Vigan.04G340500.01

Transcript Overview
NameVigan.04G340500.01
Unique NamedrVigAngu.Shumari.1.0.Vigan.04G340500.01
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length555
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr04chromosomeChr04:46210308..46211935 +Vigna angularis cv. Shumari genome v1.a1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
avjvasL052Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvasL300Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvasL307Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvasL379Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvasL520Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvasL036Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
pvvasL040Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
carvasL203Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
psvasL225Pisum sativum Cameor genome v1aPisum sativum
psvasL236Pisum sativum Cameor genome v1aPisum sativum
vasvasR216Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvasR244Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvasR252Vigna angularis cv. Shumari genome v1.a1Vigna angularis
carvasL323Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
carvasL328Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
psvasL482Pisum sativum Cameor genome v1aPisum sativum
pvvasL531Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvasL624Pisum sativum Cameor genome v1aPisum sativum
pvvasL672Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvasL680Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vasvfhR399Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vasvfhR421Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vasvfhR428Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vasvfhR446Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vasvrvR349Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vasvrvR361Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vasvuR324Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vasvumR338Vigna umbellata FF25 genome v1.0Vigna umbellata
vasvuR367Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vasvumR346Vigna umbellata FF25 genome v1.0Vigna umbellata
vasvuR375Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vasvuR387Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vasvumR382Vigna umbellata FF25 genome v1.0Vigna umbellata
vasvumR394Vigna umbellata FF25 genome v1.0Vigna umbellata

Orthologs
Gene/TranscriptAssemblySpecies
