PvulFLAVERTChr01.1322
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of PvulFLAVERTChr01.1322 vs. ExPASy TrEMBL (2024)
Match: tr|V7CY53|V7CY53_PHAVU (Large ribosomal subunit protein uL15/eL18 domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G208200g PE=3 SV=1) HSP 1 Score: 374.785 bits (961), Expect = 4.148e-131 Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0 Query: 1 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKENKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRAKGRKFERARGRRNSRGFRV 187 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKENKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRAKGRKFERARGRRNSRGFRV Sbjct: 1 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKENKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRAKGRKFERARGRRNSRGFRV 187
BLAST of PvulFLAVERTChr01.1322 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445FJK1|A0A445FJK1_GLYSO (60S ribosomal protein L18-2 isoform B OS=Glycine soja OX=3848 GN=D0Y65_052151 PE=3 SV=1) HSP 1 Score: 371.318 bits (952), Expect = 1.179e-129 Identity = 184/187 (98.40%), Postives = 187/187 (100.00%), Query Frame = 0 Query: 1 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKENKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRAKGRKFERARGRRNSRGFRV 187 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAV+LKRLFMSKVNKPPLSLSRLIRYTKGKE+KIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSH+KPYVRAKGRKFERARGRRNSRGFRV Sbjct: 1 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVVLKRLFMSKVNKPPLSLSRLIRYTKGKEDKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRAKGRKFERARGRRNSRGFRV 187
BLAST of PvulFLAVERTChr01.1322 vs. ExPASy TrEMBL (2024)
Match: tr|I1NB76|I1NB76_SOYBN (Large ribosomal subunit protein uL15/eL18 domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_19G211800 PE=3 SV=1) HSP 1 Score: 371.318 bits (952), Expect = 1.179e-129 Identity = 184/187 (98.40%), Postives = 187/187 (100.00%), Query Frame = 0 Query: 1 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKENKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRAKGRKFERARGRRNSRGFRV 187 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAV+LKRLFMSKVNKPPLSLSRLIRYTKGKE+KIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSH+KPYVRAKGRKFERARGRRNSRGFRV Sbjct: 1 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVVLKRLFMSKVNKPPLSLSRLIRYTKGKEDKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRAKGRKFERARGRRNSRGFRV 187
BLAST of PvulFLAVERTChr01.1322 vs. ExPASy TrEMBL (2024)
Match: tr|C6SYU5|C6SYU5_SOYBN (Large ribosomal subunit protein uL15/eL18 domain-containing protein OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 370.163 bits (949), Expect = 3.270e-129 Identity = 183/187 (97.86%), Postives = 187/187 (100.00%), Query Frame = 0 Query: 1 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKENKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRAKGRKFERARGRRNSRGFRV 187 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAV+LKRLFMSKVNKPPLSLSRLIRYTKGKE+KIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSH+KPYVRAKGRKFERARGR+NSRGFRV Sbjct: 1 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVVLKRLFMSKVNKPPLSLSRLIRYTKGKEDKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRAKGRKFERARGRKNSRGFRV 187
BLAST of PvulFLAVERTChr01.1322 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6MBW9|A0A4D6MBW9_VIGUN (Large subunit ribosomal protein L18e OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g2958 PE=3 SV=1) HSP 1 Score: 369.007 bits (946), Expect = 8.402e-129 Identity = 183/187 (97.86%), Postives = 186/187 (99.47%), Query Frame = 0 Query: 1 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKENKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRAKGRKFERARGRRNSRGFRV 187 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKE+KIAVVVGAVTDDIRVYEVPALKV ALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSH+KPYVR+KGRKFERARGRRNSRGFRV Sbjct: 1 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKEDKIAVVVGAVTDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGRRNSRGFRV 187
