAACCGAGGAC
CATTCTGGGGCTCTTATCGGAACAAATGGAGGGAGGCACACGCAGGAGGC
GCACCTTGAAGGAACGGTTCGGGTTCATGGGCATGGGTTGCTGCGGGGCC
ACATGGGGGTTCCGCTCTCACCATGACGCTCTCAGCCAGACGGAGAGAGA
GCAGCAGCAGGAAAGGGATCCGGAGTGCGTGAGCCCGGGCATGAATCTGG
CGGCCGCGTTAGCGGCGGAGAGGCAGCTCCGTGGGCCGCaggaggaggcg
gtgagggcgccgtggagggtgtcgctgatgaggctgctggaggaggcgga
ggcggaggcggagacggagcaggaacaggagaaggagaagggaggGGTTG
CGGGGAATGATTCGGTGTGCTGCGTCTGCATGGGGAGGAAGAAAGGCGCG
GCCTTCATCCCATGTGGCCACACTTTTTGCAGGGTGTGTTCCAGGGAACT
GTGGCTCAATCGAGGCTCCTGTCCCCTCTGCAATCGTTCCATCCTCGAGA
TTCTCCACATTTTCTAG
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protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_19465.1

>drCajCajn.Asha.2.0.Cc_v2.0_19465.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19465.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_19465.1; organism=Cajanus cajan; type=polypeptide; length=188bp
MSQLGAELQEPQREPRTILGLLSEQMEGGTRRRRTLKERFGFMGMGCCGA
TWGFRSHHDALSQTEREQQQERDPECVSPGMNLAAALAAERQLRGPQEEA
VRAPWRVSLMRLLEEAEAEAETEQEQEKEKGGVAGNDSVCCVCMGRKKGA
AFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILHIF
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mRNA from alignment at CcLG08_v2.0:53336921..53338162+

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drCajCajn.Asha.2.0.Cc_v2.0_19465.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19465.1; Name=Cc_v2.0_19465.1; organism=Cajanus cajan; type=mRNA; length=1242bp; location=Sequence derived from: CcLG08_v2.0:53336921..53338162+ (Cajanus cajan
AGAGAATCCTAATCCCTGAGATACACGGAAGAGGGCATGAGCCATTTGGA
TTTTGGCCTAAACTAAACGTTGGTTCTCGTGCCGGCGGTTTCAACGGCTT
TTGACTTTAGTTACAAAAAATCCGGCCATCATACGTATGCAAATACATAA
TTACAAGAGTAATAGGACTGCTCAACTTGCCAGACTATATTTCAATTCAT
TTTTTATTGGGTAACTAGGTGTGCACAAGAAATTATCTTAAACATTTGAA
AAAGTAGAATAAAGCATTGATTTAATGAAAAAAGAATAGAGAGAGTGTGT
GTAAACCCTTGTTGGGTGTTTAGTCCCAAGTGTCATAGGTGGTGTGTTAT
TAATTAAACGGGGCATTCCATTATTCATTCCAATTGTAAGTGGCTTTTCC
ATGGAAGCCTGTAAGGCTCTCCCGTTATAAATCACGAGATCTCTGTGGCC
CTCGCACACACCTCAATGTCCGTCTCTTAACTAATTTGGTTTCCGTTAGG
TACTACTATGAGTCAACTGGGTGCGGAGCTGCAGGAACCGCAGAGGGAAC
CGAGGACCATTCTGGGGCTCTTATCGGAACAAATGGAGGGAGGCACACGC
AGGAGGCGCACCTTGAAGGAACGGTTCGGGTTCATGGGCATGGGTTGCTG
CGGGGCCACATGGGGGTTCCGCTCTCACCATGACGCTCTCAGCCAGACGG
AGAGAGAGCAGCAGCAGGAAAGGGATCCGGAGTGCGTGAGCCCGGGCATG
AATCTGGCGGCCGCGTTAGCGGCGGAGAGGCAGCTCCGTGGGCCGCagga
ggaggcggtgagggcgccgtggagggtgtcgctgatgaggctgctggagg
aggcggaggcggaggcggagacggagcaggaacaggagaaggagaaggga
ggGGTTGCGGGGAATGATTCGGTGTGCTGCGTCTGCATGGGGAGGAAGAA
AGGCGCGGCCTTCATCCCATGTGGCCACACTTTTTGCAGGGTGTGTTCCA
GGGAACTGTGGCTCAATCGAGGCTCCTGTCCCCTCTGCAATCGTTCCATC
CTCGAGATTCTCCACATTTTCTAGAAATTCAAATTCATTCTCTTCAATCC
CATTCCCATTCTTGCCCTTTCTTTTTCTCTTTATCATTCGCCACCTGTAA
TATCAATTTCCTTTATTTCTTATTTCTTATGTCTACAAATCTTCTATCAT
CTTTATCTCTTGTACATGCCACTACATCACTATATGCCTATG
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Coding sequence (CDS) from alignment at CcLG08_v2.0:53336921..53338162+

>drCajCajn.Asha.2.0.Cc_v2.0_19465.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19465.1; Name=Cc_v2.0_19465.1; organism=Cajanus cajan; type=CDS; length=567bp; location=Sequence derived from: CcLG08_v2.0:53336921..53338162+ (Cajanus cajan
ATGAGTCAACTGGGTGCGGAGCTGCAGGAACCGCAGAGGGAACCGAGGAC
CATTCTGGGGCTCTTATCGGAACAAATGGAGGGAGGCACACGCAGGAGGC
GCACCTTGAAGGAACGGTTCGGGTTCATGGGCATGGGTTGCTGCGGGGCC
ACATGGGGGTTCCGCTCTCACCATGACGCTCTCAGCCAGACGGAGAGAGA
GCAGCAGCAGGAAAGGGATCCGGAGTGCGTGAGCCCGGGCATGAATCTGG
CGGCCGCGTTAGCGGCGGAGAGGCAGCTCCGTGGGCCGCaggaggaggcg
gtgagggcgccgtggagggtgtcgctgatgaggctgctggaggaggcgga
ggcggaggcggagacggagcaggaacaggagaaggagaagggaggGGTTG
CGGGGAATGATTCGGTGTGCTGCGTCTGCATGGGGAGGAAGAAAGGCGCG
GCCTTCATCCCATGTGGCCACACTTTTTGCAGGGTGTGTTCCAGGGAACT
GTGGCTCAATCGAGGCTCCTGTCCCCTCTGCAATCGTTCCATCCTCGAGA
TTCTCCACATTTTCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING