PvulFLAVERTChr05.809

Transcript Overview
NamePvulFLAVERTChr05.809
Unique NamedrPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.809
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Sequence length663
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr05chromosomeChr05:40291263..40292640 +Phaseolus vulgaris cv. Flavert genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
anpvfL0140Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvfL0334Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvfL0693Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvfL0817Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvfL0913Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvfL1072Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvfL1079Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvfL1200Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvfL1261Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvfL1340Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvfL1425Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carpvfL053Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccapvfL122Cajanus cajan cv. Asha genome v2.0Cajanus cajan
carpvfL239Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
pspvfL246Pisum sativum Cameor genome v1aPisum sativum
carpvfL346Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccapvfL284Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvfL387Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pspvfL486Pisum sativum Cameor genome v1aPisum sativum
pspvfL491Pisum sativum Cameor genome v1aPisum sativum
ccapvfL487Cajanus cajan cv. Asha genome v2.0Cajanus cajan
carpvfL613Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
pspvfL863Pisum sativum Cameor genome v1aPisum sativum
pvfpvfL025Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfpvfL125Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfL026Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvpvfL159Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvfvfhR453Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvfvrvR401Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvfvrvR411Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvfvfhR476Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvfvfhR494Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvfvfhR497Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvfvfhR505Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvfvssR473Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvfvssR495Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvfvuR403Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvfvuR412Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvfvssR520Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvfvuR422Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvpvfL457Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvpvfL563Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
rna-XM_014668132.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vfaba.Hedin2.R1.1g061320.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Cc_v2.0_23781.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
jg7673.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Hedin2.R1.3g038920.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
evm.Ca_v2.0_18833Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
rna-XM_014640565.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Cc_v2.0_09590.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-TanjilR_17077Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun05g233800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Psat5g259520.1Pisum sativum Cameor genome v1aPisum sativum
evm.Ca_v2.0_02253Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Vigun11g123400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun01g177600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-TanjilR_23671Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Hedin2.R1.6g020800.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
evm.Ca_v2.0_07843Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
jg31677.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Phvul.011G097300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
PvulFLAVERTChr01.1247Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Phvul.005G121200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PvulFLAVERTChr05.809drPhaVulg.Flavert.1.0gene:PvulFLAVERTChr05.809Phaseolus vulgarisgene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0five_prime_UTR:PvulFLAVERTChr05.809.0drPhaVulg.Flavert.1.0five_prime_UTR:PvulFLAVERTChr05.809.0Phaseolus vulgarisfive_prime_UTR
drPhaVulg.Flavert.1.0five_prime_UTR:PvulFLAVERTChr05.809.2drPhaVulg.Flavert.1.0five_prime_UTR:PvulFLAVERTChr05.809.2Phaseolus vulgarisfive_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr05.809.utr0drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr05.809.utr0Phaseolus vulgarisexon
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr05.809.1drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr05.809.1Phaseolus vulgarisexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr05.809.1drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr05.809.1Phaseolus vulgarisCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0three_prime_UTR:PvulFLAVERTChr05.809.4drPhaVulg.Flavert.1.0three_prime_UTR:PvulFLAVERTChr05.809.4Phaseolus vulgaristhree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.809drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.809Phaseolus vulgarispolypeptide
drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.809drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.809-proteinPhaseolus vulgarispolypeptide


