PvulFLAVERTChr04.1003
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of PvulFLAVERTChr04.1003 vs. ExPASy TrEMBL (2024)
Match: tr|V7C3Z8|V7C3Z8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_004G166200g PE=3 SV=1) HSP 1 Score: 428.328 bits (1100), Expect = 1.274e-151 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0 Query: 1 MVLTDEEISRLYRIRKTVMHMLRDRGYLVGDFEINMSKHEFKSSHGGENMKREDLDLNKSKKDNSSDQIYVFFPDEAKVGVKTMKTYTNRMNNDNVYRAILVTQTNLTPFARTCVSEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 207
MVLTDEEISRLYRIRKTVMHMLRDRGYLVGDFEINMSKHEFKSSHGGENMKREDLDLNKSKKDNSSDQIYVFFPDEAKVGVKTMKTYTNRMNNDNVYRAILVTQTNLTPFARTCVSEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV
Sbjct: 1 MVLTDEEISRLYRIRKTVMHMLRDRGYLVGDFEINMSKHEFKSSHGGENMKREDLDLNKSKKDNSSDQIYVFFPDEAKVGVKTMKTYTNRMNNDNVYRAILVTQTNLTPFARTCVSEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 207
BLAST of PvulFLAVERTChr04.1003 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6LUF8|A0A4D6LUF8_VIGUN (DNA-directed RNA polymerases I OS=Vigna unguiculata OX=3917 GN=DEO72_LG5g131 PE=3 SV=1) HSP 1 Score: 395.971 bits (1016), Expect = 8.549e-139 Identity = 193/207 (93.24%), Postives = 201/207 (97.10%), Query Frame = 0 Query: 1 MVLTDEEISRLYRIRKTVMHMLRDRGYLVGDFEINMSKHEFKSSHGGENMKREDLDLNKSKKDNSSDQIYVFFPDEAKVGVKTMKTYTNRMNNDNVYRAILVTQTNLTPFARTCVSEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 207
MVL DEEISRLYRIRKTVM MLRDRGYLVGDFEINMSKHEFKS +G E+MKREDL +NKSKKDNS DQIYVFFP+EAKVGVKTMKTYTNRMN++NV+RAILVTQTNLTPFARTC+SEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV
Sbjct: 1 MVLPDEEISRLYRIRKTVMQMLRDRGYLVGDFEINMSKHEFKSKYG-EHMKREDLVINKSKKDNSGDQIYVFFPEEAKVGVKTMKTYTNRMNSENVFRAILVTQTNLTPFARTCISEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 206
BLAST of PvulFLAVERTChr04.1003 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86VYH3|A0AA86VYH3_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS14930 PE=4 SV=1) HSP 1 Score: 395.201 bits (1014), Expect = 1.496e-138 Identity = 192/207 (92.75%), Postives = 200/207 (96.62%), Query Frame = 0 Query: 1 MVLTDEEISRLYRIRKTVMHMLRDRGYLVGDFEINMSKHEFKSSHGGENMKREDLDLNKSKKDNSSDQIYVFFPDEAKVGVKTMKTYTNRMNNDNVYRAILVTQTNLTPFARTCVSEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 207
M L DEEI+RLYRIRKTVM MLRDRGYLVGDFEINMSKHEFKS +G E+MKREDL +NKSKKDNS DQIYVFFP+EAKVGVKTMKTYTNRMN++NVYRAILVTQTNLTPFARTC+SEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV
Sbjct: 1 MALNDEEIARLYRIRKTVMQMLRDRGYLVGDFEINMSKHEFKSKYG-EHMKREDLVINKSKKDNSGDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 206
BLAST of PvulFLAVERTChr04.1003 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3TCL1|A0A0S3TCL1_PHAAN (RNA polymerase subunit H/Rpb5 C-terminal domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.11G248300 PE=3 SV=1) HSP 1 Score: 394.43 bits (1012), Expect = 3.369e-138 Identity = 192/207 (92.75%), Postives = 201/207 (97.10%), Query Frame = 0 Query: 1 MVLTDEEISRLYRIRKTVMHMLRDRGYLVGDFEINMSKHEFKSSHGGENMKREDLDLNKSKKDNSSDQIYVFFPDEAKVGVKTMKTYTNRMNNDNVYRAILVTQTNLTPFARTCVSEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 207
MVL DEEISRL+RIRKTVM MLRDRG+LVGDFEINMSKHEFKS +G E+MKREDL +NKSKKDNS DQIYVFFP+EAKVGVKTMKTYTNRMN++NVYRAILVTQTNLTPFARTC+SEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV
Sbjct: 1 MVLPDEEISRLFRIRKTVMQMLRDRGFLVGDFEINMSKHEFKSKYG-EHMKREDLVINKSKKDNSGDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 206
BLAST of PvulFLAVERTChr04.1003 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445JU34|A0A445JU34_GLYSO (DNA-directed RNA polymerases II and IV subunit 5A OS=Glycine soja OX=3848 GN=D0Y65_017257 PE=3 SV=1) HSP 1 Score: 390.578 bits (1002), Expect = 9.459e-137 Identity = 189/207 (91.30%), Postives = 200/207 (96.62%), Query Frame = 0 Query: 1 MVLTDEEISRLYRIRKTVMHMLRDRGYLVGDFEINMSKHEFKSSHGGENMKREDLDLNKSKKDNSSDQIYVFFPDEAKVGVKTMKTYTNRMNNDNVYRAILVTQTNLTPFARTCVSEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 207
MVL++EE+ RLYRIRKTVM MLRDRG+LVGDFEINMSKHEFKS +G E+MKREDL +NKSKKDNS DQIYVFFPDE KVGVKTMKTYTNRMN++NVYRAILVTQTNLTPFARTC+SEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTL+ERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV
Sbjct: 1 MVLSEEEMGRLYRIRKTVMQMLRDRGFLVGDFEINMSKHEFKSKYG-EHMKREDLVINKSKKDNSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 206
BLAST of PvulFLAVERTChr04.1003 vs. ExPASy TrEMBL (2024)
Match: tr|C6SVA4|C6SVA4_SOYBN (RNA polymerase subunit H/Rpb5 C-terminal domain-containing protein OS=Glycine max OX=3847 GN=100499667 PE=2 SV=1) HSP 1 Score: 390.578 bits (1002), Expect = 9.459e-137 Identity = 189/207 (91.30%), Postives = 200/207 (96.62%), Query Frame = 0 Query: 1 MVLTDEEISRLYRIRKTVMHMLRDRGYLVGDFEINMSKHEFKSSHGGENMKREDLDLNKSKKDNSSDQIYVFFPDEAKVGVKTMKTYTNRMNNDNVYRAILVTQTNLTPFARTCVSEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 207
MVL++EE+ RLYRIRKTVM MLRDRG+LVGDFEINMSKHEFKS +G E+MKREDL +NKSKKDNS DQIYVFFPDE KVGVKTMKTYTNRMN++NVYRAILVTQTNLTPFARTC+SEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTL+ERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV
Sbjct: 1 MVLSEEEMGRLYRIRKTVMQMLRDRGFLVGDFEINMSKHEFKSKYG-EHMKREDLVINKSKKDNSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 206
BLAST of PvulFLAVERTChr04.1003 vs. ExPASy TrEMBL (2024)
Match: tr|C6SXZ4|C6SXZ4_SOYBN (RNA polymerase subunit H/Rpb5 C-terminal domain-containing protein OS=Glycine max OX=3847 GN=100306098 PE=2 SV=1) HSP 1 Score: 389.037 bits (998), Expect = 4.541e-136 Identity = 189/207 (91.30%), Postives = 199/207 (96.14%), Query Frame = 0 Query: 1 MVLTDEEISRLYRIRKTVMHMLRDRGYLVGDFEINMSKHEFKSSHGGENMKREDLDLNKSKKDNSSDQIYVFFPDEAKVGVKTMKTYTNRMNNDNVYRAILVTQTNLTPFARTCVSEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 207
MVL++EEI RLYRIRKTVM MLRDR +LVGDFEINMSKHEFKS +G E+MKREDL +NKSKKDNS DQIYVFFPDE KVGVKTMKTYTNRMN++NVYRAILVTQTNLTPFARTC+SEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTL+ERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV
Sbjct: 1 MVLSEEEIGRLYRIRKTVMQMLRDRNFLVGDFEINMSKHEFKSKYG-EHMKREDLVINKSKKDNSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 206
BLAST of PvulFLAVERTChr04.1003 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2SL78|A0A0B2SL78_GLYSO (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Glycine soja OX=3848 GN=D0Y65_024649 PE=3 SV=1) HSP 1 Score: 389.037 bits (998), Expect = 4.541e-136 Identity = 189/207 (91.30%), Postives = 199/207 (96.14%), Query Frame = 0 Query: 1 MVLTDEEISRLYRIRKTVMHMLRDRGYLVGDFEINMSKHEFKSSHGGENMKREDLDLNKSKKDNSSDQIYVFFPDEAKVGVKTMKTYTNRMNNDNVYRAILVTQTNLTPFARTCVSEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 207