BLAST of PvulFLAVERTChr01.1322 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3TN54|A0A1S3TN54_VIGRR (60S ribosomal protein L18 OS=Vigna radiata var. radiata OX=3916 GN=LOC106757124 PE=3 SV=1) HSP 1 Score: 369.007 bits (946), Expect = 8.402e-129 Identity = 183/187 (97.86%), Postives = 186/187 (99.47%), Query Frame = 0 Query: 1 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKENKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRAKGRKFERARGRRNSRGFRV 187 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKE+KIAVVVGAVTDDIRVYEVPALKV ALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSH+KPYVR+KGRKFERARGRRNSRGFRV Sbjct: 1 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKEDKIAVVVGAVTDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGRRNSRGFRV 187
BLAST of PvulFLAVERTChr01.1322 vs. ExPASy TrEMBL (2024)
Match: tr|I1JQM9|I1JQM9_SOYBN (Large ribosomal subunit protein uL15/eL18 domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_03G215300 PE=3 SV=1) HSP 1 Score: 368.622 bits (945), Expect = 1.058e-128 Identity = 183/187 (97.86%), Postives = 187/187 (100.00%), Query Frame = 0 Query: 1 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKENKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRAKGRKFERARGRRNSRGFRV 187 MGIDLKAGGKSKKTKRTAPKS+DIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKE+KIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSH+KPYVRAKGRKFERARG+RNSRGFRV Sbjct: 1 MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKEDKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRAKGRKFERARGKRNSRGFRV 187
BLAST of PvulFLAVERTChr01.1322 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2QKI0|A0A0B2QKI0_GLYSO (60S ribosomal protein L18-2 OS=Glycine soja OX=3848 GN=glysoja_039691 PE=3 SV=1) HSP 1 Score: 372.089 bits (954), Expect = 1.064e-128 Identity = 183/187 (97.86%), Postives = 187/187 (100.00%), Query Frame = 0 Query: 1 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKENKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRAKGRKFERARGRRNSRGFRV 187 MGIDLKAGGKSKKTKRTAPKS+DIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKE+KIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSH+KPYVRAKGRKFERARG+RNSRGFRV Sbjct: 88 MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKEDKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRAKGRKFERARGKRNSRGFRV 274
BLAST of PvulFLAVERTChr01.1322 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445LF57|A0A445LF57_GLYSO (60S ribosomal protein L18-2 (Fragment) OS=Glycine soja OX=3848 GN=D0Y65_007838 PE=3 SV=1) HSP 1 Score: 370.548 bits (950), Expect = 1.527e-128 Identity = 183/187 (97.86%), Postives = 187/187 (100.00%), Query Frame = 0 Query: 1 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKENKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRAKGRKFERARGRRNSRGFRV 187 MGIDLKAGGKSKKTKRTAPKS+DIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKE+KIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSH+KPYVRAKGRKFERARG+RNSRGFRV Sbjct: 59 MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKEDKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRAKGRKFERARGKRNSRGFRV 245