Homology
[Close]
BLAST of PvulFLAVERTChr05.809 vs. ExPASy TrEMBL (2024)
Match: tr|V7BZG6|V7BZG6_PHAVU (Rubredoxin-like domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G121300g PE=4 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 9.400e-70
Identity = 106/109 (97.25%), Postives = 106/109 (97.25%), Query Frame = 0 
Query:    1 MCKRKSPGLNLKVPSRPASPEFSSSSSGEWPELSCSSSSSSVSYSPKISLEEEEKVDGGNAPEAKAMDLVGCPRCFMYVMLSEKDPKCPKCNSTVFLEFFKHENFKTDN 109
            MCKRKSPGLNLKVPSR  SPEFSSSSSGEWPELSCSSSSSSVSYSPKISLEEEEKVDG NAPEAKAMDLVGCPRCFMYVMLSEKDPKCPKCNSTVFLEFFKHENFKTDN
Sbjct:    1 MCKRKSPGLNLKVPSRTTSPEFSSSSSGEWPELSCSSSSSSVSYSPKISLEEEEKVDGANAPEAKAMDLVGCPRCFMYVMLSEKDPKCPKCNSTVFLEFFKHENFKTDN 109
[Close]
BLAST of PvulFLAVERTChr05.809 vs. ExPASy TrEMBL (2024)
Match: tr|V7BYC1|V7BYC1_PHAVU (Rubredoxin-like domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G121200g PE=4 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 9.349e-58
Identity = 106/109 (97.25%), Postives = 107/109 (98.17%), Query Frame = 0 
Query:    1 MCKRKSPGLNLKVPSRPASPEFSSSSSGEWPELSCSSSSSSVSYSPKISLEEEEKVDGGNAPEAKAMDLVGCPRCFMYVMLSEKDPKCPKCNSTVFLEFFKHENFKTDN 109
            MCKRKSPGLNLKVPSRPASPEFSSSSSGEWPELSCSSSSSSVSYSPKISLEEEEKV G N+PEAKAMDLVGCPRCFMYVMLSEKDPKCPKCNSTVFLEFFKHENFKTDN
Sbjct:    1 MCKRKSPGLNLKVPSRPASPEFSSSSSGEWPELSCSSSSSSVSYSPKISLEEEEKVHGANSPEAKAMDLVGCPRCFMYVMLSEKDPKCPKCNSTVFLEFFKHENFKTDN 109
[Close]
BLAST of PvulFLAVERTChr05.809 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6N9A8|A0A4D6N9A8_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG10g712 PE=4 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.029e-41
Identity = 85/109 (77.98%), Postives = 90/109 (82.57%), Query Frame = 0 
Query:    1 MCKRKSPGLNLKVPSRPASPEFSSSSSGEWPELSCSSSSSSVSYSPKISLEEEEKVDGGNAPEAKAMDLVGCPRCFMYVMLSEKDPKCPKCNSTVFLEFFKHENFKTDN 109
            M KRKS G  LKV +RP SP FSSSSSGEWPE S SSS SSVSYSPK + EEEEKV G N  E KAMDLVGCPRCFM+VMLSE+DPKCPKC STVFLEFFKHE+ KTDN
Sbjct:    1 MRKRKSRGSELKVANRPTSPVFSSSSSGEWPEFSSSSSCSSVSYSPKFATEEEEKVHGENGEETKAMDLVGCPRCFMFVMLSEEDPKCPKCKSTVFLEFFKHESIKTDN 109
[Close]
BLAST of PvulFLAVERTChr05.809 vs. ExPASy TrEMBL (2024)
Match: tr|V7BVJ7|V7BVJ7_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G121400g PE=4 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.255e-40
Identity = 82/109 (75.23%), Postives = 86/109 (78.90%), Query Frame = 0 
Query:    1 MCKRKSPGLNLKVPSRPASPEFSSSSSGEWPELSCSSSSSSVSYSPKISLEEEEKVDGGNAPEAKAMDLVGCPRCFMYVMLSEKDPKCPKCNSTVFLEFFKHENFKTDN 109
            MCKRK     ++  SRP SPE           LS SSSSSSVSYSPK+ +EEEEKVDG NAPEAKAMDLVGCPRCFMYVMLSEKDPKCPKCNSTVFLEFFKHEN KTDN
Sbjct:    1 MCKRKKEESEMRQKSRPTSPE-----------LSSSSSSSSVSYSPKMPVEEEEKVDGANAPEAKAMDLVGCPRCFMYVMLSEKDPKCPKCNSTVFLEFFKHENIKTDN 98
[Close]
BLAST of PvulFLAVERTChr05.809 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3VX74|A0A1S3VX74_VIGRR (Uncharacterized protein LOC106779118 OS=Vigna radiata var. radiata OX=3916 GN=LOC106779118 PE=4 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.037e-39
Identity = 79/109 (72.48%), Postives = 87/109 (79.82%), Query Frame = 0 
Query:    1 MCKRKSPGLNLKVPSRPASPEFSSSSSGEWPELSCSSSSSSVSYSPKISLEEEEKVDGGNAPEAKAMDLVGCPRCFMYVMLSEKDPKCPKCNSTVFLEFFKHENFKTDN 109
            M KR+SPGL LKV SRP SP     SS EWPE S SSS SSVSYSPK+  EE+E+V   NA E KAMDLVGCPRCFM+VMLSE+DPKCPKC STVFL+FFKHE+ KTDN
Sbjct:    1 MRKRESPGLELKVASRPTSP----VSSCEWPEFSSSSSCSSVSYSPKLGTEEQEEVHSANAEETKAMDLVGCPRCFMFVMLSEEDPKCPKCKSTVFLQFFKHESIKTDN 105
[Close]
BLAST of PvulFLAVERTChr05.809 vs. ExPASy TrEMBL (2024)
Match: tr|I1M4A4|I1M4A4_SOYBN (Rubredoxin-like domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_13G314200 PE=4 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.505e-37
Identity = 83/121 (68.60%), Postives = 89/121 (73.55%), Query Frame = 0 
Query:    1 MCKRKSPGLNLKVPSRPASPEFSSSSS-GEWPELSCSSSSSSVS-YSPKISLE---------EEEKVDGGNA-PEAKAMDLVGCPRCFMYVMLSEKDPKCPKCNSTVFLEFFKHENFKTDN 109
            MCKRKSPG  L+ PSRP SPE SSS+S GEWPE S SS S+S + Y+ K+  E         EEE V   NA PE KAMDLVGCPRCFMYVMLSE DPKCPKC STVFLEFFK ENFKTDN
Sbjct:    1 MCKRKSPGSELRPPSRPTSPELSSSTSSGEWPEFSSSSPSASSASYTSKMPKEGICVYFPEAEEENVQRANAAPETKAMDLVGCPRCFMYVMLSEADPKCPKCKSTVFLEFFKAENFKTDN 121