MVL++EEI RLYRIRKTVM MLRDR +LVGDFEINMSKHEFKS +G E+MKREDL +NKSKKDNS DQIYVFFPDE KVGVKTMKTYTNRMN++NVYRAILVTQTNLTPFARTC+SEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTL+ERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV
Sbjct: 1 MVLSEEEIGRLYRIRKTVMQMLRDRNFLVGDFEINMSKHEFKSKYG-EHMKREDLVINKSKKDNSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 206
BLAST of PvulFLAVERTChr04.1003 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0K054|A0A8T0K054_PHAAN (DNA-directed RNA polymerase II and IV subunit OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0123720 PE=3 SV=1) HSP 1 Score: 387.111 bits (993), Expect = 2.996e-135 Identity = 183/207 (88.41%), Postives = 202/207 (97.58%), Query Frame = 0 Query: 1 MVLTDEEISRLYRIRKTVMHMLRDRGYLVGDFEINMSKHEFKSSHGGENMKREDLDLNKSKKDNSSDQIYVFFPDEAKVGVKTMKTYTNRMNNDNVYRAILVTQTNLTPFARTCVSEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 207
MVL++EE+SRL+RIRKTVM MLRDRGYLVGDFEINMSKH+FKS +G E+MKREDL +NKSKKDNS DQIY+FFP+EAKVGVKTMKTYTNRMN++NVYRAILVTQT+LTPFARTC+SEISSKFHLEVFQEAELLVNIK+HELVPEHQ+LT+AEKKTL+ERYTVKETQLPR+QVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV
Sbjct: 1 MVLSEEEVSRLFRIRKTVMQMLRDRGYLVGDFEINMSKHQFKSKYG-EHMKREDLVINKSKKDNSGDQIYIFFPEEAKVGVKTMKTYTNRMNSENVYRAILVTQTSLTPFARTCISEISSKFHLEVFQEAELLVNIKDHELVPEHQILTEAEKKTLVERYTVKETQLPRVQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 206
BLAST of PvulFLAVERTChr04.1003 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TN92|A0A151TN92_CAJCA (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Cajanus cajan OX=3821 GN=KK1_022092 PE=3 SV=1) HSP 1 Score: 385.571 bits (989), Expect = 1.142e-134 Identity = 187/207 (90.34%), Postives = 197/207 (95.17%), Query Frame = 0 Query: 1 MVLTDEEISRLYRIRKTVMHMLRDRGYLVGDFEINMSKHEFKSSHGGENMKREDLDLNKSKKDNSSDQIYVFFPDEAKVGVKTMKTYTNRMNNDNVYRAILVTQTNLTPFARTCVSEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 207
MVL +EEI RLYRIRKTVM MLRDRGYLVGDFEINMSKH+FKS +G ENMKREDL +NKSKKDNS DQIYVFFP+E KVGVKTMKTYTNRMN++NVYRAILV QTNLTPFARTC+SEISS+FHLEVFQEAELLVNIKEH LVPEHQVLTDAEKKTL+ERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV
Sbjct: 1 MVLLEEEIGRLYRIRKTVMQMLRDRGYLVGDFEINMSKHDFKSKYG-ENMKREDLVINKSKKDNSGDQIYVFFPEEVKVGVKTMKTYTNRMNSENVYRAILVLQTNLTPFARTCISEISSRFHLEVFQEAELLVNIKEHVLVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 206
BLAST of PvulFLAVERTChr04.1003 vs. ExPASy Swiss-Prot (2024)
Match: sp|O81098|RPB5A_ARATH (DNA-directed RNA polymerases II and IV subunit 5A OS=Arabidopsis thaliana OX=3702 GN=NRPB5A PE=1 SV=1) HSP 1 Score: 338.576 bits (867), Expect = 1.034e-118 Identity = 159/206 (77.18%), Postives = 185/206 (89.81%), Query Frame = 0 Query: 2 VLTDEEISRLYRIRKTVMHMLRDRGYLVGDFEINMSKHEFKSSHGGENMKREDLDLNKSKKDNSSDQIYVFFPDEAKVGVKTMKTYTNRMNNDNVYRAILVTQTNLTPFARTCVSEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 207
+LT+EE+ RLYRI+KT+M MLRDRGY + D E+ M+K +F HG +NMKREDL K+K++++SDQ+Y+FFPDEAKVGVKTMK YTNRM ++NV+RAILV Q NLTPFARTC+SEISSKFHLEVFQEAE+LVNIKEH LVPEHQVLT EKKTL+ERYTVKETQLPRIQVTDP+ARY+GLKRGQVVKIIRPSETAGRYVTYR+VV
Sbjct: 1 MLTEEELKRLYRIQKTLMQMLRDRGYFIADSELTMTKQQFIRKHG-DNMKREDLVTLKAKRNDNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRGQVVKIIRPSETAGRYVTYRYVV 205