BLAST of PvulFLAVERTChr01.1322 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86VA11|A0AA86VA11_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS2583 PE=4 SV=1) HSP 1 Score: 368.237 bits (944), Expect = 1.659e-128 Identity = 182/187 (97.33%), Postives = 186/187 (99.47%), Query Frame = 0 Query: 1 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKENKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRAKGRKFERARGRRNSRGFRV 187 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAV+LKRLFMSKVNKPPLSLSRLIRYTKGKE+KIAVVVGAVTDD RVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSH+KPYVR+KGRKFERARGRRNSRGFRV Sbjct: 1 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVVLKRLFMSKVNKPPLSLSRLIRYTKGKEDKIAVVVGAVTDDTRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGRRNSRGFRV 187
BLAST of PvulFLAVERTChr01.1322 vs. ExPASy Swiss-Prot (2024)
Match: sp|P42791|RL182_ARATH (Large ribosomal subunit protein eL18y OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2) HSP 1 Score: 333.569 bits (854), Expect = 2.045e-117 Identity = 161/187 (86.10%), Postives = 175/187 (93.58%), Query Frame = 0 Query: 1 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKENKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRAKGRKFERARGRRNSRGFRV 187 MGIDL AGGKSKKTKRTAPKSDD+YLKL VKLYRFLVRRT S FN VILKRLFMSKVNK PLSLSRL+ + GKE+KIAV+VG +TDD+RV+E+PA+KVTALRFTE ARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSHSKPYVRAKGRKFE+ARG+R SRGF+V Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKAPLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKRKSRGFKV 187
BLAST of PvulFLAVERTChr01.1322 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q940B0|RL183_ARATH (Large ribosomal subunit protein eL18x OS=Arabidopsis thaliana OX=3702 GN=RPL18C PE=2 SV=1) HSP 1 Score: 331.257 bits (848), Expect = 1.626e-116 Identity = 159/187 (85.03%), Postives = 177/187 (94.65%), Query Frame = 0 Query: 1 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKENKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRAKGRKFERARGRRNSRGFRV 187 MGIDL AGGKSKKTKRTAPKSDD+YLKLLVKLYRFLVRR+ SNFNAVILKRLFMSKVNK PLSLSRL+ + GK++KIAV+VG +TDD+RV+E+PA+KVTALRFTE ARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHS++KPYVR KGRKFE+ARG+R SRGF+V Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKAPLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKRKSRGFKV 187
BLAST of PvulFLAVERTChr01.1322 vs. ExPASy Swiss-Prot (2024)
Match: sp|O65729|RL18_CICAR (Large ribosomal subunit protein eL18 (Fragment) OS=Cicer arietinum OX=3827 GN=RPL18 PE=2 SV=1) HSP 1 Score: 326.25 bits (835), Expect = 1.668e-114 Identity = 161/184 (87.50%), Postives = 175/184 (95.11%), Query Frame = 0 Query: 4 DLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKENKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRAKGRKFERARGRRNSRGFRV 187 DLKAGGK+KKTKRT+PKS+DIYLKLLVKLYRFLVRRT SNFNAVILKRLFMSKVN+PPLSLSRLI+Y +GKE KI VVVGAVTDDIRVY+VP +KVTAL+FTETARARI+KAGGECLTFDQLALR PL +TVLLRGPKNAREAVKHFGPAPGVPHSH+KPYVR+KGRKFE+ARGRR SRGFRV Sbjct: 1 DLKAGGKNKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLSLSRLIKYMQGKEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFDQLALRLPL-TDTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSRGFRV 183
BLAST of PvulFLAVERTChr01.1322 vs. ExPASy Swiss-Prot (2024)
Match: sp|O22254|RL181_ARATH (Large ribosomal subunit protein eL18z OS=Arabidopsis thaliana OX=3702 GN=RPL18A PE=3 SV=3) HSP 1 Score: 301.982 bits (772), Expect = 6.428e-105 Identity = 150/188 (79.79%), Postives = 163/188 (86.70%), Query Frame = 0 Query: 1 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKENKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAP-LGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRAKGRKFERARGRRNSRGFRV 187 MGIDL AGGKSKKTKRT PKSDD+YLKLLVK R+LVRRT S FNAVILKRLFMSKVNK PLSLSRL+RY GK+ KIAV+VG VTDD+R+ +VPAL VTALRFTE+ARARI KAGGECLTFDQLAL P +NTVLLRGPKN REAVKHFGPAPGVPHSH+KPYVR G+K E ARGRR SRGF+V Sbjct: 1 MGIDLIAGGKSKKTKRTEPKSDDVYLKLLVKANRYLVRRTESKFNAVILKRLFMSKVNKAPLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIHKAGGECLTFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKKIEIARGRRRSRGFKV 188
BLAST of PvulFLAVERTChr01.1322 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q4GXG7|RL18_TIMBA (Large ribosomal subunit protein eL18 OS=Timarcha balearica OX=79517 GN=RpL18 PE=2 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 2.535e-85 Identity = 123/188 (65.43%), Postives = 153/188 (81.38%), Query Frame = 0 Query: 1 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTK--GKENKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRAKGRKFERARGRRNSRGFR 186 MGID+ +K +RT PKS D+YL+LLVKLYR+L RRTG+ FN +ILKRLFMSK+ +PP+SLS+++R+ K G+E AV+VG VTDD R++E+P L + ALR T+TARA I KAGGE +TFDQLALR+P G TVLL+G +NAREAVKHFGPAPGVPHSH+KP VR+KGRKFERARGRR S G++ Sbjct: 1 MGIDINHK-YDRKVRRTEPKSQDVYLRLLVKLYRYLARRTGAKFNKIILKRLFMSKIYRPPISLSKVVRFMKKPGRELLTAVIVGTVTDDSRIFEIPKLSICALRVTQTARAGILKAGGEVITFDQLALRSPTGSKTVLLQGKRNAREAVKHFGPAPGVPHSHAKPLVRSKGRKFERARGRRRSCGYK 187
BLAST of PvulFLAVERTChr01.1322 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q0PXY6|RL18_DIACI (Large ribosomal subunit protein eL18 OS=Diaphorina citri OX=121845 GN=RpL18 PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 7.024e-82 Identity = 113/188 (60.11%), Postives = 152/188 (80.85%), Query Frame = 0 Query: 1 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTK--GKENKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRAKGRKFERARGRRNSRGFR 186 MG+D+ ++ +RT PKS D+YL+LLVKLYRFL RRT S FN +ILKRLFMSK+N+PP+++S+++R+ K +E ++AV+VG + DD R++ +P L V ALR T+ AR+RI KAGGE +TFDQLALRAP G+NTVL++G + REA KHFGPAPGVPHSH+K +VR+KGR+FERARGRR S+G++ Sbjct: 1 MGVDI-CHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPMAISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTVCALRVTDKARSRILKAGGEIITFDQLALRAPTGKNTVLMQGKRTGREANKHFGPAPGVPHSHTKAHVRSKGRQFERARGRRTSKGYK 187
BLAST of PvulFLAVERTChr01.1322 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q56FG8|RL18_LYSTE (Large ribosomal subunit protein eL18 OS=Lysiphlebus testaceipes OX=77504 GN=RpL18 PE=2 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 9.543e-82 Identity = 119/188 (63.30%), Postives = 150/188 (79.79%), Query Frame = 0 Query: 1 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTK--GKENKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRAKGRKFERARGRRNSRGFR 186 MGID+ +K +RT P+S DIYL+LLVK+YRFL RRT S F+ +ILKRLFMS++N PP+SL+R+ R+ K ++N IAVVVG +TDD R++E+P LKV ALR TE AR RI KAGGE +TF++LA +P G TVL++G +NAREAVKHFGPAPGVPHSH+KP VR+KGRKFERARGRR S G++ Sbjct: 1 MGIDINHK-YDRKVRRTEPRSQDIYLRLLVKVYRFLARRTNSKFSRIILKRLFMSRINLPPISLARVCRFMKKESRKNSIAVVVGTITDDARIFEIPKLKVCALRITEKARGRILKAGGEIITFEKLAEISPTGNKTVLMQGRRNAREAVKHFGPAPGVPHSHTKPLVRSKGRKFERARGRRKSCGYK 187
BLAST of PvulFLAVERTChr01.1322 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9VS34|RL18_DROME (Large ribosomal subunit protein eL18 OS=Drosophila melanogaster OX=7227 GN=RpL18 PE=1 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 9.677e-80 Identity = 120/188 (63.83%), Postives = 144/188 (76.60%), Query Frame = 0 Query: 1 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKG--KENKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRAKGRKFERARGRRNSRGFR 186 MGID+ +K +RT PKS D+YL+LLVKLYRFL RRT FN +ILKRLFMSK+N+PPLSL R+ R+ K + VVVG VTDD R+ VP L V AL T+TAR RI KAGGE LTFDQLALR+P G+NT+LL+G + AR A KHFG APGVPHSH++PYVR+KGRKFERARGRR+S G++ Sbjct: 1 MGIDINHK-YDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRPPLSLQRIARFFKAANQPESTIVVVGTVTDDARLLVVPKLTVCALHVTQTARERILKAGGEVLTFDQLALRSPTGKNTLLLQGRRTARTACKHFGKAPGVPHSHTRPYVRSKGRKFERARGRRSSCGYK 187
BLAST of PvulFLAVERTChr01.1322 vs. ExPASy Swiss-Prot (2024)