[Close]
BLAST of PvulFLAVERTChr05.809 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445ICR4|A0A445ICR4_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_032332 PE=4 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.862e-36
Identity = 82/121 (67.77%), Postives = 89/121 (73.55%), Query Frame = 0 
Query:    1 MCKRKSPGLNLKVPSRPASPEFSSSSS-GEWPELSCSSSSSSVS-YSPKISLE---------EEEKVDGGNA-PEAKAMDLVGCPRCFMYVMLSEKDPKCPKCNSTVFLEFFKHENFKTDN 109
            MCKRKSPG  L++ SRP SPE SSS+S GEWPE S SS S+S + Y+ K+  E         EEE V   NA PE KAMDLVGCPRCFMYVMLSE DPKCPKC STVFLEFFK ENFKTDN
Sbjct:    1 MCKRKSPGSELRLTSRPTSPELSSSTSSGEWPEFSSSSPSASSASYTSKMPKEGICVFFPEAEEENVQRANAAPETKAMDLVGCPRCFMYVMLSEADPKCPKCKSTVFLEFFKAENFKTDN 121
[Close]
BLAST of PvulFLAVERTChr05.809 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SH32|A0A0S3SH32_PHAAN (Rubredoxin-like domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G077700 PE=4 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.469e-35
Identity = 81/109 (74.31%), Postives = 89/109 (81.65%), Query Frame = 0 
Query:    1 MCKRKSPGLNLKVPSRPASPEFSSSSSGEWPELSCSSSSSSVSYSPKISLEEEEKVDGGNAPEAKAMDLVGCPRCFMYVMLSEKDPKCPKCNSTVFLEFFKHENFKTDN 109
            M KRKSPG  LKV S P SP  SSSSSGEWPE S SSS SSVSYSPK++ EE+E+V   NA E KAMDLVGCPRCFM+VMLSE+DPKCPKC ST FL+FFKHE+ KTDN
Sbjct:    1 MRKRKSPGSELKVASGPTSPVSSSSSSGEWPEFSSSSSCSSVSYSPKLATEEQEEVHSANAEETKAMDLVGCPRCFMFVMLSEEDPKCPKCKSTAFLQFFKHESIKTDN 109
[Close]
BLAST of PvulFLAVERTChr05.809 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9UNA7|A0A0L9UNA7_PHAAN (Rubredoxin-like domain-containing protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0217160 PE=4 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.469e-35
Identity = 81/109 (74.31%), Postives = 89/109 (81.65%), Query Frame = 0 
Query:    1 MCKRKSPGLNLKVPSRPASPEFSSSSSGEWPELSCSSSSSSVSYSPKISLEEEEKVDGGNAPEAKAMDLVGCPRCFMYVMLSEKDPKCPKCNSTVFLEFFKHENFKTDN 109
            M KRKSPG  LKV S P SP  SSSSSGEWPE S SSS SSVSYSPK++ EE+E+V   NA E KAMDLVGCPRCFM+VMLSE+DPKCPKC ST FL+FFKHE+ KTDN
Sbjct:    1 MRKRKSPGSELKVASGPTSPVSSSSSSGEWPEFSSSSSCSSVSYSPKLATEEQEEVHSANAEETKAMDLVGCPRCFMFVMLSEEDPKCPKCKSTAFLQFFKHESIKTDN 109
[Close]
BLAST of PvulFLAVERTChr05.809 vs. ExPASy TrEMBL (2024)
Match: tr|I1LTY3|I1LTY3_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_12G187100 PE=4 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.233e-33
Identity = 74/113 (65.49%), Postives = 79/113 (69.91%), Query Frame = 0 
Query:    1 MCKRKSPGLNLKVPSRPASP-EFSSSSSGEWPE--LSCSSSSSSVSYSPKISLEEEEKVDGGNA-PEAKAMDLVGCPRCFMYVMLSEKDPKCPKCNSTVFLEFFKHENFKTDN 109
            MCKRK P   L+ P+ P SP E   SSSGE PE     S  SSSVS S KI +E+EE V   NA PE KAMDLVGCPRCFMYVMLSE DPKCPKC +TVFLE FK ENF  DN
Sbjct:    1 MCKRKGPSSELRQPNMPTSPPEVVESSSGELPEEFSWSSCLSSSVSSSSKIPIEDEENVQRANASPETKAMDLVGCPRCFMYVMLSEVDPKCPKCKTTVFLELFKDENFNPDN 113
[Close]
BLAST of PvulFLAVERTChr05.809 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FNI1|GIR1_ARATH (Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.162e-17
Identity = 33/53 (62.26%), Postives = 38/53 (71.70%), Query Frame = 0 
Query:   51 EEEEKVDGGNAPEAKAMDLVGCPRCFMYVMLSEKDPKCPKCNSTVFLEFFKHE 103
            ++E  V    +PE  +M LVGCPRC MYVMLSE DPKCPKC STV L+F  HE
Sbjct:   50 QDEPSVRYSTSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFL-HE 101
[Close]
BLAST of PvulFLAVERTChr05.809 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SRN4|GIR2_ARATH (Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 2.390e-14
Identity = 41/99 (41.41%), Postives = 54/99 (54.55%), Query Frame = 0 
Query:    4 RKSPGLNLKVPSRPASPEFSSSSSGEWPELSCSSSSSSVSYSPKISLEEEEKVDGGNAPEAKAMDLVGCPRCFMYVMLSEKDPKCPKCNSTVFLEFFKH 102
            +  P L L++   P   + S  S    P  S ++S SS   S + + EE E +         +M LVGCPRC MYVMLS+ DPKCPKC STV L+F + 
Sbjct:    6 KNGPKLELRLNLSPPPSQASQMSLVRSPNRSNTTSPSSC-VSSETNQEENETIT--------SMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQE 95
[Close]
BLAST of PvulFLAVERTChr05.809 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FMS4|SIED1_ARATH (Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 GN=SIED1 PE=1 SV=1)