Vum_04G02475.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-XM_022779259.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigun01g169300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Phvul.001G186500.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Va03G074330.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigan.04G340500drVigAngu.Shumari.1.0.Vigan.04G340500Vigna angularisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
nbis-exon-66104drVigAngu.Shumari.1.0.nbis-exon-66104Vigna angularisexon
nbis-exon-66105drVigAngu.Shumari.1.0.nbis-exon-66105Vigna angularisexon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
five_prime_utr-14434drVigAngu.Shumari.1.0.five_prime_utr-14434Vigna angularisfive_prime_UTR
five_prime_utr-14435drVigAngu.Shumari.1.0.five_prime_utr-14435Vigna angularisfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-61900drVigAngu.Shumari.1.0.cds-61900Vigna angularisCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
three_prime_utr-13771drVigAngu.Shumari.1.0.three_prime_utr-13771Vigna angularisthree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drVigAngu.Shumari.1.0.Vigan.04G340500.01drVigAngu.Shumari.1.0.Vigan.04G340500.01Vigna angularispolypeptide
drVigAngu.Shumari.1.0.Vigan.04G340500.01drVigAngu.Shumari.1.0.Vigan.04G340500.01-proteinVigna angularispolypeptide


Homology
[Close]
BLAST of Vigan.04G340500.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3RZ13|A0A0S3RZ13_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G340500 PE=4 SV=1)

HSP 1 Score: 370.548 bits (950), Expect = 1.672e-129
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0 
Query:    1 MENARKVEEQAAQVPVVPTIATTPFMPIIPTPVPIWTPEMANQFYSHSNGIPAGFDLPPFPEISNWPNHRLEPSPFAHHNAANRVQISFDSFPSSSNGIGIPQLLTQPDLPLAYSAVTNEGQFVPPYNSQFIPTTYTSFHHHQLLGVEQPFLNTIHNQYTELPGKSNNFFIYLASSSHFIKIFI 184
            MENARKVEEQAAQVPVVPTIATTPFMPIIPTPVPIWTPEMANQFYSHSNGIPAGFDLPPFPEISNWPNHRLEPSPFAHHNAANRVQISFDSFPSSSNGIGIPQLLTQPDLPLAYSAVTNEGQFVPPYNSQFIPTTYTSFHHHQLLGVEQPFLNTIHNQYTELPGKSNNFFIYLASSSHFIKIFI
Sbjct:    1 MENARKVEEQAAQVPVVPTIATTPFMPIIPTPVPIWTPEMANQFYSHSNGIPAGFDLPPFPEISNWPNHRLEPSPFAHHNAANRVQISFDSFPSSSNGIGIPQLLTQPDLPLAYSAVTNEGQFVPPYNSQFIPTTYTSFHHHQLLGVEQPFLNTIHNQYTELPGKSNNFFIYLASSSHFIKIFI 184
[Close]
BLAST of Vigan.04G340500.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A3Q0EUZ2|A0A3Q0EUZ2_VIGRR (Uncharacterized protein LOC111241409 OS=Vigna radiata var. radiata OX=3916 GN=LOC111241409 PE=4 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 4.447e-96
Identity = 148/170 (87.06%), Postives = 155/170 (91.18%), Query Frame = 0 
Query:    3 NARKVEEQAAQVPVVPTIATT-PFMPIIPTPVPIWTPEMANQFYSHSNGIPAGFDLPPFPEISNWPNHRLEPSPFAHHNAANRVQISFDSFPSSSNGIGIPQLLTQPDLPLAYSAVTNEGQFVPPYNSQFIPTTYTSFHHHQLLGVEQPFLNTIHNQYTELPGKSNNFFI 171
            NA KVEEQAAQVPVVPTIATT P MP+IPTPVPIWTPEMANQF+SHSNGIPAGFDL  +PEISNWPNHR EPSPFAHHNAANRVQISFDSFPSSSN  GIPQLLTQPDLPL YSAVTNEGQF+PPY+SQFIP TYTSF+HHQLLGVEQP LNTIHNQY ELPGK   FF+