BLAST of PvulFLAVERTChr04.1003 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9N5K2|RPAB1_CAEEL (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Caenorhabditis elegans OX=6239 GN=rpb-5 PE=3 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 5.240e-77 Identity = 111/211 (52.61%), Postives = 151/211 (71.56%), Query Frame = 0 Query: 3 LTDEEIS--RLYRIRKTVMHMLRDRGYLVGDFEINMSKHEFKSSHGG----ENMKREDLDLNKSKKDNSSDQIYVFFPDEAKVGVKTMKTYTNRMNNDNVYRAILVTQTNLTPFARTCVSEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 207
+ D+E+ RL+RIRKTV+ M+ DRGYLV E++ FK +G + R DL + + D+ +DQ++VFFP++AK+G+KT+K +M N+ RAI+V QT +TP A+ + +++ K+ LE F EAEL+VNI EHELVPEH V+T EK L+ RY +K++QLPRIQ DPVARY+GL+RGQVVKIIRPSETAGRY+TYR VV
Sbjct: 1 MADDELETYRLWRIRKTVLQMVHDRGYLVAQDELDQPLETFKVQYGDRPSEKKPARSDLTILVAHNDDPADQMFVFFPEDAKIGIKTIKAICQQMQEQNISRAIIVVQTGMTPSAKQSIGDMAPKYMLEHFLEAELMVNITEHELVPEHVVMTAEEKAELLARYKLKDSQLPRIQQCDPVARYFGLRRGQVVKIIRPSETAGRYITYRLVV 211
BLAST of PvulFLAVERTChr04.1003 vs. ExPASy Swiss-Prot (2024)
Match: sp|A8XGH1|RPAB1_CAEBR (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Caenorhabditis briggsae OX=6238 GN=rpb-5 PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 3.828e-76 Identity = 110/211 (52.13%), Postives = 150/211 (71.09%), Query Frame = 0 Query: 3 LTDEEIS--RLYRIRKTVMHMLRDRGYLVGDFEINMSKHEFKSSHGG----ENMKREDLDLNKSKKDNSSDQIYVFFPDEAKVGVKTMKTYTNRMNNDNVYRAILVTQTNLTPFARTCVSEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 207
+ D+E+ RL+RIRKTV+ M+ DRGYLV E++ FK + G + R DL + + D+ +DQ++VFFP++ K+G+KT+K +M N+ RAI+V QT +TP A+ + +++ K+ LE F EAEL+VNI EHELVPEH V+T EK L+ RY +K++QLPRIQ DPVARY+GL+RGQVVKIIRPSETAGRY+TYR VV
Sbjct: 1 MADDELETYRLWRIRKTVLQMVHDRGYLVAQEELDQPLETFKETFGDRPSEKKPARSDLTILVAHNDDPADQMFVFFPEDTKIGIKTIKAICQQMQEQNISRAIIVVQTGMTPSAKQSIGDMAPKYMLEHFLEAELMVNITEHELVPEHVVMTAEEKAELLARYKLKDSQLPRIQQCDPVARYFGLRRGQVVKIIRPSETAGRYITYRLVV 211
BLAST of PvulFLAVERTChr04.1003 vs. ExPASy Swiss-Prot (2024)
Match: sp|B0BNE2|RPAB1_RAT (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Rattus norvegicus OX=10116 GN=Polr2e PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 1.145e-74 Identity = 107/206 (51.94%), Postives = 148/206 (71.84%), Query Frame = 0 Query: 5 DEEISRLYRIRKTVMHMLRDRGYLVGDFEINMSKHEFKSSHGGE----NMKREDLDLNKSKKDNSSDQIYVFFPDEAKVGVKTMKTYTNRMNNDNVYRAILVTQTNLTPFARTCVSEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFV 206
+EE RL++IRKT+M + DRGYLV E++ + EFK+ G + +R DL + + D+ +DQ++VFFP+E KVG+KT+K Y RM +N+ RA++V Q +TP A+ + +++ K+ LE F + ELL+NI EHELVPEH V+T E L+ RY ++E+QLPRIQ DPVARY+G+KRGQVVKIIRPSETAGRY+TYR V
Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYVLEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRESQLPRIQAGDPVARYFGIKRGQVVKIIRPSETAGRYITYRLV 209
BLAST of PvulFLAVERTChr04.1003 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q80UW8|RPAB1_MOUSE (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Mus musculus OX=10090 GN=Polr2e PE=1 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 1.145e-74 Identity = 107/206 (51.94%), Postives = 148/206 (71.84%), Query Frame = 0 Query: 5 DEEISRLYRIRKTVMHMLRDRGYLVGDFEINMSKHEFKSSHGGE----NMKREDLDLNKSKKDNSSDQIYVFFPDEAKVGVKTMKTYTNRMNNDNVYRAILVTQTNLTPFARTCVSEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFV 206
+EE RL++IRKT+M + DRGYLV E++ + EFK+ G + +R DL + + D+ +DQ++VFFP+E KVG+KT+K Y RM +N+ RA++V Q +TP A+ + +++ K+ LE F + ELL+NI EHELVPEH V+T E L+ RY ++E+QLPRIQ DPVARY+G+KRGQVVKIIRPSETAGRY+TYR V
Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYVLEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRESQLPRIQAGDPVARYFGIKRGQVVKIIRPSETAGRYITYRLV 209
BLAST of PvulFLAVERTChr04.1003 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q2T9T3|RPAB1_BOVIN (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Bos taurus OX=9913 GN=POLR2E PE=1 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.537e-74 Identity = 107/206 (51.94%), Postives = 147/206 (71.36%), Query Frame = 0 Query: 5 DEEISRLYRIRKTVMHMLRDRGYLVGDFEINMSKHEFKSSHGGE----NMKREDLDLNKSKKDNSSDQIYVFFPDEAKVGVKTMKTYTNRMNNDNVYRAILVTQTNLTPFARTCVSEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFV 206
+EE RL++IRKT+M + DRGYLV ++ + EFK+ GG+ +R DL + + D+ +DQ++VFFP+E KVG+KT+K Y RM +N+ RA++V Q +TP A+ + +++ K+ LE F + ELL+NI EHELVPEH V+T E L+ RY ++E QLPRIQ DPVARY+G+KRGQVVKIIRPSETAGRY+TYR V
Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDGLDQTLEEFKAQFGGKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVARYFGIKRGQVVKIIRPSETAGRYITYRLV 209
BLAST of PvulFLAVERTChr04.1003 vs. ExPASy Swiss-Prot (2024)
Match: sp|P19388|RPAB1_HUMAN (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Homo sapiens OX=9606 GN=POLR2E PE=1 SV=4) HSP 1 Score: 226.483 bits (576), Expect = 1.934e-74 Identity = 107/206 (51.94%), Postives = 147/206 (71.36%), Query Frame = 0 Query: 5 DEEISRLYRIRKTVMHMLRDRGYLVGDFEINMSKHEFKSSHGGE----NMKREDLDLNKSKKDNSSDQIYVFFPDEAKVGVKTMKTYTNRMNNDNVYRAILVTQTNLTPFARTCVSEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFV 206
+EE RL++IRKT+M + DRGYLV E++ + EFK+ G + +R DL + + D+ +DQ++VFFP+E KVG+KT+K Y RM +N+ RA++V Q +TP A+ + +++ K+ LE F + ELL+NI EHELVPEH V+T E L+ RY ++E QLPRIQ DPVARY+G+KRGQVVKIIRPSETAGRY+TYR V
Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQSGDKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVARYFGIKRGQVVKIIRPSETAGRYITYRLV 209
BLAST of PvulFLAVERTChr04.1003 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q5R587|RPAB1_PONAB (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Pongo abelii OX=9601 GN=POLR2E PE=2 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 6.292e-74 Identity = 106/206 (51.46%), Postives = 147/206 (71.36%), Query Frame = 0 Query: 5 DEEISRLYRIRKTVMHMLRDRGYLVGDFEINMSKHEFKSSHGGE----NMKREDLDLNKSKKDNSSDQIYVFFPDEAKVGVKTMKTYTNRMNNDNVYRAILVTQTNLTPFARTCVSEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFV 206
+EE RL++IRKT+M + DRGYLV E++ + EF++ G + +R DL + + D+ +DQ++VFFP+E KVG+KT+K Y RM +N+ RA++V Q +TP A+ + +++ K+ LE F + ELL+NI EHELVPEH V+T E L+ RY ++E QLPRIQ DPVARY+G+KRGQVVKIIRPSETAGRY+TYR V
Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFRAQFGDKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVARYFGIKRGQVVKIIRPSETAGRYITYRLV 209
BLAST of PvulFLAVERTChr04.1003 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q54EH2|RPAB1_DICDI (DNA-directed RNA polymerases I, II, and III subunit rpabc1 OS=Dictyostelium discoideum OX=44689 GN=polr2e PE=3 SV=2) HSP 1 Score: 213.772 bits (543), Expect = 1.397e-69 Identity = 110/204 (53.92%), Postives = 138/204 (67.65%), Query Frame = 0 Query: 6 EEISRLYRIRKTVMHMLRDRGYLVGDFEINMSKHEFKSSHGGENMKREDLDLNKSKKDNSSDQIYVFFPDEAKVGVKTMKTYTNRMNNDNVYRAILVTQTNLTPFARTCVSEISS--KFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 207