HSP 1 Score: 52.7582 bits (125), Expect = 3.352e-9
Identity = 21/37 (56.76%), Postives = 28/37 (75.68%), Query Frame = 0 
Query:   65 KAMDLVGCPRCFMYVMLS-EKDPKCPKCNSTVFLEFF 100
            K+M +VGCP C MY++ S E DP+CP+CNS V L+F 
Sbjct:   47 KSMVVVGCPNCIMYIITSLENDPRCPRCNSHVLLDFL 83
[Close]
BLAST of PvulFLAVERTChr05.809 vs. Araport11
Match: | (Symbols: GIR1 | | chr5:1912895-1913263 FORWARD LENGTH=122)

HSP 1 Score: 73.559 bits (179), Expect = 6.384e-18
Identity = 33/53 (62.26%), Postives = 38/53 (71.70%), Query Frame = 0 
Query:   51 EEEEKVDGGNAPEAKAMDLVGCPRCFMYVMLSEKDPKCPKCNSTVFLEFFKHE 103
            ++E  V    +PE  +M LVGCPRC MYVMLSE DPKCPKC STV L+F  HE
Sbjct:   50 QDEPSVRYSTSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFL-HE 101
[Close]
BLAST of PvulFLAVERTChr05.809 vs. Araport11
Match: | (Symbols: GIR1 | | chr5:1912895-1913263 FORWARD LENGTH=122)