Sbjct:    7 NASKVEEQAAQVPVVPTIATTTPLMPVIPTPVPIWTPEMANQFHSHSNGIPAGFDLSAYPEISNWPNHRSEPSPFAHHNAANRVQISFDSFPSSSN--GIPQLLTQPDLPLPYSAVTNEGQFIPPYDSQFIP-TYTSFNHHQLLGVEQPLLNTIHNQYAELPGKC--FFL 171
[Close]
BLAST of Vigan.04G340500.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6M9P1|A0A4D6M9P1_VIGUN (Endonuclease III OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g2730 PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.651e-63
Identity = 122/190 (64.21%), Postives = 136/190 (71.58%), Query Frame = 0 
Query:    3 NARKVEEQAAQVPVVPTIATTPFMPIIPT----PVPIWTPEMANQFYSHSNGIPAGFDLPPFPEISNWPNHRLEPSPFAHHNAANRVQISFDSFPSSSNGIGIPQLLTQPDLPL---------AYSAVTNE---GQFVPPYNSQFIPTTYTSFHHHQLLGVEQPFLNTIHNQYTELPGKSNNFFIYLASS 176
            N  KVEEQAAQVP +PT+   P +P +PT    PVPIWTPEMANQF SHSNGIPAGFD   FPEISNWP HR EP+PF+H   AN VQISFD FPSSSNGI   QLLTQ ++PL         AYSA TNE    QF+PPYNSQFIP  Y+SF HHQ LGVEQPF NTI NQY +LPG S  +F Y + +
Sbjct:    7 NKSKVEEQAAQVPTIPTVPIIPTVPTVPTMIPRPVPIWTPEMANQFVSHSNGIPAGFDFSAFPEISNWPIHRYEPAPFSHLATANGVQISFDGFPSSSNGIS--QLLTQSEVPLAPLAPLAPSAYSAATNEDLLSQFIPPYNSQFIP-NYSSFGHHQFLGVEQPFPNTIRNQYEDLPGSS--YFDYCSKT 191
[Close]
BLAST of Vigan.04G340500.01 vs. ExPASy TrEMBL (2024)
Match: tr|V7CXE1|V7CXE1_PHAVU (HhH-GPD domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G186500g PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.661e-49
Identity = 100/177 (56.50%), Postives = 118/177 (66.67%), Query Frame = 0 
Query:    3 NARKVEEQAAQVPVVPTIATTPFMPIIPTPVPIWTPEMANQFYSHSNGIPAGFDLPPFPEISNWPNHRLEPSPFAHHNAANRVQISFDSFPSSSNGIGIPQLLTQPDLPLAYSAVTNE---GQFVPPYNSQFIPTTYTSFHHHQLLGVEQPFLNTIHNQYTELPGKSNNFFIYLASS 176
            + RK+++Q    P    I TTPF PI P PVPIWTPEM N  YSH NGIPAGF + P+P+I+NWP HR EP+ F HHNA    QISF++FPSSSNGI   +L  Q D+P AYS VTNE    QF+PPYN Q  P +Y SF HHQ L +EQP  NTIHNQY  L G S  +F Y   +
Sbjct:    7 DRRKLQQQPPGFP----IPTTPFNPIAPMPVPIWTPEMGNHLYSHFNGIPAGFHVSPYPDINNWPFHRSEPAVFPHHNAQTAPQISFEAFPSSSNGIA--ELFAQTDIPFAYSNVTNEELLSQFIPPYNLQCNP-SYASFDHHQ-LSLEQPLANTIHNQYQGLLGSS--YFDYCGKT 173
[Close]
BLAST of Vigan.04G340500.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86RQA3|A0AA86RQA3_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS2847 PE=4 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.118e-40
Identity = 88/168 (52.38%), Postives = 106/168 (63.10%), Query Frame = 0 
Query:    5 RKVEEQAAQVPVVPTIATTPFMPIIPTPVPIWTPEMANQFYSHSNGIPAGFDLPPFPEISNWPNHRLEPSPFAHHNAANRVQISFDSFPSSSNGIGIPQLLTQPDLPLAYSAVTNE---GQFVPPYNSQFIPTTYTSFHHHQLLGVEQPFLNTIHNQYTELPGKSNNF 169