E+I+RL +IRKTV+ ML DR Y++ +E + F S RE+L + KKD+ +D IYVFFPD KVGV +K Y + M + RAI+V Q N+TPFA+ ++E S K LE F EAELLVNI H+LVP+H +LT EK L+ RY +KE+QLPRIQ DPVARYYGL RG VVKI+RPSETAGRY+TYR V
Sbjct: 2 EDINRLLQIRKTVLQMLSDREYIITAYEQEYPRESFVS--------RENLTMYCVKKDDPTDSIYVFFPDTPKVGVTQIKKYVDIMKDRQANRAIIVVQQNITPFAKQALAEFSQEKKITLEQFNEAELLVNITHHQLVPKHILLTKEEKLELLTRYKMKESQLPRIQTNDPVARYYGLSRGHVVKIVRPSETAGRYITYRLCV 197
BLAST of PvulFLAVERTChr04.1003 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FJL8|RP5L1_ARATH (DNA-directed RNA polymerase subunit 5-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NRPB5L1 PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 2.914e-60 Identity = 98/206 (47.57%), Postives = 141/206 (68.45%), Query Frame = 0 Query: 5 DEEISRLYRIRKTVMHMLRDRGYLVGDFEINMSKHEF--KSSHGGENMKREDLDLNKSKKDNSSDQIYVFFPDEAKVGVKTMKTYTN-RMNNDNVYRAILVTQTNLTPFARTCVSEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 207
D+EI+R++++R+TV+ MLRDRGY + + ++N+ + EF + + +E L ++ +K N +D+IYVF+P+ KVGV +K +M +D V+R I+V +T AR VSE++ +EVF+EAEL+ NI EH+LV ++ VL D KK L+ YTV++TQLPRI VTDP+ARYYGLKRGQVVKI R T+ Y TYRF V
Sbjct: 5 DDEITRIFKVRRTVLQMLRDRGYTIEESDLNLKREEFVQRFCKTMNKVNKEALFVSANKGPNPADKIYVFYPEGPKVGVPVIKKEVAIKMRDDKVHRGIVVVPMAITAPARMAVSELNKMLTIEVFEEAELVTNITEHKLVNKYYVLDDQAKKKLLNTYTVQDTQLPRILVTDPLARYYGLKRGQVVKIRRSDATSLDYYTYRFAV 210
BLAST of PvulFLAVERTChr04.1003 vs. Araport11
Match: | (Symbols: ATRPABC24.3, NRPD5, NRPB5, RPB5A | "RNA POLYMERASE II FIFTH LARGEST SUBUNIT, A" | chr3:7891045-7892094 REVERSE LENGTH=205) HSP 1 Score: 338.576 bits (867), Expect = 1.083e-119 Identity = 159/206 (77.18%), Postives = 185/206 (89.81%), Query Frame = 0 Query: 2 VLTDEEISRLYRIRKTVMHMLRDRGYLVGDFEINMSKHEFKSSHGGENMKREDLDLNKSKKDNSSDQIYVFFPDEAKVGVKTMKTYTNRMNNDNVYRAILVTQTNLTPFARTCVSEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 207
+LT+EE+ RLYRI+KT+M MLRDRGY + D E+ M+K +F HG +NMKREDL K+K++++SDQ+Y+FFPDEAKVGVKTMK YTNRM ++NV+RAILV Q NLTPFARTC+SEISSKFHLEVFQEAE+LVNIKEH LVPEHQVLT EKKTL+ERYTVKETQLPRIQVTDP+ARY+GLKRGQVVKIIRPSETAGRYVTYR+VV
Sbjct: 1 MLTEEELKRLYRIQKTLMQMLRDRGYFIADSELTMTKQQFIRKHG-DNMKREDLVTLKAKRNDNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRGQVVKIIRPSETAGRYVTYRYVV 205
BLAST of PvulFLAVERTChr04.1003 vs. Araport11
Match: | (Symbols: RPB5C | "RNA polymerase II fifth largest subunit, C" | chr5:23469050-23469768 REVERSE LENGTH=210) HSP 1 Score: 190.66 bits (483), Expect = 3.039e-61 Identity = 98/206 (47.57%), Postives = 141/206 (68.45%), Query Frame = 0 Query: 5 DEEISRLYRIRKTVMHMLRDRGYLVGDFEINMSKHEF--KSSHGGENMKREDLDLNKSKKDNSSDQIYVFFPDEAKVGVKTMKTYTN-RMNNDNVYRAILVTQTNLTPFARTCVSEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 207
D+EI+R++++R+TV+ MLRDRGY + + ++N+ + EF + + +E L ++ +K N +D+IYVF+P+ KVGV +K +M +D V+R I+V +T AR VSE++ +EVF+EAEL+ NI EH+LV ++ VL D KK L+ YTV++TQLPRI VTDP+ARYYGLKRGQVVKI R T+ Y TYRF V
Sbjct: 5 DDEITRIFKVRRTVLQMLRDRGYTIEESDLNLKREEFVQRFCKTMNKVNKEALFVSANKGPNPADKIYVFYPEGPKVGVPVIKKEVAIKMRDDKVHRGIVVVPMAITAPARMAVSELNKMLTIEVFEEAELVTNITEHKLVNKYYVLDDQAKKKLLNTYTVQDTQLPRILVTDPLARYYGLKRGQVVKIRRSDATSLDYYTYRFAV 210
BLAST of PvulFLAVERTChr04.1003 vs. Araport11