HSP 1 Score: 73.559 bits (179), Expect = 6.384e-18
Identity = 33/53 (62.26%), Postives = 38/53 (71.70%), Query Frame = 0 
Query:   51 EEEEKVDGGNAPEAKAMDLVGCPRCFMYVMLSEKDPKCPKCNSTVFLEFFKHE 103
            ++E  V    +PE  +M LVGCPRC MYVMLSE DPKCPKC STV L+F  HE
Sbjct:   50 QDEPSVRYSTSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFL-HE 101
[Close]
BLAST of PvulFLAVERTChr05.809 vs. Araport11
Match: | (Symbols: GIR2 | | chr3:3667337-3667690 FORWARD LENGTH=117)

HSP 1 Score: 66.6254 bits (161), Expect = 2.473e-15
Identity = 41/99 (41.41%), Postives = 54/99 (54.55%), Query Frame = 0 
Query:    4 RKSPGLNLKVPSRPASPEFSSSSSGEWPELSCSSSSSSVSYSPKISLEEEEKVDGGNAPEAKAMDLVGCPRCFMYVMLSEKDPKCPKCNSTVFLEFFKH 102
            +  P L L++   P   + S  S    P  S ++S SS   S + + EE E +         +M LVGCPRC MYVMLS+ DPKCPKC STV L+F + 
Sbjct:    6 KNGPKLELRLNLSPPPSQASQMSLVRSPNRSNTTSPSSC-VSSETNQEENETIT--------SMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQE 95
[Close]
BLAST of PvulFLAVERTChr05.809 vs. Araport11
Match: | (Symbols: SIED1 | Salt-Induced and EIN3/EIL1-Dependent 1 | chr5:7372487-7372768 REVERSE LENGTH=93)