            RK+++    VPV      TP  PI+  P+PIWTPE+  Q + HSNGI A FD     E++NWP HR EP   AHHNA   +  SFD  PSSSN I   +L T  D P A+  VTNE    QFV PY+ QF P T+TSF HH LL +EQPF+N IHNQY +LPGK+N F
Sbjct:    9 RKLQDTPPWVPV----PATPLKPIVSRPMPIWTPEVGKQLFYHSNGIHAVFDPSASAEMNNWPLHRSEPPALAHHNAKTPLHTSFD-IPSSSNSIA--ELWTGADNPFAFFNVTNEELLNQFVSPYHPQFNP-TFTSFDHHPLLPLEQPFVNPIHNQYPDLPGKNNQF 168
[Close]
BLAST of Vigan.04G340500.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0R0KV35|A0A0R0KV35_SOYBN (Protein ROS1 OS=Glycine max OX=3847 GN=GLYMA_03G190800 PE=4 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.096e-36
Identity = 83/169 (49.11%), Postives = 102/169 (60.36%), Query Frame = 0 
Query:   12 AQVPVVPTIATTPFMPIIPTPVPIWTPEMANQFYSHSNGIPAGFDLPPFPEISNWPNHRLEPSPFAHHNAANRVQISFDSFPSSSNGIGIPQLLTQPDLPLAYSAVTNEG---QFVPPYNSQFIPT-TYTSFHHHQLLGVEQPFLNTIHNQYTELPGKSNNFFIYLASS 176
             QVP VPT   TP MPI+P P PIWTP   N  YSHSNG+ A F+     EI+NW + R EP   A+ NA  RV ISFD  PSSSNGI   +LLTQ D P AYS  T+ G   QF   +N+QF P  TY    H   L  E+PF+NT+H+Q+ +L G S  +F Y + +
Sbjct:   13 GQVPWVPT---TPLMPILPKPGPIWTPMEGNHLYSHSNGLTACFEPSCCAEINNWSHPRSEPVVLAYGNAKTRVPISFDEIPSSSNGIA--ELLTQGDAPSAYSNATHAGFFNQFAHAFNAQFNPHPTYALLSHQYHLSREEPFVNTVHDQFQDLQGTS--YFSYCSKT 174
[Close]
BLAST of Vigan.04G340500.01 vs. ExPASy TrEMBL (2024)
Match: tr|K7KFY4|K7KFY4_SOYBN (HhH-GPD domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_03G190800 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 3.392e-36
Identity = 83/169 (49.11%), Postives = 102/169 (60.36%), Query Frame = 0 
Query:   12 AQVPVVPTIATTPFMPIIPTPVPIWTPEMANQFYSHSNGIPAGFDLPPFPEISNWPNHRLEPSPFAHHNAANRVQISFDSFPSSSNGIGIPQLLTQPDLPLAYSAVTNEG---QFVPPYNSQFIPT-TYTSFHHHQLLGVEQPFLNTIHNQYTELPGKSNNFFIYLASS 176
             QVP VPT   TP MPI+P P PIWTP   N  YSHSNG+ A F+     EI+NW + R EP   A+ NA  RV ISFD  PSSSNGI   +LLTQ D P AYS  T+ G   QF   +N+QF P  TY    H   L  E+PF+NT+H+Q+ +L G S  +F Y + +
Sbjct:   13 GQVPWVPT---TPLMPILPKPGPIWTPMEGNHLYSHSNGLTACFEPSCCAEINNWSHPRSEPVVLAYGNAKTRVPISFDEIPSSSNGIA--ELLTQGDAPSAYSNATHAGFFNQFAHAFNAQFNPHPTYALLSHQYHLSREEPFVNTVHDQFQDLQGTS--YFSYCSKT 174
[Close]
BLAST of Vigan.04G340500.01 vs. ExPASy TrEMBL (2024)
Match: tr|K7KFY3|K7KFY3_SOYBN (HhH-GPD domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_03G190800 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 3.469e-36
Identity = 83/169 (49.11%), Postives = 102/169 (60.36%), Query Frame = 0 
Query:   12 AQVPVVPTIATTPFMPIIPTPVPIWTPEMANQFYSHSNGIPAGFDLPPFPEISNWPNHRLEPSPFAHHNAANRVQISFDSFPSSSNGIGIPQLLTQPDLPLAYSAVTNEG---QFVPPYNSQFIPT-TYTSFHHHQLLGVEQPFLNTIHNQYTELPGKSNNFFIYLASS 176
             QVP VPT   TP MPI+P P PIWTP   N  YSHSNG+ A F+     EI+NW + R EP   A+ NA  RV ISFD  PSSSNGI   +LLTQ D P AYS  T+ G   QF   +N+QF P  TY    H   L  E+PF+NT+H+Q+ +L G S  +F Y + +