Match: sp|P12001|RL18_RAT (Large ribosomal subunit protein eL18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2) HSP 1 Score: 236.884 bits (603), Expect = 3.760e-79 Identity = 116/176 (65.91%), Postives = 139/176 (78.98%), Query Frame = 0 Query: 1 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTK--GKENKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRAKGRKFE 174 MG+D++ K +K +R PKS DIYL+LLVKLYRFL RRT S FN V+LKRLFMS+ N+PPLSLSR+IR K G+ENK AVVVG +TDD+R+ EVP LKV ALR + AR+RI KAGG+ LTFDQLAL +P G+ TVLL GP+ RE +HFG APG PHSH+KPYVR+KGRKFE Sbjct: 1 MGVDIRHN-KDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTITDDVRILEVPKLKVCALRVSSRARSRILKAGGKILTFDQLALESPKGRGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFE 175
BLAST of PvulFLAVERTChr01.1322 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q4PM04|RL18_IXOSC (Large ribosomal subunit protein eL18 OS=Ixodes scapularis OX=6945 GN=RpL18 PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 9.123e-79 Identity = 114/176 (64.77%), Postives = 146/176 (82.95%), Query Frame = 0 Query: 1 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTK--GKENKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRAKGRKFE 174 MGID+ +K R PKS+++YL LLVK+YRFL RR+G+ FN ++LKRLFMS++NKP +SL+R+ R+ K G+EN IAVVVG VTDD+R+Y+VP L++ ALR TE ARARI KAGGE LTFDQLA++AP G+ TVL++GP+N+REA +HFGPAPGVPHSH+KPYVR+KGRKFE Sbjct: 1 MGIDINHK-YDRKVVRRRPKSENVYLGLLVKVYRFLARRSGAKFNRIVLKRLFMSRINKPVISLARVTRFMKKPGRENLIAVVVGTVTDDLRLYDVPKLRLCALRVTERARARILKAGGEILTFDQLAVQAPKGKGTVLMQGPRNSREACRHFGPAPGVPHSHTKPYVRSKGRKFE 175
BLAST of PvulFLAVERTChr01.1322 vs. Araport11
Match: | (Symbols: RPL18 | ribosomal protein L18 | chr3:1621511-1622775 FORWARD LENGTH=187) HSP 1 Score: 333.569 bits (854), Expect = 2.141e-118 Identity = 161/187 (86.10%), Postives = 175/187 (93.58%), Query Frame = 0 Query: 1 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKENKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRAKGRKFERARGRRNSRGFRV 187 MGIDL AGGKSKKTKRTAPKSDD+YLKL VKLYRFLVRRT S FN VILKRLFMSKVNK PLSLSRL+ + GKE+KIAV+VG +TDD+RV+E+PA+KVTALRFTE ARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSHSKPYVRAKGRKFE+ARG+R SRGF+V Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKAPLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKRKSRGFKV 187
BLAST of PvulFLAVERTChr01.1322 vs. Araport11
Match: | (Symbols: RPL18C | | chr5:9873169-9874297 FORWARD LENGTH=187) HSP 1 Score: 331.257 bits (848), Expect = 1.702e-117 Identity = 159/187 (85.03%), Postives = 177/187 (94.65%), Query Frame = 0 Query: 1 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKENKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRAKGRKFERARGRRNSRGFRV 187 MGIDL AGGKSKKTKRTAPKSDD+YLKLLVKLYRFLVRR+ SNFNAVILKRLFMSKVNK PLSLSRL+ + GK++KIAV+VG +TDD+RV+E+PA+KVTALRFTE ARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHS++KPYVR KGRKFE+ARG+R SRGF+V Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKAPLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKRKSRGFKV 187
BLAST of PvulFLAVERTChr01.1322 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:19515898-19516922 REVERSE LENGTH=186) HSP 1 Score: 297.36 bits (760), Expect = 5.036e-104 Identity = 148/186 (79.57%), Postives = 161/186 (86.56%), Query Frame = 0 Query: 3 IDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKENKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAP-LGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRAKGRKFERARGRRNSRGFRV 187 IDL AGGKSKKTKRT PKSDD+YLKLLVK R+LVRRT S FNAVILKRLFMSKVNK PLSLSRL+RY GK+ KIAV+VG VTDD+R+ +VPAL VTALRFTE+ARARI KAGGECLTFDQLAL P +NTVLLRGPKN REAVKHFGPAPGVPHSH+KPYVR G+K E ARGRR SRGF+V Sbjct: 1 IDLIAGGKSKKTKRTEPKSDDVYLKLLVKANRYLVRRTESKFNAVILKRLFMSKVNKAPLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIHKAGGECLTFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKKIEIARGRRRSRGFKV 186
BLAST of PvulFLAVERTChr01.1322 vs. Araport11