HSP 1 Score: 52.7582 bits (125), Expect = 3.466e-10
Identity = 21/37 (56.76%), Postives = 28/37 (75.68%), Query Frame = 0 
Query:   65 KAMDLVGCPRCFMYVMLS-EKDPKCPKCNSTVFLEFF 100
            K+M +VGCP C MY++ S E DP+CP+CNS V L+F 
Sbjct:   47 KSMVVVGCPNCIMYIITSLENDPRCPRCNSHVLLDFL 83
The following BLAST results are available for this feature:
BLAST of PvulFLAVERTChr05.809 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|V7BZG6|V7BZG6_PHAVU9.400e-7097.25Rubredoxin-like domain-containing protein OS=Phase... [more]
tr|V7BYC1|V7BYC1_PHAVU9.349e-5897.25Rubredoxin-like domain-containing protein OS=Phase... [more]
tr|A0A4D6N9A8|A0A4D6N9A8_VIGUN1.029e-4177.98Uncharacterized protein OS=Vigna unguiculata OX=39... [more]
tr|V7BVJ7|V7BVJ7_PHAVU4.255e-4075.23Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|A0A1S3VX74|A0A1S3VX74_VIGRR1.037e-3972.48Uncharacterized protein LOC106779118 OS=Vigna radi... [more]
tr|I1M4A4|I1M4A4_SOYBN7.505e-3768.60Rubredoxin-like domain-containing protein OS=Glyci... [more]
tr|A0A445ICR4|A0A445ICR4_GLYSO1.862e-3667.77Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|A0A0S3SH32|A0A0S3SH32_PHAAN3.469e-3574.31Rubredoxin-like domain-containing protein OS=Vigna... [more]
tr|A0A0L9UNA7|A0A0L9UNA7_PHAAN3.469e-3574.31Rubredoxin-like domain-containing protein OS=Phase... [more]
tr|I1LTY3|I1LTY3_SOYBN4.233e-3365.49Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
back to top
BLAST of PvulFLAVERTChr05.809 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
sp|Q9FNI1|GIR1_ARATH6.162e-1762.26Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis... [more]
sp|Q9SRN4|GIR2_ARATH2.390e-1441.41Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis... [more]
sp|Q9FMS4|SIED1_ARATH3.352e-956.76Protein salt-induced and EIN3/EIL1-dependent 1 OS=... [more]
back to top
BLAST of PvulFLAVERTChr05.809 vs. Araport11
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs arabidopsis Araport11)
Total hits: 4
Match NameE-valueIdentityDescription
|6.384e-1862.26Symbols: GIR1 | | chr5:1912895-1913263 FORWARD LE... [more]
|6.384e-1862.26Symbols: GIR1 | | chr5:1912895-1913263 FORWARD LE... [more]
|2.473e-1541.41Symbols: GIR2 | | chr3:3667337-3667690 FORWARD LE... [more]
|3.466e-1056.76Symbols: SIED1 | Salt-Induced and EIN3/EIL1-Depend... [more]
back to top
InterPro
Analysis Name: Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL
Date Performed: 2024-08-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33177PUTATIVE-RELATEDcoord: 11..106

Analysis Name: InterProScan Analysis for Phaseolus vulgaris cv. Flavert genome v1.0
Date Performed: 2024-08-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33177PUTATIVE-RELATEDcoord: 11..106

Sequences
The following sequences are available for this feature:

mRNA sequence

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.809 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.809; Name=PvulFLAVERTChr05.809; organism=Phaseolus vulgaris; type=mRNA; length=663bp
AACTAGATTGTACAATATGCTGCCGTTTCTCTGCCGGATGATACGATTGT
GATGCATCCACTCAGTGATCCATCCGCTTAACAATTCTAGTTCTTGTCGC
CACCAACTGCTTCTTTTatttcgaAGTCGGAGTTAGAGGAAGAGTTAGTT
TGGTTGGAAAAGGTTTAAGAAGATGTGCAAAAGAAAGAGTCCAGGGTTGA
ATTTGAAGGTTCCGAGCAGGCCAGCATCGCCGGAGTTCTCTTCGTCATCA
TCAGGTGAATGGCCAGAGTTATCTTGTTCATCGTCATCTTCTTCAGTATC
ATATTCACCAAAGATTTCACTTGAGGAGGAAGAGAAGGTGGATGGTGGAA
ATGCTCCAGAAGCAAAGGCCATGGATCTGGTTGGTTGTCCTCGATGCTTC
ATGTACGTGATGTTATCAGAGAAGGATCCAAAGTGCCCTAAATGCAATAG
CACAGTTTTTCTCGAGTTTTTCAAACATGAAAACTTCAAGACAGACAACT
GAGTCATGGTGAGAAGAATTTTTAGGAATTAAATAAAATCCTCACATGCT
TCAGGATGTTCCATCGTTTCTTTATTTTACCCatgttgtttaattttaaa
ttctgaAAGTTTATCGTGTTGCGTAAATAAAGTTATATAATCAtctactc
tctttttttcttt
back to top

protein sequence of drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.809

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.809 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.809; Name=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.809; organism=Phaseolus vulgaris; type=polypeptide; length=109bp
MCKRKSPGLNLKVPSRPASPEFSSSSSGEWPELSCSSSSSSVSYSPKISL
EEEEKVDGGNAPEAKAMDLVGCPRCFMYVMLSEKDPKCPKCNSTVFLEFF
KHENFKTDN
back to top