Sbjct:   13 GQVPWVPT---TPLMPILPKPGPIWTPMEGNHLYSHSNGLTACFEPSCCAEINNWSHPRSEPVVLAYGNAKTRVPISFDEIPSSSNGIA--ELLTQGDAPSAYSNATHAGFFNQFAHAFNAQFNPHPTYALLSHQYHLSREEPFVNTVHDQFQDLQGTS--YFSYCSKT 174
[Close]
BLAST of Vigan.04G340500.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445LDR9|A0A445LDR9_GLYSO (Protein ROS1 isoform C OS=Glycine soja OX=3848 GN=D0Y65_007609 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 3.502e-36
Identity = 83/169 (49.11%), Postives = 102/169 (60.36%), Query Frame = 0 
Query:   12 AQVPVVPTIATTPFMPIIPTPVPIWTPEMANQFYSHSNGIPAGFDLPPFPEISNWPNHRLEPSPFAHHNAANRVQISFDSFPSSSNGIGIPQLLTQPDLPLAYSAVTNEG---QFVPPYNSQFIPT-TYTSFHHHQLLGVEQPFLNTIHNQYTELPGKSNNFFIYLASS 176
             QVP VPT   TP MPI+P P PIWTP   N  YSHSNG+ A F+     EI+NW + R EP   A+ NA  RV ISFD  PSSSNGI   +LLTQ D P AYS  T+ G   QF   +N+QF P  TY    H   L  E+PF+NT+H+Q+ +L G S  +F Y + +
Sbjct:   13 GQVPWVPT---TPLMPILPKPGPIWTPMEGNHLYSHSNGLTACFEPSCCAEINNWSHPRSEPVVLAYGNAKTRVPISFDEIPSSSNGIA--ELLTQGDAPSAYSNATHAGFFNQFAHAFNAQFNPHPTYALLSHQYHLSREEPFVNTVHDQFQDLQGTS--YFSYCSKA 174
[Close]
BLAST of Vigan.04G340500.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445LE40|A0A445LE40_GLYSO (Protein ROS1 isoform A OS=Glycine soja OX=3848 GN=D0Y65_007609 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 3.644e-36
Identity = 83/169 (49.11%), Postives = 102/169 (60.36%), Query Frame = 0 
Query:   12 AQVPVVPTIATTPFMPIIPTPVPIWTPEMANQFYSHSNGIPAGFDLPPFPEISNWPNHRLEPSPFAHHNAANRVQISFDSFPSSSNGIGIPQLLTQPDLPLAYSAVTNEG---QFVPPYNSQFIPT-TYTSFHHHQLLGVEQPFLNTIHNQYTELPGKSNNFFIYLASS 176
             QVP VPT   TP MPI+P P PIWTP   N  YSHSNG+ A F+     EI+NW + R EP   A+ NA  RV ISFD  PSSSNGI   +LLTQ D P AYS  T+ G   QF   +N+QF P  TY    H   L  E+PF+NT+H+Q+ +L G S  +F Y + +
Sbjct:   13 GQVPWVPT---TPLMPILPKPGPIWTPMEGNHLYSHSNGLTACFEPSCCAEINNWSHPRSEPVVLAYGNAKTRVPISFDEIPSSSNGIA--ELLTQGDAPSAYSNATHAGFFNQFAHAFNAQFNPHPTYALLSHQYHLSREEPFVNTVHDQFQDLQGTS--YFSYCSKA 174
The following BLAST results are available for this feature:
BLAST of Vigan.04G340500.01 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-13 (Blastp of Vigna angularis cv. Shumari v1.a1 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A0S3RZ13|A0A0S3RZ13_PHAAN1.672e-129100.00Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A3Q0EUZ2|A0A3Q0EUZ2_VIGRR4.447e-9687.06Uncharacterized protein LOC111241409 OS=Vigna radi... [more]
tr|A0A4D6M9P1|A0A4D6M9P1_VIGUN2.651e-6364.21Endonuclease III OS=Vigna unguiculata OX=3917 GN=D... [more]
tr|V7CXE1|V7CXE1_PHAVU6.661e-4956.50HhH-GPD domain-containing protein OS=Phaseolus vul... [more]
tr|A0AA86RQA3|A0AA86RQA3_9FABA1.118e-4052.38Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|A0A0R0KV35|A0A0R0KV35_SOYBN2.096e-3649.11Protein ROS1 OS=Glycine max OX=3847 GN=GLYMA_03G19... [more]