Match: | (Symbols: RPB5D | "RNA polymerase II fifth largest subunit, D" | chr2:17229026-17230442 FORWARD LENGTH=218) HSP 1 Score: 139.043 bits (349), Expect = 5.342e-41 Identity = 78/201 (38.81%), Postives = 125/201 (62.19%), Query Frame = 0 Query: 7 EISRLYRIRKTVMHMLRDRGYLVGDFEINMSKHEFKSSHGGENMKREDLDLNKSKKDNSSDQIYVFFPDEAKVGVKTMKTYT-NRMNNDNVYRAILVTQTNLTPFARTCVSEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFV 206
E + Y R+T M MLRDRGY V D +IN+S +F++ +G E+ + L ++ + +SS +I V F V V M+ + ++ +N+ ILV Q+++T A V S F +E+F+ +LLVN+ +H L P+HQVL D EK++L+++++++E QLPR+ DP+ RYYGL+ GQV+K+ E + +VTYR V
Sbjct: 20 ECHKYYLARRTTMEMLRDRGYDVSDEDINLSLQQFRALYG-EHPDVDLLRISAKHRFDSSKKISVVFCGTGIVKVNAMRVIAADVLSRENITGLILVLQSHITNQALKAVELFS--FKVELFEITDLLVNVSKHVLRPKHQVLNDKEKESLLKKFSIEEKQLPRLSSKDPIVRYYGLETGQVMKVTYKDELSESHVTYRCV 217
BLAST of PvulFLAVERTChr04.1003 vs. Araport11
Match: | (Symbols: RPB5B, DMS12, NRPE5 | "RNA POLYMERASE II FIFTH LARGEST SUBUNIT, B", DEFECTIVE IN MERISTEM SILENCING 12 | chr3:21125878-21127470 FORWARD LENGTH=222) HSP 1 Score: 136.346 bits (342), Expect = 6.903e-40 Identity = 77/208 (37.02%), Postives = 126/208 (60.58%), Query Frame = 0 Query: 3 LTDEEISRLYRIRKTVMHMLRDRGYLVGDFEINMSKHEFKSSHGGENMKREDLD---LNKSKKDNSSDQIYVFFPDEAKVGVKTMKTY-TNRMNNDNVYRAILVTQTNLTPFARTCVSEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFV 206
L+ EE R Y R+ + MLRDRGY V D +IN+S H+F++ +G +R D+D ++ + +S+ ++ + F + V V +++ + ++ + + ILV Q ++T A + S F +E+FQ +LLVNI +H L P+HQVL D EK TL+++++++E QLPRI D + RYYGL++GQVVK+ E +V +R V
Sbjct: 20 LSSEESHRYYLARRNGLQMLRDRGYEVSDEDINLSLHDFRTVYG----ERPDVDRLRISALHRSDSTKKVKIVFFGTSMVKVNAIRSVVADILSQETITGLILVLQNHVTNQALKAIELFS--FKVEIFQITDLLVNITKHSLKPQHQVLNDEEKTTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELTESHVAFRCV 221
BLAST of PvulFLAVERTChr04.1003 vs. Araport11
Match: | (Symbols: RPB5E | "RNA polymerase II fifth largest subunit, E" | chr3:20173673-20175297 FORWARD LENGTH=233) HSP 1 Score: 114.005 bits (284), Expect = 4.565e-31 Identity = 70/202 (34.65%), Postives = 112/202 (55.45%), Query Frame = 0 Query: 7 EISRLYRIRKTVMHMLRDRGYLVGDFEINMSKHEFKSSHGGENMKREDLDLNKSKKDNSSDQIYVFFPDEAKVGVKTMKT-YTNRMNNDNVYRAILVTQTNLTPFARTCVSEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 207
E R Y R T MLRDRGY V + E++++ EF+S G E + E L + + + +I V F + VK+++ + NN ++ ILV Q+ + FA+ ++ + F +E F +LLVNI +H P+ ++L EK+ L+ ++ +++ QLP +Q D RYYGLK+ QVVKI E G +VTYR ++
Sbjct: 35 ESKRFYLARTTAFEMLRDRGYEVNEAELSLTLSEFRSVFG-EKPELERLRICVPLRSDPKKKILVVFMGTEPITVKSVRALHIQISNNVGLHAMILVLQSKMNHFAQKALT--TFPFTVETFPIEDLLVNITKHIQQPKIEILNKEEKEQLLRKHALEDKQLPYLQEKDSFVRYYGLKKKQVVKITYSKEPVGDFVTYRCII 233
BLAST of PvulFLAVERTChr04.1003 vs. Araport11
Match: | (Symbols: RPB5D | "RNA polymerase II fifth largest subunit, D" | chr2:17229026-17230293 FORWARD LENGTH=200) HSP 1 Score: 97.4413 bits (241), Expect = 4.412e-25 Identity = 60/177 (33.90%), Postives = 105/177 (59.32%), Query Frame = 0 Query: 7 EISRLYRIRKTVMHMLRDRGYLVGDFEINMSKHEFKSSHGGENMKREDLDLNKSKKDNSSDQIYVFFPDEAKVGVKTMKTYT-NRMNNDNVYRAILVTQTNLTPFARTCVSEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGL 182
E + Y R+T M MLRDRGY V D +IN+S +F++ +G E+ + L ++ + +SS +I V F V V M+ + ++ +N+ ILV Q+++T A V S F +E+F+ +LLVN+ +H L P+HQVL D EK++L+++++++E Q V++++G+
Sbjct: 20 ECHKYYLARRTTMEMLRDRGYDVSDEDINLSLQQFRALYG-EHPDVDLLRISAKHRFDSSKKISVVFCGTGIVKVNAMRVIAADVLSRENITGLILVLQSHITNQALKAVELFS--FKVELFEITDLLVNVSKHVLRPKHQVLNDKEKESLLKKFSIEEKQ---------VSKFFGI 184