mRNA from alignment at Chr05:40291263..40292640+

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.809 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.809; Name=PvulFLAVERTChr05.809; organism=Phaseolus vulgaris; type=mRNA; length=1378bp; location=Sequence derived from: Chr05:40291263..40292640+ (Phaseolus vulgaris
AACTAGATTGTACAATATGCTGCCGTTTCTCTGCCGGATGATACGATTGT
GATGCATCCACTCAGTGATCCATCCGCTTAACAATTCTAGTTCTTGTCGC
CACCAACTGCTTCTTTTGTTAGTTATTCTCATATTTACTTCACTTCTACA
GCTTTTCTATattaaccaatttttttattcgTTTTCTGCAATGCTACTCC
TTACTCAAACCATAAAGGTGACAATAAACCCACAAAAACCCTTGTTGGTT
GTTATAGAACCCTGcataaaaattttatttgacGCCAAATTTATTATACA
TATAGCACAACGAGGTTGGATGTAGATCTAAATGCTAGCTATCCCTCTAA
TGGACACCCATGTCAACTCTGCTGCCCACCCTATATTCTGTCATTCTATA
TATATGCTATATTTTGGTTTGTCTAGTTCCATACTTCCCTTTATTGTGTA
CCGACAATAGATTTTTACACTTTGATTTACTAACTTAATTTTGATCTTAA
GGAACATGAtatctttttgtgattttgtaTCTTAGTTCTTggttttaaat
ctctttctggGACCGCAGTTTTGACTGCAACACCATGTTTCTTGCGTAAC
CACACCTGCAACTGCAATTGCAATTATGACAGTATTCACCGTGTTTATCT
TCAAACgtaacaaaaaaacaaacaacTGTGAAGACAATTTAGAACGTTTT
TGGAGTTATGTGAAATGACTTGCAAATTGCTGTTAGTTCGATTAGTGCGT
AATTGATTTGACTAAGGTTGAAAATACTGGTGAAAGTGATTTTGTTTAGA
AGTTAAGGTTATTATTTcttgaaaatgaacagatttcgaAGTCGGAGTTA
GAGGAAGAGTTAGTTTGGTTGGAAAAGGTTTAAGAAGATGTGCAAAAGAA
AGAGTCCAGGGTTGAATTTGAAGGTTCCGAGCAGGCCAGCATCGCCGGAG
TTCTCTTCGTCATCATCAGGTGAATGGCCAGAGTTATCTTGTTCATCGTC
ATCTTCTTCAGTATCATATTCACCAAAGATTTCACTTGAGGAGGAAGAGA
AGGTGGATGGTGGAAATGCTCCAGAAGCAAAGGCCATGGATCTGGTTGGT
TGTCCTCGATGCTTCATGTACGTGATGTTATCAGAGAAGGATCCAAAGTG
CCCTAAATGCAATAGCACAGTTTTTCTCGAGTTTTTCAAACATGAAAACT
TCAAGACAGACAACTGAGTCATGGTGAGAAGAATTTTTAGGAATTAAATA
AAATCCTCACATGCTTCAGGATGTTCCATCGTTTCTTTATTTTACCCatg
ttgtttaattttaaattctgaAAGTTTATCGTGTTGCGTAAATAAAGTTA
TATAATCAtctactctctttttttcttt
back to top

Coding sequence (CDS) from alignment at Chr05:40291263..40292640+

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.809 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.809; Name=PvulFLAVERTChr05.809; organism=Phaseolus vulgaris; type=CDS; length=330bp; location=Sequence derived from: Chr05:40291263..40292640+ (Phaseolus vulgaris
ATGTGCAAAAGAAAGAGTCCAGGGTTGAATTTGAAGGTTCCGAGCAGGCC
AGCATCGCCGGAGTTCTCTTCGTCATCATCAGGTGAATGGCCAGAGTTAT
CTTGTTCATCGTCATCTTCTTCAGTATCATATTCACCAAAGATTTCACTT
GAGGAGGAAGAGAAGGTGGATGGTGGAAATGCTCCAGAAGCAAAGGCCAT
GGATCTGGTTGGTTGTCCTCGATGCTTCATGTACGTGATGTTATCAGAGA
AGGATCCAAAGTGCCCTAAATGCAATAGCACAGTTTTTCTCGAGTTTTTC
AAACATGAAAACTTCAAGACAGACAACTGA
back to top