tr|K7KFY4|K7KFY4_SOYBN3.392e-3649.11HhH-GPD domain-containing protein OS=Glycine max O... [more]
tr|K7KFY3|K7KFY3_SOYBN3.469e-3649.11HhH-GPD domain-containing protein OS=Glycine max O... [more]
tr|A0A445LDR9|A0A445LDR9_GLYSO3.502e-3649.11Protein ROS1 isoform C OS=Glycine soja OX=3848 GN=... [more]
tr|A0A445LE40|A0A445LE40_GLYSO3.644e-3649.11Protein ROS1 isoform A OS=Glycine soja OX=3848 GN=... [more]
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BLAST of Vigan.04G340500.01 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-13 (Blastp of Vigna angularis cv. Shumari v1.a1 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Vigan.04G340500.01 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-13 (Blastp of Vigna angularis cv. Shumari v1.a1 proteins vs arabidopsis Araport11)
Total hits: 0
Match NameE-valueIdentityDescription
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Sequences
The following sequences are available for this feature:

mRNA sequence

>drVigAngu.Shumari.1.0.Vigan.04G340500.01 ID=drVigAngu.Shumari.1.0.Vigan.04G340500.01; Name=Vigan.04G340500.01; organism=Vigna angularis; type=mRNA; length=555bp
ATGGAAAACGCAAGGAAGGTTGAGGAGCAGGCTGCTCAGGTCCCCGTCGT
CCCCACCATCGCCACCACCCCTTTCATGCCCATCATTCCGACGCCAGTGC
CGATCTGGACTCCTGAGATGGCAAACCAGTTCTATTCTCATTCCAATGGG
ATACCTGCTGGTTTTGATCTTCCACCATTTCCAGAGATAAGCAACTGGCC
TAACCACCGCTTGGAGCCTTCCCCTTTCGCCCATCACAATGCCGCAAATC
GCGTTCAAATATCTTTTGACAGCTTTCCCAGTTCAAGTAACGGCATAGGC
ATTCCTCAACTTTTGACCCAGCCAGACCTTCCGTTGGCATATTCTGCTGT
AACAAATGAAGGCCAATTTGTTCCGCCGTATAATTCACAGTTCATCCCGA
CGACCTATACATCTTTCCATCATCATCAACTTCTCGGTGTGGAGCAACCG
TTTCTCAATACTATCCATAACCAGTATACAGAGCTTCCGGGTAAGAGCAA
TAATTTTTTTATATATTTAGCGTCGTCGTCGCATTTTATTAAAATTTTCA
TTTGA
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protein sequence of drVigAngu.Shumari.1.0.Vigan.04G340500.01

>drVigAngu.Shumari.1.0.Vigan.04G340500.01 ID=drVigAngu.Shumari.1.0.Vigan.04G340500.01; Name=drVigAngu.Shumari.1.0.Vigan.04G340500.01; organism=Vigna angularis; type=polypeptide; length=185bp
MENARKVEEQAAQVPVVPTIATTPFMPIIPTPVPIWTPEMANQFYSHSNG
IPAGFDLPPFPEISNWPNHRLEPSPFAHHNAANRVQISFDSFPSSSNGIG
IPQLLTQPDLPLAYSAVTNEGQFVPPYNSQFIPTTYTSFHHHQLLGVEQP
FLNTIHNQYTELPGKSNNFFIYLASSSHFIKIFI*
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mRNA from alignment at Chr04:46210308..46211935+

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drVigAngu.Shumari.1.0.Vigan.04G340500.01 ID=drVigAngu.Shumari.1.0.Vigan.04G340500.01; Name=Vigan.04G340500.01; organism=Vigna angularis; type=mRNA; length=1628bp; location=Sequence derived from: Chr04:46210308..46211935+ (Vigna angularis