Match: | (Symbols: RPL18 | ribosomal protein L18 | chr3:1622060-1622775 FORWARD LENGTH=134) HSP 1 Score: 242.662 bits (618), Expect = 3.589e-83 Identity = 114/134 (85.07%), Postives = 127/134 (94.78%), Query Frame = 0 Query: 54 MSKVNKPPLSLSRLIRYTKGKENKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRAKGRKFERARGRRNSRGFRV 187 MSKVNK PLSLSRL+ + GKE+KIAV+VG +TDD+RV+E+PA+KVTALRFTE ARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSHSKPYVRAKGRKFE+ARG+R SRGF+V Sbjct: 1 MSKVNKAPLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKRKSRGFKV 134
BLAST of PvulFLAVERTChr01.1322 vs. Araport11
Match: | (Symbols: RPL18 | ribosomal protein L18 | chr3:1622060-1622775 FORWARD LENGTH=134) HSP 1 Score: 242.662 bits (618), Expect = 3.589e-83 Identity = 114/134 (85.07%), Postives = 127/134 (94.78%), Query Frame = 0 Query: 54 MSKVNKPPLSLSRLIRYTKGKENKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRAKGRKFERARGRRNSRGFRV 187 MSKVNK PLSLSRL+ + GKE+KIAV+VG +TDD+RV+E+PA+KVTALRFTE ARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSHSKPYVRAKGRKFE+ARG+R SRGF+V Sbjct: 1 MSKVNKAPLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKRKSRGFKV 134
BLAST of PvulFLAVERTChr01.1322 vs. Araport11
Match: | (Symbols: RPL18C | | chr5:9873587-9874297 FORWARD LENGTH=134) HSP 1 Score: 234.958 bits (598), Expect = 3.818e-80 Identity = 110/134 (82.09%), Postives = 126/134 (94.03%), Query Frame = 0 Query: 54 MSKVNKPPLSLSRLIRYTKGKENKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRAKGRKFERARGRRNSRGFRV 187 MSKVNK PLSLSRL+ + GK++KIAV+VG +TDD+RV+E+PA+KVTALRFTE ARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHS++KPYVR KGRKFE+ARG+R SRGF+V Sbjct: 1 MSKVNKAPLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKRKSRGFKV 134 The following BLAST results are available for this feature:
BLAST of PvulFLAVERTChr01.1322 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of PvulFLAVERTChr01.1322 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt Swissprot) Total hits: 10
BLAST of PvulFLAVERTChr01.1322 vs. Araport11
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs arabidopsis Araport11) Total hits: 6
InterPro
Analysis Name: Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL
Date Performed: 2024-08-19
Analysis Name: InterProScan Analysis for Phaseolus vulgaris cv. Flavert genome v1.0 Date Performed: 2024-08-19
Sequences
The
following sequences are available for this feature:
mRNA sequence >drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr01.1322 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr01.1322; Name=PvulFLAVERTChr01.1322; organism=Phaseolus vulgaris; type=mRNA; length=1198bpback to top protein sequence of drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr01.1322 >drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr01.1322 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr01.1322; Name=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr01.1322; organism=Phaseolus vulgaris; type=polypeptide; length=187bpback to top mRNA from alignment at Chr01:50022818..50025211+ Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr01.1322 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr01.1322; Name=PvulFLAVERTChr01.1322; organism=Phaseolus vulgaris; type=mRNA; length=2394bp; location=Sequence derived from: Chr01:50022818..50025211+ (Phaseolus vulgarisback to top Coding sequence (CDS) from alignment at Chr01:50022818..50025211+ >drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr01.1322 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr01.1322; Name=PvulFLAVERTChr01.1322; organism=Phaseolus vulgaris; type=CDS; length=564bp; location=Sequence derived from: Chr01:50022818..50025211+ (Phaseolus vulgarisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|