BLAST of PvulFLAVERTChr04.1003 vs. Araport11
Match: | (Symbols: RPB5D | "RNA polymerase II fifth largest subunit, D" | chr2:17229026-17230316 FORWARD LENGTH=182) HSP 1 Score: 95.9005 bits (237), Expect = 1.109e-24 Identity = 58/161 (36.02%), Postives = 98/161 (60.87%), Query Frame = 0 Query: 7 EISRLYRIRKTVMHMLRDRGYLVGDFEINMSKHEFKSSHGGENMKREDLDLNKSKKDNSSDQIYVFFPDEAKVGVKTMKTYT-NRMNNDNVYRAILVTQTNLTPFARTCVSEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQ 166
E + Y R+T M MLRDRGY V D +IN+S +F++ +G E+ + L ++ + +SS +I V F V V M+ + ++ +N+ ILV Q+++T A V S F +E+F+ +LLVN+ +H L P+HQVL D EK++L+++++++E Q
Sbjct: 20 ECHKYYLARRTTMEMLRDRGYDVSDEDINLSLQQFRALYG-EHPDVDLLRISAKHRFDSSKKISVVFCGTGIVKVNAMRVIAADVLSRENITGLILVLQSHITNQALKAVELFS--FKVELFEITDLLVNVSKHVLRPKHQVLNDKEKESLLKKFSIEEKQ 177
BLAST of PvulFLAVERTChr04.1003 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:5683697-5684130 FORWARD LENGTH=87) HSP 1 Score: 76.6406 bits (187), Expect = 2.458e-18 Identity = 38/79 (48.10%), Postives = 53/79 (67.09%), Query Frame = 0 Query: 84 MKTYTNRMNNDNVYRAILVTQTNLTPFARTCV---SEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIER 159
MK Y +++ + NV+RAILV Q ++ F+R + + FH+EVFQE EL+VN+KEH VPEHQ LT EK+ +ER
Sbjct: 1 MKKYIDQLKSANVFRAILVVQ-DIKAFSRQALVFLGAVYPIFHIEVFQEKELIVNVKEHVFVPEHQALTTEEKQKFLER 78 The following BLAST results are available for this feature:
BLAST of PvulFLAVERTChr04.1003 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of PvulFLAVERTChr04.1003 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of PvulFLAVERTChr04.1003 vs. Araport11
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs arabidopsis Araport11) Total hits: 8 Position : 0 Zoom : x 1
InterPro
Analysis Name: Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL
Date Performed: 2024-08-19
Analysis Name: InterProScan Analysis for Phaseolus vulgaris cv. Flavert genome v1.0 Date Performed: 2024-08-19 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr04.1003 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr04.1003; Name=PvulFLAVERTChr04.1003; organism=Phaseolus vulgaris; type=mRNA; length=905bpback to top protein sequence of drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr04.1003 >drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr04.1003 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr04.1003; Name=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr04.1003; organism=Phaseolus vulgaris; type=polypeptide; length=207bpback to top mRNA from alignment at Chr04:53001854..53003530+ Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr04.1003 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr04.1003; Name=PvulFLAVERTChr04.1003; organism=Phaseolus vulgaris; type=mRNA; length=1677bp; location=Sequence derived from: Chr04:53001854..53003530+ (Phaseolus vulgarisback to top Coding sequence (CDS) from alignment at Chr04:53001854..53003530+ >drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr04.1003 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr04.1003; Name=PvulFLAVERTChr04.1003; organism=Phaseolus vulgaris; type=CDS; length=624bp; location=Sequence derived from: Chr04:53001854..53003530+ (Phaseolus vulgarisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|