TCTGGAAGGGGAATAGAAGTAATAAAGTAAAATAAAATAGCTCAGGCTGC
ATATGCAAGCTCATAGAAATTCGTGTAGGTTCTCTCTTTCCTTCTCTCTC
ACATTCGGTGGAAATGTTATATATATATCCCATTAGTTGCCGCATATAGA
TATCTGAAATCAGATTTCCGGCATTGACTCGATAAATCTACCTTAACAGC
ATCCGCACGAATCTCTCCGATTTTCTACTTCAACTTCGGTTTTGGTCGCG
TGAAAGTTCCTATTCATCGCGAGCAGAAAGCGGAGGTAGCAACTAGAATA
AGCGAATATTGTTTATCGTGAGAAGTCTTCTTTCCAACACTCTCCATAGA
CAGGtttggaattttaattttaattaatttctttaaatttcagtaattac
atcttgaccaccaggtttgtcagtcaccggttactttcaggaggtaattc
agaaactcacctcgtttaatgttgaaaaactgcatatatcttctctactt
tatttttgttatttattgatctctgtttTCCGAAACCACTTACATTTTCC
GCTGGCAGGTTTGTCCCCGAAAATAGACCTTTTATTCTTCGGGACATCTC
TCTAGAATAGCTTCACAAAATCCTTTTGTTAAGTCCTTTTTGCAGAAATC
CTTTTGCTGAGTCCTTTTGCACAAGGATTTTTTTTCCAGTTCTAAGTGAA
AGTTCTAAAGCAAGTCAAAATGGAAAACGCAAGGAAGGTTGAGGAGCAGG
CTGCTCAGGTCCCCGTCGTCCCCACCATCGCCACCACCCCTTTCATGCCC
ATCATTCCGACGCCAGTGCCGATCTGGACTCCTGAGAtggcaaaccagtt
ctattctcattccaatgggatacctgctggttttgATCTTCCACCATTTC
CAGAGATAAGCAACTGGCCTAACCACCGCTTGGAGCCTTCCCCTTTCGCC
CATCACAATGCCGCAAATCGCGTTCAAATATCTTTTGACAGCTTTCCCAG
TTCAAGTAACGGCATAGGCATTCCTCAACTTTTGACCCAGCCAGACCTTC
CGTTGGCATATTCTGCTGTAACAAATGAAGGCCAATTTGTTCCGCCGTAT
AATTCACAGTTCATCCCGACGACCTATACATCTTTCCATCATCATCAACT
TCTCGGTGTGGAGCAACCGTTTCTCAATACTATCCATAACCAGTATACAG
AGCTTCCGGGTAAGAGCAATAAtttttttatatatttagcgtcgtcgtcg
cattttattaaaattTTCATTTGAGCGTGCACTAGCACTTGGCCGGTCTC
CATTACCGGCAATGGGGAACTGATCTTCAGCAGTCATATTAAACACTTCA
GATGATTTTAACCATTATGTTTTATTAATCTAATTGTTTTTGTCATCAAA
TGAAAATTTTAAAAATTCAATATATAGATTAAATACTTTAGAGGGTTATG
ACTTTGCTCCATCCCCGCAATGTGCAACAGCTGAACAAAGTAAAACCCGT
ATTTTCAAAATTGAAATGTAACATTTGATACCGTTAAGGATGGTGCCATA
AAATTAGATGTTTGAACTAAACAGCTGTAACGAACATGTGGATCCTCTGC
TGCATTTAACGCCAAAATTCTCCTCCAT
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Coding sequence (CDS) from alignment at Chr04:46210308..46211935+

>drVigAngu.Shumari.1.0.Vigan.04G340500.01 ID=drVigAngu.Shumari.1.0.Vigan.04G340500.01; Name=Vigan.04G340500.01; organism=Vigna angularis; type=CDS; length=555bp; location=Sequence derived from: Chr04:46210308..46211935+ (Vigna angularis
ATGGAAAACGCAAGGAAGGTTGAGGAGCAGGCTGCTCAGGTCCCCGTCGT
CCCCACCATCGCCACCACCCCTTTCATGCCCATCATTCCGACGCCAGTGC
CGATCTGGACTCCTGAGAtggcaaaccagttctattctcattccaatggg
atacctgctggttttgATCTTCCACCATTTCCAGAGATAAGCAACTGGCC
TAACCACCGCTTGGAGCCTTCCCCTTTCGCCCATCACAATGCCGCAAATC
GCGTTCAAATATCTTTTGACAGCTTTCCCAGTTCAAGTAACGGCATAGGC
ATTCCTCAACTTTTGACCCAGCCAGACCTTCCGTTGGCATATTCTGCTGT
AACAAATGAAGGCCAATTTGTTCCGCCGTATAATTCACAGTTCATCCCGA
CGACCTATACATCTTTCCATCATCATCAACTTCTCGGTGTGGAGCAACCG
TTTCTCAATACTATCCATAACCAGTATACAGAGCTTCCGGGTAAGAGCAA
TAAtttttttatatatttagcgtcgtcgtcgcattttattaaaattTTCA
TTTGA
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